Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0996170 | XP_024641737.1 | 89.388 | 245 | 12 | 1 | 1 | 231 | 518 | 762 | 1.74e-149 | 444 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0996170 | sp|Q9LDR2|CNG19_ARATH | 62.025 | 237 | 76 | 2 | 1 | 225 | 492 | 726 | 1.46e-96 | 300 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0996170 | A0A396HMA0 | 89.388 | 245 | 12 | 1 | 1 | 231 | 518 | 762 | 8.30e-150 | 444 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006070 | Msa0996170 | 0.805125 | 1.552770e-49 | -8.615850e-47 |
| Msa0012040 | Msa0996170 | 0.826950 | 2.047256e-54 | -8.615850e-47 |
| Msa0013050 | Msa0996170 | -0.826057 | 3.343173e-54 | -8.615850e-47 |
| Msa0013290 | Msa0996170 | 0.808492 | 3.015534e-50 | -8.615850e-47 |
| Msa0014710 | Msa0996170 | 0.832092 | 1.151179e-55 | -8.615850e-47 |
| Msa0015460 | Msa0996170 | 0.811979 | 5.338604e-51 | -8.615850e-47 |
| Msa0028660 | Msa0996170 | 0.826604 | 2.476547e-54 | -8.615850e-47 |
| Msa0037880 | Msa0996170 | 0.813022 | 3.158011e-51 | -8.615850e-47 |
| Msa0039330 | Msa0996170 | 0.831011 | 2.126077e-55 | -8.615850e-47 |
| Msa0054260 | Msa0996170 | 0.800555 | 1.364521e-48 | -8.615850e-47 |
| Msa0081930 | Msa0996170 | 0.809570 | 1.773058e-50 | -8.615850e-47 |
| Msa0085290 | Msa0996170 | 0.812874 | 3.403125e-51 | -8.615850e-47 |
| Msa0094920 | Msa0996170 | 0.801058 | 1.077012e-48 | -8.615850e-47 |
| Msa0096030 | Msa0996170 | 0.813883 | 2.042774e-51 | -8.615850e-47 |
| Msa0100000 | Msa0996170 | 0.806585 | 7.660368e-50 | -8.615850e-47 |
| Msa0100080 | Msa0996170 | 0.806178 | 9.332248e-50 | -8.615850e-47 |
| Msa0100090 | Msa0996170 | 0.829291 | 5.587565e-55 | -8.615850e-47 |
| Msa0106520 | Msa0996170 | 0.811701 | 6.138884e-51 | -8.615850e-47 |
| Msa0109590 | Msa0996170 | 0.800690 | 1.280216e-48 | -8.615850e-47 |
| Msa0115270 | Msa0996170 | 0.843989 | 9.976878e-59 | -8.615850e-47 |
| Msa0115390 | Msa0996170 | 0.819830 | 9.449055e-53 | -8.615850e-47 |
| Msa0119850 | Msa0996170 | 0.802583 | 5.237385e-49 | -8.615850e-47 |
| Msa0607540 | Msa0996170 | 0.808256 | 3.386348e-50 | -8.615850e-47 |
| Msa0608710 | Msa0996170 | 0.817713 | 2.859276e-52 | -8.615850e-47 |
| Msa0610430 | Msa0996170 | 0.825065 | 5.742257e-54 | -8.615850e-47 |
| Msa0620620 | Msa0996170 | 0.800175 | 1.630588e-48 | -8.615850e-47 |
| Msa0620960 | Msa0996170 | 0.818323 | 2.081817e-52 | -8.615850e-47 |
| Msa0621490 | Msa0996170 | 0.818338 | 2.065556e-52 | -8.615850e-47 |
| Msa0621590 | Msa0996170 | 0.807010 | 6.226834e-50 | -8.615850e-47 |
| Msa0621790 | Msa0996170 | 0.800120 | 1.672537e-48 | -8.615850e-47 |
| Msa0623080 | Msa0996170 | 0.844790 | 6.077865e-59 | -8.615850e-47 |
| Msa0626850 | Msa0996170 | 0.802638 | 5.101381e-49 | -8.615850e-47 |
| Msa0638070 | Msa0996170 | 0.804663 | 1.938778e-49 | -8.615850e-47 |
| Msa0641670 | Msa0996170 | 0.828127 | 1.068469e-54 | -8.615850e-47 |
| Msa0647830 | Msa0996170 | 0.803611 | 3.210222e-49 | -8.615850e-47 |
| Msa0649350 | Msa0996170 | 0.832863 | 7.415600e-56 | -8.615850e-47 |
| Msa0654010 | Msa0996170 | 0.816584 | 5.128583e-52 | -8.615850e-47 |
| Msa0660300 | Msa0996170 | 0.831850 | 1.321553e-55 | -8.615850e-47 |
| Msa0661190 | Msa0996170 | -0.824608 | 7.360308e-54 | -8.615850e-47 |
| Msa0664970 | Msa0996170 | 0.824285 | 8.768589e-54 | -8.615850e-47 |
| Msa0673460 | Msa0996170 | 0.824539 | 7.642943e-54 | -8.615850e-47 |
| Msa0679550 | Msa0996170 | 0.814724 | 1.331337e-51 | -8.615850e-47 |
| Msa0688480 | Msa0996170 | 0.802783 | 4.762909e-49 | -8.615850e-47 |
| Msa0689010 | Msa0996170 | 0.829515 | 4.930010e-55 | -8.615850e-47 |
| Msa0693380 | Msa0996170 | 0.803536 | 3.327212e-49 | -8.615850e-47 |
| Msa0715410 | Msa0996170 | 0.822808 | 1.943056e-53 | -8.615850e-47 |
| Msa0716840 | Msa0996170 | 0.820990 | 5.120230e-53 | -8.615850e-47 |
| Msa0731180 | Msa0996170 | 0.811690 | 6.172867e-51 | -8.615850e-47 |
| Msa0742150 | Msa0996170 | 0.800219 | 1.596820e-48 | -8.615850e-47 |
| Msa0743260 | Msa0996170 | 0.816469 | 5.441784e-52 | -8.615850e-47 |
| Msa0743720 | Msa0996170 | 0.810876 | 9.266392e-51 | -8.615850e-47 |
| Msa0773840 | Msa0996170 | 0.836576 | 8.631058e-57 | -8.615850e-47 |
| Msa0782490 | Msa0996170 | 0.814593 | 1.423428e-51 | -8.615850e-47 |
| Msa0784860 | Msa0996170 | 0.808350 | 3.234284e-50 | -8.615850e-47 |
| Msa0792090 | Msa0996170 | 0.800517 | 1.388917e-48 | -8.615850e-47 |
| Msa0793380 | Msa0996170 | 0.814130 | 1.801732e-51 | -8.615850e-47 |
| Msa0795720 | Msa0996170 | 0.805012 | 1.639329e-49 | -8.615850e-47 |
| Msa0804230 | Msa0996170 | 0.807981 | 3.875149e-50 | -8.615850e-47 |
| Msa0808080 | Msa0996170 | 0.803049 | 4.195927e-49 | -8.615850e-47 |
| Msa0808270 | Msa0996170 | 0.802660 | 5.048206e-49 | -8.615850e-47 |
| Msa0820850 | Msa0996170 | 0.823997 | 1.024648e-53 | -8.615850e-47 |
| Msa0826760 | Msa0996170 | 0.818948 | 1.501213e-52 | -8.615850e-47 |
| Msa0833460 | Msa0996170 | 0.811855 | 5.680732e-51 | -8.615850e-47 |
| Msa0129190 | Msa0996170 | -0.800332 | 1.514836e-48 | -8.615850e-47 |
| Msa0130520 | Msa0996170 | 0.800393 | 1.472241e-48 | -8.615850e-47 |
| Msa0135380 | Msa0996170 | 0.817362 | 3.430044e-52 | -8.615850e-47 |
| Msa0140390 | Msa0996170 | 0.808975 | 2.378205e-50 | -8.615850e-47 |
| Msa0141250 | Msa0996170 | 0.809952 | 1.467283e-50 | -8.615850e-47 |
| Msa0148120 | Msa0996170 | 0.803133 | 4.030896e-49 | -8.615850e-47 |
| Msa0152170 | Msa0996170 | 0.821932 | 3.104395e-53 | -8.615850e-47 |
| Msa0160550 | Msa0996170 | 0.811196 | 7.901714e-51 | -8.615850e-47 |
| Msa0172780 | Msa0996170 | 0.826841 | 2.174135e-54 | -8.615850e-47 |
| Msa0173990 | Msa0996170 | 0.828566 | 8.373601e-55 | -8.615850e-47 |
| Msa0178930 | Msa0996170 | 0.804074 | 2.571980e-49 | -8.615850e-47 |
| Msa0178960 | Msa0996170 | 0.806954 | 6.401489e-50 | -8.615850e-47 |
| Msa0178970 | Msa0996170 | 0.802983 | 4.330868e-49 | -8.615850e-47 |
| Msa0180500 | Msa0996170 | 0.812333 | 4.470465e-51 | -8.615850e-47 |
| Msa0182570 | Msa0996170 | 0.803443 | 3.477723e-49 | -8.615850e-47 |
| Msa0197660 | Msa0996170 | 0.845200 | 4.709944e-59 | -8.615850e-47 |
| Msa0212310 | Msa0996170 | 0.820529 | 6.537790e-53 | -8.615850e-47 |
| Msa0220580 | Msa0996170 | 0.800237 | 1.583839e-48 | -8.615850e-47 |
| Msa0223010 | Msa0996170 | 0.817834 | 2.684049e-52 | -8.615850e-47 |
| Msa0223410 | Msa0996170 | -0.815860 | 7.445228e-52 | -8.615850e-47 |
| Msa0225470 | Msa0996170 | 0.801356 | 9.359597e-49 | -8.615850e-47 |
| Msa0365490 | Msa0996170 | 0.824503 | 7.793802e-54 | -8.615850e-47 |
| Msa0372340 | Msa0996170 | 0.810673 | 1.025334e-50 | -8.615850e-47 |
| Msa0379640 | Msa0996170 | 0.824668 | 7.126313e-54 | -8.615850e-47 |
| Msa0380040 | Msa0996170 | 0.807334 | 5.318968e-50 | -8.615850e-47 |
| Msa0389810 | Msa0996170 | 0.815122 | 1.086904e-51 | -8.615850e-47 |
| Msa0394340 | Msa0996170 | 0.820382 | 7.065944e-53 | -8.615850e-47 |
| Msa0398380 | Msa0996170 | 0.805324 | 1.410304e-49 | -8.615850e-47 |
| Msa0404030 | Msa0996170 | 0.814654 | 1.380096e-51 | -8.615850e-47 |
| Msa0406880 | Msa0996170 | 0.800186 | 1.621686e-48 | -8.615850e-47 |
| Msa0412840 | Msa0996170 | 0.808396 | 3.162273e-50 | -8.615850e-47 |
| Msa0420560 | Msa0996170 | 0.803158 | 3.983780e-49 | -8.615850e-47 |
| Msa0428080 | Msa0996170 | 0.804733 | 1.874678e-49 | -8.615850e-47 |
| Msa0429290 | Msa0996170 | 0.809450 | 1.880994e-50 | -8.615850e-47 |
| Msa0429950 | Msa0996170 | 0.804431 | 2.166947e-49 | -8.615850e-47 |
| Msa0431670 | Msa0996170 | 0.821402 | 4.115519e-53 | -8.615850e-47 |
| Msa0442200 | Msa0996170 | 0.843580 | 1.284222e-58 | -8.615850e-47 |
| Msa0442850 | Msa0996170 | 0.822881 | 1.868094e-53 | -8.615850e-47 |
| Msa0443920 | Msa0996170 | 0.829491 | 4.995808e-55 | -8.615850e-47 |
| Msa0445280 | Msa0996170 | 0.817746 | 2.810003e-52 | -8.615850e-47 |
| Msa0453330 | Msa0996170 | 0.802795 | 4.734282e-49 | -8.615850e-47 |
| Msa0458440 | Msa0996170 | 0.804297 | 2.311627e-49 | -8.615850e-47 |
| Msa0468130 | Msa0996170 | 0.819147 | 1.352566e-52 | -8.615850e-47 |
| Msa0475580 | Msa0996170 | 0.826057 | 3.343173e-54 | -8.615850e-47 |
| Msa0477260 | Msa0996170 | 0.805767 | 1.138566e-49 | -8.615850e-47 |
| Msa0480600 | Msa0996170 | 0.802475 | 5.512446e-49 | -8.615850e-47 |
| Msa0982270 | Msa0996170 | 0.820657 | 6.109375e-53 | -8.615850e-47 |
| Msa0993290 | Msa0996170 | 0.800172 | 1.632715e-48 | -8.615850e-47 |
| Msa0996170 | Msa1012660 | 0.809941 | 1.475176e-50 | -8.615850e-47 |
| Msa0996170 | Msa1012830 | 0.833098 | 6.482929e-56 | -8.615850e-47 |
| Msa0996170 | Msa1014540 | 0.811865 | 5.654432e-51 | -8.615850e-47 |
| Msa0996170 | Msa1021540 | 0.804469 | 2.127766e-49 | -8.615850e-47 |
| Msa0996170 | Msa1026760 | 0.801507 | 8.717455e-49 | -8.615850e-47 |
| Msa0996170 | Msa1037420 | 0.814642 | 1.388445e-51 | -8.615850e-47 |
| Msa0996170 | Msa1046020 | 0.808581 | 2.887421e-50 | -8.615850e-47 |
| Msa0996170 | Msa1046060 | 0.822697 | 2.061999e-53 | -8.615850e-47 |
| Msa0996170 | Msa1064250 | 0.801036 | 1.087989e-48 | -8.615850e-47 |
| Msa0996170 | Msa1075220 | -0.801172 | 1.020695e-48 | -8.615850e-47 |
| Msa0996170 | Msa1075650 | 0.809532 | 1.805936e-50 | -8.615850e-47 |
| Msa0996170 | Msa1082500 | 0.833955 | 3.961389e-56 | -8.615850e-47 |
| Msa0996170 | Msa1090260 | 0.840921 | 6.496984e-58 | -8.615850e-47 |
| Msa0996170 | Msa1107800 | 0.801261 | 9.789919e-49 | -8.615850e-47 |
| Msa0996170 | Msa1116130 | -0.811058 | 8.463547e-51 | -8.615850e-47 |
| Msa0996170 | Msa1129550 | 0.800012 | 1.759239e-48 | -8.615850e-47 |
| Msa0996170 | Msa1143930 | -0.816655 | 4.945485e-52 | -8.615850e-47 |
| Msa0996170 | Msa1156020 | 0.815406 | 9.395136e-52 | -8.615850e-47 |
| Msa0996170 | Msa1157150 | 0.804991 | 1.655508e-49 | -8.615850e-47 |
| Msa0996170 | Msa1162550 | -0.800472 | 1.418127e-48 | -8.615850e-47 |
| Msa0996170 | Msa1171870 | 0.808739 | 2.670723e-50 | -8.615850e-47 |
| Msa0996170 | Msa1172400 | 0.808421 | 3.123147e-50 | -8.615850e-47 |
| Msa0996170 | Msa1174040 | 0.834512 | 2.871417e-56 | -8.615850e-47 |
| Msa0996170 | Msa1181550 | 0.810034 | 1.408496e-50 | -8.615850e-47 |
| Msa0996170 | Msa1185980 | 0.807246 | 5.550846e-50 | -8.615850e-47 |
| Msa0996170 | Msa1186950 | -0.814816 | 1.270770e-51 | -8.615850e-47 |
| Msa0996170 | Msa1199220 | 0.810838 | 9.443770e-51 | -8.615850e-47 |
| Msa0996170 | Msa1203250 | 0.811822 | 5.775281e-51 | -8.615850e-47 |
| Msa0996170 | Msa1205130 | 0.807755 | 4.329122e-50 | -8.615850e-47 |
| Msa0996170 | Msa1207470 | -0.808781 | 2.616537e-50 | -8.615850e-47 |
| Msa0996170 | Msa1210110 | 0.811458 | 6.932508e-51 | -8.615850e-47 |
| Msa0996170 | Msa1215920 | 0.800234 | 1.585721e-48 | -8.615850e-47 |
| Msa0996170 | Msa1217430 | -0.813445 | 2.551141e-51 | -8.615850e-47 |
| Msa0996170 | Msa1224810 | 0.809157 | 2.173542e-50 | -8.615850e-47 |
| Msa0996170 | Msa1233500 | 0.823139 | 1.626482e-53 | -8.615850e-47 |
| Msa0996170 | Msa1233890 | 0.851467 | 8.706263e-61 | -8.615850e-47 |
| Msa0996170 | Msa1240180 | 0.802724 | 4.896729e-49 | -8.615850e-47 |
| Msa0996170 | Msa1244250 | 0.819236 | 1.291541e-52 | -8.615850e-47 |
| Msa0996170 | Msa1249490 | 0.844717 | 6.358527e-59 | -8.615850e-47 |
| Msa0996170 | Msa1250890 | 0.809606 | 1.741599e-50 | -8.615850e-47 |
| Msa0996170 | Msa1267260 | 0.806747 | 7.079410e-50 | -8.615850e-47 |
| Msa0996170 | Msa1271210 | 0.838970 | 2.095334e-57 | -8.615850e-47 |
| Msa0996170 | Msa1273920 | 0.803617 | 3.200141e-49 | -8.615850e-47 |
| Msa0996170 | Msa1275360 | 0.811616 | 6.404915e-51 | -8.615850e-47 |
| Msa0996170 | Msa1276440 | 0.813993 | 1.931521e-51 | -8.615850e-47 |
| Msa0996170 | Msa1277660 | 0.810961 | 8.882903e-51 | -8.615850e-47 |
| Msa0996170 | Msa1279210 | 0.800973 | 1.120920e-48 | -8.615850e-47 |
| Msa0996170 | Msa1300350 | -0.803947 | 2.732820e-49 | -8.615850e-47 |
| Msa0996170 | Msa1302190 | -0.816391 | 5.665576e-52 | -8.615850e-47 |
| Msa0996170 | Msa1302850 | 0.800792 | 1.220348e-48 | -8.615850e-47 |
| Msa0996170 | Msa1305190 | 0.800610 | 1.329684e-48 | -8.615850e-47 |
| Msa0996170 | Msa1305200 | 0.801158 | 1.027419e-48 | -8.615850e-47 |
| Msa0996170 | Msa1305350 | 0.808970 | 2.384153e-50 | -8.615850e-47 |
| Msa0996170 | Msa1306430 | 0.813215 | 2.865546e-51 | -8.615850e-47 |
| Msa0996170 | Msa1306750 | 0.835891 | 1.288596e-56 | -8.615850e-47 |
| Msa0996170 | Msa1306760 | 0.817086 | 3.956386e-52 | -8.615850e-47 |
| Msa0996170 | Msa1307740 | 0.809711 | 1.652953e-50 | -8.615850e-47 |
| Msa0996170 | Msa1314170 | 0.803699 | 3.077820e-49 | -8.615850e-47 |
| Msa0996170 | Msa1316820 | 0.808751 | 2.654938e-50 | -8.615850e-47 |
| Msa0996170 | Msa1320620 | 0.806201 | 9.230025e-50 | -8.615850e-47 |
| Msa0996170 | Msa1333410 | 0.817645 | 2.961730e-52 | -8.615850e-47 |
| Msa0996170 | Msa1348950 | 0.803340 | 3.653119e-49 | -8.615850e-47 |
| Msa0996170 | Msa1351620 | 0.801801 | 7.587155e-49 | -8.615850e-47 |
| Msa0996170 | Msa1362880 | 0.835154 | 1.978942e-56 | -8.615850e-47 |
| Msa0996170 | Msa1369530 | 0.809044 | 2.298604e-50 | -8.615850e-47 |
| Msa0996170 | Msa1376160 | -0.800310 | 1.530211e-48 | -8.615850e-47 |
| Msa0996170 | Msa1381960 | 0.801336 | 9.449057e-49 | -8.615850e-47 |
| Msa0996170 | Msa1403340 | 0.819308 | 1.243184e-52 | -8.615850e-47 |
| Msa0996170 | Msa1404670 | 0.802539 | 5.346549e-49 | -8.615850e-47 |
| Msa0996170 | Msa1405810 | 0.809689 | 1.671062e-50 | -8.615850e-47 |
| Msa0996170 | Msa1419960 | 0.823663 | 1.227130e-53 | -8.615850e-47 |
| Msa0996170 | Msa1424680 | 0.801836 | 7.460365e-49 | -8.615850e-47 |
| Msa0996170 | Msa1424750 | 0.811344 | 7.337839e-51 | -8.615850e-47 |
| Msa0996170 | Msa1427230 | 0.832017 | 1.201423e-55 | -8.615850e-47 |
| Msa0996170 | Msa1430680 | 0.829373 | 5.339092e-55 | -8.615850e-47 |
| Msa0996170 | Msa1438700 | 0.800217 | 1.598766e-48 | -8.615850e-47 |
| Msa0996170 | Msa1440000 | 0.802195 | 6.295836e-49 | -8.615850e-47 |
| Msa0996170 | Msa1444740 | 0.812271 | 4.610907e-51 | -8.615850e-47 |
| Msa0996170 | Msa1451620 | -0.814036 | 1.889766e-51 | -8.615850e-47 |
| Msa0996170 | Msa1455390 | 0.802648 | 5.076872e-49 | -8.615850e-47 |
| Msa0996170 | Msa1455490 | 0.818591 | 1.809720e-52 | -8.615850e-47 |
| Msa0996170 | Msa1457160 | 0.803169 | 3.963981e-49 | -8.615850e-47 |
| Msa0996170 | Msa1460830 | 0.820372 | 7.100873e-53 | -8.615850e-47 |
| Msa0996170 | Msa1465960 | 0.802226 | 6.204414e-49 | -8.615850e-47 |
| Msa0239800 | Msa0996170 | 0.844840 | 5.892458e-59 | -8.615850e-47 |
| Msa0241640 | Msa0996170 | 0.802321 | 5.929646e-49 | -8.615850e-47 |
| Msa0243480 | Msa0996170 | 0.800357 | 1.496942e-48 | -8.615850e-47 |
| Msa0244190 | Msa0996170 | 0.801938 | 7.108566e-49 | -8.615850e-47 |
| Msa0245880 | Msa0996170 | 0.800766 | 1.235711e-48 | -8.615850e-47 |
| Msa0255080 | Msa0996170 | 0.807826 | 4.180635e-50 | -8.615850e-47 |
| Msa0256330 | Msa0996170 | 0.818983 | 1.474297e-52 | -8.615850e-47 |
| Msa0259370 | Msa0996170 | 0.802442 | 5.599513e-49 | -8.615850e-47 |
| Msa0260210 | Msa0996170 | 0.803306 | 3.712353e-49 | -8.615850e-47 |
| Msa0260680 | Msa0996170 | 0.807516 | 4.865397e-50 | -8.615850e-47 |
| Msa0265380 | Msa0996170 | 0.816259 | 6.063537e-52 | -8.615850e-47 |
| Msa0268090 | Msa0996170 | 0.800977 | 1.118917e-48 | -8.615850e-47 |
| Msa0269810 | Msa0996170 | 0.805497 | 1.297569e-49 | -8.615850e-47 |
| Msa0277820 | Msa0996170 | 0.825035 | 5.836343e-54 | -8.615850e-47 |
| Msa0278110 | Msa0996170 | 0.804882 | 1.745161e-49 | -8.615850e-47 |
| Msa0279790 | Msa0996170 | 0.816284 | 5.987595e-52 | -8.615850e-47 |
| Msa0280090 | Msa0996170 | 0.809156 | 2.174810e-50 | -8.615850e-47 |
| Msa0295330 | Msa0996170 | 0.819936 | 8.940685e-53 | -8.615850e-47 |
| Msa0298700 | Msa0996170 | 0.813062 | 3.095678e-51 | -8.615850e-47 |
| Msa0303360 | Msa0996170 | 0.804447 | 2.151189e-49 | -8.615850e-47 |
| Msa0303380 | Msa0996170 | 0.829486 | 5.010245e-55 | -8.615850e-47 |
| Msa0305890 | Msa0996170 | 0.800355 | 1.498722e-48 | -8.615850e-47 |
| Msa0317510 | Msa0996170 | 0.837807 | 4.179529e-57 | -8.615850e-47 |
| Msa0321080 | Msa0996170 | 0.818559 | 1.839830e-52 | -8.615850e-47 |
| Msa0323080 | Msa0996170 | 0.801941 | 7.100260e-49 | -8.615850e-47 |
| Msa0339620 | Msa0996170 | 0.807156 | 5.799831e-50 | -8.615850e-47 |
| Msa0340450 | Msa0996170 | 0.813287 | 2.762111e-51 | -8.615850e-47 |
| Msa0340710 | Msa0996170 | 0.801695 | 7.973875e-49 | -8.615850e-47 |
| Msa0344830 | Msa0996170 | 0.813040 | 3.129330e-51 | -8.615850e-47 |
| Msa0344870 | Msa0996170 | 0.816524 | 5.289986e-52 | -8.615850e-47 |
| Msa0347610 | Msa0996170 | 0.801526 | 8.639595e-49 | -8.615850e-47 |
| Msa0350990 | Msa0996170 | 0.814022 | 1.903198e-51 | -8.615850e-47 |
| Msa0351030 | Msa0996170 | 0.819888 | 9.169019e-53 | -8.615850e-47 |
| Msa0351080 | Msa0996170 | 0.831956 | 1.243878e-55 | -8.615850e-47 |
| Msa0351100 | Msa0996170 | 0.800954 | 1.131175e-48 | -8.615850e-47 |
| Msa0357830 | Msa0996170 | 0.802878 | 4.551243e-49 | -8.615850e-47 |
| Msa0363790 | Msa0996170 | 0.803154 | 3.991423e-49 | -8.615850e-47 |
| Msa0484780 | Msa0996170 | 0.810271 | 1.252606e-50 | -8.615850e-47 |
| Msa0485490 | Msa0996170 | 0.801728 | 7.850658e-49 | -8.615850e-47 |
| Msa0488270 | Msa0996170 | 0.811590 | 6.486766e-51 | -8.615850e-47 |
| Msa0489610 | Msa0996170 | 0.818377 | 2.023666e-52 | -8.615850e-47 |
| Msa0500720 | Msa0996170 | 0.811953 | 5.409429e-51 | -8.615850e-47 |
| Msa0509390 | Msa0996170 | 0.808494 | 3.013474e-50 | -8.615850e-47 |
| Msa0517110 | Msa0996170 | 0.802103 | 6.576193e-49 | -8.615850e-47 |
| Msa0518380 | Msa0996170 | 0.811506 | 6.768332e-51 | -8.615850e-47 |
| Msa0519220 | Msa0996170 | 0.800024 | 1.749874e-48 | -8.615850e-47 |
| Msa0541040 | Msa0996170 | 0.800964 | 1.125608e-48 | -8.615850e-47 |
| Msa0545080 | Msa0996170 | 0.809596 | 1.750160e-50 | -8.615850e-47 |
| Msa0553220 | Msa0996170 | -0.811898 | 5.559317e-51 | -8.615850e-47 |
| Msa0553460 | Msa0996170 | 0.806923 | 6.496861e-50 | -8.615850e-47 |
| Msa0558690 | Msa0996170 | 0.825351 | 4.916226e-54 | -8.615850e-47 |
| Msa0562440 | Msa0996170 | 0.831092 | 2.030926e-55 | -8.615850e-47 |
| Msa0580530 | Msa0996170 | 0.808989 | 2.361921e-50 | -8.615850e-47 |
| Msa0587030 | Msa0996170 | 0.817807 | 2.723288e-52 | -8.615850e-47 |
| Msa0593650 | Msa0996170 | 0.809808 | 1.575480e-50 | -8.615850e-47 |
| Msa0596800 | Msa0996170 | 0.810691 | 1.016496e-50 | -8.615850e-47 |
| Msa0842650 | Msa0996170 | 0.804850 | 1.772064e-49 | -8.615850e-47 |
| Msa0849030 | Msa0996170 | 0.825593 | 4.307341e-54 | -8.615850e-47 |
| Msa0857640 | Msa0996170 | 0.801167 | 1.022930e-48 | -8.615850e-47 |
| Msa0860410 | Msa0996170 | 0.810662 | 1.031298e-50 | -8.615850e-47 |
| Msa0861130 | Msa0996170 | 0.824326 | 8.575948e-54 | -8.615850e-47 |
| Msa0870060 | Msa0996170 | 0.834802 | 2.428088e-56 | -8.615850e-47 |
| Msa0870150 | Msa0996170 | 0.807065 | 6.063669e-50 | -8.615850e-47 |
| Msa0876580 | Msa0996170 | 0.828757 | 7.526746e-55 | -8.615850e-47 |
| Msa0935770 | Msa0996170 | 0.817556 | 3.102348e-52 | -8.615850e-47 |
| Msa0935850 | Msa0996170 | 0.805316 | 1.415799e-49 | -8.615850e-47 |
| Msa0947760 | Msa0996170 | 0.833569 | 4.946843e-56 | -8.615850e-47 |
| Msa0964130 | Msa0996170 | 0.803935 | 2.748775e-49 | -8.615850e-47 |
| Msa0969520 | Msa0996170 | 0.802585 | 5.232570e-49 | -8.615850e-47 |
| Msa0969810 | Msa0996170 | 0.803780 | 2.961032e-49 | -8.615850e-47 |
| Msa0970420 | Msa0996170 | 0.809568 | 1.774746e-50 | -8.615850e-47 |
| Msa0971020 | Msa0996170 | 0.822618 | 2.150905e-53 | -8.615850e-47 |
| Msa0973600 | Msa0996170 | 0.806278 | 8.891086e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0996170 | MtrunA17_Chr6g0480851 | 89.388 | 245 | 12 | 1 | 1 | 231 | 518 | 762 | 1.60e-153 | 444 |
| Msa0996170 | MtrunA17_Chr6g0480781 | 76.860 | 242 | 42 | 1 | 1 | 228 | 503 | 744 | 5.36e-127 | 377 |
| Msa0996170 | MtrunA17_Chr5g0395421 | 80.455 | 220 | 26 | 2 | 1 | 203 | 149 | 368 | 2.31e-122 | 352 |
| Msa0996170 | MtrunA17_Chr6g0480741 | 70.085 | 234 | 56 | 1 | 4 | 223 | 449 | 682 | 1.46e-108 | 327 |
| Msa0996170 | MtrunA17_Chr6g0480771 | 66.255 | 243 | 65 | 2 | 1 | 229 | 29 | 268 | 6.41e-108 | 312 |
| Msa0996170 | MtrunA17_Chr6g0480671 | 70.661 | 242 | 55 | 2 | 1 | 228 | 529 | 768 | 6.11e-107 | 325 |
| Msa0996170 | MtrunA17_Chr6g0480841 | 74.272 | 206 | 39 | 1 | 38 | 229 | 2 | 207 | 4.97e-104 | 300 |
| Msa0996170 | MtrunA17_Chr6g0481021 | 67.797 | 236 | 60 | 2 | 1 | 222 | 464 | 697 | 9.79e-104 | 315 |
| Msa0996170 | MtrunA17_Chr6g0480681 | 67.083 | 240 | 62 | 2 | 4 | 229 | 477 | 713 | 2.53e-103 | 315 |
| Msa0996170 | MtrunA17_Chr2g0305771 | 44.053 | 227 | 113 | 5 | 2 | 217 | 386 | 609 | 2.27e-49 | 171 |
| Msa0996170 | MtrunA17_Chr3g0125651 | 43.750 | 224 | 112 | 5 | 3 | 215 | 379 | 599 | 4.05e-49 | 170 |
| Msa0996170 | MtrunA17_Chr3g0139071 | 41.667 | 240 | 126 | 5 | 2 | 230 | 416 | 652 | 8.04e-49 | 170 |
| Msa0996170 | MtrunA17_Chr4g0073941 | 42.609 | 230 | 117 | 6 | 1 | 218 | 437 | 663 | 2.61e-46 | 163 |
| Msa0996170 | MtrunA17_Chr4g0001481 | 42.081 | 221 | 114 | 5 | 1 | 210 | 442 | 659 | 1.31e-45 | 161 |
| Msa0996170 | MtrunA17_Chr7g0228181 | 41.964 | 224 | 116 | 5 | 3 | 215 | 387 | 607 | 7.69e-45 | 159 |
| Msa0996170 | MtrunA17_Chr7g0275581 | 39.394 | 231 | 126 | 5 | 1 | 219 | 420 | 648 | 1.78e-44 | 158 |
| Msa0996170 | MtrunA17_Chr3g0126541 | 41.667 | 228 | 118 | 6 | 1 | 216 | 415 | 639 | 3.44e-44 | 157 |
| Msa0996170 | MtrunA17_Chr1g0158861 | 39.394 | 231 | 125 | 6 | 1 | 219 | 417 | 644 | 3.98e-43 | 154 |
| Msa0996170 | MtrunA17_Chr1g0181121 | 40.000 | 240 | 129 | 6 | 2 | 230 | 379 | 614 | 6.91e-43 | 153 |
| Msa0996170 | MtrunA17_Chr4g0028861 | 41.395 | 215 | 112 | 5 | 7 | 210 | 464 | 675 | 3.32e-41 | 149 |
| Msa0996170 | MtrunA17_Chr2g0326871 | 41.364 | 220 | 115 | 6 | 7 | 215 | 417 | 633 | 1.43e-40 | 147 |
| Msa0996170 | MtrunA17_Chr2g0318561 | 38.428 | 229 | 130 | 5 | 1 | 220 | 229 | 455 | 9.97e-40 | 142 |
| Msa0996170 | MtrunA17_Chr8g0347121 | 35.271 | 258 | 122 | 6 | 1 | 215 | 399 | 654 | 1.79e-37 | 138 |
| Msa0996170 | MtrunA17_Chr8g0360821 | 39.381 | 226 | 126 | 5 | 1 | 217 | 406 | 629 | 2.00e-37 | 138 |
| Msa0996170 | MtrunA17_Chr7g0218341 | 36.607 | 224 | 131 | 5 | 1 | 215 | 454 | 675 | 6.39e-33 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0996170 | AT3G17690.1 | 62.025 | 237 | 76 | 2 | 1 | 225 | 492 | 726 | 1.48e-97 | 300 |
| Msa0996170 | AT3G17700.1 | 61.826 | 241 | 76 | 2 | 1 | 227 | 525 | 763 | 1.30e-90 | 282 |
| Msa0996170 | AT3G17700.2 | 68.750 | 144 | 43 | 1 | 1 | 144 | 525 | 666 | 2.84e-61 | 203 |
| Msa0996170 | AT3G17690.2 | 65.972 | 144 | 47 | 1 | 1 | 144 | 492 | 633 | 9.22e-60 | 199 |
| Msa0996170 | AT4G30360.1 | 44.828 | 232 | 114 | 5 | 2 | 222 | 413 | 641 | 8.90e-53 | 181 |
| Msa0996170 | AT2G24610.1 | 41.841 | 239 | 124 | 6 | 2 | 228 | 413 | 648 | 6.58e-49 | 171 |
| Msa0996170 | AT2G24610.2 | 41.841 | 239 | 124 | 6 | 2 | 228 | 428 | 663 | 7.06e-49 | 171 |
| Msa0996170 | AT1G19780.2 | 42.920 | 226 | 115 | 5 | 1 | 215 | 228 | 450 | 1.14e-48 | 167 |
| Msa0996170 | AT1G19780.1 | 42.920 | 226 | 115 | 5 | 1 | 215 | 439 | 661 | 1.03e-47 | 167 |
| Msa0996170 | AT1G01340.1 | 41.558 | 231 | 120 | 6 | 1 | 219 | 399 | 626 | 2.07e-47 | 166 |
| Msa0996170 | AT1G01340.2 | 41.558 | 231 | 120 | 6 | 1 | 219 | 404 | 631 | 2.31e-47 | 166 |
| Msa0996170 | AT4G30560.1 | 44.493 | 227 | 111 | 6 | 1 | 215 | 444 | 667 | 4.08e-47 | 166 |
| Msa0996170 | AT4G30560.4 | 44.493 | 227 | 111 | 6 | 1 | 215 | 444 | 667 | 4.08e-47 | 166 |
| Msa0996170 | AT4G30560.5 | 44.493 | 227 | 111 | 6 | 1 | 215 | 418 | 641 | 4.10e-47 | 166 |
| Msa0996170 | AT4G30560.2 | 44.493 | 227 | 111 | 6 | 1 | 215 | 418 | 641 | 4.10e-47 | 166 |
| Msa0996170 | AT4G30560.3 | 44.493 | 227 | 111 | 6 | 1 | 215 | 418 | 641 | 4.10e-47 | 166 |
| Msa0996170 | AT1G15990.1 | 42.478 | 226 | 116 | 5 | 1 | 215 | 433 | 655 | 5.81e-47 | 165 |
| Msa0996170 | AT3G48010.1 | 43.421 | 228 | 114 | 6 | 2 | 217 | 389 | 613 | 2.35e-46 | 163 |
| Msa0996170 | AT5G57940.3 | 42.478 | 226 | 116 | 5 | 1 | 215 | 422 | 644 | 4.45e-46 | 162 |
| Msa0996170 | AT2G23980.6 | 43.363 | 226 | 114 | 5 | 1 | 215 | 418 | 640 | 4.49e-46 | 162 |
| Msa0996170 | AT2G23980.9 | 43.363 | 226 | 114 | 5 | 1 | 215 | 445 | 667 | 4.75e-46 | 163 |
| Msa0996170 | AT2G23980.10 | 43.363 | 226 | 114 | 5 | 1 | 215 | 445 | 667 | 4.75e-46 | 163 |
| Msa0996170 | AT2G23980.1 | 43.363 | 226 | 114 | 5 | 1 | 215 | 445 | 667 | 4.75e-46 | 163 |
| Msa0996170 | AT2G23980.4 | 43.363 | 226 | 114 | 5 | 1 | 215 | 445 | 667 | 4.75e-46 | 163 |
| Msa0996170 | AT2G23980.5 | 43.363 | 226 | 114 | 5 | 1 | 215 | 445 | 667 | 4.75e-46 | 163 |
| Msa0996170 | AT4G01010.1 | 40.084 | 237 | 127 | 6 | 1 | 225 | 405 | 638 | 5.01e-46 | 162 |
| Msa0996170 | AT4G01010.2 | 40.084 | 237 | 127 | 6 | 1 | 225 | 405 | 638 | 5.01e-46 | 162 |
| Msa0996170 | AT5G57940.1 | 42.478 | 226 | 116 | 5 | 1 | 215 | 429 | 651 | 5.37e-46 | 162 |
| Msa0996170 | AT5G57940.2 | 42.478 | 226 | 116 | 5 | 1 | 215 | 429 | 651 | 5.37e-46 | 162 |
| Msa0996170 | AT2G23980.3 | 43.363 | 226 | 114 | 5 | 1 | 215 | 468 | 690 | 6.22e-46 | 162 |
| Msa0996170 | AT2G23980.2 | 43.363 | 226 | 114 | 5 | 1 | 215 | 468 | 690 | 6.22e-46 | 162 |
| Msa0996170 | AT2G23980.8 | 43.363 | 226 | 114 | 5 | 1 | 215 | 468 | 690 | 6.22e-46 | 162 |
| Msa0996170 | AT2G23980.7 | 43.363 | 226 | 114 | 5 | 1 | 215 | 468 | 690 | 6.22e-46 | 162 |
| Msa0996170 | AT5G53130.1 | 41.629 | 221 | 115 | 5 | 1 | 210 | 417 | 634 | 2.51e-44 | 158 |
| Msa0996170 | AT5G14870.1 | 39.076 | 238 | 130 | 6 | 6 | 231 | 385 | 619 | 1.15e-43 | 156 |
| Msa0996170 | AT2G28260.2 | 40.444 | 225 | 120 | 5 | 2 | 215 | 363 | 584 | 1.43e-42 | 152 |
| Msa0996170 | AT2G28260.1 | 40.444 | 225 | 120 | 5 | 2 | 215 | 403 | 624 | 1.75e-42 | 152 |
| Msa0996170 | AT2G46430.1 | 40.000 | 245 | 123 | 9 | 1 | 225 | 408 | 648 | 2.43e-41 | 149 |
| Msa0996170 | AT2G46430.2 | 40.000 | 245 | 123 | 9 | 1 | 225 | 408 | 648 | 2.43e-41 | 149 |
| Msa0996170 | AT5G54250.2 | 38.496 | 226 | 128 | 5 | 1 | 217 | 427 | 650 | 2.90e-37 | 138 |
| Msa0996170 | AT5G54250.1 | 38.496 | 226 | 128 | 5 | 1 | 217 | 427 | 650 | 2.90e-37 | 138 |
| Msa0996170 | AT5G54250.4 | 38.496 | 226 | 128 | 5 | 1 | 217 | 427 | 650 | 2.90e-37 | 138 |
| Msa0996170 | AT5G54250.3 | 38.222 | 225 | 125 | 6 | 1 | 217 | 427 | 645 | 1.81e-34 | 130 |
| Msa0996170 | AT5G15410.1 | 38.073 | 218 | 124 | 4 | 1 | 209 | 462 | 677 | 7.08e-34 | 128 |
| Msa0996170 | AT5G15410.2 | 38.073 | 218 | 124 | 4 | 1 | 209 | 461 | 676 | 7.71e-34 | 128 |
| Msa0996170 | AT2G46440.2 | 37.295 | 244 | 131 | 8 | 1 | 225 | 188 | 428 | 1.75e-32 | 122 |
| Msa0996170 | AT2G46440.1 | 37.295 | 244 | 131 | 8 | 1 | 225 | 366 | 606 | 9.60e-32 | 122 |
| Msa0996170 | AT2G46450.3 | 33.333 | 231 | 143 | 4 | 1 | 224 | 330 | 556 | 1.73e-30 | 118 |
| Msa0996170 | AT2G46450.2 | 33.333 | 231 | 143 | 4 | 1 | 224 | 343 | 569 | 1.78e-30 | 119 |
| Msa0996170 | AT2G46450.4 | 33.333 | 231 | 143 | 4 | 1 | 224 | 366 | 592 | 2.16e-30 | 118 |
| Msa0996170 | AT2G46450.1 | 33.333 | 231 | 143 | 4 | 1 | 224 | 366 | 592 | 2.16e-30 | 118 |
Find 68 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGAATAGTGGTATGCTTAT+AGG | 0.263460 | 6_4:+73863292 | Msa0996170:three_prime_UTR |
| GTTTATTGTGCGTGGAAAAT+TGG | 0.274539 | 6_4:+73862210 | Msa0996170:CDS |
| GCTTACCAGAAGAACTTAAA+AGG | 0.284129 | 6_4:+73861506 | Msa0996170:CDS |
| CACTTGCAGTAAACAGAATT+CGG | 0.289321 | 6_4:+73863148 | Msa0996170:CDS |
| ATGTCTGTCTGGAGATCTTC+TGG | 0.319596 | 6_4:-73861720 | None:intergenic |
| AAGGGGTGTTCCTGAGAAAA+TGG | 0.334550 | 6_4:+73861683 | Msa0996170:CDS |
| ATACAGACGACATACATTAA+AGG | 0.335319 | 6_4:+73862145 | Msa0996170:CDS |
| AGAATAGTGGTATGCTTATA+GGG | 0.352341 | 6_4:+73863293 | Msa0996170:three_prime_UTR |
| TTAGGTATGAATCACCTTAC+TGG | 0.364609 | 6_4:+73863121 | Msa0996170:intron |
| TCACGAATGGCGTCTAAGAT+AGG | 0.365376 | 6_4:-73862115 | None:intergenic |
| ATCCATGATCATTTGATTCA+AGG | 0.386079 | 6_4:+73863422 | Msa0996170:three_prime_UTR |
| AGGAAGTAAATTTCTCAGTC+AGG | 0.403042 | 6_4:+73862165 | Msa0996170:CDS |
| TGTTCCTGAGAAAATGGTTC+TGG | 0.409988 | 6_4:+73861689 | Msa0996170:CDS |
| GTTCTTCTGGTAAGCAATGA+TGG | 0.420523 | 6_4:-73861498 | None:intergenic |
| CGTCGGAGAGGATGGAATTC+CGG | 0.422155 | 6_4:+73862237 | Msa0996170:CDS |
| TTCGGGTTGCATGGAGATAC+AGG | 0.422208 | 6_4:+73863166 | Msa0996170:CDS |
| ATTCACTACATTGAAGTCCT+TGG | 0.422957 | 6_4:+73863267 | Msa0996170:three_prime_UTR |
| TTCCTTGAATCAAATGATCA+TGG | 0.424136 | 6_4:-73863424 | None:intergenic |
| CATGGATATATTTATCATGA+TGG | 0.427511 | 6_4:-73863406 | None:intergenic |
| TTGCGGAGCCCTCGTGTTCA+AGG | 0.432055 | 6_4:+73862566 | Msa0996170:CDS |
| TAGGGTCATCCTCAGCCATA+TGG | 0.436659 | 6_4:-73862096 | None:intergenic |
| GGCAGGCTGAACGGTATAGT+TGG | 0.446424 | 6_4:+73861652 | Msa0996170:CDS |
| TCCCCTTCTGATAACGGAAC+CGG | 0.459445 | 6_4:-73862256 | None:intergenic |
| GCAGGCTGAACGGTATAGTT+GGG | 0.472885 | 6_4:+73861653 | Msa0996170:CDS |
| TTGGAGAGCGTCGGAGAGGA+TGG | 0.482934 | 6_4:+73862229 | Msa0996170:CDS |
| GTCATGCAGGAGAGTGCGGC+AGG | 0.485642 | 6_4:+73861635 | Msa0996170:intron |
| TATTAACAAATTTGAAGAGA+TGG | 0.501093 | 6_4:-73861749 | None:intergenic |
| GTATAGTTGGGCTGCAACAA+GGG | 0.505727 | 6_4:+73861665 | Msa0996170:CDS |
| CAAGCATCCCCTTCTGATAA+CGG | 0.505912 | 6_4:-73862262 | None:intergenic |
| GATGGCGTCTTATGTCTGTC+TGG | 0.521052 | 6_4:-73861731 | None:intergenic |
| ACTTGCAGTAAACAGAATTC+GGG | 0.523626 | 6_4:+73863149 | Msa0996170:CDS |
| TAAACAGAATTCGGGTTGCA+TGG | 0.527023 | 6_4:+73863157 | Msa0996170:CDS |
| GGTATAGTTGGGCTGCAACA+AGG | 0.533253 | 6_4:+73861664 | Msa0996170:CDS |
| CACGAATGGCGTCTAAGATA+GGG | 0.533961 | 6_4:-73862114 | None:intergenic |
| CTCGTGTTCAAGGAGTTATA+AGG | 0.533997 | 6_4:+73862576 | Msa0996170:CDS |
| AAACATTAGAGAAGAGCCTA+TGG | 0.534416 | 6_4:-73863243 | None:intergenic |
| AGGATAGAAATGCAACTTAG+AGG | 0.538796 | 6_4:+73861451 | Msa0996170:exon |
| GGGTGGTCTTGTACAGAAGA+TGG | 0.547676 | 6_4:+73862186 | Msa0996170:CDS |
| GGAAGTAAATTTCTCAGTCA+GGG | 0.548088 | 6_4:+73862166 | Msa0996170:CDS |
| CATACCACTATTCTATTCCA+AGG | 0.557542 | 6_4:-73863284 | None:intergenic |
| AGGGTCATCCTCAGCCATAT+GGG | 0.559056 | 6_4:-73862095 | None:intergenic |
| TCCGGTTCCGTTATCAGAAG+GGG | 0.560727 | 6_4:+73862255 | Msa0996170:CDS |
| GGAGAGTGCGGCAGGCTGAA+CGG | 0.561282 | 6_4:+73861643 | Msa0996170:intron |
| AAGTCCTTGGAATAGAATAG+TGG | 0.561529 | 6_4:+73863280 | Msa0996170:three_prime_UTR |
| ACTGCAAGTGATCTCCAGTA+AGG | 0.565458 | 6_4:-73863135 | None:intergenic |
| ATTCCGGTTCCGTTATCAGA+AGG | 0.567052 | 6_4:+73862253 | Msa0996170:CDS |
| TTATCAAACATTGATGCCAT+AGG | 0.570396 | 6_4:+73863227 | Msa0996170:CDS |
| TAGGGAGTTATAAAGTAGCT+AGG | 0.577311 | 6_4:+73863347 | Msa0996170:three_prime_UTR |
| CTGTATTAGTCTCTCACGAA+TGG | 0.579807 | 6_4:-73862128 | None:intergenic |
| ATCTGTCATGCAGGAGAGTG+CGG | 0.584547 | 6_4:+73861631 | Msa0996170:intron |
| GTGGTGAAGAACTTCTAAGA+TGG | 0.591370 | 6_4:+73862284 | Msa0996170:CDS |
| TTCCGGTTCCGTTATCAGAA+GGG | 0.604864 | 6_4:+73862254 | Msa0996170:CDS |
| TTCTGTCGCTAGTCAAACCC+TGG | 0.605869 | 6_4:-73862460 | None:intergenic |
| AAGATGGTGTTTATTGTGCG+TGG | 0.607353 | 6_4:+73862202 | Msa0996170:CDS |
| TATAGTTGGGCTGCAACAAG+GGG | 0.617263 | 6_4:+73861666 | Msa0996170:CDS |
| CTTATAACTCCTTGAACACG+AGG | 0.618090 | 6_4:-73862575 | None:intergenic |
| CGTGGAAAATTGGAGAGCGT+CGG | 0.618147 | 6_4:+73862220 | Msa0996170:CDS |
| AACTTGAGAAGATTTGTAGG+AGG | 0.624626 | 6_4:+73861431 | Msa0996170:five_prime_UTR |
| TTATCAGAAGGGGATGCTTG+TGG | 0.631551 | 6_4:+73862265 | Msa0996170:CDS |
| CTTCTTCAATGTCTTTAGCG+CGG | 0.635302 | 6_4:-73862520 | None:intergenic |
| AGTAAGATGCTTAACCAATG+TGG | 0.646548 | 6_4:+73862484 | Msa0996170:CDS |
| GAGTGAAAATGCCTCCACAT+TGG | 0.655949 | 6_4:-73862498 | None:intergenic |
| AAGATGCTTAACCAATGTGG+AGG | 0.669911 | 6_4:+73862487 | Msa0996170:CDS |
| GAGGTCGTGATGTTGAGCAA+TGG | 0.676062 | 6_4:+73861470 | Msa0996170:CDS |
| AAAATTGGAGAGCGTCGGAG+AGG | 0.681877 | 6_4:+73862225 | Msa0996170:CDS |
| AGTAAATTTCTCAGTCAGGG+TGG | 0.692049 | 6_4:+73862169 | Msa0996170:CDS |
| TGTTTGATAATCATTATGTG+TGG | 0.718297 | 6_4:-73863214 | None:intergenic |
| TTATAACTCCTTGAACACGA+GGG | 0.753036 | 6_4:-73862574 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATAATGGATTACTTATTA+TGG | + | chr6_4:73861587-73861606 | Msa0996170:intron | 15.0% |
| !!! | TTTTTATAGAATAAGCTTAT+AGG | + | chr6_4:73863328-73863347 | Msa0996170:three_prime_UTR | 15.0% |
| !!! | TTTTATAGAATAAGCTTATA+GGG | + | chr6_4:73863329-73863348 | Msa0996170:three_prime_UTR | 15.0% |
| !!! | AAATAATGGATTACTTATTA+TGG | + | chr6_4:73861587-73861606 | Msa0996170:intron | 15.0% |
| !!! | TTTTTATAGAATAAGCTTAT+AGG | + | chr6_4:73863328-73863347 | Msa0996170:three_prime_UTR | 15.0% |
| !!! | TTTTATAGAATAAGCTTATA+GGG | + | chr6_4:73863329-73863348 | Msa0996170:three_prime_UTR | 15.0% |
| !!! | ATTATTTGATAGATGTGTTT+TGG | - | chr6_4:73861574-73861593 | None:intergenic | 20.0% |
| !! | AAAACACATCTATCAAATAA+TGG | + | chr6_4:73861573-73861592 | Msa0996170:intron | 20.0% |
| !! | TATTAACAAATTTGAAGAGA+TGG | - | chr6_4:73861752-73861771 | None:intergenic | 20.0% |
| !!! | TTAAGTCGATTTTATTTATC+TGG | + | chr6_4:73861807-73861826 | Msa0996170:intron | 20.0% |
| !! | AATGCAATTGAATCATAAAA+GGG | - | chr6_4:73862667-73862686 | None:intergenic | 20.0% |
| !! | AAATGCAATTGAATCATAAA+AGG | - | chr6_4:73862668-73862687 | None:intergenic | 20.0% |
| !! | TTTATGATTCAATTGCATTT+CGG | + | chr6_4:73862668-73862687 | Msa0996170:intron | 20.0% |
| !!! | TGGTTTTGATAATAGATATT+AGG | - | chr6_4:73863061-73863080 | None:intergenic | 20.0% |
| !!! | ATTATTTGATAGATGTGTTT+TGG | - | chr6_4:73861574-73861593 | None:intergenic | 20.0% |
| !! | AAAACACATCTATCAAATAA+TGG | + | chr6_4:73861573-73861592 | Msa0996170:intron | 20.0% |
| !! | TATTAACAAATTTGAAGAGA+TGG | - | chr6_4:73861752-73861771 | None:intergenic | 20.0% |
| !!! | TTAAGTCGATTTTATTTATC+TGG | + | chr6_4:73861807-73861826 | Msa0996170:intron | 20.0% |
| !! | AATGCAATTGAATCATAAAA+GGG | - | chr6_4:73862667-73862686 | None:intergenic | 20.0% |
| !! | AAATGCAATTGAATCATAAA+AGG | - | chr6_4:73862668-73862687 | None:intergenic | 20.0% |
| !! | TTTATGATTCAATTGCATTT+CGG | + | chr6_4:73862668-73862687 | Msa0996170:intron | 20.0% |
| !!! | TGGTTTTGATAATAGATATT+AGG | - | chr6_4:73863061-73863080 | None:intergenic | 20.0% |
| ! | AAAAACTTGAGAAGATTTGT+AGG | + | chr6_4:73861428-73861447 | Msa0996170:five_prime_UTR | 25.0% |
| ! | ACTTATTATGGTACAAATGA+TGG | + | chr6_4:73861599-73861618 | Msa0996170:intron | 25.0% |
| !! | TTTTCTCATTCAACTTCTAT+TGG | - | chr6_4:73861923-73861942 | None:intergenic | 25.0% |
| ! | TAAAACAATGACGCATTAAA+AGG | + | chr6_4:73861984-73862003 | Msa0996170:intron | 25.0% |
| ! | AGAATGTGTTTATAAGTGAT+GGG | - | chr6_4:73862754-73862773 | None:intergenic | 25.0% |
| ! | TATGACAATATGTATTCAAG+TGG | - | chr6_4:73862964-73862983 | None:intergenic | 25.0% |
| ! | ATATCTTATCTCATCCAATA+TGG | + | chr6_4:73862981-73863000 | Msa0996170:intron | 25.0% |
| ! | AATTGTTATGAGTTCCATAT+TGG | - | chr6_4:73862998-73863017 | None:intergenic | 25.0% |
| ! | TCTCTGACGTAATAATTATT+TGG | + | chr6_4:73863083-73863102 | Msa0996170:intron | 25.0% |
| !! | TGTTTGATAATCATTATGTG+TGG | - | chr6_4:73863217-73863236 | None:intergenic | 25.0% |
| ! | CATGGATATATTTATCATGA+TGG | - | chr6_4:73863409-73863428 | None:intergenic | 25.0% |
| ! | AAAAACTTGAGAAGATTTGT+AGG | + | chr6_4:73861428-73861447 | Msa0996170:five_prime_UTR | 25.0% |
| ! | ACTTATTATGGTACAAATGA+TGG | + | chr6_4:73861599-73861618 | Msa0996170:intron | 25.0% |
| !! | TTTTCTCATTCAACTTCTAT+TGG | - | chr6_4:73861923-73861942 | None:intergenic | 25.0% |
| ! | TAAAACAATGACGCATTAAA+AGG | + | chr6_4:73861984-73862003 | Msa0996170:intron | 25.0% |
| ! | AGAATGTGTTTATAAGTGAT+GGG | - | chr6_4:73862754-73862773 | None:intergenic | 25.0% |
| ! | TATGACAATATGTATTCAAG+TGG | - | chr6_4:73862964-73862983 | None:intergenic | 25.0% |
| ! | ATATCTTATCTCATCCAATA+TGG | + | chr6_4:73862981-73863000 | Msa0996170:intron | 25.0% |
| ! | AATTGTTATGAGTTCCATAT+TGG | - | chr6_4:73862998-73863017 | None:intergenic | 25.0% |
| ! | TCTCTGACGTAATAATTATT+TGG | + | chr6_4:73863083-73863102 | Msa0996170:intron | 25.0% |
| !! | TGTTTGATAATCATTATGTG+TGG | - | chr6_4:73863217-73863236 | None:intergenic | 25.0% |
| ! | CATGGATATATTTATCATGA+TGG | - | chr6_4:73863409-73863428 | None:intergenic | 25.0% |
| !!! | TCATACCTTTTAAGTTCTTC+TGG | - | chr6_4:73861514-73861533 | None:intergenic | 30.0% |
| ATACTATATATCTGTCATGC+AGG | + | chr6_4:73861622-73861641 | Msa0996170:intron | 30.0% | |
| GAAAACAATTTCCAAGACAA+AGG | + | chr6_4:73861938-73861957 | Msa0996170:intron | 30.0% | |
| ATTTGCATAAACCTTTGTCT+TGG | - | chr6_4:73861952-73861971 | None:intergenic | 30.0% | |
| TGATGATCTAACATTTCTAC+AGG | + | chr6_4:73862060-73862079 | Msa0996170:intron | 30.0% | |
| ATACAGACGACATACATTAA+AGG | + | chr6_4:73862145-73862164 | Msa0996170:CDS | 30.0% | |
| GTGTTCTTAACCTTATAAGA+CGG | - | chr6_4:73862732-73862751 | None:intergenic | 30.0% | |
| GAGAATGTGTTTATAAGTGA+TGG | - | chr6_4:73862755-73862774 | None:intergenic | 30.0% | |
| !! | CTCAAATTCTAAGATGGTAT+CGG | - | chr6_4:73862882-73862901 | None:intergenic | 30.0% |
| ! | ACCATCTTAGAATTTGAGTT+AGG | + | chr6_4:73862884-73862903 | Msa0996170:intron | 30.0% |
| !!! | AGTGTTTTAATGGTTGAGTT+AGG | - | chr6_4:73862910-73862929 | None:intergenic | 30.0% |
| TAACTCAACCATTAAAACAC+TGG | + | chr6_4:73862909-73862928 | Msa0996170:intron | 30.0% | |
| ACAATATGTATTCAAGTGGT+GGG | - | chr6_4:73862960-73862979 | None:intergenic | 30.0% | |
| GCATGTAAATAGCATACTTA+TGG | - | chr6_4:73863039-73863058 | None:intergenic | 30.0% | |
| TAATTATTACGTCAGAGACA+TGG | - | chr6_4:73863081-73863100 | None:intergenic | 30.0% | |
| !! | TGGTTGTTTTGTGTTATGTT+AGG | + | chr6_4:73863103-73863122 | Msa0996170:intron | 30.0% |
| TTATCAAACATTGATGCCAT+AGG | + | chr6_4:73863227-73863246 | Msa0996170:CDS | 30.0% | |
| TAGAATAGTGGTATGCTTAT+AGG | + | chr6_4:73863292-73863311 | Msa0996170:three_prime_UTR | 30.0% | |
| AGAATAGTGGTATGCTTATA+GGG | + | chr6_4:73863293-73863312 | Msa0996170:three_prime_UTR | 30.0% | |
| ATCCATGATCATTTGATTCA+AGG | + | chr6_4:73863422-73863441 | Msa0996170:three_prime_UTR | 30.0% | |
| TTCCTTGAATCAAATGATCA+TGG | - | chr6_4:73863427-73863446 | None:intergenic | 30.0% | |
| !!! | TCATACCTTTTAAGTTCTTC+TGG | - | chr6_4:73861514-73861533 | None:intergenic | 30.0% |
| ATACTATATATCTGTCATGC+AGG | + | chr6_4:73861622-73861641 | Msa0996170:intron | 30.0% | |
| GAAAACAATTTCCAAGACAA+AGG | + | chr6_4:73861938-73861957 | Msa0996170:intron | 30.0% | |
| ATTTGCATAAACCTTTGTCT+TGG | - | chr6_4:73861952-73861971 | None:intergenic | 30.0% | |
| TGATGATCTAACATTTCTAC+AGG | + | chr6_4:73862060-73862079 | Msa0996170:intron | 30.0% | |
| ATACAGACGACATACATTAA+AGG | + | chr6_4:73862145-73862164 | Msa0996170:CDS | 30.0% | |
| GTGTTCTTAACCTTATAAGA+CGG | - | chr6_4:73862732-73862751 | None:intergenic | 30.0% | |
| GAGAATGTGTTTATAAGTGA+TGG | - | chr6_4:73862755-73862774 | None:intergenic | 30.0% | |
| !! | CTCAAATTCTAAGATGGTAT+CGG | - | chr6_4:73862882-73862901 | None:intergenic | 30.0% |
| ! | ACCATCTTAGAATTTGAGTT+AGG | + | chr6_4:73862884-73862903 | Msa0996170:intron | 30.0% |
| !!! | AGTGTTTTAATGGTTGAGTT+AGG | - | chr6_4:73862910-73862929 | None:intergenic | 30.0% |
| TAACTCAACCATTAAAACAC+TGG | + | chr6_4:73862909-73862928 | Msa0996170:intron | 30.0% | |
| ACAATATGTATTCAAGTGGT+GGG | - | chr6_4:73862960-73862979 | None:intergenic | 30.0% | |
| GCATGTAAATAGCATACTTA+TGG | - | chr6_4:73863039-73863058 | None:intergenic | 30.0% | |
| TAATTATTACGTCAGAGACA+TGG | - | chr6_4:73863081-73863100 | None:intergenic | 30.0% | |
| !! | TGGTTGTTTTGTGTTATGTT+AGG | + | chr6_4:73863103-73863122 | Msa0996170:intron | 30.0% |
| TTATCAAACATTGATGCCAT+AGG | + | chr6_4:73863227-73863246 | Msa0996170:CDS | 30.0% | |
| TAGAATAGTGGTATGCTTAT+AGG | + | chr6_4:73863292-73863311 | Msa0996170:three_prime_UTR | 30.0% | |
| AGAATAGTGGTATGCTTATA+GGG | + | chr6_4:73863293-73863312 | Msa0996170:three_prime_UTR | 30.0% | |
| ATCCATGATCATTTGATTCA+AGG | + | chr6_4:73863422-73863441 | Msa0996170:three_prime_UTR | 30.0% | |
| TTCCTTGAATCAAATGATCA+TGG | - | chr6_4:73863427-73863446 | None:intergenic | 30.0% | |
| AACTTGAGAAGATTTGTAGG+AGG | + | chr6_4:73861431-73861450 | Msa0996170:five_prime_UTR | 35.0% | |
| AGGATAGAAATGCAACTTAG+AGG | + | chr6_4:73861451-73861470 | Msa0996170:exon | 35.0% | |
| GCTTACCAGAAGAACTTAAA+AGG | + | chr6_4:73861506-73861525 | Msa0996170:CDS | 35.0% | |
| ! | TTTTCCAGAACCATTTTCTC+AGG | - | chr6_4:73861696-73861715 | None:intergenic | 35.0% |
| ATTGGATTCCAACAAGTTAC+AGG | - | chr6_4:73861905-73861924 | None:intergenic | 35.0% | |
| !!! | GGTTCGAATTTTTTCCCATA+TGG | + | chr6_4:73862081-73862100 | Msa0996170:intron | 35.0% |
| !!! | AATTTTTTCCCATATGGCTG+AGG | + | chr6_4:73862087-73862106 | Msa0996170:CDS | 35.0% |
| AGGAAGTAAATTTCTCAGTC+AGG | + | chr6_4:73862165-73862184 | Msa0996170:CDS | 35.0% | |
| GGAAGTAAATTTCTCAGTCA+GGG | + | chr6_4:73862166-73862185 | Msa0996170:CDS | 35.0% | |
| GTTTATTGTGCGTGGAAAAT+TGG | + | chr6_4:73862210-73862229 | Msa0996170:CDS | 35.0% | |
| ! | CATCGATTAATCATGGTTTG+AGG | - | chr6_4:73862400-73862419 | None:intergenic | 35.0% |
| CAAACCATGATTAATCGATG+TGG | + | chr6_4:73862400-73862419 | Msa0996170:intron | 35.0% | |
| ! | GAAACCACATCGATTAATCA+TGG | - | chr6_4:73862407-73862426 | None:intergenic | 35.0% |
| AAAAATAAAGCTTCACAGCC+AGG | + | chr6_4:73862442-73862461 | Msa0996170:intron | 35.0% | |
| AAAATAAAGCTTCACAGCCA+GGG | + | chr6_4:73862443-73862462 | Msa0996170:intron | 35.0% | |
| AGTAAGATGCTTAACCAATG+TGG | + | chr6_4:73862484-73862503 | Msa0996170:CDS | 35.0% | |
| ! | CTCTTTTCGCAAGATATTTG+CGG | + | chr6_4:73862549-73862568 | Msa0996170:CDS | 35.0% |
| TTATAACTCCTTGAACACGA+GGG | - | chr6_4:73862577-73862596 | None:intergenic | 35.0% | |
| TATTGACACAAAGACAGAAG+GGG | - | chr6_4:73862628-73862647 | None:intergenic | 35.0% | |
| ! | GTATTGACACAAAGACAGAA+GGG | - | chr6_4:73862629-73862648 | None:intergenic | 35.0% |
| !! | AGTATTGACACAAAGACAGA+AGG | - | chr6_4:73862630-73862649 | None:intergenic | 35.0% |
| TCAGACCTTATCTCTTAAGT+GGG | + | chr6_4:73862773-73862792 | Msa0996170:intron | 35.0% | |
| GGCGCATGAATATAAATGAT+GGG | + | chr6_4:73862835-73862854 | Msa0996170:intron | 35.0% | |
| ! | GCATGAATATAAATGATGGG+TGG | + | chr6_4:73862838-73862857 | Msa0996170:intron | 35.0% |
| ! | GCCTAACTCAAATTCTAAGA+TGG | - | chr6_4:73862888-73862907 | None:intergenic | 35.0% |
| !! | CTATCAAGCCAGTGTTTTAA+TGG | - | chr6_4:73862920-73862939 | None:intergenic | 35.0% |
| !! | CATTAAAACACTGGCTTGAT+AGG | + | chr6_4:73862918-73862937 | Msa0996170:intron | 35.0% |
| GACAATATGTATTCAAGTGG+TGG | - | chr6_4:73862961-73862980 | None:intergenic | 35.0% | |
| TTAGGTATGAATCACCTTAC+TGG | + | chr6_4:73863121-73863140 | Msa0996170:intron | 35.0% | |
| CACTTGCAGTAAACAGAATT+CGG | + | chr6_4:73863148-73863167 | Msa0996170:CDS | 35.0% | |
| ACTTGCAGTAAACAGAATTC+GGG | + | chr6_4:73863149-73863168 | Msa0996170:CDS | 35.0% | |
| AAACATTAGAGAAGAGCCTA+TGG | - | chr6_4:73863246-73863265 | None:intergenic | 35.0% | |
| ATTCACTACATTGAAGTCCT+TGG | + | chr6_4:73863267-73863286 | Msa0996170:three_prime_UTR | 35.0% | |
| AAGTCCTTGGAATAGAATAG+TGG | + | chr6_4:73863280-73863299 | Msa0996170:three_prime_UTR | 35.0% | |
| CATACCACTATTCTATTCCA+AGG | - | chr6_4:73863287-73863306 | None:intergenic | 35.0% | |
| TAGGGAGTTATAAAGTAGCT+AGG | + | chr6_4:73863347-73863366 | Msa0996170:three_prime_UTR | 35.0% | |
| AACTTGAGAAGATTTGTAGG+AGG | + | chr6_4:73861431-73861450 | Msa0996170:five_prime_UTR | 35.0% | |
| AGGATAGAAATGCAACTTAG+AGG | + | chr6_4:73861451-73861470 | Msa0996170:exon | 35.0% | |
| GCTTACCAGAAGAACTTAAA+AGG | + | chr6_4:73861506-73861525 | Msa0996170:CDS | 35.0% | |
| ! | TTTTCCAGAACCATTTTCTC+AGG | - | chr6_4:73861696-73861715 | None:intergenic | 35.0% |
| ATTGGATTCCAACAAGTTAC+AGG | - | chr6_4:73861905-73861924 | None:intergenic | 35.0% | |
| !!! | GGTTCGAATTTTTTCCCATA+TGG | + | chr6_4:73862081-73862100 | Msa0996170:intron | 35.0% |
| !!! | AATTTTTTCCCATATGGCTG+AGG | + | chr6_4:73862087-73862106 | Msa0996170:CDS | 35.0% |
| AGGAAGTAAATTTCTCAGTC+AGG | + | chr6_4:73862165-73862184 | Msa0996170:CDS | 35.0% | |
| GGAAGTAAATTTCTCAGTCA+GGG | + | chr6_4:73862166-73862185 | Msa0996170:CDS | 35.0% | |
| GTTTATTGTGCGTGGAAAAT+TGG | + | chr6_4:73862210-73862229 | Msa0996170:CDS | 35.0% | |
| ! | CATCGATTAATCATGGTTTG+AGG | - | chr6_4:73862400-73862419 | None:intergenic | 35.0% |
| CAAACCATGATTAATCGATG+TGG | + | chr6_4:73862400-73862419 | Msa0996170:intron | 35.0% | |
| ! | GAAACCACATCGATTAATCA+TGG | - | chr6_4:73862407-73862426 | None:intergenic | 35.0% |
| AAAAATAAAGCTTCACAGCC+AGG | + | chr6_4:73862442-73862461 | Msa0996170:intron | 35.0% | |
| AAAATAAAGCTTCACAGCCA+GGG | + | chr6_4:73862443-73862462 | Msa0996170:intron | 35.0% | |
| AGTAAGATGCTTAACCAATG+TGG | + | chr6_4:73862484-73862503 | Msa0996170:CDS | 35.0% | |
| ! | CTCTTTTCGCAAGATATTTG+CGG | + | chr6_4:73862549-73862568 | Msa0996170:CDS | 35.0% |
| TTATAACTCCTTGAACACGA+GGG | - | chr6_4:73862577-73862596 | None:intergenic | 35.0% | |
| TATTGACACAAAGACAGAAG+GGG | - | chr6_4:73862628-73862647 | None:intergenic | 35.0% | |
| ! | GTATTGACACAAAGACAGAA+GGG | - | chr6_4:73862629-73862648 | None:intergenic | 35.0% |
| !! | AGTATTGACACAAAGACAGA+AGG | - | chr6_4:73862630-73862649 | None:intergenic | 35.0% |
| TCAGACCTTATCTCTTAAGT+GGG | + | chr6_4:73862773-73862792 | Msa0996170:intron | 35.0% | |
| GGCGCATGAATATAAATGAT+GGG | + | chr6_4:73862835-73862854 | Msa0996170:intron | 35.0% | |
| ! | GCATGAATATAAATGATGGG+TGG | + | chr6_4:73862838-73862857 | Msa0996170:intron | 35.0% |
| ! | GCCTAACTCAAATTCTAAGA+TGG | - | chr6_4:73862888-73862907 | None:intergenic | 35.0% |
| !! | CTATCAAGCCAGTGTTTTAA+TGG | - | chr6_4:73862920-73862939 | None:intergenic | 35.0% |
| !! | CATTAAAACACTGGCTTGAT+AGG | + | chr6_4:73862918-73862937 | Msa0996170:intron | 35.0% |
| GACAATATGTATTCAAGTGG+TGG | - | chr6_4:73862961-73862980 | None:intergenic | 35.0% | |
| TTAGGTATGAATCACCTTAC+TGG | + | chr6_4:73863121-73863140 | Msa0996170:intron | 35.0% | |
| CACTTGCAGTAAACAGAATT+CGG | + | chr6_4:73863148-73863167 | Msa0996170:CDS | 35.0% | |
| ACTTGCAGTAAACAGAATTC+GGG | + | chr6_4:73863149-73863168 | Msa0996170:CDS | 35.0% | |
| AAACATTAGAGAAGAGCCTA+TGG | - | chr6_4:73863246-73863265 | None:intergenic | 35.0% | |
| ATTCACTACATTGAAGTCCT+TGG | + | chr6_4:73863267-73863286 | Msa0996170:three_prime_UTR | 35.0% | |
| AAGTCCTTGGAATAGAATAG+TGG | + | chr6_4:73863280-73863299 | Msa0996170:three_prime_UTR | 35.0% | |
| CATACCACTATTCTATTCCA+AGG | - | chr6_4:73863287-73863306 | None:intergenic | 35.0% | |
| TAGGGAGTTATAAAGTAGCT+AGG | + | chr6_4:73863347-73863366 | Msa0996170:three_prime_UTR | 35.0% | |
| GTTCTTCTGGTAAGCAATGA+TGG | - | chr6_4:73861501-73861520 | None:intergenic | 40.0% | |
| TGTTCCTGAGAAAATGGTTC+TGG | + | chr6_4:73861689-73861708 | Msa0996170:CDS | 40.0% | |
| ! | CTGTATTAGTCTCTCACGAA+TGG | - | chr6_4:73862131-73862150 | None:intergenic | 40.0% |
| AGTAAATTTCTCAGTCAGGG+TGG | + | chr6_4:73862169-73862188 | Msa0996170:CDS | 40.0% | |
| AAGATGGTGTTTATTGTGCG+TGG | + | chr6_4:73862202-73862221 | Msa0996170:CDS | 40.0% | |
| ! | GTGGTGAAGAACTTCTAAGA+TGG | + | chr6_4:73862284-73862303 | Msa0996170:CDS | 40.0% |
| ! | GAACAGTCTTCTGAAAGCAA+AGG | + | chr6_4:73862313-73862332 | Msa0996170:intron | 40.0% |
| ! | GATTGCGACAACTTCTTTTG+AGG | - | chr6_4:73862369-73862388 | None:intergenic | 40.0% |
| AAGATGCTTAACCAATGTGG+AGG | + | chr6_4:73862487-73862506 | Msa0996170:CDS | 40.0% | |
| CTTCTTCAATGTCTTTAGCG+CGG | - | chr6_4:73862523-73862542 | None:intergenic | 40.0% | |
| CTTATAACTCCTTGAACACG+AGG | - | chr6_4:73862578-73862597 | None:intergenic | 40.0% | |
| CTCGTGTTCAAGGAGTTATA+AGG | + | chr6_4:73862576-73862595 | Msa0996170:CDS | 40.0% | |
| !! | TTGCATTTCGGTGTTGTGTT+TGG | + | chr6_4:73862680-73862699 | Msa0996170:intron | 40.0% |
| !! | TGCATTTCGGTGTTGTGTTT+GGG | + | chr6_4:73862681-73862700 | Msa0996170:intron | 40.0% |
| CTCAGACCTTATCTCTTAAG+TGG | + | chr6_4:73862772-73862791 | Msa0996170:intron | 40.0% | |
| CAAGTCCCACTTAAGAGATA+AGG | - | chr6_4:73862781-73862800 | None:intergenic | 40.0% | |
| CTTATCTCTTAAGTGGGACT+TGG | + | chr6_4:73862779-73862798 | Msa0996170:intron | 40.0% | |
| ACAATAGATTCGGGCGTATT+AGG | - | chr6_4:73862811-73862830 | None:intergenic | 40.0% | |
| CGGCGCATGAATATAAATGA+TGG | + | chr6_4:73862834-73862853 | Msa0996170:intron | 40.0% | |
| GATGGGTGGTTCAAATCAAT+AGG | + | chr6_4:73862852-73862871 | Msa0996170:intron | 40.0% | |
| !! | TAAAACACTGGCTTGATAGG+TGG | + | chr6_4:73862921-73862940 | Msa0996170:intron | 40.0% |
| !! | AAAACACTGGCTTGATAGGT+GGG | + | chr6_4:73862922-73862941 | Msa0996170:intron | 40.0% |
| !! | TAAACAGAATTCGGGTTGCA+TGG | + | chr6_4:73863157-73863176 | Msa0996170:CDS | 40.0% |
| GTTCTTCTGGTAAGCAATGA+TGG | - | chr6_4:73861501-73861520 | None:intergenic | 40.0% | |
| TGTTCCTGAGAAAATGGTTC+TGG | + | chr6_4:73861689-73861708 | Msa0996170:CDS | 40.0% | |
| ! | CTGTATTAGTCTCTCACGAA+TGG | - | chr6_4:73862131-73862150 | None:intergenic | 40.0% |
| AGTAAATTTCTCAGTCAGGG+TGG | + | chr6_4:73862169-73862188 | Msa0996170:CDS | 40.0% | |
| AAGATGGTGTTTATTGTGCG+TGG | + | chr6_4:73862202-73862221 | Msa0996170:CDS | 40.0% | |
| ! | GTGGTGAAGAACTTCTAAGA+TGG | + | chr6_4:73862284-73862303 | Msa0996170:CDS | 40.0% |
| ! | GAACAGTCTTCTGAAAGCAA+AGG | + | chr6_4:73862313-73862332 | Msa0996170:intron | 40.0% |
| ! | GATTGCGACAACTTCTTTTG+AGG | - | chr6_4:73862369-73862388 | None:intergenic | 40.0% |
| AAGATGCTTAACCAATGTGG+AGG | + | chr6_4:73862487-73862506 | Msa0996170:CDS | 40.0% | |
| CTTCTTCAATGTCTTTAGCG+CGG | - | chr6_4:73862523-73862542 | None:intergenic | 40.0% | |
| CTTATAACTCCTTGAACACG+AGG | - | chr6_4:73862578-73862597 | None:intergenic | 40.0% | |
| CTCGTGTTCAAGGAGTTATA+AGG | + | chr6_4:73862576-73862595 | Msa0996170:CDS | 40.0% | |
| !! | TTGCATTTCGGTGTTGTGTT+TGG | + | chr6_4:73862680-73862699 | Msa0996170:intron | 40.0% |
| !! | TGCATTTCGGTGTTGTGTTT+GGG | + | chr6_4:73862681-73862700 | Msa0996170:intron | 40.0% |
| CTCAGACCTTATCTCTTAAG+TGG | + | chr6_4:73862772-73862791 | Msa0996170:intron | 40.0% | |
| CAAGTCCCACTTAAGAGATA+AGG | - | chr6_4:73862781-73862800 | None:intergenic | 40.0% | |
| CTTATCTCTTAAGTGGGACT+TGG | + | chr6_4:73862779-73862798 | Msa0996170:intron | 40.0% | |
| ACAATAGATTCGGGCGTATT+AGG | - | chr6_4:73862811-73862830 | None:intergenic | 40.0% | |
| CGGCGCATGAATATAAATGA+TGG | + | chr6_4:73862834-73862853 | Msa0996170:intron | 40.0% | |
| GATGGGTGGTTCAAATCAAT+AGG | + | chr6_4:73862852-73862871 | Msa0996170:intron | 40.0% | |
| !! | TAAAACACTGGCTTGATAGG+TGG | + | chr6_4:73862921-73862940 | Msa0996170:intron | 40.0% |
| !! | AAAACACTGGCTTGATAGGT+GGG | + | chr6_4:73862922-73862941 | Msa0996170:intron | 40.0% |
| !! | TAAACAGAATTCGGGTTGCA+TGG | + | chr6_4:73863157-73863176 | Msa0996170:CDS | 40.0% |
| GTATAGTTGGGCTGCAACAA+GGG | + | chr6_4:73861665-73861684 | Msa0996170:CDS | 45.0% | |
| TATAGTTGGGCTGCAACAAG+GGG | + | chr6_4:73861666-73861685 | Msa0996170:CDS | 45.0% | |
| !! | AAGGGGTGTTCCTGAGAAAA+TGG | + | chr6_4:73861683-73861702 | Msa0996170:CDS | 45.0% |
| ATGTCTGTCTGGAGATCTTC+TGG | - | chr6_4:73861723-73861742 | None:intergenic | 45.0% | |
| ! | CACGAATGGCGTCTAAGATA+GGG | - | chr6_4:73862117-73862136 | None:intergenic | 45.0% |
| ! | TCACGAATGGCGTCTAAGAT+AGG | - | chr6_4:73862118-73862137 | None:intergenic | 45.0% |
| ATTCCGGTTCCGTTATCAGA+AGG | + | chr6_4:73862253-73862272 | Msa0996170:CDS | 45.0% | |
| TTCCGGTTCCGTTATCAGAA+GGG | + | chr6_4:73862254-73862273 | Msa0996170:CDS | 45.0% | |
| CAAGCATCCCCTTCTGATAA+CGG | - | chr6_4:73862265-73862284 | None:intergenic | 45.0% | |
| TTATCAGAAGGGGATGCTTG+TGG | + | chr6_4:73862265-73862284 | Msa0996170:CDS | 45.0% | |
| GATGTGGTTTCTCTTGCAGA+AGG | + | chr6_4:73862416-73862435 | Msa0996170:intron | 45.0% | |
| GAGTGAAAATGCCTCCACAT+TGG | - | chr6_4:73862501-73862520 | None:intergenic | 45.0% | |
| CACAAAGACAGAAGGGGAAT+GGG | - | chr6_4:73862622-73862641 | None:intergenic | 45.0% | |
| ACACAAAGACAGAAGGGGAA+TGG | - | chr6_4:73862623-73862642 | None:intergenic | 45.0% | |
| !! | TTTCGGTGTTGTGTTTGGGT+TGG | + | chr6_4:73862685-73862704 | Msa0996170:intron | 45.0% |
| !! | TTCGGTGTTGTGTTTGGGTT+GGG | + | chr6_4:73862686-73862705 | Msa0996170:intron | 45.0% |
| CCTTATAAGACGGCTCTGTA+GGG | - | chr6_4:73862722-73862741 | None:intergenic | 45.0% | |
| ACCTTATAAGACGGCTCTGT+AGG | - | chr6_4:73862723-73862742 | None:intergenic | 45.0% | |
| ACGCCCGAATCTATTGTACT+CGG | + | chr6_4:73862814-73862833 | Msa0996170:intron | 45.0% | |
| TGCGCCGAGTACAATAGATT+CGG | - | chr6_4:73862821-73862840 | None:intergenic | 45.0% | |
| ACTGCAAGTGATCTCCAGTA+AGG | - | chr6_4:73863138-73863157 | None:intergenic | 45.0% | |
| GTATAGTTGGGCTGCAACAA+GGG | + | chr6_4:73861665-73861684 | Msa0996170:CDS | 45.0% | |
| TATAGTTGGGCTGCAACAAG+GGG | + | chr6_4:73861666-73861685 | Msa0996170:CDS | 45.0% | |
| !! | AAGGGGTGTTCCTGAGAAAA+TGG | + | chr6_4:73861683-73861702 | Msa0996170:CDS | 45.0% |
| ATGTCTGTCTGGAGATCTTC+TGG | - | chr6_4:73861723-73861742 | None:intergenic | 45.0% | |
| ! | CACGAATGGCGTCTAAGATA+GGG | - | chr6_4:73862117-73862136 | None:intergenic | 45.0% |
| ! | TCACGAATGGCGTCTAAGAT+AGG | - | chr6_4:73862118-73862137 | None:intergenic | 45.0% |
| ATTCCGGTTCCGTTATCAGA+AGG | + | chr6_4:73862253-73862272 | Msa0996170:CDS | 45.0% | |
| TTCCGGTTCCGTTATCAGAA+GGG | + | chr6_4:73862254-73862273 | Msa0996170:CDS | 45.0% | |
| CAAGCATCCCCTTCTGATAA+CGG | - | chr6_4:73862265-73862284 | None:intergenic | 45.0% | |
| TTATCAGAAGGGGATGCTTG+TGG | + | chr6_4:73862265-73862284 | Msa0996170:CDS | 45.0% | |
| GATGTGGTTTCTCTTGCAGA+AGG | + | chr6_4:73862416-73862435 | Msa0996170:intron | 45.0% | |
| GAGTGAAAATGCCTCCACAT+TGG | - | chr6_4:73862501-73862520 | None:intergenic | 45.0% | |
| CACAAAGACAGAAGGGGAAT+GGG | - | chr6_4:73862622-73862641 | None:intergenic | 45.0% | |
| ACACAAAGACAGAAGGGGAA+TGG | - | chr6_4:73862623-73862642 | None:intergenic | 45.0% | |
| !! | TTTCGGTGTTGTGTTTGGGT+TGG | + | chr6_4:73862685-73862704 | Msa0996170:intron | 45.0% |
| !! | TTCGGTGTTGTGTTTGGGTT+GGG | + | chr6_4:73862686-73862705 | Msa0996170:intron | 45.0% |
| CCTTATAAGACGGCTCTGTA+GGG | - | chr6_4:73862722-73862741 | None:intergenic | 45.0% | |
| ACCTTATAAGACGGCTCTGT+AGG | - | chr6_4:73862723-73862742 | None:intergenic | 45.0% | |
| ACGCCCGAATCTATTGTACT+CGG | + | chr6_4:73862814-73862833 | Msa0996170:intron | 45.0% | |
| TGCGCCGAGTACAATAGATT+CGG | - | chr6_4:73862821-73862840 | None:intergenic | 45.0% | |
| ACTGCAAGTGATCTCCAGTA+AGG | - | chr6_4:73863138-73863157 | None:intergenic | 45.0% | |
| !!! | AATTTTATTTAAAACATTAT+AGG | - | chr6_4:73861863-73861882 | None:intergenic | 5.0% |
| !!! | AATTTTATTTAAAACATTAT+AGG | - | chr6_4:73861863-73861882 | None:intergenic | 5.0% |
| GAGGTCGTGATGTTGAGCAA+TGG | + | chr6_4:73861470-73861489 | Msa0996170:CDS | 50.0% | |
| ATCTGTCATGCAGGAGAGTG+CGG | + | chr6_4:73861631-73861650 | Msa0996170:intron | 50.0% | |
| GCAGGCTGAACGGTATAGTT+GGG | + | chr6_4:73861653-73861672 | Msa0996170:CDS | 50.0% | |
| GGTATAGTTGGGCTGCAACA+AGG | + | chr6_4:73861664-73861683 | Msa0996170:CDS | 50.0% | |
| GATGGCGTCTTATGTCTGTC+TGG | - | chr6_4:73861734-73861753 | None:intergenic | 50.0% | |
| AGGGTCATCCTCAGCCATAT+GGG | - | chr6_4:73862098-73862117 | None:intergenic | 50.0% | |
| TAGGGTCATCCTCAGCCATA+TGG | - | chr6_4:73862099-73862118 | None:intergenic | 50.0% | |
| !! | GGGTGGTCTTGTACAGAAGA+TGG | + | chr6_4:73862186-73862205 | Msa0996170:CDS | 50.0% |
| ! | CGTGGAAAATTGGAGAGCGT+CGG | + | chr6_4:73862220-73862239 | Msa0996170:CDS | 50.0% |
| !! | AAAATTGGAGAGCGTCGGAG+AGG | + | chr6_4:73862225-73862244 | Msa0996170:CDS | 50.0% |
| TCCGGTTCCGTTATCAGAAG+GGG | + | chr6_4:73862255-73862274 | Msa0996170:CDS | 50.0% | |
| !! | TCCCCTTCTGATAACGGAAC+CGG | - | chr6_4:73862259-73862278 | None:intergenic | 50.0% |
| TTCTGTCGCTAGTCAAACCC+TGG | - | chr6_4:73862463-73862482 | None:intergenic | 50.0% | |
| AAGACAGAAGGGGAATGGGA+TGG | - | chr6_4:73862618-73862637 | None:intergenic | 50.0% | |
| CCCTACAGAGCCGTCTTATA+AGG | + | chr6_4:73862719-73862738 | Msa0996170:intron | 50.0% | |
| GCGCCGAGTACAATAGATTC+GGG | - | chr6_4:73862820-73862839 | None:intergenic | 50.0% | |
| !! | TTCGGGTTGCATGGAGATAC+AGG | + | chr6_4:73863166-73863185 | Msa0996170:CDS | 50.0% |
| GAGGTCGTGATGTTGAGCAA+TGG | + | chr6_4:73861470-73861489 | Msa0996170:CDS | 50.0% | |
| ATCTGTCATGCAGGAGAGTG+CGG | + | chr6_4:73861631-73861650 | Msa0996170:intron | 50.0% | |
| GCAGGCTGAACGGTATAGTT+GGG | + | chr6_4:73861653-73861672 | Msa0996170:CDS | 50.0% | |
| GGTATAGTTGGGCTGCAACA+AGG | + | chr6_4:73861664-73861683 | Msa0996170:CDS | 50.0% | |
| GATGGCGTCTTATGTCTGTC+TGG | - | chr6_4:73861734-73861753 | None:intergenic | 50.0% | |
| AGGGTCATCCTCAGCCATAT+GGG | - | chr6_4:73862098-73862117 | None:intergenic | 50.0% | |
| TAGGGTCATCCTCAGCCATA+TGG | - | chr6_4:73862099-73862118 | None:intergenic | 50.0% | |
| !! | GGGTGGTCTTGTACAGAAGA+TGG | + | chr6_4:73862186-73862205 | Msa0996170:CDS | 50.0% |
| ! | CGTGGAAAATTGGAGAGCGT+CGG | + | chr6_4:73862220-73862239 | Msa0996170:CDS | 50.0% |
| !! | AAAATTGGAGAGCGTCGGAG+AGG | + | chr6_4:73862225-73862244 | Msa0996170:CDS | 50.0% |
| TCCGGTTCCGTTATCAGAAG+GGG | + | chr6_4:73862255-73862274 | Msa0996170:CDS | 50.0% | |
| !! | TCCCCTTCTGATAACGGAAC+CGG | - | chr6_4:73862259-73862278 | None:intergenic | 50.0% |
| TTCTGTCGCTAGTCAAACCC+TGG | - | chr6_4:73862463-73862482 | None:intergenic | 50.0% | |
| AAGACAGAAGGGGAATGGGA+TGG | - | chr6_4:73862618-73862637 | None:intergenic | 50.0% | |
| CCCTACAGAGCCGTCTTATA+AGG | + | chr6_4:73862719-73862738 | Msa0996170:intron | 50.0% | |
| GCGCCGAGTACAATAGATTC+GGG | - | chr6_4:73862820-73862839 | None:intergenic | 50.0% | |
| !! | TTCGGGTTGCATGGAGATAC+AGG | + | chr6_4:73863166-73863185 | Msa0996170:CDS | 50.0% |
| GGCAGGCTGAACGGTATAGT+TGG | + | chr6_4:73861652-73861671 | Msa0996170:CDS | 55.0% | |
| AGTTACAGGCAGACGCGTAG+AGG | - | chr6_4:73861891-73861910 | None:intergenic | 55.0% | |
| ! | CGCGTCTGCCTGTAACTTGT+TGG | + | chr6_4:73861894-73861913 | Msa0996170:intron | 55.0% |
| CGTCGGAGAGGATGGAATTC+CGG | + | chr6_4:73862237-73862256 | Msa0996170:CDS | 55.0% | |
| GGCAGGCTGAACGGTATAGT+TGG | + | chr6_4:73861652-73861671 | Msa0996170:CDS | 55.0% | |
| AGTTACAGGCAGACGCGTAG+AGG | - | chr6_4:73861891-73861910 | None:intergenic | 55.0% | |
| ! | CGCGTCTGCCTGTAACTTGT+TGG | + | chr6_4:73861894-73861913 | Msa0996170:intron | 55.0% |
| CGTCGGAGAGGATGGAATTC+CGG | + | chr6_4:73862237-73862256 | Msa0996170:CDS | 55.0% | |
| !! | TTGGAGAGCGTCGGAGAGGA+TGG | + | chr6_4:73862229-73862248 | Msa0996170:CDS | 60.0% |
| TTGCGGAGCCCTCGTGTTCA+AGG | + | chr6_4:73862566-73862585 | Msa0996170:CDS | 60.0% | |
| !! | TTGGAGAGCGTCGGAGAGGA+TGG | + | chr6_4:73862229-73862248 | Msa0996170:CDS | 60.0% |
| TTGCGGAGCCCTCGTGTTCA+AGG | + | chr6_4:73862566-73862585 | Msa0996170:CDS | 60.0% | |
| ! | GTCATGCAGGAGAGTGCGGC+AGG | + | chr6_4:73861635-73861654 | Msa0996170:intron | 65.0% |
| ! | GGAGAGTGCGGCAGGCTGAA+CGG | + | chr6_4:73861643-73861662 | Msa0996170:intron | 65.0% |
| ! | GTCATGCAGGAGAGTGCGGC+AGG | + | chr6_4:73861635-73861654 | Msa0996170:intron | 65.0% |
| ! | GGAGAGTGCGGCAGGCTGAA+CGG | + | chr6_4:73861643-73861662 | Msa0996170:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 73861418 | 73863458 | 73861418 | ID=Msa0996170;Name=Msa0996170 |
| chr6_4 | mRNA | 73861418 | 73863458 | 73861418 | ID=Msa0996170-mRNA-1;Parent=Msa0996170;Name=Msa0996170-mRNA-1;_AED=0.02;_eAED=0.02;_QI=42|0.75|0.6|1|0.75|0.6|5|210|231 |
| chr6_4 | exon | 73861418 | 73861527 | 73861418 | ID=Msa0996170-mRNA-1:exon:13752;Parent=Msa0996170-mRNA-1 |
| chr6_4 | exon | 73861644 | 73861773 | 73861644 | ID=Msa0996170-mRNA-1:exon:13753;Parent=Msa0996170-mRNA-1 |
| chr6_4 | exon | 73862082 | 73862317 | 73862082 | ID=Msa0996170-mRNA-1:exon:13754;Parent=Msa0996170-mRNA-1 |
| chr6_4 | exon | 73862460 | 73862597 | 73862460 | ID=Msa0996170-mRNA-1:exon:13755;Parent=Msa0996170-mRNA-1 |
| chr6_4 | exon | 73863125 | 73863458 | 73863125 | ID=Msa0996170-mRNA-1:exon:13756;Parent=Msa0996170-mRNA-1 |
| chr6_4 | five_prime_UTR | 73861418 | 73861459 | 73861418 | ID=Msa0996170-mRNA-1:five_prime_utr;Parent=Msa0996170-mRNA-1 |
| chr6_4 | CDS | 73861460 | 73861527 | 73861460 | ID=Msa0996170-mRNA-1:cds;Parent=Msa0996170-mRNA-1 |
| chr6_4 | CDS | 73861644 | 73861773 | 73861644 | ID=Msa0996170-mRNA-1:cds;Parent=Msa0996170-mRNA-1 |
| chr6_4 | CDS | 73862082 | 73862317 | 73862082 | ID=Msa0996170-mRNA-1:cds;Parent=Msa0996170-mRNA-1 |
| chr6_4 | CDS | 73862460 | 73862597 | 73862460 | ID=Msa0996170-mRNA-1:cds;Parent=Msa0996170-mRNA-1 |
| chr6_4 | CDS | 73863125 | 73863248 | 73863125 | ID=Msa0996170-mRNA-1:cds;Parent=Msa0996170-mRNA-1 |
| chr6_4 | three_prime_UTR | 73863249 | 73863458 | 73863249 | ID=Msa0996170-mRNA-1:three_prime_utr;Parent=Msa0996170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
