AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0058300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0058300 MtrunA17_Chr1g0155141 97.017 704 18 2 1 704 1 701 0.0 1412
Msa0058300 MtrunA17_Chr3g0130381 50.284 529 241 5 196 704 252 778 0.0 592
Msa0058300 MtrunA17_Chr8g0384431 43.032 653 331 9 58 682 147 786 0.0 569
Msa0058300 MtrunA17_Chr3g0125511 41.071 728 376 12 13 704 34 744 0.0 566
Msa0058300 MtrunA17_Chr8g0372471 45.594 522 265 7 199 704 374 892 6.66e-175 523
Msa0058300 MtrunA17_Chr5g0437501 42.703 555 290 9 171 704 60 607 1.13e-159 474
Msa0058300 MtrunA17_Chr3g0113981 43.585 530 269 11 194 704 152 670 2.08e-149 450
Msa0058300 MtrunA17_Chr1g0159741 42.574 505 254 13 202 681 141 634 1.40e-122 380
Msa0058300 MtrunA17_Chr3g0112341 40.079 509 268 14 201 685 152 647 2.25e-120 375
Msa0058300 MtrunA17_Chr5g0435751 39.489 509 251 15 201 685 124 599 1.17e-109 345
Msa0058300 MtrunA17_Chr8g0369481 36.832 524 286 14 211 702 78 588 2.63e-107 338
Msa0058300 MtrunA17_Chr5g0409411 36.122 526 291 14 211 704 80 592 3.33e-106 335
Msa0058300 MtrunA17_Chr1g0167381 35.135 592 323 16 161 702 35 615 1.36e-105 335
Msa0058300 MtrunA17_Chr1g0183721 38.277 499 274 11 230 702 95 585 3.11e-105 333
Msa0058300 MtrunA17_Chr6g0472571 37.266 534 281 17 207 702 109 626 2.84e-104 332
Msa0058300 MtrunA17_Chr5g0404761 49.643 280 124 5 436 704 1 274 7.83e-102 313
Msa0058300 MtrunA17_Chr1g0187601 34.906 530 306 11 204 702 93 614 3.97e-100 320
Msa0058300 MtrunA17_Chr1g0203741 37.547 530 277 17 213 702 102 617 3.23e-99 318
Msa0058300 MtrunA17_Chr8g0350391 36.075 535 286 17 209 702 111 630 5.75e-99 318
Msa0058300 MtrunA17_Chr8g0388881 35.104 527 291 16 213 702 108 620 2.38e-97 313
Msa0058300 MtrunA17_Chr4g0055031 35.393 534 296 16 202 702 86 603 3.02e-95 307
Msa0058300 MtrunA17_Chr7g0214551 35.992 514 284 16 202 682 43 544 1.27e-94 304
Msa0058300 MtrunA17_Chr8g0350351 35.471 499 281 13 230 702 117 600 1.23e-93 303
Msa0058300 MtrunA17_Chr7g0246701 34.848 528 293 16 213 702 111 625 2.24e-92 300
Msa0058300 MtrunA17_Chr8g0361791 33.026 542 312 16 195 702 76 600 4.85e-90 293
Msa0058300 MtrunA17_Chr7g0246681 34.400 500 287 14 230 703 104 588 5.98e-89 290
Msa0058300 MtrunA17_Chr3g0092501 34.351 524 291 17 212 702 94 597 8.53e-87 285
Msa0058300 MtrunA17_Chr5g0416991 33.146 534 306 15 202 702 84 599 6.82e-86 282
Msa0058300 MtrunA17_Chr1g0171781 32.432 518 312 12 213 702 96 603 9.84e-86 282
Msa0058300 MtrunA17_Chr5g0426281 31.295 556 303 18 201 703 142 671 5.53e-78 263
Msa0058300 MtrunA17_Chr3g0115931 31.346 520 298 19 212 685 163 669 3.71e-72 248
Msa0058300 MtrunA17_Chr5g0404771 35.556 405 236 7 38 424 147 544 7.97e-72 244
Msa0058300 MtrunA17_Chr4g0043131 51.748 143 63 4 562 699 39 180 2.48e-37 137
Msa0058300 MtrunA17_Chr4g0043121 26.433 314 203 10 208 501 91 396 6.33e-34 135
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0058300 AT1G19430.1 62.361 720 250 6 1 704 10 724 0.0 927
Msa0058300 AT1G19430.3 62.361 720 250 6 1 704 10 724 0.0 927
Msa0058300 AT1G19430.2 58.983 590 221 6 1 574 10 594 0.0 703
Msa0058300 AT5G64030.1 45.380 606 297 7 119 704 227 818 0.0 584
Msa0058300 AT1G29470.1 40.736 761 375 16 8 704 11 759 0.0 572
Msa0058300 AT1G29470.2 40.736 761 375 16 8 704 11 759 0.0 572
Msa0058300 AT2G34300.2 39.096 752 400 8 8 704 11 759 0.0 568
Msa0058300 AT2G34300.3 39.096 752 400 8 8 704 11 759 0.0 568
Msa0058300 AT2G34300.1 39.096 752 400 8 8 704 11 759 0.0 568
Msa0058300 AT3G51070.1 47.036 523 255 6 202 704 371 891 0.0 560
Msa0058300 AT3G51070.2 47.289 461 222 5 202 642 371 830 8.16e-165 495
Msa0058300 AT2G40280.1 45.455 517 257 12 201 704 79 583 4.64e-154 459
Msa0058300 AT3G56080.1 43.436 518 264 12 202 704 107 610 6.15e-147 442
Msa0058300 AT3G56080.2 43.488 453 232 9 202 639 107 550 3.17e-130 396
Msa0058300 AT5G06050.1 39.153 567 307 18 142 685 92 643 5.76e-126 390
Msa0058300 AT2G39750.1 40.472 509 266 14 201 685 176 671 1.06e-122 382
Msa0058300 AT1G77260.1 39.200 500 275 14 201 681 142 631 3.08e-116 363
Msa0058300 AT4G19120.1 36.260 524 291 13 211 702 78 590 1.01e-106 337
Msa0058300 AT4G19120.2 36.260 524 291 13 211 702 78 590 1.01e-106 337
Msa0058300 AT1G31850.1 34.733 524 299 12 211 702 84 596 2.18e-106 336
Msa0058300 AT1G31850.2 34.733 524 299 12 211 702 84 596 2.18e-106 336
Msa0058300 AT1G31850.4 34.733 524 299 12 211 702 84 596 2.18e-106 336
Msa0058300 AT1G31850.3 34.733 524 299 12 211 702 84 596 2.18e-106 336
Msa0058300 AT4G14360.1 36.382 503 288 11 204 682 78 572 2.42e-102 326
Msa0058300 AT4G14360.2 36.382 503 288 11 204 682 78 572 2.42e-102 326
Msa0058300 AT3G23300.2 35.539 529 303 12 204 702 81 601 4.19e-101 323
Msa0058300 AT3G23300.1 35.539 529 303 12 204 702 81 601 4.19e-101 323
Msa0058300 AT1G04430.1 36.634 505 284 13 204 682 86 580 4.96e-100 320
Msa0058300 AT1G04430.3 36.634 505 284 13 204 682 86 580 4.96e-100 320
Msa0058300 AT1G04430.2 36.634 505 284 13 204 682 86 580 4.96e-100 320
Msa0058300 AT1G33170.1 34.414 555 306 15 194 702 92 634 9.95e-99 317
Msa0058300 AT4G10440.1 34.128 545 313 14 193 702 83 616 9.54e-98 315
Msa0058300 AT4G00740.1 36.200 500 278 15 230 703 110 594 1.63e-97 313
Msa0058300 AT4G00740.2 36.200 500 278 15 230 703 110 594 1.63e-97 313
Msa0058300 AT2G45750.1 34.146 533 294 16 213 702 97 615 5.29e-95 307
Msa0058300 AT5G04060.1 34.741 521 293 14 213 702 93 597 1.06e-93 303
Msa0058300 AT5G14430.1 35.084 533 302 13 204 702 82 604 5.52e-92 299
Msa0058300 AT2G43200.2 35.283 513 289 14 212 695 100 598 1.17e-91 298
Msa0058300 AT2G43200.1 35.283 513 289 14 212 695 100 598 1.17e-91 298
Msa0058300 AT4G00750.1 34.270 534 290 18 213 702 106 622 5.15e-91 297
Msa0058300 AT3G10200.1 33.525 522 302 13 206 702 87 588 1.63e-90 294
Msa0058300 AT5G14430.2 34.709 533 304 13 204 702 82 604 2.34e-90 295
Msa0058300 AT4G18030.1 33.771 533 307 15 202 702 85 603 7.28e-90 293
Msa0058300 AT1G26850.2 32.965 543 296 19 205 702 89 608 3.29e-86 284
Msa0058300 AT1G26850.1 32.965 543 296 19 205 702 89 608 3.29e-86 284
Msa0058300 AT3G10200.2 34.395 471 269 12 206 656 87 537 1.45e-83 276
Msa0058300 AT4G19120.3 35.335 433 239 12 211 613 78 499 6.49e-79 261
Msa0058300 AT1G78240.1 30.639 532 309 16 201 685 142 660 8.44e-74 252
Msa0058300 AT1G78240.2 30.639 532 309 16 201 685 142 660 8.44e-74 252
Msa0058300 AT1G13860.4 31.238 541 303 17 208 703 86 602 2.47e-73 249
Msa0058300 AT1G13860.3 31.238 541 303 17 208 703 86 602 2.47e-73 249
Msa0058300 AT1G13860.1 31.238 541 303 17 208 703 86 602 2.47e-73 249
Msa0058300 AT1G13860.5 31.238 541 303 17 208 703 86 602 2.47e-73 249
Msa0058300 AT2G03480.2 31.609 522 305 15 208 699 91 590 5.92e-70 239
Msa0058300 AT2G03480.1 30.912 537 300 15 208 699 91 601 5.98e-69 237
Msa0058300 AT1G13860.2 32.599 454 250 13 291 703 8 446 1.34e-68 232
Msa0058300 AT1G26850.3 28.972 428 246 14 205 594 89 496 1.97e-48 178
Msa0058300 AT2G03480.3 27.760 317 195 10 208 501 91 396 2.86e-30 124

Find 162 sgRNAs with CRISPR-Local

Find 353 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGACAGCTGTAACAATTT+TGG 0.157752 1_2:+14628345 Msa0058300:CDS
TAATCAACTTAATGTGTAAA+AGG 0.205128 1_2:+14633345 Msa0058300:three_prime_UTR
CATCGTTGGTTGGTGGATTC+TGG 0.212517 1_2:+14629854 Msa0058300:CDS
ATATTTCCTCCAATGCATTT+AGG 0.247505 1_2:-14633111 None:intergenic
ATGGTTCCTCTTCCTCTTGA+TGG 0.249826 1_2:+14629021 Msa0058300:CDS
CTCTATTTGTTGGAATGTTC+TGG 0.254507 1_2:+14631723 Msa0058300:CDS
AATCAAATGTTAACTATAGA+TGG 0.266871 1_2:+14628878 Msa0058300:CDS
CACGATTGGTGCGAGTCTTT+TGG 0.275475 1_2:+14632586 Msa0058300:CDS
TAATATATGCAGCTAGTTTC+GGG 0.294319 1_2:-14629826 None:intergenic
TTAATATATGCAGCTAGTTT+CGG 0.296241 1_2:-14629827 None:intergenic
CTCTATCTAAACATAACGTT+TGG 0.325301 1_2:+14632488 Msa0058300:CDS
TCATGAGAGTGAAGTTGATT+TGG 0.338378 1_2:+14628744 Msa0058300:CDS
TCCTGACTGGATGAACAATA+AGG 0.340719 1_2:+14632069 Msa0058300:CDS
CTAAAAGACCAACTGGGTTA+TGG 0.341620 1_2:+14628317 Msa0058300:CDS
GCTGGCATACCCTCCATAGA+TGG 0.347147 1_2:-14632200 None:intergenic
CGCAGCTGCTCTCTTCGATA+AGG 0.356939 1_2:+14630312 Msa0058300:CDS
CGATGAAGATTCTGAGATAT+TGG 0.360316 1_2:+14628807 Msa0058300:CDS
TCAATGGAATGGGCATTAAC+TGG 0.363494 1_2:+14632146 Msa0058300:CDS
CGCGCCACTTCTTTCTTATG+AGG 0.368271 1_2:-14628607 None:intergenic
TCGTATATGTCATTTCCTTC+AGG 0.373427 1_2:-14631796 None:intergenic
GAGATATGACTTGTTAACTA+TGG 0.375456 1_2:-14632125 None:intergenic
TAAAAGACCAACTGGGTTAT+GGG 0.378287 1_2:+14628318 Msa0058300:CDS
CACTGACAGCCTCTATTTGT+TGG 0.385291 1_2:+14631713 Msa0058300:CDS
ATGAAAATCCCGACGCAGTC+TGG 0.390934 1_2:+14631857 Msa0058300:CDS
AAAATTATGGGAAGCGTATC+CGG 0.395966 1_2:-14632538 None:intergenic
CGTCAAGCTAAAAGACCAAC+TGG 0.396592 1_2:+14628310 Msa0058300:CDS
AGCCTCTTCGGCCATTCCTC+AGG 0.398893 1_2:-14632037 None:intergenic
GGAAGATAAAGAAGAAGGAT+TGG 0.399828 1_2:+14628720 Msa0058300:CDS
AGTGATGATGTTGGTGAAGT+TGG 0.403680 1_2:+14631754 Msa0058300:CDS
GCATTAACTGGACAAATATC+AGG 0.404692 1_2:+14632158 Msa0058300:CDS
TCCTTATTGTTCATCCAGTC+AGG 0.410033 1_2:-14632070 None:intergenic
GGAAGTCTCCTTCTAGCAAA+AGG 0.412928 1_2:-14630424 None:intergenic
TATACCTTCAATTTGCTCTC+AGG 0.413276 1_2:-14629066 None:intergenic
TGTTTGCACACCATTCCAAT+TGG 0.418735 1_2:+14631989 Msa0058300:CDS
GAATGTGAATCAAGGGTCAT+TGG 0.427690 1_2:+14628669 Msa0058300:CDS
ATGGACATGAAATCCATCTA+TGG 0.430968 1_2:+14632187 Msa0058300:CDS
CCATGCTGTTCAATTCCAAT+TGG 0.431043 1_2:-14632004 None:intergenic
GCAGCTGCTCTCTTCGATAA+GGG 0.439107 1_2:+14630313 Msa0058300:CDS
GGAAAAGTTTCGAGCCTCTT+CGG 0.440914 1_2:-14632049 None:intergenic
TCTATCTAAACATAACGTTT+GGG 0.453133 1_2:+14632489 Msa0058300:CDS
AACTTCTACTGGAGATGAAT+CGG 0.456963 1_2:+14630632 Msa0058300:CDS
GGTATATATTAGAGGGTTCA+AGG 0.458635 1_2:-14633217 None:intergenic
TGCAGAAGGTCATAAGTTCT+TGG 0.460158 1_2:-14632616 None:intergenic
AAGGATGCCCTTCATGTGTA+TGG 0.465411 1_2:+14629002 Msa0058300:CDS
AGAGTTAAAGAAAACAAAGA+AGG 0.466174 1_2:+14628831 Msa0058300:CDS
TTCAATTTGCTCTCAGGCCA+CGG 0.468060 1_2:-14629060 None:intergenic
AGCGTATCCGGTGCATGGAC+AGG 0.477410 1_2:-14632526 None:intergenic
TTGCTCTCAGGCCACGGCAC+CGG 0.477467 1_2:-14629054 None:intergenic
ATCAAGTCATGGTGGGACTC+TGG 0.478808 1_2:-14633268 None:intergenic
ATACACATGAAGGGCATCCT+TGG 0.479666 1_2:-14629000 None:intergenic
GCAAAAGGGCTAACCAATGT+TGG 0.480251 1_2:-14630409 None:intergenic
GCAGCATACCAGACTGCGTC+GGG 0.480849 1_2:-14631865 None:intergenic
AAGTCATATCTCAATGGAAT+GGG 0.482780 1_2:+14632136 Msa0058300:CDS
CCTTGCATTGATATCGAAGT+AGG 0.484188 1_2:+14628937 Msa0058300:CDS
GACAAATATCAGGAATGTAA+TGG 0.487358 1_2:+14632168 Msa0058300:CDS
AATAAAGAGAATGTGAATCA+AGG 0.491660 1_2:+14628661 Msa0058300:CDS
AATATTGAGAAGTATGCAAT+GGG 0.493277 1_2:+14633129 Msa0058300:CDS
TTGAGATGGACCGTATCTTA+CGG 0.493909 1_2:+14633050 Msa0058300:CDS
CAAAAGGGCTAACCAATGTT+GGG 0.497358 1_2:-14630408 None:intergenic
TCTTGATGGTTATGAGTCTC+CGG 0.498170 1_2:+14629035 Msa0058300:CDS
TATGTGCACAGAAAACTCTA+TGG 0.503076 1_2:+14633191 Msa0058300:CDS
TGTTCTCACGCCTCAAAAGC+AGG 0.503114 1_2:+14632650 Msa0058300:CDS
CAATTGGAATTGAACAGCAT+GGG 0.508639 1_2:+14632005 Msa0058300:CDS
AGAAAGATCATAAATTTCAT+AGG 0.510069 1_2:+14628530 Msa0058300:CDS
AGTTGAAATCCTAAATGCAT+TGG 0.511405 1_2:+14633102 Msa0058300:CDS
ACCCTCCTGGCCGTAAGATA+CGG 0.511729 1_2:-14633060 None:intergenic
TCAAGGGTCATTGGAGAAAG+AGG 0.512731 1_2:+14628678 Msa0058300:CDS
TTGGATTCTGATGTTGTTGG+TGG 0.513871 1_2:+14628763 Msa0058300:CDS
GATAGCATTGAAGAAGAAGA+AGG 0.514633 1_2:+14630697 Msa0058300:CDS
CAAGTCATATCTCAATGGAA+TGG 0.517713 1_2:+14632135 Msa0058300:CDS
AGAGGCTGTCAGTGCGGTCA+TGG 0.519681 1_2:-14631704 None:intergenic
GAGTTGGAAGATAAAGAAGA+AGG 0.521615 1_2:+14628715 Msa0058300:CDS
CCACTTGAGCTAAGTCCACT+AGG 0.524362 1_2:-14630369 None:intergenic
TGAAATCCTAAATGCATTGG+AGG 0.524906 1_2:+14633105 Msa0058300:CDS
GATTTGGATTCTGATGTTGT+TGG 0.526320 1_2:+14628760 Msa0058300:CDS
CAGAACATTCCAACAAATAG+AGG 0.526503 1_2:-14631722 None:intergenic
CGTATGATCGTCAACCCTCC+TGG 0.526562 1_2:-14633073 None:intergenic
TGATCGCGGACACCAACCAT+TGG 0.528068 1_2:+14632098 Msa0058300:CDS
GTGTGCAAACAAGTCTTGAT+TGG 0.528299 1_2:-14631977 None:intergenic
ATAAAGAGAATGTGAATCAA+GGG 0.529921 1_2:+14628662 Msa0058300:CDS
GTGGTGGAAAGGTGCAGTAC+CGG 0.532025 1_2:+14628959 Msa0058300:CDS
CCAATTGGAATTGAACAGCA+TGG 0.533438 1_2:+14632004 Msa0058300:CDS
GAGTTAAAGAAAACAAAGAA+GGG 0.534176 1_2:+14628832 Msa0058300:CDS
GACAACTCCTCTCCGTGTGC+CGG 0.534753 1_2:-14628978 None:intergenic
GGGCAGAGTGGCCTGAGGAA+TGG 0.534846 1_2:+14632026 Msa0058300:CDS
TCATAACCATCAAGAGGAAG+AGG 0.538678 1_2:-14629027 None:intergenic
GAAGTCTCCTTCTAGCAAAA+GGG 0.539434 1_2:-14630423 None:intergenic
TTAACATTTGATTCAAACAA+AGG 0.539982 1_2:-14628868 None:intergenic
AACTATGGCGTTCCAATGGT+TGG 0.540107 1_2:-14632110 None:intergenic
GCGCCACTTCTTTCTTATGA+GGG 0.540710 1_2:-14628606 None:intergenic
AAGAGGAACCATACACATGA+AGG 0.545446 1_2:-14629010 None:intergenic
GTTAACAAGTCATATCTCAA+TGG 0.546595 1_2:+14632130 Msa0058300:CDS
AGCATACCTTGGCATTCCAA+TGG 0.553335 1_2:+14630490 Msa0058300:CDS
AATCAGAATGACTTTCTACC+AGG 0.554059 1_2:+14633153 Msa0058300:CDS
ATTCGTGTTGTCCTGGACAT+TGG 0.555137 1_2:+14630271 Msa0058300:CDS
AGTCGAGGGAAAGAATATCA+TGG 0.558818 1_2:-14633298 None:intergenic
TGTTTGAAGAAATAGAACAT+TGG 0.560848 1_2:+14633469 Msa0058300:three_prime_UTR
ATGGACCGTATCTTACGGCC+AGG 0.560956 1_2:+14633055 Msa0058300:CDS
AATCTGTACATCCAATGTCC+AGG 0.561710 1_2:-14630282 None:intergenic
AAATATTGAGAAGTATGCAA+TGG 0.561804 1_2:+14633128 Msa0058300:CDS
TGGGAAGCGTATCCGGTGCA+TGG 0.562242 1_2:-14632531 None:intergenic
TGTTAACTATGGCGTTCCAA+TGG 0.562942 1_2:-14632114 None:intergenic
CCTAGTGGACTTAGCTCAAG+TGG 0.563137 1_2:+14630369 Msa0058300:CDS
AGATGGTACCAGACATTGAG+TGG 0.564162 1_2:+14630239 Msa0058300:intron
CGAGCGCGGCTTCCCAACAT+TGG 0.565538 1_2:+14630396 Msa0058300:CDS
GTGCACGTTGCAGCATACCT+TGG 0.566173 1_2:+14630479 Msa0058300:CDS
ACAAAGAAGGGAAAAGTGAA+AGG 0.567820 1_2:+14628844 Msa0058300:CDS
ATGACATATACGAATTGAGA+AGG 0.575466 1_2:+14631806 Msa0058300:CDS
GTGGCCTGAGAGCAAATTGA+AGG 0.576440 1_2:+14629062 Msa0058300:CDS
AAAGAAACGTGTGCATAAGA+AGG 0.577823 1_2:+14628633 Msa0058300:CDS
GAGAGATAACAATTCAATGT+GGG 0.586661 1_2:+14633501 Msa0058300:three_prime_UTR
ACAAATGATCAGCATGCAGA+AGG 0.594137 1_2:-14632630 None:intergenic
CTATCTTGAGTCGATTGAAG+AGG 0.595938 1_2:+14629931 Msa0058300:CDS
CTGTTCAATTCCAATTGGAA+TGG 0.597922 1_2:-14631999 None:intergenic
GCTCAAGTGGCACTCGAGCG+CGG 0.598647 1_2:+14630382 Msa0058300:CDS
ATGGAATTTGAATCAAGTCA+TGG 0.598850 1_2:-14633279 None:intergenic
TACAAACCATTGGAATGCCA+AGG 0.599774 1_2:-14630496 None:intergenic
GACATGAAATCCATCTATGG+AGG 0.599957 1_2:+14632190 Msa0058300:CDS
TGTAGTACCTGTCCATGCAC+CGG 0.602517 1_2:+14632519 Msa0058300:CDS
TCATTGGAGAAAGAGGAAGA+AGG 0.607017 1_2:+14628685 Msa0058300:CDS
ATCTTCACCCATAACCCAGT+TGG 0.609231 1_2:-14628325 None:intergenic
GCGCCCTCATAAGAAAGAAG+TGG 0.610087 1_2:+14628603 Msa0058300:CDS
TGCAGTACCGGCACACGGAG+AGG 0.611552 1_2:+14628971 Msa0058300:CDS
TATCTCAGAATCTTCATCGA+CGG 0.613988 1_2:-14628803 None:intergenic
ACCGTATCTTACGGCCAGGA+GGG 0.614741 1_2:+14633059 Msa0058300:CDS
TGTGTCGATTGTTGTTGAGA+TGG 0.618841 1_2:+14633036 Msa0058300:CDS
AGAGAGATAACAATTCAATG+TGG 0.621173 1_2:+14633500 Msa0058300:three_prime_UTR
ATTGATATCGAAGTAGGTGG+TGG 0.622929 1_2:+14628943 Msa0058300:CDS
TTGATTCACGTGTAAGTCGA+GGG 0.625600 1_2:-14633312 None:intergenic
ATTGATTCACGTGTAAGTCG+AGG 0.625907 1_2:-14633313 None:intergenic
AATTGGAATTGAACAGCATG+GGG 0.627104 1_2:+14632006 Msa0058300:CDS
GGCCTGAGGAATGGCCGAAG+AGG 0.629075 1_2:+14632035 Msa0058300:CDS
AGAATATATCAAAAGCCTGA+AGG 0.629533 1_2:+14631781 Msa0058300:CDS
ACACGGAGAGGAGTTGTCCA+AGG 0.632925 1_2:+14628983 Msa0058300:CDS
AATCGGATTCTAAGACCTGG+TGG 0.635756 1_2:+14630649 Msa0058300:CDS
GATGGTACCAGACATTGAGT+GGG 0.637533 1_2:+14630240 Msa0058300:intron
GTTATGAGTCTCCGGTGCCG+TGG 0.638672 1_2:+14629043 Msa0058300:CDS
GACCGTATCTTACGGCCAGG+AGG 0.642174 1_2:+14633058 Msa0058300:CDS
TATCGAAGTAGGTGGTGGAA+AGG 0.642635 1_2:+14628948 Msa0058300:CDS
GAATTTGAATCAAGTCATGG+TGG 0.644298 1_2:-14633276 None:intergenic
GAAACGTGTGCATAAGAAGG+AGG 0.648185 1_2:+14628636 Msa0058300:CDS
AGAGGAACCATACACATGAA+GGG 0.652407 1_2:-14629009 None:intergenic
ACATGAAATCCATCTATGGA+GGG 0.652438 1_2:+14632191 Msa0058300:CDS
ATGAATCGGATTCTAAGACC+TGG 0.653113 1_2:+14630646 Msa0058300:CDS
AATTTGAATCAAGTCATGGT+GGG 0.654326 1_2:-14633275 None:intergenic
CATAAGAAAGAAGTGGCGCG+TGG 0.655219 1_2:+14628610 Msa0058300:CDS
AAAGGTGCAGTACCGGCACA+CGG 0.659564 1_2:+14628966 Msa0058300:CDS
AGCAGCATACCAGACTGCGT+CGG 0.659641 1_2:-14631866 None:intergenic
GTGCACAGAAAACTCTATGG+AGG 0.659798 1_2:+14633194 Msa0058300:CDS
TGCATTGATATCGAAGTAGG+TGG 0.661775 1_2:+14628940 Msa0058300:CDS
ATCTCAACAACAATCGACAC+AGG 0.661847 1_2:-14633034 None:intergenic
GCACATAAAAGTGATGATGT+TGG 0.662214 1_2:+14631745 Msa0058300:CDS
GGAGACTCATAACCATCAAG+AGG 0.664207 1_2:-14629033 None:intergenic
TGGCTTGAAAGATGACCTAG+TGG 0.665585 1_2:+14630354 Msa0058300:CDS
TTGAACAGCATGGGGCAGAG+TGG 0.669285 1_2:+14632014 Msa0058300:CDS
GACATGATAAAGTATCCACC+AGG 0.672318 1_2:-14630664 None:intergenic
CCTACTTCGATATCAATGCA+AGG 0.678756 1_2:-14628937 None:intergenic
GTCAAGCTAAAAGACCAACT+GGG 0.685042 1_2:+14628311 Msa0058300:CDS
GCATGGGGCAGAGTGGCCTG+AGG 0.694517 1_2:+14632021 Msa0058300:CDS
ACAAATAGAGGCTGTCAGTG+CGG 0.698581 1_2:-14631710 None:intergenic
CAATAAGGAGAAATTGATCG+CGG 0.710195 1_2:+14632084 Msa0058300:CDS
ATGGTACCAGACATTGAGTG+GGG 0.716463 1_2:+14630241 Msa0058300:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTCATCATTTTTAAAT+AGG + chr1_2:14631948-14631967 Msa0058300:intron 10.0%
!!! TGAAAAGTATGTTATATTTA+AGG + chr1_2:14629089-14629108 Msa0058300:intron 15.0%
!!! GTAAATTTTCATTTATTAGT+CGG + chr1_2:14629666-14629685 Msa0058300:intron 15.0%
!! AACAGTTAATTAAATACATA+AGG + chr1_2:14631018-14631037 Msa0058300:intron 15.0%
!!! TTGATTTGTGATTATTTAAA+AGG - chr1_2:14631180-14631199 None:intergenic 15.0%
!! AATAATCACAAATCAAATAA+TGG + chr1_2:14631184-14631203 Msa0058300:intron 15.0%
!! ATAACGAATTTATTATTTCA+AGG - chr1_2:14631270-14631289 None:intergenic 15.0%
!! TAAGGTTGTTTATTAATAAT+AGG + chr1_2:14631923-14631942 Msa0058300:intron 15.0%
!!! AGTTATTTCTATAGTTAAAA+TGG + chr1_2:14632756-14632775 Msa0058300:intron 15.0%
!!! GTTATTTCTATAGTTAAAAT+GGG + chr1_2:14632757-14632776 Msa0058300:intron 15.0%
!! ATTTATTGTTAAAAGCAATT+TGG - chr1_2:14632998-14633017 None:intergenic 15.0%
!! AAAAAATGGTATATATTAGA+GGG - chr1_2:14633227-14633246 None:intergenic 15.0%
!! AAAAAAATGGTATATATTAG+AGG - chr1_2:14633228-14633247 None:intergenic 15.0%
!!! TCTAATATATACCATTTTTT+TGG + chr1_2:14633227-14633246 Msa0058300:three_prime_UTR 15.0%
!! AGAAAGATCATAAATTTCAT+AGG + chr1_2:14628530-14628549 Msa0058300:CDS 20.0%
!! TTAACATTTGATTCAAACAA+AGG - chr1_2:14628871-14628890 None:intergenic 20.0%
!! AATCAAATGTTAACTATAGA+TGG + chr1_2:14628878-14628897 Msa0058300:CDS 20.0%
!! CATATATTAAAAAACATCGT+TGG + chr1_2:14629840-14629859 Msa0058300:CDS 20.0%
!! ATACAATGATTATGTTTAAG+AGG - chr1_2:14629993-14630012 None:intergenic 20.0%
!! GATAGAACATTAGTTAATAA+TGG + chr1_2:14630020-14630039 Msa0058300:intron 20.0%
!!! AAAGAAATAAGACTATGTTT+TGG - chr1_2:14630059-14630078 None:intergenic 20.0%
!!! AAAACATAGTCTTATTTCTT+TGG + chr1_2:14630058-14630077 Msa0058300:intron 20.0%
!! AAAATACCAAAATTATAGAC+TGG - chr1_2:14630524-14630543 None:intergenic 20.0%
!!! ATCCTTTCATTTTTTTTTCA+GGG + chr1_2:14630605-14630624 Msa0058300:intron 20.0%
!!! ATAAAACAAGAGTATTAACT+GGG + chr1_2:14630956-14630975 Msa0058300:intron 20.0%
!! CTCACTTATAAAATCAATTT+CGG + chr1_2:14631353-14631372 Msa0058300:intron 20.0%
!!! TTTTCATTTTCTTTGCAAAT+TGG - chr1_2:14631844-14631863 None:intergenic 20.0%
!!! TTTTTCCTTATATTTAAGTC+CGG - chr1_2:14632289-14632308 None:intergenic 20.0%
!! TGTAATGATGTACTAAATAT+AGG - chr1_2:14632361-14632380 None:intergenic 20.0%
!! TTATTTCCATAAGTTACAAT+AGG + chr1_2:14632814-14632833 Msa0058300:intron 20.0%
!! TAATCAACTTAATGTGTAAA+AGG + chr1_2:14633345-14633364 Msa0058300:three_prime_UTR 20.0%
!!! TTTTTGCTGTAAAAATTACT+TGG + chr1_2:14633436-14633455 Msa0058300:three_prime_UTR 20.0%
!!! GTCTCTGTTTTATTTTTGTT+TGG + chr1_2:14628368-14628387 Msa0058300:CDS 25.0%
!!! TTCTTCTGTTAGTTTTCAAA+GGG + chr1_2:14628411-14628430 Msa0058300:CDS 25.0%
!! ATGAGAAAAAGATTGATGAT+GGG + chr1_2:14628557-14628576 Msa0058300:CDS 25.0%
! AATAAAGAGAATGTGAATCA+AGG + chr1_2:14628661-14628680 Msa0058300:CDS 25.0%
! ATAAAGAGAATGTGAATCAA+GGG + chr1_2:14628662-14628681 Msa0058300:CDS 25.0%
! AGAGTTAAAGAAAACAAAGA+AGG + chr1_2:14628831-14628850 Msa0058300:CDS 25.0%
! GAGTTAAAGAAAACAAAGAA+GGG + chr1_2:14628832-14628851 Msa0058300:CDS 25.0%
!!! TGTATTAGCTTTTAGATTGT+TGG + chr1_2:14629119-14629138 Msa0058300:intron 25.0%
! ATCCATATAAGCTTATAGTA+TGG + chr1_2:14629177-14629196 Msa0058300:intron 25.0%
! CTTATAGTATGGAGAATTTA+GGG + chr1_2:14629188-14629207 Msa0058300:intron 25.0%
! AAGCTTATTTGAGAGTTTAT+GGG - chr1_2:14629327-14629346 None:intergenic 25.0%
! TAAGCTTATTTGAGAGTTTA+TGG - chr1_2:14629328-14629347 None:intergenic 25.0%
! CGTAAGCAATTATATGATAA+TGG - chr1_2:14629406-14629425 None:intergenic 25.0%
! TTTCATTTATTAGTCGGATA+AGG + chr1_2:14629672-14629691 Msa0058300:intron 25.0%
!! TTAATATATGCAGCTAGTTT+CGG - chr1_2:14629830-14629849 None:intergenic 25.0%
! TATTAAAAAACATCGTTGGT+TGG + chr1_2:14629844-14629863 Msa0058300:CDS 25.0%
!! TGTATTCCAGTCTATAATTT+TGG + chr1_2:14630515-14630534 Msa0058300:intron 25.0%
! CTGAAAAAAAAATGAAAGGA+TGG - chr1_2:14630606-14630625 None:intergenic 25.0%
!!! CATCCTTTCATTTTTTTTTC+AGG + chr1_2:14630604-14630623 Msa0058300:intron 25.0%
!!! TCCTTTCATTTTTTTTTCAG+GGG + chr1_2:14630606-14630625 Msa0058300:intron 25.0%
!!! GATAAAACAAGAGTATTAAC+TGG + chr1_2:14630955-14630974 Msa0058300:intron 25.0%
!! GTAATTCAGTTTTCAATTAC+AGG - chr1_2:14631069-14631088 None:intergenic 25.0%
! GTCAATGATAGAATTATGTA+AGG - chr1_2:14631144-14631163 None:intergenic 25.0%
!! TGTATTGCATTTTGTATTCT+AGG - chr1_2:14631216-14631235 None:intergenic 25.0%
! TCTGAAAATGAGTTTATAAG+CGG - chr1_2:14631541-14631560 None:intergenic 25.0%
! TCTATCTAAACATAACGTTT+GGG + chr1_2:14632489-14632508 Msa0058300:CDS 25.0%
! AAAGATAAGTACAACAATAC+TGG - chr1_2:14632692-14632711 None:intergenic 25.0%
! AAACTTCCTATTGTAACTTA+TGG - chr1_2:14632823-14632842 None:intergenic 25.0%
!! GCTTTTAACAATAAATTTGC+AGG + chr1_2:14633002-14633021 Msa0058300:intron 25.0%
!! AAATATTGAGAAGTATGCAA+TGG + chr1_2:14633128-14633147 Msa0058300:CDS 25.0%
!! AATATTGAGAAGTATGCAAT+GGG + chr1_2:14633129-14633148 Msa0058300:CDS 25.0%
! TGTTTGAAGAAATAGAACAT+TGG + chr1_2:14633469-14633488 Msa0058300:three_prime_UTR 25.0%
! ATGACAGCTGTAACAATTTT+GGG + chr1_2:14628346-14628365 Msa0058300:CDS 30.0%
!!! CTTCTTCTGTTAGTTTTCAA+AGG + chr1_2:14628410-14628429 Msa0058300:CDS 30.0%
!!! TGGTGTTGGTTTTTTAACAT+TGG - chr1_2:14628485-14628504 None:intergenic 30.0%
GATGAGAAAAAGATTGATGA+TGG + chr1_2:14628556-14628575 Msa0058300:CDS 30.0%
!!! ATTAGCTTTTAGATTGTTGG+AGG + chr1_2:14629122-14629141 Msa0058300:intron 30.0%
CTCCATACTATAAGCTTATA+TGG - chr1_2:14629182-14629201 None:intergenic 30.0%
GCTTATAGTATGGAGAATTT+AGG + chr1_2:14629187-14629206 Msa0058300:intron 30.0%
! ATTAAGTTGTTTAGCCTACT+AGG + chr1_2:14629439-14629458 Msa0058300:intron 30.0%
! TTAAGTTGTTTAGCCTACTA+GGG + chr1_2:14629440-14629459 Msa0058300:intron 30.0%
AATCCTAGTAGAAGCTTATA+GGG - chr1_2:14629532-14629551 None:intergenic 30.0%
AAATCCTAGTAGAAGCTTAT+AGG - chr1_2:14629533-14629552 None:intergenic 30.0%
AAACATGTAGATATTGCAAG+AGG + chr1_2:14629623-14629642 Msa0058300:intron 30.0%
TGTTATCTCACAGTAACATT+TGG + chr1_2:14629769-14629788 Msa0058300:intron 30.0%
! TAATATATGCAGCTAGTTTC+GGG - chr1_2:14629829-14629848 None:intergenic 30.0%
!!! AAAATTCTGACTGGTTTTGA+GGG - chr1_2:14629895-14629914 None:intergenic 30.0%
!!! AAAAATTCTGACTGGTTTTG+AGG - chr1_2:14629896-14629915 None:intergenic 30.0%
! TCAAAACCAGTCAGAATTTT+TGG + chr1_2:14629895-14629914 Msa0058300:CDS 30.0%
! CAAAACCAGTCAGAATTTTT+GGG + chr1_2:14629896-14629915 Msa0058300:CDS 30.0%
CTTGTCCTGAAAATTATAGA+TGG + chr1_2:14630222-14630241 Msa0058300:intron 30.0%
! TGGTACCATCTATAATTTTC+AGG - chr1_2:14630230-14630249 None:intergenic 30.0%
TAAAAATATTCGTGTTGTCC+TGG + chr1_2:14630264-14630283 Msa0058300:CDS 30.0%
!! TCAAAAACTTGACTTGGAAA+AGG - chr1_2:14630448-14630467 None:intergenic 30.0%
ATAGCATCAAAAACTTGACT+TGG - chr1_2:14630454-14630473 None:intergenic 30.0%
!!! CCTTTCATTTTTTTTTCAGG+GGG + chr1_2:14630607-14630626 Msa0058300:intron 30.0%
TGCACTCATTGATGAAATAA+AGG + chr1_2:14630745-14630764 Msa0058300:intron 30.0%
TGTTTCTTGTGATTCATTCT+CGG + chr1_2:14630773-14630792 Msa0058300:intron 30.0%
CAAAAACACGATATTTAACC+AGG + chr1_2:14630877-14630896 Msa0058300:intron 30.0%
ATTTAACCAGGTGTATGTAA+AGG + chr1_2:14630889-14630908 Msa0058300:intron 30.0%
TTTAACCAGGTGTATGTAAA+GGG + chr1_2:14630890-14630909 Msa0058300:intron 30.0%
AGGTTCATTTGTTTGATTCT+AGG - chr1_2:14631250-14631269 None:intergenic 30.0%
GTCTCACATTAGATGAAATA+TGG - chr1_2:14631380-14631399 None:intergenic 30.0%
CTGAAAATGAGTTTATAAGC+GGG - chr1_2:14631540-14631559 None:intergenic 30.0%
TTGTAGTGTGAGTTTATAAG+TGG + chr1_2:14631631-14631650 Msa0058300:intron 30.0%
ATGACATATACGAATTGAGA+AGG + chr1_2:14631806-14631825 Msa0058300:CDS 30.0%
! CATTTTCTTTGCAAATTGGT+GGG - chr1_2:14631840-14631859 None:intergenic 30.0%
! TCATTTTCTTTGCAAATTGG+TGG - chr1_2:14631841-14631860 None:intergenic 30.0%
!! ACTTGTTTCTAATCAGCTTA+AGG + chr1_2:14631905-14631924 Msa0058300:intron 30.0%
!! GAGATATGACTTGTTAACTA+TGG - chr1_2:14632128-14632147 None:intergenic 30.0%
GTTAACAAGTCATATCTCAA+TGG + chr1_2:14632130-14632149 Msa0058300:CDS 30.0%
AAGTCATATCTCAATGGAAT+GGG + chr1_2:14632136-14632155 Msa0058300:CDS 30.0%
GACAAATATCAGGAATGTAA+TGG + chr1_2:14632168-14632187 Msa0058300:CDS 30.0%
!! TTAAAATCAAGTGGTTTTGC+TGG - chr1_2:14632221-14632240 None:intergenic 30.0%
! ATTTTCCTTTGATACCATTC+CGG + chr1_2:14632267-14632286 Msa0058300:intron 30.0%
! ACATGTATTTGGTTCACATT+TGG - chr1_2:14632329-14632348 None:intergenic 30.0%
! GGCAAAAAAGTACATGTATT+TGG - chr1_2:14632340-14632359 None:intergenic 30.0%
AGATGTTGGAAATCATTCAA+TGG - chr1_2:14632409-14632428 None:intergenic 30.0%
! TCATGTTTCTAACAAGATGT+TGG - chr1_2:14632423-14632442 None:intergenic 30.0%
! CAGCTAATCTGTATTTTCAT+AGG - chr1_2:14632465-14632484 None:intergenic 30.0%
CTCTATCTAAACATAACGTT+TGG + chr1_2:14632488-14632507 Msa0058300:CDS 30.0%
AATCCCCGTTCAAAAATTAT+GGG - chr1_2:14632553-14632572 None:intergenic 30.0%
AAATCCCCGTTCAAAAATTA+TGG - chr1_2:14632554-14632573 None:intergenic 30.0%
! ATTTTTGAACGGGGATTTTT+TGG + chr1_2:14632556-14632575 Msa0058300:CDS 30.0%
AAACGCTAGTATAATGGTTA+TGG - chr1_2:14632729-14632748 None:intergenic 30.0%
AGTTGAAATCCTAAATGCAT+TGG + chr1_2:14633102-14633121 Msa0058300:CDS 30.0%
ATATTTCCTCCAATGCATTT+AGG - chr1_2:14633114-14633133 None:intergenic 30.0%
GTGATGATACACCAAAAAAA+TGG - chr1_2:14633241-14633260 None:intergenic 30.0%
AATTTGAATCAAGTCATGGT+GGG - chr1_2:14633278-14633297 None:intergenic 30.0%
ATGGAATTTGAATCAAGTCA+TGG - chr1_2:14633282-14633301 None:intergenic 30.0%
AGAGAGATAACAATTCAATG+TGG + chr1_2:14633500-14633519 Msa0058300:three_prime_UTR 30.0%
GAGAGATAACAATTCAATGT+GGG + chr1_2:14633501-14633520 Msa0058300:three_prime_UTR 30.0%
TAAAAGACCAACTGGGTTAT+GGG + chr1_2:14628318-14628337 Msa0058300:CDS 35.0%
! GATGACAGCTGTAACAATTT+TGG + chr1_2:14628345-14628364 Msa0058300:CDS 35.0%
GAAGAAGAAGAAGAAGAAAC+AGG - chr1_2:14628460-14628479 None:intergenic 35.0%
!! CGTTTTTCTGATTTTGGTGT+TGG - chr1_2:14628499-14628518 None:intergenic 35.0%
ACCAAAATCAGAAAAACGTG+TGG + chr1_2:14628501-14628520 Msa0058300:CDS 35.0%
! TCCACACGTTTTTCTGATTT+TGG - chr1_2:14628505-14628524 None:intergenic 35.0%
AAAGAAACGTGTGCATAAGA+AGG + chr1_2:14628633-14628652 Msa0058300:CDS 35.0%
GAGTTGGAAGATAAAGAAGA+AGG + chr1_2:14628715-14628734 Msa0058300:CDS 35.0%
GGAAGATAAAGAAGAAGGAT+TGG + chr1_2:14628720-14628739 Msa0058300:CDS 35.0%
! TCATGAGAGTGAAGTTGATT+TGG + chr1_2:14628744-14628763 Msa0058300:CDS 35.0%
GATTTGGATTCTGATGTTGT+TGG + chr1_2:14628760-14628779 Msa0058300:CDS 35.0%
TATCTCAGAATCTTCATCGA+CGG - chr1_2:14628806-14628825 None:intergenic 35.0%
!! CGATGAAGATTCTGAGATAT+TGG + chr1_2:14628807-14628826 Msa0058300:CDS 35.0%
ACAAAGAAGGGAAAAGTGAA+AGG + chr1_2:14628844-14628863 Msa0058300:CDS 35.0%
! TATACCTTCAATTTGCTCTC+AGG - chr1_2:14629069-14629088 None:intergenic 35.0%
AATCCCTATAAGCTTCTACT+AGG + chr1_2:14629526-14629545 Msa0058300:intron 35.0%
TTTATTAGTCGGATAAGGCT+CGG + chr1_2:14629677-14629696 Msa0058300:intron 35.0%
! TAAAAAACATCGTTGGTTGG+TGG + chr1_2:14629847-14629866 Msa0058300:CDS 35.0%
TTAGAATGATGCTTGTTCGT+TGG + chr1_2:14629965-14629984 Msa0058300:intron 35.0%
GAGATGAAAATGTATCTCTG+TGG + chr1_2:14630088-14630107 Msa0058300:intron 35.0%
TTTCAGGACAAGTTTCAAGA+TGG - chr1_2:14630214-14630233 None:intergenic 35.0%
!!! GGTGTTTTAACATTGTCACT+TGG + chr1_2:14630334-14630353 Msa0058300:CDS 35.0%
TAGACTGGAATACAAACCAT+TGG - chr1_2:14630509-14630528 None:intergenic 35.0%
CCCCCTGAAAAAAAAATGAA+AGG - chr1_2:14630610-14630629 None:intergenic 35.0%
AACTTCTACTGGAGATGAAT+CGG + chr1_2:14630632-14630651 Msa0058300:CDS 35.0%
! GATAGCATTGAAGAAGAAGA+AGG + chr1_2:14630697-14630716 Msa0058300:CDS 35.0%
TAACCATGCTTAGAATCAGA+GGG - chr1_2:14630805-14630824 None:intergenic 35.0%
ATAACCATGCTTAGAATCAG+AGG - chr1_2:14630806-14630825 None:intergenic 35.0%
GATTCTAAGCATGGTTATCA+TGG + chr1_2:14630808-14630827 Msa0058300:intron 35.0%
!! TCATACAAGTCGGTTTTGTA+GGG - chr1_2:14631322-14631341 None:intergenic 35.0%
!! ATCATACAAGTCGGTTTTGT+AGG - chr1_2:14631323-14631342 None:intergenic 35.0%
AAAACCTAAGCTGGTACATT+AGG - chr1_2:14631466-14631485 None:intergenic 35.0%
! TACCAGCTTAGGTTTTTATG+TGG + chr1_2:14631470-14631489 Msa0058300:intron 35.0%
! ACCAGCTTAGGTTTTTATGT+GGG + chr1_2:14631471-14631490 Msa0058300:intron 35.0%
GCTAATCCTGCTTACAAAAT+CGG + chr1_2:14631493-14631512 Msa0058300:intron 35.0%
AAAATGAGTTTATAAGCGGG+AGG - chr1_2:14631537-14631556 None:intergenic 35.0%
CAGAACATTCCAACAAATAG+AGG - chr1_2:14631725-14631744 None:intergenic 35.0%
! CTCTATTTGTTGGAATGTTC+TGG + chr1_2:14631723-14631742 Msa0058300:CDS 35.0%
! GCACATAAAAGTGATGATGT+TGG + chr1_2:14631745-14631764 Msa0058300:CDS 35.0%
! TCGTATATGTCATTTCCTTC+AGG - chr1_2:14631799-14631818 None:intergenic 35.0%
CTGTTCAATTCCAATTGGAA+TGG - chr1_2:14632002-14632021 None:intergenic 35.0%
CAATTGGAATTGAACAGCAT+GGG + chr1_2:14632005-14632024 Msa0058300:CDS 35.0%
AATTGGAATTGAACAGCATG+GGG + chr1_2:14632006-14632025 Msa0058300:CDS 35.0%
CAATAAGGAGAAATTGATCG+CGG + chr1_2:14632084-14632103 Msa0058300:CDS 35.0%
CAAGTCATATCTCAATGGAA+TGG + chr1_2:14632135-14632154 Msa0058300:CDS 35.0%
GCATTAACTGGACAAATATC+AGG + chr1_2:14632158-14632177 Msa0058300:CDS 35.0%
ATGGACATGAAATCCATCTA+TGG + chr1_2:14632187-14632206 Msa0058300:CDS 35.0%
ACATGAAATCCATCTATGGA+GGG + chr1_2:14632191-14632210 Msa0058300:CDS 35.0%
GCAACGAACTTAAAATCAAG+TGG - chr1_2:14632230-14632249 None:intergenic 35.0%
CCTTATATTTAAGTCCGGAA+TGG - chr1_2:14632284-14632303 None:intergenic 35.0%
CCATTCCGGACTTAAATATA+AGG + chr1_2:14632281-14632300 Msa0058300:intron 35.0%
GGAAAAACCATACATGTATC+TGG + chr1_2:14632302-14632321 Msa0058300:intron 35.0%
ATTTGGACCAGATACATGTA+TGG - chr1_2:14632312-14632331 None:intergenic 35.0%
! AAAATTATGGGAAGCGTATC+CGG - chr1_2:14632541-14632560 None:intergenic 35.0%
! CGCTTCCCATAATTTTTGAA+CGG + chr1_2:14632545-14632564 Msa0058300:CDS 35.0%
! GCTTCCCATAATTTTTGAAC+GGG + chr1_2:14632546-14632565 Msa0058300:CDS 35.0%
! CTTCCCATAATTTTTGAACG+GGG + chr1_2:14632547-14632566 Msa0058300:CDS 35.0%
ATACGCAAACGCTAGTATAA+TGG - chr1_2:14632735-14632754 None:intergenic 35.0%
AGCTGAAAAAACTTATGCAC+AGG + chr1_2:14632852-14632871 Msa0058300:intron 35.0%
GTTAAAAGCAATTTGGTCAC+AGG - chr1_2:14632991-14633010 None:intergenic 35.0%
TGAAATCCTAAATGCATTGG+AGG + chr1_2:14633105-14633124 Msa0058300:CDS 35.0%
AATCAGAATGACTTTCTACC+AGG + chr1_2:14633153-14633172 Msa0058300:CDS 35.0%
ACTTTCTACCAGGAAAAAGA+GGG + chr1_2:14633163-14633182 Msa0058300:CDS 35.0%
! ATAAGATACCCTCTTTTTCC+TGG - chr1_2:14633174-14633193 None:intergenic 35.0%
TATGTGCACAGAAAACTCTA+TGG + chr1_2:14633191-14633210 Msa0058300:CDS 35.0%
GGTATATATTAGAGGGTTCA+AGG - chr1_2:14633220-14633239 None:intergenic 35.0%
GAATTTGAATCAAGTCATGG+TGG - chr1_2:14633279-14633298 None:intergenic 35.0%
GTCAAGCTAAAAGACCAACT+GGG + chr1_2:14628311-14628330 Msa0058300:CDS 40.0%
CTAAAAGACCAACTGGGTTA+TGG + chr1_2:14628317-14628336 Msa0058300:CDS 40.0%
ATCAGAAAAACGTGTGGAAG+TGG + chr1_2:14628507-14628526 Msa0058300:CDS 40.0%
GAATGTGAATCAAGGGTCAT+TGG + chr1_2:14628669-14628688 Msa0058300:CDS 40.0%
TCATTGGAGAAAGAGGAAGA+AGG + chr1_2:14628685-14628704 Msa0058300:CDS 40.0%
GGAAGAAGGTGAAAAAGAGT+TGG + chr1_2:14628699-14628718 Msa0058300:CDS 40.0%
TTGGATTCTGATGTTGTTGG+TGG + chr1_2:14628763-14628782 Msa0058300:CDS 40.0%
CCTACTTCGATATCAATGCA+AGG - chr1_2:14628940-14628959 None:intergenic 40.0%
! CCTTGCATTGATATCGAAGT+AGG + chr1_2:14628937-14628956 Msa0058300:CDS 40.0%
! TGCATTGATATCGAAGTAGG+TGG + chr1_2:14628940-14628959 Msa0058300:CDS 40.0%
ATTGATATCGAAGTAGGTGG+TGG + chr1_2:14628943-14628962 Msa0058300:CDS 40.0%
AGAGGAACCATACACATGAA+GGG - chr1_2:14629012-14629031 None:intergenic 40.0%
AAGAGGAACCATACACATGA+AGG - chr1_2:14629013-14629032 None:intergenic 40.0%
TCATAACCATCAAGAGGAAG+AGG - chr1_2:14629030-14629049 None:intergenic 40.0%
! TCTTGATGGTTATGAGTCTC+CGG + chr1_2:14629035-14629054 Msa0058300:CDS 40.0%
!! TCTAGTCTAGCCTTAAGTGT+TGG + chr1_2:14629728-14629747 Msa0058300:intron 40.0%
!! TCTAGCCTTAAGTGTTGGAT+TGG + chr1_2:14629733-14629752 Msa0058300:intron 40.0%
CCAAACCAATCCAACACTTA+AGG - chr1_2:14629741-14629760 None:intergenic 40.0%
!! CCTTAAGTGTTGGATTGGTT+TGG + chr1_2:14629738-14629757 Msa0058300:intron 40.0%
!! AACCAGTCAGAATTTTTGGG+AGG + chr1_2:14629899-14629918 Msa0058300:CDS 40.0%
!! ACCAGTCAGAATTTTTGGGA+GGG + chr1_2:14629900-14629919 Msa0058300:CDS 40.0%
CTATCTTGAGTCGATTGAAG+AGG + chr1_2:14629931-14629950 Msa0058300:CDS 40.0%
! TTTTTACCCCACTCAATGTC+TGG - chr1_2:14630250-14630269 None:intergenic 40.0%
AATCTGTACATCCAATGTCC+AGG - chr1_2:14630285-14630304 None:intergenic 40.0%
CAAAAGGGCTAACCAATGTT+GGG - chr1_2:14630411-14630430 None:intergenic 40.0%
GAAGTCTCCTTCTAGCAAAA+GGG - chr1_2:14630426-14630445 None:intergenic 40.0%
TACAAACCATTGGAATGCCA+AGG - chr1_2:14630499-14630518 None:intergenic 40.0%
!! ATGAATCGGATTCTAAGACC+TGG + chr1_2:14630646-14630665 Msa0058300:CDS 40.0%
! GACATGATAAAGTATCCACC+AGG - chr1_2:14630667-14630686 None:intergenic 40.0%
AACCATGCTTAGAATCAGAG+GGG - chr1_2:14630804-14630823 None:intergenic 40.0%
! TGACTGTTTGACTTCACACT+TGG - chr1_2:14630990-14631009 None:intergenic 40.0%
!! CAAAACCGACTTGTATGATG+AGG + chr1_2:14631324-14631343 Msa0058300:intron 40.0%
GACATCCTCATCATACAAGT+CGG - chr1_2:14631332-14631351 None:intergenic 40.0%
AGTCATGCGTAACCATTCAT+GGG - chr1_2:14631421-14631440 None:intergenic 40.0%
AAGTCATGCGTAACCATTCA+TGG - chr1_2:14631422-14631441 None:intergenic 40.0%
AATGGTTACGCATGACTTGA+GGG + chr1_2:14631424-14631443 Msa0058300:intron 40.0%
!! TACAAGCCGATTTTGTAAGC+AGG - chr1_2:14631502-14631521 None:intergenic 40.0%
!! TGCTTACAAAATCGGCTTGT+AGG + chr1_2:14631501-14631520 Msa0058300:intron 40.0%
!! GCTTACAAAATCGGCTTGTA+GGG + chr1_2:14631502-14631521 Msa0058300:intron 40.0%
TGACCTGAGTAACCTTGAAA+CGG + chr1_2:14631594-14631613 Msa0058300:intron 40.0%
GTTGTTAGTCATCCGTTTCA+AGG - chr1_2:14631609-14631628 None:intergenic 40.0%
! AGTGATGATGTTGGTGAAGT+TGG + chr1_2:14631754-14631773 Msa0058300:CDS 40.0%
TGCTGCTGAAACATTAGTTG+AGG + chr1_2:14631882-14631901 Msa0058300:intron 40.0%
GTGTGCAAACAAGTCTTGAT+TGG - chr1_2:14631980-14631999 None:intergenic 40.0%
TGTTTGCACACCATTCCAAT+TGG + chr1_2:14631989-14632008 Msa0058300:CDS 40.0%
CCATGCTGTTCAATTCCAAT+TGG - chr1_2:14632007-14632026 None:intergenic 40.0%
CCAATTGGAATTGAACAGCA+TGG + chr1_2:14632004-14632023 Msa0058300:CDS 40.0%
TCCTGACTGGATGAACAATA+AGG + chr1_2:14632069-14632088 Msa0058300:CDS 40.0%
TCCTTATTGTTCATCCAGTC+AGG - chr1_2:14632073-14632092 None:intergenic 40.0%
TGTTAACTATGGCGTTCCAA+TGG - chr1_2:14632117-14632136 None:intergenic 40.0%
TCAATGGAATGGGCATTAAC+TGG + chr1_2:14632146-14632165 Msa0058300:CDS 40.0%
GACATGAAATCCATCTATGG+AGG + chr1_2:14632190-14632209 Msa0058300:CDS 40.0%
TAAGTCCGGAATGGTATCAA+AGG - chr1_2:14632275-14632294 None:intergenic 40.0%
!! TTTTTGGCGTCTATCACGAT+TGG + chr1_2:14632572-14632591 Msa0058300:CDS 40.0%
TGCAGAAGGTCATAAGTTCT+TGG - chr1_2:14632619-14632638 None:intergenic 40.0%
ACAAATGATCAGCATGCAGA+AGG - chr1_2:14632633-14632652 None:intergenic 40.0%
ATCTCAACAACAATCGACAC+AGG - chr1_2:14633037-14633056 None:intergenic 40.0%
!! TGTGTCGATTGTTGTTGAGA+TGG + chr1_2:14633036-14633055 Msa0058300:CDS 40.0%
TTGAGATGGACCGTATCTTA+CGG + chr1_2:14633050-14633069 Msa0058300:CDS 40.0%
GACTTTCTACCAGGAAAAAG+AGG + chr1_2:14633162-14633181 Msa0058300:CDS 40.0%
AGTCGAGGGAAAGAATATCA+TGG - chr1_2:14633301-14633320 None:intergenic 40.0%
TTGATTCACGTGTAAGTCGA+GGG - chr1_2:14633315-14633334 None:intergenic 40.0%
! ATTGATTCACGTGTAAGTCG+AGG - chr1_2:14633316-14633335 None:intergenic 40.0%
!!! GTTGGTCTTTTAGCTTGACG+AGG - chr1_2:14628310-14628329 None:intergenic 45.0%
CGTCAAGCTAAAAGACCAAC+TGG + chr1_2:14628310-14628329 Msa0058300:CDS 45.0%
ATCTTCACCCATAACCCAGT+TGG - chr1_2:14628328-14628347 None:intergenic 45.0%
GCGCCACTTCTTTCTTATGA+GGG - chr1_2:14628609-14628628 None:intergenic 45.0%
GAAACGTGTGCATAAGAAGG+AGG + chr1_2:14628636-14628655 Msa0058300:CDS 45.0%
TCAAGGGTCATTGGAGAAAG+AGG + chr1_2:14628678-14628697 Msa0058300:CDS 45.0%
!! TATCGAAGTAGGTGGTGGAA+AGG + chr1_2:14628948-14628967 Msa0058300:CDS 45.0%
!! ATACACATGAAGGGCATCCT+TGG - chr1_2:14629003-14629022 None:intergenic 45.0%
AAGGATGCCCTTCATGTGTA+TGG + chr1_2:14629002-14629021 Msa0058300:CDS 45.0%
ATGGTTCCTCTTCCTCTTGA+TGG + chr1_2:14629021-14629040 Msa0058300:CDS 45.0%
GGAGACTCATAACCATCAAG+AGG - chr1_2:14629036-14629055 None:intergenic 45.0%
! TTCAATTTGCTCTCAGGCCA+CGG - chr1_2:14629063-14629082 None:intergenic 45.0%
AGACTGTTTGCGAGAGCTAA+TGG + chr1_2:14629261-14629280 Msa0058300:intron 45.0%
TTGTTTAGCCTACTAGGGTC+TGG + chr1_2:14629445-14629464 Msa0058300:intron 45.0%
AATCCAAACCAGACCCTAGT+AGG - chr1_2:14629456-14629475 None:intergenic 45.0%
TCCCTCCCAAAAATTCTGAC+TGG - chr1_2:14629904-14629923 None:intergenic 45.0%
TCTGTGGCACTGTGATTTCT+AGG + chr1_2:14630104-14630123 Msa0058300:intron 45.0%
CAGGACAAGTTTCAAGATGG+TGG - chr1_2:14630211-14630230 None:intergenic 45.0%
AGATGGTACCAGACATTGAG+TGG + chr1_2:14630239-14630258 Msa0058300:intron 45.0%
GATGGTACCAGACATTGAGT+GGG + chr1_2:14630240-14630259 Msa0058300:intron 45.0%
ATGGTACCAGACATTGAGTG+GGG + chr1_2:14630241-14630260 Msa0058300:CDS 45.0%
ATTCGTGTTGTCCTGGACAT+TGG + chr1_2:14630271-14630290 Msa0058300:CDS 45.0%
TGGCTTGAAAGATGACCTAG+TGG + chr1_2:14630354-14630373 Msa0058300:CDS 45.0%
GCAAAAGGGCTAACCAATGT+TGG - chr1_2:14630412-14630431 None:intergenic 45.0%
!! TGGTTAGCCCTTTTGCTAGA+AGG + chr1_2:14630416-14630435 Msa0058300:CDS 45.0%
GGAAGTCTCCTTCTAGCAAA+AGG - chr1_2:14630427-14630446 None:intergenic 45.0%
AGCATACCTTGGCATTCCAA+TGG + chr1_2:14630490-14630509 Msa0058300:CDS 45.0%
TTCAGGGGGTAAACTTCTAC+TGG + chr1_2:14630621-14630640 Msa0058300:intron 45.0%
!! AATCGGATTCTAAGACCTGG+TGG + chr1_2:14630649-14630668 Msa0058300:CDS 45.0%
TTCCCCTCTGATTCTAAGCA+TGG + chr1_2:14630799-14630818 Msa0058300:intron 45.0%
AACCAGGTGTATGTAAAGGG+TGG + chr1_2:14630893-14630912 Msa0058300:intron 45.0%
TACCACCCTTTACATACACC+TGG - chr1_2:14630898-14630917 None:intergenic 45.0%
ATAAGGACAAGAGAAACGCG+TGG + chr1_2:14631035-14631054 Msa0058300:intron 45.0%
!! CGGTTTTGTAGGGTTGAGTT+AGG - chr1_2:14631312-14631331 None:intergenic 45.0%
GTCATGCGTAACCATTCATG+GGG - chr1_2:14631420-14631439 None:intergenic 45.0%
GAATGGTTACGCATGACTTG+AGG + chr1_2:14631423-14631442 Msa0058300:intron 45.0%
ATGGTTACGCATGACTTGAG+GGG + chr1_2:14631425-14631444 Msa0058300:intron 45.0%
TGACTTGAGGGGCTTGATAA+TGG + chr1_2:14631436-14631455 Msa0058300:intron 45.0%
! GACTTGAGGGGCTTGATAAT+GGG + chr1_2:14631437-14631456 Msa0058300:intron 45.0%
GCCCACATAAAAACCTAAGC+TGG - chr1_2:14631475-14631494 None:intergenic 45.0%
GTTCAGTCTTAGGCGAGATA+AGG - chr1_2:14631564-14631583 None:intergenic 45.0%
CGCTTCAGATGTTCAGTCTT+AGG - chr1_2:14631574-14631593 None:intergenic 45.0%
CATCCGTTTCAAGGTTACTC+AGG - chr1_2:14631600-14631619 None:intergenic 45.0%
ACAAATAGAGGCTGTCAGTG+CGG - chr1_2:14631713-14631732 None:intergenic 45.0%
CACTGACAGCCTCTATTTGT+TGG + chr1_2:14631713-14631732 Msa0058300:CDS 45.0%
GGAAAAGTTTCGAGCCTCTT+CGG - chr1_2:14632052-14632071 None:intergenic 45.0%
AACTATGGCGTTCCAATGGT+TGG - chr1_2:14632113-14632132 None:intergenic 45.0%
ACGCCTCAAAAGCAGGTATT+CGG + chr1_2:14632657-14632676 Msa0058300:intron 45.0%
!! TTCCCGAATACCTGCTTTTG+AGG - chr1_2:14632663-14632682 None:intergenic 45.0%
TATCTCGATCACTTACGCAG+AGG + chr1_2:14632904-14632923 Msa0058300:intron 45.0%
GTGCACAGAAAACTCTATGG+AGG + chr1_2:14633194-14633213 Msa0058300:CDS 45.0%
GCGCCCTCATAAGAAAGAAG+TGG + chr1_2:14628603-14628622 Msa0058300:CDS 50.0%
CGCGCCACTTCTTTCTTATG+AGG - chr1_2:14628610-14628629 None:intergenic 50.0%
CATAAGAAAGAAGTGGCGCG+TGG + chr1_2:14628610-14628629 Msa0058300:CDS 50.0%
GTGGCCTGAGAGCAAATTGA+AGG + chr1_2:14629062-14629081 Msa0058300:CDS 50.0%
TAGCCTACTAGGGTCTGGTT+TGG + chr1_2:14629450-14629469 Msa0058300:intron 50.0%
!! CATCGTTGGTTGGTGGATTC+TGG + chr1_2:14629854-14629873 Msa0058300:CDS 50.0%
GCAGCTGCTCTCTTCGATAA+GGG + chr1_2:14630313-14630332 Msa0058300:CDS 50.0%
CCACTTGAGCTAAGTCCACT+AGG - chr1_2:14630372-14630391 None:intergenic 50.0%
!! CCTAGTGGACTTAGCTCAAG+TGG + chr1_2:14630369-14630388 Msa0058300:CDS 50.0%
!! TTGAGGGGCTTGATAATGGG+TGG + chr1_2:14631440-14631459 Msa0058300:intron 50.0%
GTGGCCTAATGTACCAGCTT+AGG + chr1_2:14631459-14631478 Msa0058300:intron 50.0%
ATGAAAATCCCGACGCAGTC+TGG + chr1_2:14631857-14631876 Msa0058300:CDS 50.0%
! GGCTCGAAACTTTTCCTGAC+TGG + chr1_2:14632056-14632075 Msa0058300:CDS 50.0%
TGTAGTACCTGTCCATGCAC+CGG + chr1_2:14632519-14632538 Msa0058300:CDS 50.0%
! CACGATTGGTGCGAGTCTTT+TGG + chr1_2:14632586-14632605 Msa0058300:CDS 50.0%
TGTTCTCACGCCTCAAAAGC+AGG + chr1_2:14632650-14632669 Msa0058300:CDS 50.0%
CGCCTCAAAAGCAGGTATTC+GGG + chr1_2:14632658-14632677 Msa0058300:intron 50.0%
! ATCAAGTCATGGTGGGACTC+TGG - chr1_2:14633271-14633290 None:intergenic 50.0%
! GTGGTGGAAAGGTGCAGTAC+CGG + chr1_2:14628959-14628978 Msa0058300:CDS 55.0%
!! AAAGGTGCAGTACCGGCACA+CGG + chr1_2:14628966-14628985 Msa0058300:CDS 55.0%
ACACGGAGAGGAGTTGTCCA+AGG + chr1_2:14628983-14629002 Msa0058300:CDS 55.0%
CGCAGCTGCTCTCTTCGATA+AGG + chr1_2:14630312-14630331 Msa0058300:CDS 55.0%
GTGCACGTTGCAGCATACCT+TGG + chr1_2:14630479-14630498 Msa0058300:CDS 55.0%
! AACCATTCATGGGGCGTCAG+AGG - chr1_2:14631411-14631430 None:intergenic 55.0%
AGCAGCATACCAGACTGCGT+CGG - chr1_2:14631869-14631888 None:intergenic 55.0%
TTGAACAGCATGGGGCAGAG+TGG + chr1_2:14632014-14632033 Msa0058300:CDS 55.0%
TGATCGCGGACACCAACCAT+TGG + chr1_2:14632098-14632117 Msa0058300:CDS 55.0%
GCTGGCATACCCTCCATAGA+TGG - chr1_2:14632203-14632222 None:intergenic 55.0%
ATGGACCGTATCTTACGGCC+AGG + chr1_2:14633055-14633074 Msa0058300:CDS 55.0%
ACCGTATCTTACGGCCAGGA+GGG + chr1_2:14633059-14633078 Msa0058300:CDS 55.0%
ACCCTCCTGGCCGTAAGATA+CGG - chr1_2:14633063-14633082 None:intergenic 55.0%
CGTATGATCGTCAACCCTCC+TGG - chr1_2:14633076-14633095 None:intergenic 55.0%
GACAACTCCTCTCCGTGTGC+CGG - chr1_2:14628981-14629000 None:intergenic 60.0%
! GTTATGAGTCTCCGGTGCCG+TGG + chr1_2:14629043-14629062 Msa0058300:CDS 60.0%
CACCTCTGACGCCCCATGAA+TGG + chr1_2:14631406-14631425 Msa0058300:intron 60.0%
AGAGGCTGTCAGTGCGGTCA+TGG - chr1_2:14631707-14631726 None:intergenic 60.0%
GCAGCATACCAGACTGCGTC+GGG - chr1_2:14631868-14631887 None:intergenic 60.0%
AGCCTCTTCGGCCATTCCTC+AGG - chr1_2:14632040-14632059 None:intergenic 60.0%
AGCGTATCCGGTGCATGGAC+AGG - chr1_2:14632529-14632548 None:intergenic 60.0%
! TGGGAAGCGTATCCGGTGCA+TGG - chr1_2:14632534-14632553 None:intergenic 60.0%
GACCGTATCTTACGGCCAGG+AGG + chr1_2:14633058-14633077 Msa0058300:CDS 60.0%
!! TGCAGTACCGGCACACGGAG+AGG + chr1_2:14628971-14628990 Msa0058300:CDS 65.0%
TTGCTCTCAGGCCACGGCAC+CGG - chr1_2:14629057-14629076 None:intergenic 65.0%
GCTCAAGTGGCACTCGAGCG+CGG + chr1_2:14630382-14630401 Msa0058300:CDS 65.0%
CGAGCGCGGCTTCCCAACAT+TGG + chr1_2:14630396-14630415 Msa0058300:CDS 65.0%
GGGCAGAGTGGCCTGAGGAA+TGG + chr1_2:14632026-14632045 Msa0058300:CDS 65.0%
GGCCTGAGGAATGGCCGAAG+AGG + chr1_2:14632035-14632054 Msa0058300:CDS 65.0%
GCATGGGGCAGAGTGGCCTG+AGG + chr1_2:14632021-14632040 Msa0058300:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 14628295 14633568 14628295 ID=Msa0058300;Name=Msa0058300
chr1_2 mRNA 14628295 14633568 14628295 ID=Msa0058300-mRNA-1;Parent=Msa0058300;Name=Msa0058300-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|1|0.87|1|1|1|8|346|704
chr1_2 exon 14628295 14629083 14628295 ID=Msa0058300-mRNA-1:exon:5890;Parent=Msa0058300-mRNA-1
chr1_2 exon 14629803 14629952 14629803 ID=Msa0058300-mRNA-1:exon:5891;Parent=Msa0058300-mRNA-1
chr1_2 exon 14630241 14630511 14630241 ID=Msa0058300-mRNA-1:exon:5892;Parent=Msa0058300-mRNA-1
chr1_2 exon 14630626 14630718 14630626 ID=Msa0058300-mRNA-1:exon:5893;Parent=Msa0058300-mRNA-1
chr1_2 exon 14631704 14631878 14631704 ID=Msa0058300-mRNA-1:exon:5894;Parent=Msa0058300-mRNA-1
chr1_2 exon 14631970 14632212 14631970 ID=Msa0058300-mRNA-1:exon:5895;Parent=Msa0058300-mRNA-1
chr1_2 exon 14632477 14632671 14632477 ID=Msa0058300-mRNA-1:exon:5896;Parent=Msa0058300-mRNA-1
chr1_2 exon 14633024 14633568 14633024 ID=Msa0058300-mRNA-1:exon:5897;Parent=Msa0058300-mRNA-1
chr1_2 CDS 14628295 14629083 14628295 ID=Msa0058300-mRNA-1:cds;Parent=Msa0058300-mRNA-1
chr1_2 CDS 14629803 14629952 14629803 ID=Msa0058300-mRNA-1:cds;Parent=Msa0058300-mRNA-1
chr1_2 CDS 14630241 14630511 14630241 ID=Msa0058300-mRNA-1:cds;Parent=Msa0058300-mRNA-1
chr1_2 CDS 14630626 14630718 14630626 ID=Msa0058300-mRNA-1:cds;Parent=Msa0058300-mRNA-1
chr1_2 CDS 14631704 14631878 14631704 ID=Msa0058300-mRNA-1:cds;Parent=Msa0058300-mRNA-1
chr1_2 CDS 14631970 14632212 14631970 ID=Msa0058300-mRNA-1:cds;Parent=Msa0058300-mRNA-1
chr1_2 CDS 14632477 14632671 14632477 ID=Msa0058300-mRNA-1:cds;Parent=Msa0058300-mRNA-1
chr1_2 CDS 14633024 14633222 14633024 ID=Msa0058300-mRNA-1:cds;Parent=Msa0058300-mRNA-1
chr1_2 three_prime_UTR 14633223 14633568 14633223 ID=Msa0058300-mRNA-1:three_prime_utr;Parent=Msa0058300-mRNA-1
Gene Sequence

>Msa0058300

ATGGCTATTATACCTCGTCAAGCTAAAAGACCAACTGGGTTATGGGTGAAGATGACAGCTGTAACAATTTTGGGTCTCTGTTTTATTTTTGTTTGGACTGTGTTTTCTTCTTCATCTTCTTCTGTTAGTTTTCAAAGGGAAAGTTTTGAAGATATTTCAGAACCTGTTTCTTCTTCTTCTTCTTCTTCCAATGTTAAAAAACCAACACCAAAATCAGAAAAACGTGTGGAAGTGGAGAAAGATCATAAATTTCATAGGAGTGATGAGAAAAAGATTGATGATGGGTCATCTTCAAATTCTTCTTCTACGCGCCCTCATAAGAAAGAAGTGGCGCGTGGAAAGAAACGTGTGCATAAGAAGGAGGATAATAAAGAGAATGTGAATCAAGGGTCATTGGAGAAAGAGGAAGAAGGTGAAAAAGAGTTGGAAGATAAAGAAGAAGGATTGGATCATGAGAGTGAAGTTGATTTGGATTCTGATGTTGTTGGTGGTGATGATTCAGCTGAATCCGTCGATGAAGATTCTGAGATATTGGAAGAGTTAAAGAAAACAAAGAAGGGAAAAGTGAAAGGACCTTTGTTTGAATCAAATGTTAACTATAGATGGAAAATGTGCAATACTAGAAGCAAGCATAACTATATTCCTTGCATTGATATCGAAGTAGGTGGTGGAAAGGTGCAGTACCGGCACACGGAGAGGAGTTGTCCAAGGATGCCCTTCATGTGTATGGTTCCTCTTCCTCTTGATGGTTATGAGTCTCCGGTGCCGTGGCCTGAGAGCAAATTGAAGATATTTTATAAGAATGTTGCACACCCGAAACTAGCTGCATATATTAAAAAACATCGTTGGTTGGTGGATTCTGGAGAATATCTTACTTTCCCTCAAAACCAGTCAGAATTTTTGGGAGGGATTCAGCACTATCTTGAGTCGATTGAAGAGATGGTACCAGACATTGAGTGGGGTAAAAATATTCGTGTTGTCCTGGACATTGGATGTACAGATTCAAGCTTCGCAGCTGCTCTCTTCGATAAGGGTGTTTTAACATTGTCACTTGGCTTGAAAGATGACCTAGTGGACTTAGCTCAAGTGGCACTCGAGCGCGGCTTCCCAACATTGGTTAGCCCTTTTGCTAGAAGGAGACTTCCTTTTCCAAGTCAAGTTTTTGATGCTATAAATTGTGCACGTTGCAGCATACCTTGGCATTCCAATGGGGGTAAACTTCTACTGGAGATGAATCGGATTCTAAGACCTGGTGGATACTTTATCATGTCAACTAAACATGATAGCATTGAAGAAGAAGAAGCCATGACCGCACTGACAGCCTCTATTTGTTGGAATGTTCTGGCACATAAAAGTGATGATGTTGGTGAAGTTGGAGTTAGAATATATCAAAAGCCTGAAGGAAATGACATATACGAATTGAGAAGGAAGAAGATCCCACCAATTTGCAAAGAAAATGAAAATCCCGACGCAGTCTGGCATGTTCCAATCAAGACTTGTTTGCACACCATTCCAATTGGAATTGAACAGCATGGGGCAGAGTGGCCTGAGGAATGGCCGAAGAGGCTCGAAACTTTTCCTGACTGGATGAACAATAAGGAGAAATTGATCGCGGACACCAACCATTGGAACGCCATAGTTAACAAGTCATATCTCAATGGAATGGGCATTAACTGGACAAATATCAGGAATGTAATGGACATGAAATCCATCTATGGAGGATTAGCTGCAGCTCTATCTAAACATAACGTTTGGGTGATGAATGTAGTACCTGTCCATGCACCGGATACGCTTCCCATAATTTTTGAACGGGGATTTTTTGGCGTCTATCACGATTGGTGCGAGTCTTTTGGTACTTATCCAAGAACTTATGACCTTCTGCATGCTGATCATTTGTTCTCACGCCTCAAAAGCAGGTGCAAGCAACCTGTGTCGATTGTTGTTGAGATGGACCGTATCTTACGGCCAGGAGGGTTGACGATCATACGTGATAAAGTTGAAATCCTAAATGCATTGGAGGAAATATTGAGAAGTATGCAATGGGAAATCAGAATGACTTTCTACCAGGAAAAAGAGGGTATCTTATGTGCACAGAAAACTCTATGGAGGCCTTGA
Protein sequence

>Msa0058300

MAIIPRQAKRPTGLWVKMTAVTILGLCFIFVWTVFSSSSSSVSFQRESFEDISEPVSSSSSSSNVKKPTPKSEKRVEVEKDHKFHRSDEKKIDDGSSSNSSSTRPHKKEVARGKKRVHKKEDNKENVNQGSLEKEEEGEKELEDKEEGLDHESEVDLDSDVVGGDDSAESVDEDSEILEELKKTKKGKVKGPLFESNVNYRWKMCNTRSKHNYIPCIDIEVGGGKVQYRHTERSCPRMPFMCMVPLPLDGYESPVPWPESKLKIFYKNVAHPKLAAYIKKHRWLVDSGEYLTFPQNQSEFLGGIQHYLESIEEMVPDIEWGKNIRVVLDIGCTDSSFAAALFDKGVLTLSLGLKDDLVDLAQVALERGFPTLVSPFARRRLPFPSQVFDAINCARCSIPWHSNGGKLLLEMNRILRPGGYFIMSTKHDSIEEEEAMTALTASICWNVLAHKSDDVGEVGVRIYQKPEGNDIYELRRKKIPPICKENENPDAVWHVPIKTCLHTIPIGIEQHGAEWPEEWPKRLETFPDWMNNKEKLIADTNHWNAIVNKSYLNGMGINWTNIRNVMDMKSIYGGLAAALSKHNVWVMNVVPVHAPDTLPIIFERGFFGVYHDWCESFGTYPRTYDLLHADHLFSRLKSRCKQPVSIVVEMDRILRPGGLTIIRDKVEILNALEEILRSMQWEIRMTFYQEKEGILCAQKTLWRP*