AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0446580


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0446580 MtrunA17_Chr3g0087741 90.541 444 13 2 1 416 1 443 0.0 812
Msa0446580 MtrunA17_Chr4g0010781 61.333 450 130 8 1 415 1 441 1.60e-176 499
Msa0446580 MtrunA17_Chr5g0426951 37.088 364 188 5 73 401 69 426 3.46e-70 229
Msa0446580 MtrunA17_Chr3g0123861 35.493 355 176 8 89 399 82 427 3.10e-53 183
Msa0446580 MtrunA17_Chr4g0010801 48.503 167 47 1 179 306 1 167 3.21e-44 152
Msa0446580 MtrunA17_Chr2g0333221 27.614 373 208 6 78 397 59 422 6.83e-41 151
Msa0446580 MtrunA17_Chr6g0478651 28.117 377 211 7 88 410 67 437 1.83e-36 139
Msa0446580 MtrunA17_Chr8g0334811 30.814 344 175 15 90 383 15 345 1.66e-32 127
Msa0446580 MtrunA17_Chr4g0010811 63.333 90 30 3 327 414 9 97 2.87e-26 101
Msa0446580 MtrunA17_Chr2g0322181 29.805 359 205 13 80 395 1 355 2.30e-24 104
Msa0446580 MtrunA17_Chr4g0025401 27.874 348 208 12 80 387 1 345 2.13e-22 98.6
Msa0446580 MtrunA17_Chr7g0269841 23.684 342 211 8 83 395 20 340 1.06e-14 74.7
Msa0446580 MtrunA17_Chr4g0006391 25.648 347 195 9 89 391 4 331 1.17e-12 68.6
Msa0446580 MtrunA17_Chr2g0324921 23.599 339 208 6 89 391 4 327 1.00e-10 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0446580 AT5G48030.1 53.548 465 155 11 1 414 1 455 1.11e-155 447
Msa0446580 AT1G28210.1 32.817 387 208 7 63 401 5 387 1.30e-64 213
Msa0446580 AT1G28210.3 32.817 387 208 7 63 401 5 387 1.38e-64 212
Msa0446580 AT1G28210.2 32.817 387 208 7 63 401 5 387 2.65e-64 212
Msa0446580 AT2G22360.1 35.411 353 174 6 89 397 86 428 2.77e-55 189
Msa0446580 AT4G39960.1 35.180 361 171 8 89 397 85 434 3.15e-54 186
Msa0446580 AT4G39960.2 35.180 361 171 8 89 397 85 434 3.15e-54 186
Msa0446580 AT1G80030.2 29.086 361 196 6 89 397 75 427 2.82e-42 155
Msa0446580 AT1G80030.3 29.086 361 196 6 89 397 75 427 2.82e-42 155
Msa0446580 AT1G80030.1 29.086 361 196 6 89 397 75 427 2.82e-42 155
Msa0446580 AT1G80030.4 29.086 361 196 6 89 397 75 427 3.40e-42 155
Msa0446580 AT3G17830.1 31.268 355 198 6 89 397 63 417 1.40e-41 154
Msa0446580 AT5G22060.1 28.940 349 198 13 90 395 15 356 9.79e-26 108
Msa0446580 AT3G44110.1 28.696 345 203 12 90 395 15 355 2.04e-23 102
Msa0446580 AT3G44110.2 30.164 305 155 11 90 349 15 306 6.91e-21 93.6
Msa0446580 AT3G62600.1 25.287 348 192 8 88 396 25 343 1.16e-16 81.3
Msa0446580 AT1G10350.1 23.460 341 218 7 89 391 4 339 6.49e-13 70.1
Msa0446580 AT5G01390.1 25.656 343 195 10 89 391 4 326 2.39e-12 68.2
Msa0446580 AT1G59725.1 23.188 345 196 9 89 391 4 321 2.10e-11 65.1

Find 147 sgRNAs with CRISPR-Local

Find 710 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGAGCAGCAAATACTTATT+TGG 0.161907 3_3:+23011058 Msa0446580:CDS
TTACAGCGCTTACAGGTTTC+AGG 0.172339 3_3:-23014575 None:intergenic
GTCAGTTAAATTGGATATTA+TGG 0.190985 3_3:+23015365 Msa0446580:CDS
CCCTTTGGAGGCGGTGGCTT+TGG 0.221063 3_3:+23013728 Msa0446580:CDS
AGGATATGGGTTGGTAATCT+TGG 0.240599 3_3:-23009692 None:intergenic
AGCAACCAAGTCAGTTAAAT+TGG 0.248112 3_3:+23015356 Msa0446580:CDS
TAATTCTCAATTAATTTATA+AGG 0.249114 3_3:+23020177 Msa0446580:three_prime_UTR
GGAAAAGCTGCTTCGGCTTC+TGG 0.249779 3_3:+23019973 Msa0446580:CDS
GCGGCGGCTTCTTGCCTGAT+TGG 0.257795 3_3:-23020049 None:intergenic
CTGTACAAGCTGGCGTATTT+AGG 0.265546 3_3:+23014729 Msa0446580:CDS
GAATGATGAATTAAAGGATA+TGG 0.273028 3_3:-23009706 None:intergenic
TGACAACAATGAAACCATTA+AGG 0.276719 3_3:+23016046 Msa0446580:CDS
ATTCAGGTCCCAACTCTTAC+TGG 0.281089 3_3:+23019020 Msa0446580:CDS
GGAGCAGCAAATACTTATTT+GGG 0.282978 3_3:+23011059 Msa0446580:CDS
TTCTGACCGTGTTGTGTTCC+AGG 0.285979 3_3:-23019151 None:intergenic
ATTGAAGAACTGGGTGCTAT+TGG 0.286647 3_3:+23011037 Msa0446580:CDS
GATGGTGGCTTTGGTCCCTT+TGG 0.298687 3_3:+23013713 Msa0446580:CDS
ATTTGTTGCGGAGGAGATTA+GGG 0.299070 3_3:-23009966 None:intergenic
GTGTCTGAATGATGAATTAA+AGG 0.311553 3_3:-23009712 None:intergenic
GAAATAAAGAAAGCATACTA+TGG 0.314834 3_3:+23011394 Msa0446580:CDS
CTGAATGGTTCCACCCAAAA+TGG 0.317206 3_3:-23019003 None:intergenic
AATCGTTCTTCCAAAGTTAC+TGG 0.320508 3_3:+23010144 Msa0446580:CDS
GCCATTGGAGCGAACCATTT+GGG 0.322584 3_3:-23009917 None:intergenic
TACTGGGGATGTTGTTGTTA+AGG 0.326185 3_3:+23019037 Msa0446580:CDS
CAATCAATTTGTGGCCAATC+AGG 0.338549 3_3:+23020035 Msa0446580:three_prime_UTR
CAATATGAATCTTCCGATAA+AGG 0.341538 3_3:+23019952 Msa0446580:CDS
GGAACCTTGATAAATTATAT+TGG 0.345465 3_3:+23020321 Msa0446580:three_prime_UTR
GTAAACCGAGAAAATGGTTC+TGG 0.348842 3_3:+23013689 Msa0446580:CDS
CGCCATTGGAGCGAACCATT+TGG 0.350709 3_3:-23009918 None:intergenic
TGACCCTTTACAGCGCTTAC+AGG 0.351457 3_3:-23014582 None:intergenic
CTCGGTTTACAAAACCTTCA+TGG 0.359083 3_3:-23013676 None:intergenic
GGATATAGGACATTGAATTC+AGG 0.359170 3_3:+23010114 Msa0446580:CDS
GATTTGTTGCGGAGGAGATT+AGG 0.361923 3_3:-23009967 None:intergenic
CATATCTGTTTGAAATGTAA+TGG 0.373827 3_3:-23014382 None:intergenic
GGTGGGAGTGGGGTTCCTCC+TGG 0.384899 3_3:+23014545 Msa0446580:intron
AAAATAATTTCCAGTAACTT+TGG 0.386866 3_3:-23010154 None:intergenic
ATGGTGTTAAATTGAAGAAC+TGG 0.387127 3_3:+23011027 Msa0446580:CDS
ATCACCAGGTCGATCTCCTT+CGG 0.389962 3_3:-23016093 None:intergenic
CTTGTTTCGCAGGTGCGTCC+TGG 0.401076 3_3:+23019133 Msa0446580:intron
GAGTGTTACAAAGGGGATAT+AGG 0.403157 3_3:+23010100 Msa0446580:CDS
GGATATGGGTTGGTAATCTT+GGG 0.411022 3_3:-23009691 None:intergenic
TTTAACTGACTTGGTTGCTC+TGG 0.411207 3_3:-23015352 None:intergenic
TTGAAGAACTGGGTGCTATT+GGG 0.413042 3_3:+23011038 Msa0446580:CDS
GGTTCTGGAGATGGTGGCTT+TGG 0.418459 3_3:+23013704 Msa0446580:CDS
TGAACAATTGCAGGTGGGAG+TGG 0.421996 3_3:+23014533 Msa0446580:intron
ATTTGGGGAAGAAGATGATA+AGG 0.426271 3_3:-23009901 None:intergenic
TTATCATCTTCTTCCCCAAA+TGG 0.426906 3_3:+23009903 Msa0446580:exon
TCACCAGGTCGATCTCCTTC+GGG 0.432930 3_3:-23016092 None:intergenic
CCCCAAATGGTTCGCTCCAA+TGG 0.433535 3_3:+23009916 Msa0446580:exon
GACTACATGTGGTGCATGTA+AGG 0.435204 3_3:+23014757 Msa0446580:CDS
CGATAAAGGAAAAGCTGCTT+CGG 0.441523 3_3:+23019966 Msa0446580:CDS
GAACAATTGCAGGTGGGAGT+GGG 0.444602 3_3:+23014534 Msa0446580:intron
CAGGTTTCAGGTCTTGTACC+AGG 0.447146 3_3:-23014563 None:intergenic
ACCATTAAGGTTTACAAAAG+TGG 0.448952 3_3:+23016059 Msa0446580:CDS
GGTGGCTTTGGTCCCTTTGG+AGG 0.453256 3_3:+23013716 Msa0446580:CDS
GGGGCAACTAGATCCATTCA+TGG 0.455696 3_3:+23011080 Msa0446580:CDS
ATTTATACCTGATCCATGAA+TGG 0.455766 3_3:-23011093 None:intergenic
ACTAGATCCATTCATGGATC+AGG 0.467009 3_3:+23011086 Msa0446580:CDS
TGCTCCAATATAATTTATCA+AGG 0.468946 3_3:-23020325 None:intergenic
AAGAAGAAGCTTGACGCCAT+TGG 0.469160 3_3:-23009932 None:intergenic
TAATCGGAACATTGGCGGAC+AGG 0.471543 3_3:+23014217 Msa0446580:CDS
ATTCCCGCTGTCTATCTGTC+AGG 0.476235 3_3:-23019903 None:intergenic
GGTGAATTTCAGGTATATGA+AGG 0.477900 3_3:+23010078 Msa0446580:intron
CTCTTTAATCGGAACATTGG+CGG 0.480670 3_3:+23014212 Msa0446580:CDS
TTCAGGTCCCAACTCTTACT+GGG 0.483137 3_3:+23019021 Msa0446580:CDS
GAAACCTGTAAGCGCTGTAA+AGG 0.483461 3_3:+23014578 Msa0446580:CDS
GTTAAATTGGATATTATGGC+TGG 0.484283 3_3:+23015369 Msa0446580:CDS
GGCTTTGGTCCCTTTGGAGG+CGG 0.484799 3_3:+23013719 Msa0446580:CDS
TTTGGTCCCTTTGGAGGCGG+TGG 0.485763 3_3:+23013722 Msa0446580:CDS
TTTGGGGAAGAAGATGATAA+GGG 0.487932 3_3:-23009900 None:intergenic
AAATAAAGAAAGCATACTAT+GGG 0.491279 3_3:+23011395 Msa0446580:CDS
AAACCTGTAAGCGCTGTAAA+GGG 0.493634 3_3:+23014579 Msa0446580:CDS
AATATCCAATTTAACTGACT+TGG 0.496445 3_3:-23015361 None:intergenic
AATCATTTACAATCAATTTG+TGG 0.496758 3_3:+23020026 Msa0446580:three_prime_UTR
TAATATTCATTAACATAAAG+AGG 0.497253 3_3:+23020253 Msa0446580:three_prime_UTR
CGAGAAAATGGTTCTGGAGA+TGG 0.499609 3_3:+23013695 Msa0446580:CDS
TGTAAGCGCTGTAAAGGGTC+AGG 0.500700 3_3:+23014584 Msa0446580:CDS
AATGATGAATTAAAGGATAT+GGG 0.506228 3_3:-23009705 None:intergenic
GATCCTTCTCTACGGAAGAC+AGG 0.514946 3_3:-23016246 None:intergenic
ACAGACTAGGATACTGCAAC+AGG 0.519543 3_3:-23020222 None:intergenic
TCCAAAGCCACCGCCTCCAA+AGG 0.520033 3_3:-23013729 None:intergenic
CAACATCCCCAGTAAGAGTT+GGG 0.525837 3_3:-23019028 None:intergenic
ATGAATTAAAGGATATGGGT+TGG 0.533651 3_3:-23009701 None:intergenic
TTCTACAAAACTTCAATAGC+AGG 0.534126 3_3:-23020071 None:intergenic
ATATGAAGGAGTGTTACAAA+GGG 0.535315 3_3:+23010092 Msa0446580:CDS
TGTGGTGCATGTAAGGGATC+TGG 0.541793 3_3:+23014764 Msa0446580:CDS
CCAAAGCCACCGCCTCCAAA+GGG 0.546016 3_3:-23013728 None:intergenic
GACCTCTTTAATCGGAACAT+TGG 0.548612 3_3:+23014209 Msa0446580:CDS
AAAACGTCAAGAGTATGATC+AGG 0.549248 3_3:+23012349 Msa0446580:CDS
GATATGTAGGTTGGCCATGA+AGG 0.551132 3_3:+23013662 Msa0446580:intron
TCATAAAAGTCCTTTGCCAA+TGG 0.553690 3_3:-23011337 None:intergenic
TGTTCCGATTAAAGAGGTCA+TGG 0.554621 3_3:-23014205 None:intergenic
TGATCTTTATGTTACTGTCA+AGG 0.555206 3_3:+23016112 Msa0446580:CDS
ACATTTGCAGAGTATGCAGT+TGG 0.555795 3_3:+23020002 Msa0446580:three_prime_UTR
ACAACATCCCCAGTAAGAGT+TGG 0.560824 3_3:-23019029 None:intergenic
GAGTTTCTGCAAGTCATGCA+AGG 0.561847 3_3:+23015317 Msa0446580:intron
CGCCAATGTTCCGATTAAAG+AGG 0.565093 3_3:-23014211 None:intergenic
GATCCTGTCTTCCGTAGAGA+AGG 0.566629 3_3:+23016243 Msa0446580:CDS
TACATATACCCAAAAGTGGA+GGG 0.567119 3_3:-23020126 None:intergenic
TATATGAAGGAGTGTTACAA+AGG 0.567598 3_3:+23010091 Msa0446580:CDS
AACAATTGCAGGTGGGAGTG+GGG 0.568110 3_3:+23014535 Msa0446580:intron
ATACTGATTGCAGTTGGAGA+TGG 0.568551 3_3:+23011008 Msa0446580:intron
TGATAAATTATATTGGAGCA+TGG 0.568908 3_3:+23020328 Msa0446580:three_prime_UTR
CAAGTCATGCAAGGGTGCAA+AGG 0.570979 3_3:+23015326 Msa0446580:CDS
CGGCAGACATCTGTACAAGC+TGG 0.577081 3_3:+23014719 Msa0446580:intron
ATATTACATATACCCAAAAG+TGG 0.584048 3_3:-23020130 None:intergenic
AGTAAGAGTTGGGACCTGAA+TGG 0.587664 3_3:-23019018 None:intergenic
TGTCTTCCGTAGAGAAGGAT+CGG 0.591949 3_3:+23016248 Msa0446580:CDS
GATATGATTTGCAACACTTG+TGG 0.595840 3_3:+23014399 Msa0446580:CDS
ACAAGCTGGCGTATTTAGGA+TGG 0.596589 3_3:+23014733 Msa0446580:CDS
CCATTGGAGCGAACCATTTG+GGG 0.598411 3_3:-23009916 None:intergenic
GAATATCCGATCCTTCTCTA+CGG 0.600340 3_3:-23016254 None:intergenic
ACTACATGTGGTGCATGTAA+GGG 0.605467 3_3:+23014758 Msa0446580:CDS
GAGAGTATACGGATTTGTTG+CGG 0.605843 3_3:-23009978 None:intergenic
GAGCAGCAAATACTTATTTG+GGG 0.607798 3_3:+23011060 Msa0446580:CDS
ATTAAGGTTTACAAAAGTGG+TGG 0.608388 3_3:+23016062 Msa0446580:CDS
AAAACTTCAATAGCAGGCGG+CGG 0.611264 3_3:-23020065 None:intergenic
AAGGTGGTTCTGAAACAGAA+AGG 0.617446 3_3:+23019172 Msa0446580:CDS
CATTGGCGGACAGGATGTCA+AGG 0.620017 3_3:+23014226 Msa0446580:CDS
GGGATCTGGCAAAATTGTCA+AGG 0.620983 3_3:+23014778 Msa0446580:CDS
TTACATATACCCAAAAGTGG+AGG 0.621315 3_3:-23020127 None:intergenic
TGGAACACAACACGGTCAGA+AGG 0.622014 3_3:+23019153 Msa0446580:CDS
TTTGTTGCGGAGGAGATTAG+GGG 0.623985 3_3:-23009965 None:intergenic
GAAAATGGTTCTGGAGATGG+TGG 0.624903 3_3:+23013698 Msa0446580:CDS
AAACCTGACAGATAGACAGC+GGG 0.627667 3_3:+23019900 Msa0446580:CDS
GATATGGGTTGGTAATCTTG+GGG 0.629745 3_3:-23009690 None:intergenic
ACATATACCCAAAAGTGGAG+GGG 0.632477 3_3:-23020125 None:intergenic
ATACTGCAACAGGTGCATGA+AGG 0.640492 3_3:-23020212 None:intergenic
TATTATATACAACACAGACT+AGG 0.641337 3_3:-23020235 None:intergenic
AGTTTCTGCAAGTCATGCAA+GGG 0.642039 3_3:+23015318 Msa0446580:CDS
TCAGGTCCCAACTCTTACTG+GGG 0.642067 3_3:+23019022 Msa0446580:CDS
GTGCGTCCTGGAACACAACA+CGG 0.643446 3_3:+23019145 Msa0446580:CDS
TACAAAACTTCAATAGCAGG+CGG 0.652302 3_3:-23020068 None:intergenic
AGTATACGGATTTGTTGCGG+AGG 0.656556 3_3:-23009975 None:intergenic
ACAGTAACATAAAGATCACC+AGG 0.657451 3_3:-23016107 None:intergenic
AGCAGCAAATACTTATTTGG+GGG 0.661568 3_3:+23011061 Msa0446580:CDS
GCGCTGTAAAGGGTCAGGAG+TGG 0.670919 3_3:+23014589 Msa0446580:CDS
ATATGGGTTGGTAATCTTGG+GGG 0.673911 3_3:-23009689 None:intergenic
TATGAAGGAGTGTTACAAAG+GGG 0.676481 3_3:+23010093 Msa0446580:CDS
TGGTGTTAAATTGAAGAACT+GGG 0.678693 3_3:+23011028 Msa0446580:CDS
AGTGGTGGTGCAGATCCCGA+AGG 0.680845 3_3:+23016077 Msa0446580:CDS
AACACAACACGGTCAGAAGG+TGG 0.683119 3_3:+23019156 Msa0446580:CDS
GATCCCGAAGGAGATCGACC+TGG 0.690632 3_3:+23016089 Msa0446580:CDS
TTTAGGATGGAGACTACATG+TGG 0.696317 3_3:+23014746 Msa0446580:CDS
AATAAAGAAAGCATACTATG+GGG 0.714970 3_3:+23011396 Msa0446580:CDS
GAAACCTGACAGATAGACAG+CGG 0.716980 3_3:+23019899 Msa0446580:intron
GTTTCAGGTCTTGTACCAGG+AGG 0.745812 3_3:-23014560 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTTAAATAAATTAAAAA+AGG - chr3_3:23015587-23015606 None:intergenic 0.0%
!! ATTAAATATAAAATTTATTA+AGG + chr3_3:23016767-23016786 Msa0446580:intron 0.0%
!!! TTGTTTTTTTATTGATTTTT+TGG + chr3_3:23010048-23010067 Msa0446580:intron 10.0%
!!! AATTTAGAGATTTTTTTAAA+AGG - chr3_3:23010658-23010677 None:intergenic 10.0%
!! TATTATTAGAAAACATTATT+AGG + chr3_3:23012448-23012467 Msa0446580:intron 10.0%
!! AAAAACAAAAACAAAAAAAT+TGG + chr3_3:23013053-23013072 Msa0446580:intron 10.0%
!!! ATTTATTTTTTATGTTTAAC+CGG + chr3_3:23013615-23013634 Msa0446580:intron 10.0%
!! ATATTAATTTATATTGTGTT+TGG + chr3_3:23014059-23014078 Msa0446580:intron 10.0%
!! TTTAAATAAATTAAAAAAGG+TGG - chr3_3:23015584-23015603 None:intergenic 10.0%
!! CAATTATTTAAATAGTTAAT+TGG - chr3_3:23016682-23016701 None:intergenic 10.0%
!!! TAAAATAATCTATATTTTCT+TGG + chr3_3:23018967-23018986 Msa0446580:intron 10.0%
!!! AAAATAATCTATATTTTCTT+GGG + chr3_3:23018968-23018987 Msa0446580:intron 10.0%
!! TAATTCTCAATTAATTTATA+AGG + chr3_3:23020177-23020196 Msa0446580:three_prime_UTR 10.0%
!!! TTTTTTTATTGATTTTTTGG+TGG + chr3_3:23010051-23010070 Msa0446580:intron 15.0%
!!! TTTTTAAGTAAGTTTCATTA+TGG + chr3_3:23010609-23010628 Msa0446580:intron 15.0%
!! TTATATAACAAAATCAAGAA+CGG - chr3_3:23011149-23011168 None:intergenic 15.0%
!!! TCAATTTTAAGTTTTTAACA+AGG - chr3_3:23011532-23011551 None:intergenic 15.0%
!! CATTAAAATAATAATACAAG+AGG - chr3_3:23011799-23011818 None:intergenic 15.0%
!!! TAATGTTTTCTAATAATAGT+AGG - chr3_3:23012446-23012465 None:intergenic 15.0%
!!! TGTTTTTTTATAAACTCAAA+CGG - chr3_3:23012865-23012884 None:intergenic 15.0%
!!! CATCTATATTTTATGAATTA+AGG + chr3_3:23014441-23014460 Msa0446580:intron 15.0%
!!! AAGGTTAAATTTTAATTTCA+AGG - chr3_3:23014630-23014649 None:intergenic 15.0%
!!! TAACTTTTTTGTTAATTTGA+TGG + chr3_3:23014680-23014699 Msa0446580:intron 15.0%
!! TTGATTAAAATTTAGAGATA+CGG + chr3_3:23014841-23014860 Msa0446580:intron 15.0%
!! TATCTATTATTATGATTTCA+GGG - chr3_3:23015177-23015196 None:intergenic 15.0%
!! TTATCTATTATTATGATTTC+AGG - chr3_3:23015178-23015197 None:intergenic 15.0%
!! TCATAATAATAGATAATGAT+AGG + chr3_3:23015182-23015201 Msa0446580:intron 15.0%
!!! ATATTAATAATTGTCTTGTT+TGG - chr3_3:23015873-23015892 None:intergenic 15.0%
!!! ACATATTTTTATACATTTGA+AGG + chr3_3:23016020-23016039 Msa0446580:intron 15.0%
!!! CATATTTTTATACATTTGAA+GGG + chr3_3:23016021-23016040 Msa0446580:intron 15.0%
!!! AACTTTCTTTTTTCTTTTTT+GGG + chr3_3:23016381-23016400 Msa0446580:intron 15.0%
!!! AAAAGCAGATTTATTATTTT+TGG - chr3_3:23016886-23016905 None:intergenic 15.0%
!! GATTATAACTTATAAGTAAT+AGG - chr3_3:23017428-23017447 None:intergenic 15.0%
!! GTTAGTTAAATAAGTTAATT+AGG - chr3_3:23017478-23017497 None:intergenic 15.0%
!!! GGTTTTTTTATATTTTAGAA+CGG + chr3_3:23018045-23018064 Msa0446580:intron 15.0%
!! AAAAAAGTGATAAGTTTATT+TGG - chr3_3:23018147-23018166 None:intergenic 15.0%
!! AAATCCAAAAAAAATAAACT+TGG + chr3_3:23018195-23018214 Msa0446580:intron 15.0%
!!! TATAACAGTTTCATAATTTT+TGG + chr3_3:23018222-23018241 Msa0446580:intron 15.0%
!!! ATAACAGTTTCATAATTTTT+GGG + chr3_3:23018223-23018242 Msa0446580:intron 15.0%
!! TAATATTCATTAACATAAAG+AGG + chr3_3:23020253-23020272 Msa0446580:three_prime_UTR 15.0%
!! AATGATGAATTAAAGGATAT+GGG - chr3_3:23009708-23009727 None:intergenic 20.0%
!!! ATTTTGTTTGTAGAATACAA+AGG - chr3_3:23009749-23009768 None:intergenic 20.0%
!! TTTCACTCTTCAAAAAAATT+AGG + chr3_3:23009841-23009860 Msa0446580:five_prime_UTR 20.0%
!! TTCACTCTTCAAAAAAATTA+GGG + chr3_3:23009842-23009861 Msa0446580:five_prime_UTR 20.0%
!! AAAATAATTTCCAGTAACTT+TGG - chr3_3:23010157-23010176 None:intergenic 20.0%
!!! ACTGGAAATTATTTTTACAA+TGG + chr3_3:23010162-23010181 Msa0446580:CDS 20.0%
!!! TTTAGAAGTTTTGAAATTGA+TGG + chr3_3:23010328-23010347 Msa0446580:intron 20.0%
!!! TGTCTTTTTTTCATAACTAA+GGG - chr3_3:23010725-23010744 None:intergenic 20.0%
!!! ATGTCTTTTTTTCATAACTA+AGG - chr3_3:23010726-23010745 None:intergenic 20.0%
!! TTAGTTATGAAAAAAAGACA+TGG + chr3_3:23010725-23010744 Msa0446580:intron 20.0%
!!! TCATTTTCCCAAATTATTAT+CGG - chr3_3:23010786-23010805 None:intergenic 20.0%
!!! TGTCCATTATTATTTTGATT+TGG + chr3_3:23011178-23011197 Msa0446580:intron 20.0%
!! TCACCAAATCAAAATAATAA+TGG - chr3_3:23011184-23011203 None:intergenic 20.0%
!! GTTTCGTCATATTTAATTAT+CGG + chr3_3:23011215-23011234 Msa0446580:intron 20.0%
!!! AAATAAAGAAAGCATACTAT+GGG + chr3_3:23011395-23011414 Msa0446580:CDS 20.0%
!!! TCTTAGGTCAAATATTTTTT+AGG + chr3_3:23011454-23011473 Msa0446580:intron 20.0%
!!! CTTAGGTCAAATATTTTTTA+GGG + chr3_3:23011455-23011474 Msa0446580:intron 20.0%
!!! TTAGGTCAAATATTTTTTAG+GGG + chr3_3:23011456-23011475 Msa0446580:intron 20.0%
!! TTTAATGCAAATAGAAAACA+TGG - chr3_3:23011727-23011746 None:intergenic 20.0%
!! TTTCTTTCTTTCTTCATATA+TGG + chr3_3:23011914-23011933 Msa0446580:intron 20.0%
!! AATGCAATTACATAAAGAAT+GGG - chr3_3:23012308-23012327 None:intergenic 20.0%
!!! TAGGCAGTTATTATTTTATT+AGG + chr3_3:23012467-23012486 Msa0446580:intron 20.0%
!!! TTTTTCAAAAAACAAAGGTA+CGG + chr3_3:23012610-23012629 Msa0446580:intron 20.0%
!!! GCTTTTATAGAATATGAAAA+AGG + chr3_3:23012718-23012737 Msa0446580:intron 20.0%
!!! TTTGTTTTTAAACCTTGATA+TGG - chr3_3:23013042-23013061 None:intergenic 20.0%
!! ACTATGTTGAGATAAATAAA+AGG + chr3_3:23013366-23013385 Msa0446580:intron 20.0%
!! GAAAATAAGAACATAAGTAA+AGG + chr3_3:23013466-23013485 Msa0446580:intron 20.0%
!!! CATATATCTCTACAAATTTT+AGG - chr3_3:23013522-23013541 None:intergenic 20.0%
!! ATATATGAGAGAAAAAAGTA+GGG + chr3_3:23013535-23013554 Msa0446580:intron 20.0%
!!! AGATTTCTTTCCTTTTTATT+AGG + chr3_3:23013811-23013830 Msa0446580:intron 20.0%
!! ATTGTAGTATAAATTTCATC+AGG + chr3_3:23013843-23013862 Msa0446580:intron 20.0%
!!! AAATTAATATGCCTTTTACT+GGG - chr3_3:23014049-23014068 None:intergenic 20.0%
!!! TAAATTAATATGCCTTTTAC+TGG - chr3_3:23014050-23014069 None:intergenic 20.0%
!!! GTTTTTATTTCTATTTGGAT+TGG + chr3_3:23014252-23014271 Msa0446580:intron 20.0%
!!! TTTTGTTGAACTTTCTTTTA+TGG + chr3_3:23014335-23014354 Msa0446580:CDS 20.0%
!! AACATTAACATTGTTAAAGA+AGG - chr3_3:23014649-23014668 None:intergenic 20.0%
!! TTTCAACCAACATATATATA+AGG + chr3_3:23014886-23014905 Msa0446580:intron 20.0%
!!! TTTTCACCTTATATATATGT+TGG - chr3_3:23014895-23014914 None:intergenic 20.0%
!! CATATATATAAGGTGAAAAT+TGG + chr3_3:23014896-23014915 Msa0446580:intron 20.0%
!!! TTTGCTTCTTATTATTTTTC+TGG + chr3_3:23015285-23015304 Msa0446580:intron 20.0%
!! AAATAAATTAAAAAAGGTGG+TGG - chr3_3:23015581-23015600 None:intergenic 20.0%
!! TTTCTAATCTTTCAGAAAAA+AGG + chr3_3:23015768-23015787 Msa0446580:intron 20.0%
!! AATATCAGAATTCTGAATTA+TGG - chr3_3:23015821-23015840 None:intergenic 20.0%
!! ACACAATACATAATATGAAA+AGG - chr3_3:23015899-23015918 None:intergenic 20.0%
!! ATTATGTATTGTGTTCAATT+AGG + chr3_3:23015905-23015924 Msa0446580:intron 20.0%
!!! TTAATCTTTTCATAGTTTTG+AGG + chr3_3:23016143-23016162 Msa0446580:intron 20.0%
!! AATCAAGAATTTCTTCATTA+AGG - chr3_3:23016317-23016336 None:intergenic 20.0%
!! CAAAAAAGAAAAAAGAAAGT+TGG - chr3_3:23016382-23016401 None:intergenic 20.0%
!!! CAACTTTCTTTTTTCTTTTT+TGG + chr3_3:23016380-23016399 Msa0446580:intron 20.0%
!!! ACTTTCTTTTTTCTTTTTTG+GGG + chr3_3:23016382-23016401 Msa0446580:intron 20.0%
!! AAAAAAAATATAACTGTCTC+TGG - chr3_3:23016546-23016565 None:intergenic 20.0%
!! ATAACTTATAAGTAATAGGA+AGG - chr3_3:23017424-23017443 None:intergenic 20.0%
!! TTCATAAACATTACTGAAAA+TGG + chr3_3:23018024-23018043 Msa0446580:intron 20.0%
!!! ATTGCCAAGTTTATTTTTTT+TGG - chr3_3:23018202-23018221 None:intergenic 20.0%
!!! TAACAGTTTCATAATTTTTG+GGG + chr3_3:23018224-23018243 Msa0446580:intron 20.0%
!!! GATTATTTTAAGTGATGTTT+AGG - chr3_3:23018957-23018976 None:intergenic 20.0%
!! ATTGTTTATGGATGATAATA+TGG + chr3_3:23019208-23019227 Msa0446580:intron 20.0%
!! TTGTTTATGGATGATAATAT+GGG + chr3_3:23019209-23019228 Msa0446580:intron 20.0%
!! ACCAAAAAATATAACTCATT+AGG + chr3_3:23019312-23019331 Msa0446580:CDS 20.0%
!! TTTAACAAAATGCTTTACTT+CGG - chr3_3:23019563-23019582 None:intergenic 20.0%
!! AATCATTTACAATCAATTTG+TGG + chr3_3:23020026-23020045 Msa0446580:three_prime_UTR 20.0%
! GAATGATGAATTAAAGGATA+TGG - chr3_3:23009709-23009728 None:intergenic 25.0%
! GAATACAAAGGAGAAAAAAA+AGG - chr3_3:23009737-23009756 None:intergenic 25.0%
!!! GGTTTTTCAATTTCAATTCA+GGG + chr3_3:23009863-23009882 Msa0446580:five_prime_UTR 25.0%
!!! TTACGCTTTTTGAGAAATTT+TGG + chr3_3:23010017-23010036 Msa0446580:intron 25.0%
!!! AAATCTGTTTTTTTTCTTGC+TGG + chr3_3:23010206-23010225 Msa0446580:intron 25.0%
!!! AGTTTTGAAATTGATGGAAT+AGG + chr3_3:23010334-23010353 Msa0446580:intron 25.0%
! AATCAAGTCAATTAAATCAG+AGG - chr3_3:23010385-23010404 None:intergenic 25.0%
! ATATAGTGAAAGAAAAGACT+CGG - chr3_3:23010924-23010943 None:intergenic 25.0%
!! GAAATAAAGAAAGCATACTA+TGG + chr3_3:23011394-23011413 Msa0446580:CDS 25.0%
!! AATAAAGAAAGCATACTATG+GGG + chr3_3:23011396-23011415 Msa0446580:CDS 25.0%
! ACCTAAGAATAGATGTATAT+TGG - chr3_3:23011442-23011461 None:intergenic 25.0%
!!! TTATTTCTAATTGCATATGC+TGG + chr3_3:23011581-23011600 Msa0446580:intron 25.0%
!! TATTTCTAATTGCATATGCT+GGG + chr3_3:23011582-23011601 Msa0446580:intron 25.0%
!! CTGATATATTCGCAATTTTT+AGG - chr3_3:23011846-23011865 None:intergenic 25.0%
! TTGTTCTTGATACTATTTAG+TGG + chr3_3:23012224-23012243 Msa0446580:intron 25.0%
! ATGCAATTACATAAAGAATG+GGG - chr3_3:23012307-23012326 None:intergenic 25.0%
! CAATGCAATTACATAAAGAA+TGG - chr3_3:23012309-23012328 None:intergenic 25.0%
! TCTTTATGTAATTGCATTGT+AGG + chr3_3:23012310-23012329 Msa0446580:intron 25.0%
!! CTTTCCAGTAATTTTCATTT+TGG + chr3_3:23012380-23012399 Msa0446580:intron 25.0%
! TTGACCAAAATGAAAATTAC+TGG - chr3_3:23012387-23012406 None:intergenic 25.0%
!!! TTTTCAAAAAACAAAGGTAC+GGG + chr3_3:23012611-23012630 Msa0446580:intron 25.0%
!! TTTTCTACTTCTGCAAATAT+TGG + chr3_3:23012779-23012798 Msa0446580:intron 25.0%
!! TCATTTTCTCAAGAAAGAAA+CGG + chr3_3:23012968-23012987 Msa0446580:intron 25.0%
! ACAAAAAAATTGGTACATCA+TGG + chr3_3:23013063-23013082 Msa0446580:intron 25.0%
! CAAAAAAATTGGTACATCAT+GGG + chr3_3:23013064-23013083 Msa0446580:intron 25.0%
! TAGATAAGTAGGAAATCTAA+AGG + chr3_3:23013192-23013211 Msa0446580:intron 25.0%
! AAGTAAAGGACATTTGTTTA+TGG + chr3_3:23013480-23013499 Msa0446580:intron 25.0%
! GATATATGAGAGAAAAAAGT+AGG + chr3_3:23013534-23013553 Msa0446580:intron 25.0%
! TTAATCCTGTAATAACTTGA+CGG + chr3_3:23013753-23013772 Msa0446580:intron 25.0%
!! AATTAATATGCCTTTTACTG+GGG - chr3_3:23014048-23014067 None:intergenic 25.0%
!! ATATACATTCTAGTCTTCAA+TGG - chr3_3:23014138-23014157 None:intergenic 25.0%
!!! GGTTCGTTTTTATTTCTATT+TGG + chr3_3:23014247-23014266 Msa0446580:intron 25.0%
!! GTATGTTAAGAATTTGTTTG+AGG + chr3_3:23014285-23014304 Msa0446580:intron 25.0%
!! CATATCTGTTTGAAATGTAA+TGG - chr3_3:23014385-23014404 None:intergenic 25.0%
! ATGGCTATGTTATATATATC+CGG + chr3_3:23014699-23014718 Msa0446580:intron 25.0%
! TACTTAAAACATGTGATTTG+CGG - chr3_3:23014945-23014964 None:intergenic 25.0%
!!! CAACTATAGTATTGATTCTA+TGG + chr3_3:23015008-23015027 Msa0446580:intron 25.0%
!!! TATAGTATTGATTCTATGGA+GGG + chr3_3:23015012-23015031 Msa0446580:intron 25.0%
! AATATCCAATTTAACTGACT+TGG - chr3_3:23015364-23015383 None:intergenic 25.0%
! GTCAGTTAAATTGGATATTA+TGG + chr3_3:23015365-23015384 Msa0446580:CDS 25.0%
!!! TTTTATTTAGTCTGAAAAGC+AGG - chr3_3:23015686-23015705 None:intergenic 25.0%
! TAATTTGACTCCATCAATTA+TGG + chr3_3:23015845-23015864 Msa0446580:intron 25.0%
!! GTTATGAGTTTAATGAGTTT+TGG + chr3_3:23015929-23015948 Msa0446580:intron 25.0%
! GAATATCATTGGAATTGAAA+GGG + chr3_3:23017225-23017244 Msa0446580:intron 25.0%
!!! TAGAGTTAACTACTGTTTTT+AGG + chr3_3:23017532-23017551 Msa0446580:intron 25.0%
!!! CTTTGAAGTTAAAACGTTTA+TGG - chr3_3:23017658-23017677 None:intergenic 25.0%
!! AGTATCAAACTTTTATTCTC+AGG + chr3_3:23018072-23018091 Msa0446580:intron 25.0%
! CATCATTCAATTCTTCTATT+TGG - chr3_3:23018315-23018334 None:intergenic 25.0%
! CATATTGTGGAATTATGTAA+GGG - chr3_3:23018363-23018382 None:intergenic 25.0%
! ACATATTGTGGAATTATGTA+AGG - chr3_3:23018364-23018383 None:intergenic 25.0%
!! GTAGTTTAAAATTTCCTGAA+TGG + chr3_3:23018789-23018808 Msa0446580:intron 25.0%
!!! TTATTTTGATGTGTAGTGAT+TGG + chr3_3:23018856-23018875 Msa0446580:intron 25.0%
!! GTATAAGTTTTACCACATTT+TGG + chr3_3:23019077-23019096 Msa0446580:intron 25.0%
! TAACCGATGAAAGTTTAAAT+GGG + chr3_3:23019106-23019125 Msa0446580:intron 25.0%
!!! GCCTAATGAGTTATATTTTT+TGG - chr3_3:23019316-23019335 None:intergenic 25.0%
! AACTAATTGAAAACCATTTC+TGG + chr3_3:23019499-23019518 Msa0446580:intron 25.0%
! TATTTCATGTGCATTTGTAT+CGG - chr3_3:23019799-23019818 None:intergenic 25.0%
! ATATTACATATACCCAAAAG+TGG - chr3_3:23020133-23020152 None:intergenic 25.0%
! TATTATATACAACACAGACT+AGG - chr3_3:23020238-23020257 None:intergenic 25.0%
!!! CTTTTTGCTTTTATCATAAG+TGG + chr3_3:23020297-23020316 Msa0446580:three_prime_UTR 25.0%
! GGAACCTTGATAAATTATAT+TGG + chr3_3:23020321-23020340 Msa0446580:three_prime_UTR 25.0%
! TGCTCCAATATAATTTATCA+AGG - chr3_3:23020328-23020347 None:intergenic 25.0%
! TGATAAATTATATTGGAGCA+TGG + chr3_3:23020328-23020347 Msa0446580:three_prime_UTR 25.0%
ATGAATTAAAGGATATGGGT+TGG - chr3_3:23009704-23009723 None:intergenic 30.0%
GTGTCTGAATGATGAATTAA+AGG - chr3_3:23009715-23009734 None:intergenic 30.0%
!!! TTTTTTGAAGAGTGAAACGA+AGG - chr3_3:23009838-23009857 None:intergenic 30.0%
!! GGGTTTTTCAATTTCAATTC+AGG + chr3_3:23009862-23009881 Msa0446580:five_prime_UTR 30.0%
!!! TATTGATTTTTTGGTGGTGT+TGG + chr3_3:23010057-23010076 Msa0446580:intron 30.0%
!! TATATGAAGGAGTGTTACAA+AGG + chr3_3:23010091-23010110 Msa0446580:CDS 30.0%
!! ATATGAAGGAGTGTTACAAA+GGG + chr3_3:23010092-23010111 Msa0446580:CDS 30.0%
!! TGATTTGGCCATTTTAACAA+TGG + chr3_3:23010235-23010254 Msa0446580:intron 30.0%
!! ATTTTAACAATGGATGGAGA+GGG + chr3_3:23010245-23010264 Msa0446580:intron 30.0%
TATAGTGAAAGAAAAGACTC+GGG - chr3_3:23010923-23010942 None:intergenic 30.0%
! ATGGTGTTAAATTGAAGAAC+TGG + chr3_3:23011027-23011046 Msa0446580:CDS 30.0%
! TGGTGTTAAATTGAAGAACT+GGG + chr3_3:23011028-23011047 Msa0446580:CDS 30.0%
ATTTATACCTGATCCATGAA+TGG - chr3_3:23011096-23011115 None:intergenic 30.0%
TAACAAAATCAAGAACGGAA+TGG - chr3_3:23011144-23011163 None:intergenic 30.0%
AAAAAGTCAGTGACATGTAA+TGG - chr3_3:23011292-23011311 None:intergenic 30.0%
! AAGGACTTTTATGATGTTCT+TGG + chr3_3:23011346-23011365 Msa0446580:CDS 30.0%
GCCAATATACATCTATTCTT+AGG + chr3_3:23011438-23011457 Msa0446580:intron 30.0%
AGAAAATGCAAAGATTTACG+AGG - chr3_3:23011500-23011519 None:intergenic 30.0%
!!! TACTTGTGTTATTTTCCAAG+TGG + chr3_3:23011632-23011651 Msa0446580:intron 30.0%
ATAATAGTCTAAATTGCACG+AGG + chr3_3:23011665-23011684 Msa0446580:intron 30.0%
ATACAAGAGGACTTATATTC+TGG - chr3_3:23011786-23011805 None:intergenic 30.0%
AAGAAGGAAGGAAAAATTTG+AGG - chr3_3:23011872-23011891 None:intergenic 30.0%
AAGAAAGAAAGAAAGAAGGA+AGG - chr3_3:23011884-23011903 None:intergenic 30.0%
GAGAAAGAAAGAAAGAAAGA+AGG - chr3_3:23011888-23011907 None:intergenic 30.0%
! NNNNNNTTCAAGGGCATATG+AGG + chr3_3:23012185-23012204 Msa0446580:intron 30.0%
!! ATCAAGAACAAGAGCATTAA+GGG - chr3_3:23012215-23012234 None:intergenic 30.0%
!! TATCAAGAACAAGAGCATTA+AGG - chr3_3:23012216-23012235 None:intergenic 30.0%
!! ATGATTTGTGAACTGACTTT+TGG + chr3_3:23012265-23012284 Msa0446580:intron 30.0%
!! AATTGCATTGTAGGTTTTGA+AGG + chr3_3:23012319-23012338 Msa0446580:intron 30.0%
!! CGGCATTTTTCAAAAAACAA+AGG + chr3_3:23012605-23012624 Msa0446580:intron 30.0%
GCTAGTATAGAATACGATAA+AGG + chr3_3:23012687-23012706 Msa0446580:intron 30.0%
GTATAGAATACGATAAAGGA+AGG + chr3_3:23012691-23012710 Msa0446580:intron 30.0%
AGATAAGAAGATACAAGAAG+AGG + chr3_3:23012742-23012761 Msa0446580:intron 30.0%
!! TTCCCAAAAATTTTGAGTCT+CGG - chr3_3:23013298-23013317 None:intergenic 30.0%
GTAACAAATAAGCACATAGT+TGG + chr3_3:23013435-23013454 Msa0446580:intron 30.0%
GACATTTGTTTATGGAGATT+GGG + chr3_3:23013488-23013507 Msa0446580:intron 30.0%
ACATTTGTTTATGGAGATTG+GGG + chr3_3:23013489-23013508 Msa0446580:intron 30.0%
! AAAAAAGTAGGGAATGGATT+GGG + chr3_3:23013546-23013565 Msa0446580:intron 30.0%
GGAACTAATTTAGATGAAAC+CGG - chr3_3:23013637-23013656 None:intergenic 30.0%
TCATCTAAATTAGTTCCACA+TGG + chr3_3:23013640-23013659 Msa0446580:intron 30.0%
ATTTATACTACAATGCAGAC+TGG - chr3_3:23013837-23013856 None:intergenic 30.0%
!!! TCTTTTTTTTCCCCAGTAAA+AGG + chr3_3:23014035-23014054 Msa0446580:intron 30.0%
! TTTTCCATGACCTCTTTAAT+CGG + chr3_3:23014201-23014220 Msa0446580:CDS 30.0%
!! CTATAGTATTGATTCTATGG+AGG + chr3_3:23015011-23015030 Msa0446580:intron 30.0%
GTTAAATTGGATATTATGGC+TGG + chr3_3:23015369-23015388 Msa0446580:CDS 30.0%
!! CTTTGCTATTATGTGACATA+TGG + chr3_3:23015421-23015440 Msa0446580:intron 30.0%
!! AATTAAAAAAGGTGGTGGAT+TGG - chr3_3:23015576-23015595 None:intergenic 30.0%
TGACAACAATGAAACCATTA+AGG + chr3_3:23016046-23016065 Msa0446580:CDS 30.0%
ACCATTAAGGTTTACAAAAG+TGG + chr3_3:23016059-23016078 Msa0446580:CDS 30.0%
!! ACCACTTTTGTAAACCTTAA+TGG - chr3_3:23016063-23016082 None:intergenic 30.0%
ATTAAGGTTTACAAAAGTGG+TGG + chr3_3:23016062-23016081 Msa0446580:CDS 30.0%
TGATCTTTATGTTACTGTCA+AGG + chr3_3:23016112-23016131 Msa0446580:CDS 30.0%
GAGGAGATACAAAAGAAAAA+GGG - chr3_3:23016175-23016194 None:intergenic 30.0%
TGAGGAGATACAAAAGAAAA+AGG - chr3_3:23016176-23016195 None:intergenic 30.0%
AAAGGACGAAAAAATGATTG+AGG - chr3_3:23016202-23016221 None:intergenic 30.0%
TTCTAAACCCAAATGATCTT+GGG - chr3_3:23016480-23016499 None:intergenic 30.0%
TTTCTAAACCCAAATGATCT+TGG - chr3_3:23016481-23016500 None:intergenic 30.0%
AAAATATAACTGTCTCTGGT+GGG - chr3_3:23016542-23016561 None:intergenic 30.0%
AAAAATATAACTGTCTCTGG+TGG - chr3_3:23016543-23016562 None:intergenic 30.0%
TTTATTATTCACTGCGTGAA+AGG + chr3_3:23016903-23016922 Msa0446580:intron 30.0%
TTTGGAGATTTCAGTGATAA+TGG + chr3_3:23017203-23017222 Msa0446580:intron 30.0%
!! CAGTGATAATGGAATATCAT+TGG + chr3_3:23017214-23017233 Msa0446580:intron 30.0%
GGAATATCATTGGAATTGAA+AGG + chr3_3:23017224-23017243 Msa0446580:intron 30.0%
CTAAGAATAGGAAGAATGTA+TGG + chr3_3:23017348-23017367 Msa0446580:intron 30.0%
TGGAAAGAATTTAAATTCCC+TGG + chr3_3:23017368-23017387 Msa0446580:intron 30.0%
ATAAGTAATAGGAAGGAGAA+AGG - chr3_3:23017417-23017436 None:intergenic 30.0%
TGAAGTTAAAACGTTTATGG+TGG - chr3_3:23017655-23017674 None:intergenic 30.0%
AGGAGAGTCATTAAAATAGT+GGG - chr3_3:23017701-23017720 None:intergenic 30.0%
!!! GGTTTTCATCTTAATTTGCT+AGG + chr3_3:23018093-23018112 Msa0446580:intron 30.0%
CTAGGCATAATGTAATTTCA+AGG + chr3_3:23018111-23018130 Msa0446580:intron 30.0%
TTGGTCAATGATACATATTG+TGG - chr3_3:23018376-23018395 None:intergenic 30.0%
AATGTGTGAATTTCAGAGTT+TGG + chr3_3:23018494-23018513 Msa0446580:intron 30.0%
!!! AACTCAGAATCAGTTTTGTT+AGG + chr3_3:23018532-23018551 Msa0446580:intron 30.0%
!! GAATTCTCTCTGAAATTTAC+AGG + chr3_3:23018767-23018786 Msa0446580:intron 30.0%
! ATTTTCTTGGGTCTTTTTTC+AGG + chr3_3:23018980-23018999 Msa0446580:intron 30.0%
GTAACCGATGAAAGTTTAAA+TGG + chr3_3:23019105-23019124 Msa0446580:intron 30.0%
AACCGATGAAAGTTTAAATG+GGG + chr3_3:23019107-23019126 Msa0446580:intron 30.0%
!! GAGCAAGTTGATATTGTTTA+TGG + chr3_3:23019196-23019215 Msa0446580:intron 30.0%
TTTGATGTCGTTATTCAATG+TGG + chr3_3:23019383-23019402 Msa0446580:intron 30.0%
! ATTTTCCAACAGGTTTTTGT+CGG - chr3_3:23019459-23019478 None:intergenic 30.0%
! TAATTGAAAACCATTTCTGG+AGG + chr3_3:23019502-23019521 Msa0446580:intron 30.0%
TTTAATGTTGTGCATTCTGA+TGG + chr3_3:23019645-23019664 Msa0446580:intron 30.0%
CAATATGAATCTTCCGATAA+AGG + chr3_3:23019952-23019971 Msa0446580:CDS 30.0%
TTCTACAAAACTTCAATAGC+AGG - chr3_3:23020074-23020093 None:intergenic 30.0%
!! TTTGCTTTTATCATAAGTGG+AGG + chr3_3:23020300-23020319 Msa0446580:three_prime_UTR 30.0%
TTTGGGGAAGAAGATGATAA+GGG - chr3_3:23009903-23009922 None:intergenic 35.0%
ATTTGGGGAAGAAGATGATA+AGG - chr3_3:23009904-23009923 None:intergenic 35.0%
TTATCATCTTCTTCCCCAAA+TGG + chr3_3:23009903-23009922 Msa0446580:exon 35.0%
!! CGCTTTTTGAGAAATTTTGG+TGG + chr3_3:23010020-23010039 Msa0446580:intron 35.0%
! GGTGAATTTCAGGTATATGA+AGG + chr3_3:23010078-23010097 Msa0446580:intron 35.0%
!! TATGAAGGAGTGTTACAAAG+GGG + chr3_3:23010093-23010112 Msa0446580:CDS 35.0%
GGATATAGGACATTGAATTC+AGG + chr3_3:23010114-23010133 Msa0446580:CDS 35.0%
AATCGTTCTTCCAAAGTTAC+TGG + chr3_3:23010144-23010163 Msa0446580:CDS 35.0%
!! TCTTGCTGGTTTGATTGATT+TGG + chr3_3:23010220-23010239 Msa0446580:intron 35.0%
!! TTGGCCATTTTAACAATGGA+TGG + chr3_3:23010239-23010258 Msa0446580:intron 35.0%
CTCTCCATCCATTGTTAAAA+TGG - chr3_3:23010246-23010265 None:intergenic 35.0%
!! CATTTTAACAATGGATGGAG+AGG + chr3_3:23010244-23010263 Msa0446580:intron 35.0%
GTCGACACCGATAATAATTT+GGG + chr3_3:23010776-23010795 Msa0446580:intron 35.0%
GGAGCAGCAAATACTTATTT+GGG + chr3_3:23011059-23011078 Msa0446580:CDS 35.0%
GAGCAGCAAATACTTATTTG+GGG + chr3_3:23011060-23011079 Msa0446580:CDS 35.0%
AGCAGCAAATACTTATTTGG+GGG + chr3_3:23011061-23011080 Msa0446580:CDS 35.0%
TCATAAAAGTCCTTTGCCAA+TGG - chr3_3:23011340-23011359 None:intergenic 35.0%
GAATAGATGTATATTGGCAC+TGG - chr3_3:23011436-23011455 None:intergenic 35.0%
ATTATTTGTAGACAGCCACT+TGG - chr3_3:23011650-23011669 None:intergenic 35.0%
AAACAAAGATGATCCTGAAG+CGG + chr3_3:23012049-23012068 Msa0446580:intron 35.0%
! TGAAATTTCTTTTCCGCTTC+AGG - chr3_3:23012065-23012084 None:intergenic 35.0%
ACATAAAGAATGGGGAAGAA+AGG - chr3_3:23012299-23012318 None:intergenic 35.0%
! AAAACGTCAAGAGTATGATC+AGG + chr3_3:23012349-23012368 Msa0446580:CDS 35.0%
ATGTGCAACAGTTACGTATT+AGG + chr3_3:23012507-23012526 Msa0446580:intron 35.0%
GGTACGTTAGGATAAATACA+AGG + chr3_3:23012632-23012651 Msa0446580:intron 35.0%
ACGTTAGGATAAATACAAGG+AGG + chr3_3:23012635-23012654 Msa0446580:intron 35.0%
CGTTAGGATAAATACAAGGA+GGG + chr3_3:23012636-23012655 Msa0446580:intron 35.0%
GAATACGATAAAGGAAGGAT+TGG + chr3_3:23012696-23012715 Msa0446580:intron 35.0%
GAAAAAAGTAGCAGCATTTC+CGG + chr3_3:23012809-23012828 Msa0446580:intron 35.0%
CAACAACATTTACTAGACTC+CGG - chr3_3:23012831-23012850 None:intergenic 35.0%
GAGTCTAGTAAATGTTGTTG+TGG + chr3_3:23012831-23012850 Msa0446580:intron 35.0%
ACCTTGATATGGTTACAGTA+CGG - chr3_3:23013031-23013050 None:intergenic 35.0%
GGCAGTTATACTAGATAAGT+AGG + chr3_3:23013181-23013200 Msa0446580:intron 35.0%
GGAAATCTAAAGGACAATGT+CGG + chr3_3:23013202-23013221 Msa0446580:intron 35.0%
!! AATGTCGGCTGACATTTTAA+TGG + chr3_3:23013217-23013236 Msa0446580:intron 35.0%
!! ATGTCGGCTGACATTTTAAT+GGG + chr3_3:23013218-23013237 Msa0446580:intron 35.0%
!!! TTTTAATGGGGACTGGTTAT+TGG + chr3_3:23013231-23013250 Msa0446580:intron 35.0%
AAGCTCTCTAATTCTTGGAA+GGG + chr3_3:23013266-23013285 Msa0446580:intron 35.0%
! ACCCGAGACTCAAAATTTTT+GGG + chr3_3:23013293-23013312 Msa0446580:intron 35.0%
!! TCCCAAAAATTTTGAGTCTC+GGG - chr3_3:23013297-23013316 None:intergenic 35.0%
CTCAACATAGTGATTGTAAC+TGG - chr3_3:23013357-23013376 None:intergenic 35.0%
GGACATTTGTTTATGGAGAT+TGG + chr3_3:23013487-23013506 Msa0446580:intron 35.0%
TGAGAGAAAAAAGTAGGGAA+TGG + chr3_3:23013540-23013559 Msa0446580:intron 35.0%
GAAAAAAGTAGGGAATGGAT+TGG + chr3_3:23013545-23013564 Msa0446580:intron 35.0%
!! AAAAAGTAGGGAATGGATTG+GGG + chr3_3:23013547-23013566 Msa0446580:intron 35.0%
TTAGTTCCACATGGATATGT+AGG + chr3_3:23013649-23013668 Msa0446580:intron 35.0%
!! GGTTTTGTAAACCGAGAAAA+TGG + chr3_3:23013683-23013702 Msa0446580:CDS 35.0%
AGAAACCGTCAAGTTATTAC+AGG - chr3_3:23013761-23013780 None:intergenic 35.0%
AAATGCTCGAGTCTTAAACA+TGG - chr3_3:23014006-23014025 None:intergenic 35.0%
TTAATCTCTCAACTGTGATC+AGG + chr3_3:23014175-23014194 Msa0446580:intron 35.0%
!!! TAATGGTTTTGATGCATCCA+CGG - chr3_3:23014368-23014387 None:intergenic 35.0%
! GATATGATTTGCAACACTTG+TGG + chr3_3:23014399-23014418 Msa0446580:CDS 35.0%
CTTACAAACGGAACTGAATA+TGG - chr3_3:23014475-23014494 None:intergenic 35.0%
AAGATCACACATTCTCTCTT+TGG + chr3_3:23014509-23014528 Msa0446580:intron 35.0%
! ATGTGATTTGCGGTAATTTG+TGG - chr3_3:23014935-23014954 None:intergenic 35.0%
! ATCACTGTCATTTGGCATAA+TGG - chr3_3:23014976-23014995 None:intergenic 35.0%
!! TCTATGGAGGGATGTTTTAA+TGG + chr3_3:23015024-23015043 Msa0446580:intron 35.0%
TGTTGTATGGAACTGAATGT+TGG + chr3_3:23015116-23015135 Msa0446580:intron 35.0%
CAACTTGAAGCATGTTGATA+TGG + chr3_3:23015207-23015226 Msa0446580:intron 35.0%
GTACAGAGTGTATTAGCTAT+TGG - chr3_3:23015252-23015271 None:intergenic 35.0%
AGCAACCAAGTCAGTTAAAT+TGG + chr3_3:23015356-23015375 Msa0446580:CDS 35.0%
AAGCAGGATCTTATAGTTAG+TGG - chr3_3:23015670-23015689 None:intergenic 35.0%
TTGTTTGGCACCATAATTGA+TGG - chr3_3:23015858-23015877 None:intergenic 35.0%
ACAGTAACATAAAGATCACC+AGG - chr3_3:23016110-23016129 None:intergenic 35.0%
AAAAAATGATTGAGGTCGTG+AGG - chr3_3:23016194-23016213 None:intergenic 35.0%
!! TACTGTTTTAAGCATCACTC+AGG + chr3_3:23016284-23016303 Msa0446580:CDS 35.0%
!! GATCTCGATTTTGACAACTA+TGG - chr3_3:23016454-23016473 None:intergenic 35.0%
AGATCTTACCCAAGATCATT+TGG + chr3_3:23016469-23016488 Msa0446580:intron 35.0%
GATCTTACCCAAGATCATTT+GGG + chr3_3:23016470-23016489 Msa0446580:intron 35.0%
TAAATCGTGAGATCGTAACA+AGG + chr3_3:23016506-23016525 Msa0446580:intron 35.0%
AAGAATAGCAAGCATTTAGC+AGG + chr3_3:23016852-23016871 Msa0446580:intron 35.0%
CTGTAGATCATGAGATCATA+CGG - chr3_3:23017152-23017171 None:intergenic 35.0%
AAATCTCCAAACATATCCGA+CGG - chr3_3:23017194-23017213 None:intergenic 35.0%
ATCATTGGAATTGAAAGGGA+TGG + chr3_3:23017229-23017248 Msa0446580:intron 35.0%
TTCAAGAAAGTGAGTTTGTG+AGG + chr3_3:23017599-23017618 Msa0446580:intron 35.0%
AAAGTGAGTTTGTGAGGAAA+AGG + chr3_3:23017605-23017624 Msa0446580:intron 35.0%
AAGTGAGTTTGTGAGGAAAA+GGG + chr3_3:23017606-23017625 Msa0446580:intron 35.0%
! GTTAAAACGTTTATGGTGGA+AGG - chr3_3:23017651-23017670 None:intergenic 35.0%
GGAGAGTCATTAAAATAGTG+GGG - chr3_3:23017700-23017719 None:intergenic 35.0%
GAGGAGAGTCATTAAAATAG+TGG - chr3_3:23017702-23017721 None:intergenic 35.0%
!!! AGTTTCATAATTTTTGGGGC+TGG + chr3_3:23018228-23018247 Msa0446580:intron 35.0%
!! TTATATCCCATGTCGATTTG+AGG + chr3_3:23018287-23018306 Msa0446580:intron 35.0%
! GAGTTTGGTAGTATAAGAGA+AGG + chr3_3:23018509-23018528 Msa0446580:intron 35.0%
! GTTTAGAACTAGCTAGTTGA+AGG + chr3_3:23018563-23018582 Msa0446580:intron 35.0%
AAATGCCAACTGTATACAAC+TGG - chr3_3:23018592-23018611 None:intergenic 35.0%
CAAATTGATACAAGCCATTC+AGG - chr3_3:23018806-23018825 None:intergenic 35.0%
!! TGATGTTTAGGAGTACCATA+AGG - chr3_3:23018945-23018964 None:intergenic 35.0%
!!! GTCTTTTTTCAGGCCATTTT+GGG + chr3_3:23018990-23019009 Msa0446580:intron 35.0%
! GATGTTGTTGTTAAGGTTTG+TGG + chr3_3:23019044-23019063 Msa0446580:intron 35.0%
CACCCCATTTAAACTTTCAT+CGG - chr3_3:23019112-23019131 None:intergenic 35.0%
TTGTTTGTCATCCTCTTAAC+AGG + chr3_3:23019282-23019301 Msa0446580:intron 35.0%
TGTTTGTCATCCTCTTAACA+GGG + chr3_3:23019283-23019302 Msa0446580:intron 35.0%
TCAAATCTAACACTCACACT+GGG - chr3_3:23019368-23019387 None:intergenic 35.0%
ATCAAATCTAACACTCACAC+TGG - chr3_3:23019369-23019388 None:intergenic 35.0%
TTAGTTCCTTTCTGTCAGAA+GGG - chr3_3:23019485-23019504 None:intergenic 35.0%
ATTAGTTCCTTTCTGTCAGA+AGG - chr3_3:23019486-23019505 None:intergenic 35.0%
GCTTAGGAAATTACTTCTGA+TGG + chr3_3:23019531-23019550 Msa0446580:intron 35.0%
! ATTTCCGATTGCTTTGTTGT+TGG + chr3_3:23019598-23019617 Msa0446580:intron 35.0%
TGAACCAACAACAAAGCAAT+CGG - chr3_3:23019605-23019624 None:intergenic 35.0%
!! TGCTTTGTTGTTGGTTCAAA+AGG + chr3_3:23019607-23019626 Msa0446580:intron 35.0%
! AAACTTTTACATGTTCCGAC+GGG - chr3_3:23019759-23019778 None:intergenic 35.0%
! GAAACTTTTACATGTTCCGA+CGG - chr3_3:23019760-23019779 None:intergenic 35.0%
GGAACATGTAAAAGTTTCGA+GGG + chr3_3:23019762-23019781 Msa0446580:intron 35.0%
GAACATGTAAAAGTTTCGAG+GGG + chr3_3:23019763-23019782 Msa0446580:intron 35.0%
AACATGTAAAAGTTTCGAGG+GGG + chr3_3:23019764-23019783 Msa0446580:intron 35.0%
TACAAAACTTCAATAGCAGG+CGG - chr3_3:23020071-23020090 None:intergenic 35.0%
TACATATACCCAAAAGTGGA+GGG - chr3_3:23020129-23020148 None:intergenic 35.0%
TTACATATACCCAAAAGTGG+AGG - chr3_3:23020130-23020149 None:intergenic 35.0%
!! ATATGGGTTGGTAATCTTGG+GGG - chr3_3:23009692-23009711 None:intergenic 40.0%
!! GATATGGGTTGGTAATCTTG+GGG - chr3_3:23009693-23009712 None:intergenic 40.0%
!! GGATATGGGTTGGTAATCTT+GGG - chr3_3:23009694-23009713 None:intergenic 40.0%
!! AGGATATGGGTTGGTAATCT+TGG - chr3_3:23009695-23009714 None:intergenic 40.0%
! ATTTGTTGCGGAGGAGATTA+GGG - chr3_3:23009969-23009988 None:intergenic 40.0%
!! GAGAGTATACGGATTTGTTG+CGG - chr3_3:23009981-23010000 None:intergenic 40.0%
! AGAGAGTGAGAGAGAGTATA+CGG - chr3_3:23009992-23010011 None:intergenic 40.0%
GAGTGTTACAAAGGGGATAT+AGG + chr3_3:23010100-23010119 Msa0446580:CDS 40.0%
CGTCGACACCGATAATAATT+TGG + chr3_3:23010775-23010794 Msa0446580:intron 40.0%
TCACATGTGTTAGTGACATG+TGG + chr3_3:23010821-23010840 Msa0446580:intron 40.0%
CACATGTGTTAGTGACATGT+GGG + chr3_3:23010822-23010841 Msa0446580:intron 40.0%
! CACCTTATACTGATTGCAGT+TGG + chr3_3:23011002-23011021 Msa0446580:intron 40.0%
CTCCAACTGCAATCAGTATA+AGG - chr3_3:23011007-23011026 None:intergenic 40.0%
! ATACTGATTGCAGTTGGAGA+TGG + chr3_3:23011008-23011027 Msa0446580:intron 40.0%
! ATTGAAGAACTGGGTGCTAT+TGG + chr3_3:23011037-23011056 Msa0446580:CDS 40.0%
!! TTGAAGAACTGGGTGCTATT+GGG + chr3_3:23011038-23011057 Msa0446580:CDS 40.0%
GGGAGCAGCAAATACTTATT+TGG + chr3_3:23011058-23011077 Msa0446580:CDS 40.0%
ACTAGATCCATTCATGGATC+AGG + chr3_3:23011086-23011105 Msa0446580:CDS 40.0%
!! TGATTTGGTGACAAAGCAGA+TGG + chr3_3:23011193-23011212 Msa0446580:intron 40.0%
! ATTTTCAGCTCCATTGGCAA+AGG + chr3_3:23011327-23011346 Msa0446580:intron 40.0%
GATTTACGAGGAAATCAGTC+TGG - chr3_3:23011488-23011507 None:intergenic 40.0%
GGCTAAGAGAGCTGTAAAAA+TGG - chr3_3:23011765-23011784 None:intergenic 40.0%
! GGATCATCTTTGTTTGTGTC+AGG - chr3_3:23012044-23012063 None:intergenic 40.0%
!! TGAACTGACTTTTGGTCTCT+TGG + chr3_3:23012273-23012292 Msa0446580:intron 40.0%
!!! ATTGTAGGTTTTGAAGGACG+AGG + chr3_3:23012325-23012344 Msa0446580:intron 40.0%
TGCAACAGTTACGTATTAGG+AGG + chr3_3:23012510-23012529 Msa0446580:intron 40.0%
TAGGAGGCAGTTATGTTTCT+AGG + chr3_3:23012526-23012545 Msa0446580:intron 40.0%
ATATGGTTACAGTACGGCTA+CGG - chr3_3:23013025-23013044 None:intergenic 40.0%
TTTGCAAAACGTACCCGTAT+CGG - chr3_3:23013136-23013155 None:intergenic 40.0%
! TACGGGTACGTTTTGCAAAT+TGG + chr3_3:23013137-23013156 Msa0446580:intron 40.0%
!! TGTCGGCTGACATTTTAATG+GGG + chr3_3:23013219-23013238 Msa0446580:intron 40.0%
AGACCAAGCTCTCTAATTCT+TGG + chr3_3:23013261-23013280 Msa0446580:intron 40.0%
CTTCCAAGAATTAGAGAGCT+TGG - chr3_3:23013267-23013286 None:intergenic 40.0%
CAAGCTCTCTAATTCTTGGA+AGG + chr3_3:23013265-23013284 Msa0446580:intron 40.0%
! GACCCGAGACTCAAAATTTT+TGG + chr3_3:23013292-23013311 Msa0446580:intron 40.0%
!! GAATGGATTGGGGATATGAA+TGG + chr3_3:23013557-23013576 Msa0446580:intron 40.0%
TTCCACATGGATATGTAGGT+TGG + chr3_3:23013653-23013672 Msa0446580:intron 40.0%
CTCGGTTTACAAAACCTTCA+TGG - chr3_3:23013679-23013698 None:intergenic 40.0%
GTAAACCGAGAAAATGGTTC+TGG + chr3_3:23013689-23013708 Msa0446580:CDS 40.0%
! CATCTCCAGAACCATTTTCT+CGG - chr3_3:23013697-23013716 None:intergenic 40.0%
!! TGCAGACTGGCCTAATAAAA+AGG - chr3_3:23013824-23013843 None:intergenic 40.0%
ACTAACTATCCAACTGCATC+AGG + chr3_3:23013932-23013951 Msa0446580:intron 40.0%
TGTTCCGATTAAAGAGGTCA+TGG - chr3_3:23014208-23014227 None:intergenic 40.0%
GACCTCTTTAATCGGAACAT+TGG + chr3_3:23014209-23014228 Msa0446580:CDS 40.0%
CTCTTTAATCGGAACATTGG+CGG + chr3_3:23014212-23014231 Msa0446580:CDS 40.0%
ACAAACGGAACTGAATATGG+TGG - chr3_3:23014472-23014491 None:intergenic 40.0%
GAGAGAATGTGTGATCTTCA+GGG - chr3_3:23014507-23014526 None:intergenic 40.0%
AGAGAGAATGTGTGATCTTC+AGG - chr3_3:23014508-23014527 None:intergenic 40.0%
! AAACCTGTAAGCGCTGTAAA+GGG + chr3_3:23014579-23014598 Msa0446580:CDS 40.0%
! TTTAGGATGGAGACTACATG+TGG + chr3_3:23014746-23014765 Msa0446580:CDS 40.0%
ACTACATGTGGTGCATGTAA+GGG + chr3_3:23014758-23014777 Msa0446580:CDS 40.0%
CTGGCAAAATTGTCAAGGTA+TGG + chr3_3:23014783-23014802 Msa0446580:intron 40.0%
ATGCCAAATGACAGTGATAG+AGG + chr3_3:23014978-23014997 Msa0446580:intron 40.0%
TGCCAAATGACAGTGATAGA+GGG + chr3_3:23014979-23014998 Msa0446580:intron 40.0%
GTAAGCCTTGCATTGTTGTA+TGG + chr3_3:23015103-23015122 Msa0446580:intron 40.0%
CAGTTCCATACAACAATGCA+AGG - chr3_3:23015111-23015130 None:intergenic 40.0%
TTGGACAGTAGAAAGACAAC+AGG + chr3_3:23015135-23015154 Msa0446580:intron 40.0%
TGGACAGTAGAAAGACAACA+GGG + chr3_3:23015136-23015155 Msa0446580:intron 40.0%
AGTTTCTGCAAGTCATGCAA+GGG + chr3_3:23015318-23015337 Msa0446580:CDS 40.0%
!! TTTAACTGACTTGGTTGCTC+TGG - chr3_3:23015355-23015374 None:intergenic 40.0%
GAGCACAATGCAAAGGAAAT+TGG - chr3_3:23015476-23015495 None:intergenic 40.0%
GAGAACAAGCAGTAACAGAA+AGG + chr3_3:23015736-23015755 Msa0446580:intron 40.0%
! TTCGTCCTTTTTCTTCTTGC+AGG + chr3_3:23016212-23016231 Msa0446580:intron 40.0%
TCTGACCTGCAAGAAGAAAA+AGG - chr3_3:23016220-23016239 None:intergenic 40.0%
GAATATCCGATCCTTCTCTA+CGG - chr3_3:23016257-23016276 None:intergenic 40.0%
TCTTGATTCCTTATCCTGTG+CGG + chr3_3:23016329-23016348 Msa0446580:intron 40.0%
! AAGATAATTAGTCTCCGCAC+AGG - chr3_3:23016346-23016365 None:intergenic 40.0%
GAAACGATGCTTAACCATGA+TGG + chr3_3:23016416-23016435 Msa0446580:intron 40.0%
!! ATTTTGACAACTATGGCCCA+CGG - chr3_3:23016447-23016466 None:intergenic 40.0%
!!! GCTTCAAAGCATGTCGTTTT+GGG + chr3_3:23016965-23016984 Msa0446580:intron 40.0%
TGGAATTGAAAGGGATGGTA+TGG + chr3_3:23017234-23017253 Msa0446580:intron 40.0%
GGAATTGAAAGGGATGGTAT+GGG + chr3_3:23017235-23017254 Msa0446580:intron 40.0%
GAATTGAAAGGGATGGTATG+GGG + chr3_3:23017236-23017255 Msa0446580:intron 40.0%
ATGGTATGGGGCAAAGAAAT+GGG + chr3_3:23017248-23017267 Msa0446580:intron 40.0%
AGAATTGGGTATAGGGTTCT+TGG - chr3_3:23017308-23017327 None:intergenic 40.0%
TTGGAGCAGAATTGGGTATA+GGG - chr3_3:23017315-23017334 None:intergenic 40.0%
ATTGGAGCAGAATTGGGTAT+AGG - chr3_3:23017316-23017335 None:intergenic 40.0%
CTAGATCTTGCGAATAACCA+GGG - chr3_3:23017388-23017407 None:intergenic 40.0%
AGTGAGTTTGTGAGGAAAAG+GGG + chr3_3:23017607-23017626 Msa0446580:intron 40.0%
ACACAATGGTTAGGAATGCA+GGG - chr3_3:23017743-23017762 None:intergenic 40.0%
AACACAATGGTTAGGAATGC+AGG - chr3_3:23017744-23017763 None:intergenic 40.0%
TGCATTCCTAACCATTGTGT+TGG + chr3_3:23017743-23017762 Msa0446580:intron 40.0%
TTCCTAACCATTGTGTTGGA+TGG + chr3_3:23017747-23017766 Msa0446580:intron 40.0%
TATCACACCATCCAACACAA+TGG - chr3_3:23017757-23017776 None:intergenic 40.0%
GTTGGATGGTGTGATATCAA+TGG + chr3_3:23017761-23017780 Msa0446580:intron 40.0%
! CACGCAATGCTGGTTATAAA+GGG + chr3_3:23017832-23017851 Msa0446580:intron 40.0%
!! GGCTGGTTTATTTGAGTCAT+TGG + chr3_3:23018245-23018264 Msa0446580:intron 40.0%
GGAATTATGTAAGGGAAGAG+TGG - chr3_3:23018355-23018374 None:intergenic 40.0%
CATTGACCAACATGCTCATT+TGG + chr3_3:23018386-23018405 Msa0446580:intron 40.0%
TGAAGTCCAAATGAGCATGT+TGG - chr3_3:23018395-23018414 None:intergenic 40.0%
AACATGCTCATTTGGACTTC+AGG + chr3_3:23018394-23018413 Msa0446580:intron 40.0%
TGCTATAGCAGATCGATCTA+TGG - chr3_3:23018649-23018668 None:intergenic 40.0%
TGATGTGTAGTGATTGGTAC+TGG + chr3_3:23018862-23018881 Msa0446580:intron 40.0%
ATCCAAACTGTGTGTGAACA+TGG - chr3_3:23018893-23018912 None:intergenic 40.0%
CAGTTGTCTGTGTTTCCTTA+TGG + chr3_3:23018927-23018946 Msa0446580:intron 40.0%
!!! GGTCTTTTTTCAGGCCATTT+TGG + chr3_3:23018989-23019008 Msa0446580:intron 40.0%
!!! TTTTTTCAGGCCATTTTGGG+TGG + chr3_3:23018993-23019012 Msa0446580:intron 40.0%
! TACTGGGGATGTTGTTGTTA+AGG + chr3_3:23019037-23019056 Msa0446580:CDS 40.0%
CGGTTACTAAGACCAAAATG+TGG - chr3_3:23019092-23019111 None:intergenic 40.0%
!! AAGGTGGTTCTGAAACAGAA+AGG + chr3_3:23019172-23019191 Msa0446580:CDS 40.0%
AAACAGTATTTACCGAAGCG+CGG + chr3_3:23019421-23019440 Msa0446580:intron 40.0%
!!! CAGGTTTTTGTCGGTTCAAA+GGG - chr3_3:23019450-23019469 None:intergenic 40.0%
!!! ACAGGTTTTTGTCGGTTCAA+AGG - chr3_3:23019451-23019470 None:intergenic 40.0%
TTGAACCGACAAAAACCTGT+TGG + chr3_3:23019451-23019470 Msa0446580:intron 40.0%
TAGATTTCAACCGACACTGA+AGG + chr3_3:23019728-23019747 Msa0446580:intron 40.0%
CGGAACATGTAAAAGTTTCG+AGG + chr3_3:23019761-23019780 Msa0446580:intron 40.0%
! CGAAGCAGCTTTTCCTTTAT+CGG - chr3_3:23019968-23019987 None:intergenic 40.0%
CGATAAAGGAAAAGCTGCTT+CGG + chr3_3:23019966-23019985 Msa0446580:CDS 40.0%
ACATTTGCAGAGTATGCAGT+TGG + chr3_3:23020002-23020021 Msa0446580:three_prime_UTR 40.0%
CAATCAATTTGTGGCCAATC+AGG + chr3_3:23020035-23020054 Msa0446580:three_prime_UTR 40.0%
!! ATTTTTGCCCCTCCACTTTT+GGG + chr3_3:23020118-23020137 Msa0446580:three_prime_UTR 40.0%
ACATATACCCAAAAGTGGAG+GGG - chr3_3:23020128-23020147 None:intergenic 40.0%
AAGAAGAAGCTTGACGCCAT+TGG - chr3_3:23009935-23009954 None:intergenic 45.0%
TTTGTTGCGGAGGAGATTAG+GGG - chr3_3:23009968-23009987 None:intergenic 45.0%
!! GATTTGTTGCGGAGGAGATT+AGG - chr3_3:23009970-23009989 None:intergenic 45.0%
!! AGTATACGGATTTGTTGCGG+AGG - chr3_3:23009978-23009997 None:intergenic 45.0%
!! TGGTGGTGTTGGTGAATTTC+AGG + chr3_3:23010068-23010087 Msa0446580:intron 45.0%
ACACGTGTAAGTGTCTGACA+CGG - chr3_3:23010853-23010872 None:intergenic 45.0%
TGTCAGACACTTACACGTGT+TGG + chr3_3:23010853-23010872 Msa0446580:intron 45.0%
! TTTCTGACCGAAGGCATGTT+CGG - chr3_3:23010882-23010901 None:intergenic 45.0%
ATGCCTTCGGTCAGAAATGT+CGG + chr3_3:23010885-23010904 Msa0446580:intron 45.0%
! TGACGCATTTTCAGCTCCAT+TGG + chr3_3:23011321-23011340 Msa0446580:intron 45.0%
! AACAAAGGTACGGGTACGTT+AGG + chr3_3:23012620-23012639 Msa0446580:intron 45.0%
GCCGTACTGTAACCATATCA+AGG + chr3_3:23013027-23013046 Msa0446580:intron 45.0%
TTGCAAAACGTACCCGTATC+GGG - chr3_3:23013135-23013154 None:intergenic 45.0%
!! GCTGACATTTTAATGGGGAC+TGG + chr3_3:23013224-23013243 Msa0446580:intron 45.0%
!! AATGGGGACTGGTTATTGGT+TGG + chr3_3:23013235-23013254 Msa0446580:intron 45.0%
! GATATGTAGGTTGGCCATGA+AGG + chr3_3:23013662-23013681 Msa0446580:intron 45.0%
!! CGAGAAAATGGTTCTGGAGA+TGG + chr3_3:23013695-23013714 Msa0446580:CDS 45.0%
!! GAAAATGGTTCTGGAGATGG+TGG + chr3_3:23013698-23013717 Msa0446580:CDS 45.0%
! TGTCTTTTGCCTGATGCAGT+TGG - chr3_3:23013944-23013963 None:intergenic 45.0%
CGCCAATGTTCCGATTAAAG+AGG - chr3_3:23014214-23014233 None:intergenic 45.0%
! TCTTTTATGGAAGCTGTCCG+TGG + chr3_3:23014348-23014367 Msa0446580:CDS 45.0%
! GGGCGCTTAGTTCTTACAAA+CGG - chr3_3:23014487-23014506 None:intergenic 45.0%
CTCTTTGGCTGAACAATTGC+AGG + chr3_3:23014524-23014543 Msa0446580:intron 45.0%
TTTGGCTGAACAATTGCAGG+TGG + chr3_3:23014527-23014546 Msa0446580:intron 45.0%
TTGGCTGAACAATTGCAGGT+GGG + chr3_3:23014528-23014547 Msa0446580:intron 45.0%
TTACAGCGCTTACAGGTTTC+AGG - chr3_3:23014578-23014597 None:intergenic 45.0%
! GAAACCTGTAAGCGCTGTAA+AGG + chr3_3:23014578-23014597 Msa0446580:CDS 45.0%
CTGTACAAGCTGGCGTATTT+AGG + chr3_3:23014729-23014748 Msa0446580:CDS 45.0%
ACAAGCTGGCGTATTTAGGA+TGG + chr3_3:23014733-23014752 Msa0446580:CDS 45.0%
GACTACATGTGGTGCATGTA+AGG + chr3_3:23014757-23014776 Msa0446580:CDS 45.0%
GGGATCTGGCAAAATTGTCA+AGG + chr3_3:23014778-23014797 Msa0446580:CDS 45.0%
GCCAAATGACAGTGATAGAG+GGG + chr3_3:23014980-23014999 Msa0446580:intron 45.0%
CCAAATGACAGTGATAGAGG+GGG + chr3_3:23014981-23015000 Msa0446580:intron 45.0%
CATGTTGATATGGCTATGCC+TGG + chr3_3:23015217-23015236 Msa0446580:intron 45.0%
AGCTATTGGTACGAAAGACC+AGG - chr3_3:23015238-23015257 None:intergenic 45.0%
GAGTTTCTGCAAGTCATGCA+AGG + chr3_3:23015317-23015336 Msa0446580:intron 45.0%
TTCCTTTGCATTGTGCTCAC+TGG + chr3_3:23015478-23015497 Msa0446580:intron 45.0%
!!! GAGTTTTGGAGAAAGCTCGT+TGG + chr3_3:23015943-23015962 Msa0446580:intron 45.0%
TGTCTTCCGTAGAGAAGGAT+CGG + chr3_3:23016248-23016267 Msa0446580:CDS 45.0%
! ATTAGTCTCCGCACAGGATA+AGG - chr3_3:23016340-23016359 None:intergenic 45.0%
! TAAGCATCGTTTCGCGTTCA+AGG - chr3_3:23016409-23016428 None:intergenic 45.0%
! TAACCATGATGGTGTAACCG+TGG + chr3_3:23016427-23016446 Msa0446580:intron 45.0%
! AACCATGATGGTGTAACCGT+GGG + chr3_3:23016428-23016447 Msa0446580:intron 45.0%
!! CGCTTCAAAGCATGTCGTTT+TGG + chr3_3:23016964-23016983 Msa0446580:intron 45.0%
ACAAAATCTTCCTGCGAACC+AGG + chr3_3:23016990-23017009 Msa0446580:intron 45.0%
CACAGGTCATATGGATCACA+AGG + chr3_3:23017017-23017036 Msa0446580:intron 45.0%
GCAAAAAAAGTTGGAGAGGC+CGG - chr3_3:23017091-23017110 None:intergenic 45.0%
CGGTGCAAAAAAAGTTGGAG+AGG - chr3_3:23017095-23017114 None:intergenic 45.0%
GATGGTATGGGGCAAAGAAA+TGG + chr3_3:23017247-23017266 Msa0446580:intron 45.0%
TGGTATGGGGCAAAGAAATG+GGG + chr3_3:23017249-23017268 Msa0446580:intron 45.0%
GGCAAAGAAATGGGGAAGAT+GGG + chr3_3:23017257-23017276 Msa0446580:intron 45.0%
AAAGAAATGGGGAAGATGGG+AGG + chr3_3:23017260-23017279 Msa0446580:intron 45.0%
TCCTGCATTGGAGCAGAATT+GGG - chr3_3:23017322-23017341 None:intergenic 45.0%
CCTAGATCTTGCGAATAACC+AGG - chr3_3:23017389-23017408 None:intergenic 45.0%
CCTGGTTATTCGCAAGATCT+AGG + chr3_3:23017386-23017405 Msa0446580:intron 45.0%
ACAATGGTTAGGAATGCAGG+GGG - chr3_3:23017741-23017760 None:intergenic 45.0%
CACAATGGTTAGGAATGCAG+GGG - chr3_3:23017742-23017761 None:intergenic 45.0%
CACCATCCAACACAATGGTT+AGG - chr3_3:23017752-23017771 None:intergenic 45.0%
GGATGGTGTGATATCAATGG+AGG + chr3_3:23017764-23017783 Msa0446580:intron 45.0%
GAGGAAACTGACACATGACA+TGG + chr3_3:23017783-23017802 Msa0446580:intron 45.0%
GAAACTGACACATGACATGG+TGG + chr3_3:23017786-23017805 Msa0446580:intron 45.0%
CCTTTATAACCAGCATTGCG+TGG - chr3_3:23017834-23017853 None:intergenic 45.0%
! CCACGCAATGCTGGTTATAA+AGG + chr3_3:23017831-23017850 Msa0446580:intron 45.0%
! TGTCCCATTGTGGAAAGTGT+CGG + chr3_3:23017898-23017917 Msa0446580:intron 45.0%
!! CGAGCACTGATGGTTACTTA+TGG + chr3_3:23017966-23017985 Msa0446580:intron 45.0%
TTGGCACCTCAAATCGACAT+GGG - chr3_3:23018296-23018315 None:intergenic 45.0%
TTTGGCACCTCAAATCGACA+TGG - chr3_3:23018297-23018316 None:intergenic 45.0%
ATGTAAGGGAAGAGTGGTGA+AGG - chr3_3:23018349-23018368 None:intergenic 45.0%
GGATGCCAGTTGTATACAGT+TGG + chr3_3:23018584-23018603 Msa0446580:intron 45.0%
CTCCATGTTCACACACAGTT+TGG + chr3_3:23018888-23018907 Msa0446580:intron 45.0%
CTGAATGGTTCCACCCAAAA+TGG - chr3_3:23019006-23019025 None:intergenic 45.0%
!! CATTTTGGGTGGAACCATTC+AGG + chr3_3:23019004-23019023 Msa0446580:CDS 45.0%
AGTAAGAGTTGGGACCTGAA+TGG - chr3_3:23019021-23019040 None:intergenic 45.0%
ATTCAGGTCCCAACTCTTAC+TGG + chr3_3:23019020-23019039 Msa0446580:CDS 45.0%
TTCAGGTCCCAACTCTTACT+GGG + chr3_3:23019021-23019040 Msa0446580:CDS 45.0%
CAACATCCCCAGTAAGAGTT+GGG - chr3_3:23019031-23019050 None:intergenic 45.0%
ACAACATCCCCAGTAAGAGT+TGG - chr3_3:23019032-23019051 None:intergenic 45.0%
! TGGTCTTGATCCCTGTTAAG+AGG - chr3_3:23019296-23019315 None:intergenic 45.0%
! AGAAGGGACGATTTTCCAAC+AGG - chr3_3:23019469-23019488 None:intergenic 45.0%
AATCGTCCCTTCTGACAGAA+AGG + chr3_3:23019476-23019495 Msa0446580:intron 45.0%
AAGCACTCTTCCTCCAGAAA+TGG - chr3_3:23019515-23019534 None:intergenic 45.0%
!! TTTCTGGAGGAAGAGTGCTT+AGG + chr3_3:23019515-23019534 Msa0446580:intron 45.0%
TTTCCTACAGCCTTGAACGT+CGG + chr3_3:23019694-23019713 Msa0446580:intron 45.0%
TAATCCATCTCCGACGTTCA+AGG - chr3_3:23019707-23019726 None:intergenic 45.0%
TAAAAGTTTCGAGGGGGTCT+GGG + chr3_3:23019770-23019789 Msa0446580:intron 45.0%
CTGTCTATCTGTCAGGTTTC+TGG - chr3_3:23019899-23019918 None:intergenic 45.0%
GAAACCTGACAGATAGACAG+CGG + chr3_3:23019899-23019918 Msa0446580:intron 45.0%
AAACCTGACAGATAGACAGC+GGG + chr3_3:23019900-23019919 Msa0446580:CDS 45.0%
AAAACTTCAATAGCAGGCGG+CGG - chr3_3:23020068-23020087 None:intergenic 45.0%
! CATTTTTGCCCCTCCACTTT+TGG + chr3_3:23020117-23020136 Msa0446580:three_prime_UTR 45.0%
ATACTGCAACAGGTGCATGA+AGG - chr3_3:23020215-23020234 None:intergenic 45.0%
ACAGACTAGGATACTGCAAC+AGG - chr3_3:23020225-23020244 None:intergenic 45.0%
!! ATTAATTAAATAATTACAAT+GGG - chr3_3:23013321-23013340 None:intergenic 5.0%
!! AATTAATTAAATAATTACAA+TGG - chr3_3:23013322-23013341 None:intergenic 5.0%
!!! ATAATTTTTTTTTAGAATTT+TGG + chr3_3:23015394-23015413 Msa0446580:intron 5.0%
!!! TAATTTTTTTTTAGAATTTT+GGG + chr3_3:23015395-23015414 Msa0446580:intron 5.0%
CCATTGGAGCGAACCATTTG+GGG - chr3_3:23009919-23009938 None:intergenic 50.0%
GCCATTGGAGCGAACCATTT+GGG - chr3_3:23009920-23009939 None:intergenic 50.0%
TTGGACACCGAACATGCCTT+CGG + chr3_3:23010872-23010891 Msa0446580:intron 50.0%
GGGGCAACTAGATCCATTCA+TGG + chr3_3:23011080-23011099 Msa0446580:CDS 50.0%
GGAGCTGAAAATGCGTCAAG+CGG - chr3_3:23011319-23011338 None:intergenic 50.0%
TTCTAGGCAGCTGTGTTGCA+TGG + chr3_3:23012542-23012561 Msa0446580:intron 50.0%
TCTAGGCAGCTGTGTTGCAT+GGG + chr3_3:23012543-23012562 Msa0446580:intron 50.0%
GTTACAGTACGGCTACGGTA+CGG - chr3_3:23013020-23013039 None:intergenic 50.0%
!! AACTGCCTAGCTCTGAAGCA+CGG - chr3_3:23013168-23013187 None:intergenic 50.0%
GGCCAACCTACATATCCATG+TGG - chr3_3:23013658-23013677 None:intergenic 50.0%
! TAATCGGAACATTGGCGGAC+AGG + chr3_3:23014217-23014236 Msa0446580:CDS 50.0%
TGAACAATTGCAGGTGGGAG+TGG + chr3_3:23014533-23014552 Msa0446580:intron 50.0%
GAACAATTGCAGGTGGGAGT+GGG + chr3_3:23014534-23014553 Msa0446580:intron 50.0%
AACAATTGCAGGTGGGAGTG+GGG + chr3_3:23014535-23014554 Msa0446580:intron 50.0%
! GTTTCAGGTCTTGTACCAGG+AGG - chr3_3:23014563-23014582 None:intergenic 50.0%
! CAGGTTTCAGGTCTTGTACC+AGG - chr3_3:23014566-23014585 None:intergenic 50.0%
TGACCCTTTACAGCGCTTAC+AGG - chr3_3:23014585-23014604 None:intergenic 50.0%
! TGTAAGCGCTGTAAAGGGTC+AGG + chr3_3:23014584-23014603 Msa0446580:CDS 50.0%
CAGCTTGTACAGATGTCTGC+CGG - chr3_3:23014721-23014740 None:intergenic 50.0%
TGTGGTGCATGTAAGGGATC+TGG + chr3_3:23014764-23014783 Msa0446580:CDS 50.0%
CCCCCTCTATCACTGTCATT+TGG - chr3_3:23014984-23015003 None:intergenic 50.0%
! CAAGTCATGCAAGGGTGCAA+AGG + chr3_3:23015326-23015345 Msa0446580:CDS 50.0%
GACCAGTGAGCACAATGCAA+AGG - chr3_3:23015483-23015502 None:intergenic 50.0%
!! GTGGATTGGCTCACATCAGT+GGG - chr3_3:23015562-23015581 None:intergenic 50.0%
ATCACCAGGTCGATCTCCTT+CGG - chr3_3:23016096-23016115 None:intergenic 50.0%
GATCCTGTCTTCCGTAGAGA+AGG + chr3_3:23016243-23016262 Msa0446580:CDS 50.0%
GATCCTTCTCTACGGAAGAC+AGG - chr3_3:23016249-23016268 None:intergenic 50.0%
! CCATATGACCTGTGTTGACC+TGG - chr3_3:23017011-23017030 None:intergenic 50.0%
CCAGGTCAACACAGGTCATA+TGG + chr3_3:23017008-23017027 Msa0446580:intron 50.0%
AGATCGCAAGATCGTGGAAG+CGG - chr3_3:23017057-23017076 None:intergenic 50.0%
AGAGGTAGATCGCAAGATCG+TGG - chr3_3:23017063-23017082 None:intergenic 50.0%
CAGCGCGGTGCAAAAAAAGT+TGG - chr3_3:23017100-23017119 None:intergenic 50.0%
!!! CAACTTTTTTTGCACCGCGC+TGG + chr3_3:23017098-23017117 Msa0446580:intron 50.0%
ACCATGCCGTCGGATATGTT+TGG + chr3_3:23017185-23017204 Msa0446580:intron 50.0%
TCCAAACATATCCGACGGCA+TGG - chr3_3:23017189-23017208 None:intergenic 50.0%
GGGCAAAGAAATGGGGAAGA+TGG + chr3_3:23017256-23017275 Msa0446580:intron 50.0%
ACCCAATTCTGCTCCAATGC+AGG + chr3_3:23017318-23017337 Msa0446580:intron 50.0%
CTCCTGCATTGGAGCAGAAT+TGG - chr3_3:23017323-23017342 None:intergenic 50.0%
! TCTTAGTGCTGCTCCTGCAT+TGG - chr3_3:23017334-23017353 None:intergenic 50.0%
GCAGGAGCAGCACTAAGAAT+AGG + chr3_3:23017336-23017355 Msa0446580:intron 50.0%
! ACACATGACATGGTGGAGAG+TGG + chr3_3:23017793-23017812 Msa0446580:intron 50.0%
!! TGGTTATAAAGGGTGCTGCG+AGG + chr3_3:23017842-23017861 Msa0446580:intron 50.0%
!! TTATAAAGGGTGCTGCGAGG+TGG + chr3_3:23017845-23017864 Msa0446580:intron 50.0%
!! GTCCCATTGTGGAAAGTGTC+GGG + chr3_3:23017899-23017918 Msa0446580:intron 50.0%
!! TCCCATTGTGGAAAGTGTCG+GGG + chr3_3:23017900-23017919 Msa0446580:intron 50.0%
GGACCACTTTGTGGCAACAA+TGG + chr3_3:23017930-23017949 Msa0446580:intron 50.0%
CCACCATTGTTGCCACAAAG+TGG - chr3_3:23017936-23017955 None:intergenic 50.0%
CCACTTTGTGGCAACAATGG+TGG + chr3_3:23017933-23017952 Msa0446580:intron 50.0%
CTTTGTGGCAACAATGGTGG+TGG + chr3_3:23017936-23017955 Msa0446580:intron 50.0%
TCAGGTCCCAACTCTTACTG+GGG + chr3_3:23019022-23019041 Msa0446580:CDS 50.0%
!! AATGGGGTGTCTTGTTTCGC+AGG + chr3_3:23019123-23019142 Msa0446580:intron 50.0%
TTCTGACCGTGTTGTGTTCC+AGG - chr3_3:23019154-23019173 None:intergenic 50.0%
TGGAACACAACACGGTCAGA+AGG + chr3_3:23019153-23019172 Msa0446580:CDS 50.0%
AACACAACACGGTCAGAAGG+TGG + chr3_3:23019156-23019175 Msa0446580:CDS 50.0%
ACGGGCATTTCCTTCAGTGT+CGG - chr3_3:23019741-23019760 None:intergenic 50.0%
ACACTGAAGGAAATGCCCGT+CGG + chr3_3:23019741-23019760 Msa0446580:intron 50.0%
GTAAAAGTTTCGAGGGGGTC+TGG + chr3_3:23019769-23019788 Msa0446580:intron 50.0%
ATTCCCGCTGTCTATCTGTC+AGG - chr3_3:23019906-23019925 None:intergenic 50.0%
CCCCAAATGGTTCGCTCCAA+TGG + chr3_3:23009916-23009935 Msa0446580:exon 55.0%
CGCCATTGGAGCGAACCATT+TGG - chr3_3:23009921-23009940 None:intergenic 55.0%
! GCACCGACATTTCTGACCGA+AGG - chr3_3:23010891-23010910 None:intergenic 55.0%
CATACGAGTACCAGTACCCG+CGG + chr3_3:23013105-23013124 Msa0446580:intron 55.0%
AGTACCCGTGCTTCAGAGCT+AGG + chr3_3:23013160-23013179 Msa0446580:intron 55.0%
!! ACTGCCTAGCTCTGAAGCAC+GGG - chr3_3:23013167-23013186 None:intergenic 55.0%
!! GGTTCTGGAGATGGTGGCTT+TGG + chr3_3:23013704-23013723 Msa0446580:CDS 55.0%
!! GATGGTGGCTTTGGTCCCTT+TGG + chr3_3:23013713-23013732 Msa0446580:CDS 55.0%
! CATTGGCGGACAGGATGTCA+AGG + chr3_3:23014226-23014245 Msa0446580:CDS 55.0%
CGGCAGACATCTGTACAAGC+TGG + chr3_3:23014719-23014738 Msa0446580:intron 55.0%
!! GGTGGATTGGCTCACATCAG+TGG - chr3_3:23015563-23015582 None:intergenic 55.0%
TCACCAGGTCGATCTCCTTC+GGG - chr3_3:23016095-23016114 None:intergenic 55.0%
!!! TTTTTTGCACCGCGCTGGCA+CGG + chr3_3:23017103-23017122 Msa0446580:intron 55.0%
GCGCTTAACAACCATGCCGT+CGG + chr3_3:23017175-23017194 Msa0446580:intron 55.0%
AGGGGGTTACACTGGAAGGA+GGG - chr3_3:23017724-23017743 None:intergenic 55.0%
ATGCAGGGGGTTACACTGGA+AGG - chr3_3:23017728-23017747 None:intergenic 55.0%
AGGAATGCAGGGGGTTACAC+TGG - chr3_3:23017732-23017751 None:intergenic 55.0%
! ATGGTGGAGAGTGGAGACCA+TGG + chr3_3:23017802-23017821 Msa0446580:intron 55.0%
TGGAGAGTGGAGACCATGGT+TGG + chr3_3:23017806-23017825 Msa0446580:intron 55.0%
GCATTGCGTGGTACCAACCA+TGG - chr3_3:23017822-23017841 None:intergenic 55.0%
! TGGTTGGTACCACGCAATGC+TGG + chr3_3:23017822-23017841 Msa0446580:intron 55.0%
GTGGTGACAGTGTCCCATTG+TGG + chr3_3:23017888-23017907 Msa0446580:intron 55.0%
CCCCCGACACTTTCCACAAT+GGG - chr3_3:23017904-23017923 None:intergenic 55.0%
!! CCCATTGTGGAAAGTGTCGG+GGG + chr3_3:23017901-23017920 Msa0446580:intron 55.0%
ACCCCCGACACTTTCCACAA+TGG - chr3_3:23017905-23017924 None:intergenic 55.0%
!! ATTGTGGAAAGTGTCGGGGG+TGG + chr3_3:23017904-23017923 Msa0446580:intron 55.0%
!! TGTGGCAACAATGGTGGTGG+AGG + chr3_3:23017939-23017958 Msa0446580:intron 55.0%
!! GTGGCAACAATGGTGGTGGA+GGG + chr3_3:23017940-23017959 Msa0446580:intron 55.0%
!! TGGAGGGTATCGAGCACTGA+TGG + chr3_3:23017956-23017975 Msa0446580:intron 55.0%
GTGCGTCCTGGAACACAACA+CGG + chr3_3:23019145-23019164 Msa0446580:CDS 55.0%
TTCAAAGGGCTTCCGCGCTT+CGG - chr3_3:23019436-23019455 None:intergenic 55.0%
TCTCCGACGTTCAAGGCTGT+AGG - chr3_3:23019700-23019719 None:intergenic 55.0%
ACAGCCTTGAACGTCGGAGA+TGG + chr3_3:23019700-23019719 Msa0446580:intron 55.0%
GGAAAAGCTGCTTCGGCTTC+TGG + chr3_3:23019973-23019992 Msa0446580:CDS 55.0%
GCAGCTGTGTTGCATGGGTG+CGG + chr3_3:23012548-23012567 Msa0446580:intron 60.0%
CAGCTGTGTTGCATGGGTGC+GGG + chr3_3:23012549-23012568 Msa0446580:intron 60.0%
GTGTTGCATGGGTGCGGGTA+CGG + chr3_3:23012554-23012573 Msa0446580:intron 60.0%
GTACGGCGGTGGTACTCTGA+GGG - chr3_3:23013003-23013022 None:intergenic 60.0%
ACAGTACGGCTACGGTACGG+CGG - chr3_3:23013017-23013036 None:intergenic 60.0%
!! CGCGGGTACTGGTACTCGTA+TGG - chr3_3:23013107-23013126 None:intergenic 60.0%
! TACCCGCGGAGTACCCGATA+CGG + chr3_3:23013119-23013138 Msa0446580:intron 60.0%
TACCCGTATCGGGTACTCCG+CGG - chr3_3:23013125-23013144 None:intergenic 60.0%
!! GGTGGCTTTGGTCCCTTTGG+AGG + chr3_3:23013716-23013735 Msa0446580:CDS 60.0%
! GGCTTTGGTCCCTTTGGAGG+CGG + chr3_3:23013719-23013738 Msa0446580:CDS 60.0%
! TTTGGTCCCTTTGGAGGCGG+TGG + chr3_3:23013722-23013741 Msa0446580:CDS 60.0%
CCAAAGCCACCGCCTCCAAA+GGG - chr3_3:23013731-23013750 None:intergenic 60.0%
TCCAAAGCCACCGCCTCCAA+AGG - chr3_3:23013732-23013751 None:intergenic 60.0%
GCGCTGTAAAGGGTCAGGAG+TGG + chr3_3:23014589-23014608 Msa0446580:CDS 60.0%
! AGTGGTGGTGCAGATCCCGA+AGG + chr3_3:23016077-23016096 Msa0446580:CDS 60.0%
GATCCCGAAGGAGATCGACC+TGG + chr3_3:23016089-23016108 Msa0446580:CDS 60.0%
GGCCCACGGTTACACCATCA+TGG - chr3_3:23016433-23016452 None:intergenic 60.0%
! CCTGTGTTGACCTGGTTCGC+AGG - chr3_3:23017003-23017022 None:intergenic 60.0%
CCTGCGAACCAGGTCAACAC+AGG + chr3_3:23017000-23017019 Msa0446580:intron 60.0%
TGCGATCTACCTCTGCACGC+CGG + chr3_3:23017069-23017088 Msa0446580:intron 60.0%
GGGTTACACTGGAAGGAGGG+AGG - chr3_3:23017721-23017740 None:intergenic 60.0%
CAGGGGGTTACACTGGAAGG+AGG - chr3_3:23017725-23017744 None:intergenic 60.0%
!! TAAAGGGTGCTGCGAGGTGG+AGG + chr3_3:23017848-23017867 Msa0446580:intron 60.0%
!! AAAGGGTGCTGCGAGGTGGA+GGG + chr3_3:23017849-23017868 Msa0446580:intron 60.0%
!! TGGAAAGTGTCGGGGGTGGA+GGG + chr3_3:23017908-23017927 Msa0446580:intron 60.0%
CTTGTTTCGCAGGTGCGTCC+TGG + chr3_3:23019133-23019152 Msa0446580:intron 60.0%
ATGGGTGCGGGTACGGTACC+CGG + chr3_3:23012561-23012580 Msa0446580:intron 65.0%
TGCGGGTACGGTACCCGGTA+CGG + chr3_3:23012566-23012585 Msa0446580:intron 65.0%
TACGGTACCCGGTACGGGTG+CGG + chr3_3:23012572-23012591 Msa0446580:intron 65.0%
ACGGGTGCGGGTACGGGATA+CGG + chr3_3:23012585-23012604 Msa0446580:intron 65.0%
GGTACGGCGGTGGTACTCTG+AGG - chr3_3:23013004-23013023 None:intergenic 65.0%
ATCGGGTACTCCGCGGGTAC+TGG - chr3_3:23013118-23013137 None:intergenic 65.0%
! ACCCGCGGAGTACCCGATAC+GGG + chr3_3:23013120-23013139 Msa0446580:intron 65.0%
ACCCGTATCGGGTACTCCGC+GGG - chr3_3:23013124-23013143 None:intergenic 65.0%
! CCCTTTGGAGGCGGTGGCTT+TGG + chr3_3:23013728-23013747 Msa0446580:CDS 65.0%
CTCCTTCAACCGTGCCAGCG+CGG - chr3_3:23017115-23017134 None:intergenic 65.0%
AGGTGGAGGGTGGCAAGCAG+TGG + chr3_3:23017862-23017881 Msa0446580:intron 65.0%
GGGTGGCAAGCAGTGGTGAG+TGG + chr3_3:23017869-23017888 Msa0446580:intron 65.0%
!! GTGGAAAGTGTCGGGGGTGG+AGG + chr3_3:23017907-23017926 Msa0446580:intron 65.0%
!! GGAAAGTGTCGGGGGTGGAG+GGG + chr3_3:23017909-23017928 Msa0446580:intron 65.0%
GGGTGGAGGGGACCACTTTG+TGG + chr3_3:23017921-23017940 Msa0446580:intron 65.0%
GCGGCGGCTTCTTGCCTGAT+TGG - chr3_3:23020052-23020071 None:intergenic 65.0%
GCGGGTACGGTACCCGGTAC+GGG + chr3_3:23012567-23012586 Msa0446580:intron 70.0%
ACGGTACCCGGTACGGGTGC+GGG + chr3_3:23012573-23012592 Msa0446580:intron 70.0%
ACCCGGTACGGGTGCGGGTA+CGG + chr3_3:23012578-23012597 Msa0446580:intron 70.0%
TCCCGTACCCGCACCCGTAC+CGG - chr3_3:23012583-23012602 None:intergenic 70.0%
GTACGGCTACGGTACGGCGG+TGG - chr3_3:23013014-23013033 None:intergenic 70.0%
GGTGGGAGTGGGGTTCCTCC+TGG + chr3_3:23014545-23014564 Msa0446580:intron 70.0%
TTGGAGAGGCCGGCGTGCAG+AGG - chr3_3:23017081-23017100 None:intergenic 70.0%
! CACCGCGCTGGCACGGTTGA+AGG + chr3_3:23017110-23017129 Msa0446580:intron 70.0%
CCCGTACCCGCACCCGTACC+GGG - chr3_3:23012582-23012601 None:intergenic 75.0%
CCCGGTACGGGTGCGGGTAC+GGG + chr3_3:23012579-23012598 Msa0446580:intron 75.0%
! GGGTGCTGCGAGGTGGAGGG+TGG + chr3_3:23017852-23017871 Msa0446580:intron 75.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 23009678 23020373 23009678 ID=Msa0446580;Name=Msa0446580
chr3_3 mRNA 23009678 23020373 23009678 ID=Msa0446580-mRNA-1;Parent=Msa0446580;Name=Msa0446580-mRNA-1;_AED=0.10;_eAED=0.10;_QI=244|0.93|1|1|1|1|17|374|416
chr3_3 exon 23009678 23009990 23009678 ID=Msa0446580-mRNA-1:exon:4619;Parent=Msa0446580-mRNA-1
chr3_3 exon 23010090 23010183 23010090 ID=Msa0446580-mRNA-1:exon:4620;Parent=Msa0446580-mRNA-1
chr3_3 exon 23011021 23011107 23011021 ID=Msa0446580-mRNA-1:exon:4621;Parent=Msa0446580-mRNA-1
chr3_3 exon 23011335 23011417 23011335 ID=Msa0446580-mRNA-1:exon:4622;Parent=Msa0446580-mRNA-1
chr3_3 exon 23012332 23012370 23012332 ID=Msa0446580-mRNA-1:exon:4623;Parent=Msa0446580-mRNA-1
chr3_3 exon 23013671 23013760 23013671 ID=Msa0446580-mRNA-1:exon:4624;Parent=Msa0446580-mRNA-1
chr3_3 exon 23014197 23014247 23014197 ID=Msa0446580-mRNA-1:exon:4625;Parent=Msa0446580-mRNA-1
chr3_3 exon 23014333 23014420 23014333 ID=Msa0446580-mRNA-1:exon:4626;Parent=Msa0446580-mRNA-1
chr3_3 exon 23014546 23014610 23014546 ID=Msa0446580-mRNA-1:exon:4627;Parent=Msa0446580-mRNA-1
chr3_3 exon 23014725 23014799 23014725 ID=Msa0446580-mRNA-1:exon:4628;Parent=Msa0446580-mRNA-1
chr3_3 exon 23015318 23015390 23015318 ID=Msa0446580-mRNA-1:exon:4629;Parent=Msa0446580-mRNA-1
chr3_3 exon 23016042 23016133 23016042 ID=Msa0446580-mRNA-1:exon:4630;Parent=Msa0446580-mRNA-1
chr3_3 exon 23016234 23016305 23016234 ID=Msa0446580-mRNA-1:exon:4631;Parent=Msa0446580-mRNA-1
chr3_3 exon 23019002 23019058 23019002 ID=Msa0446580-mRNA-1:exon:4632;Parent=Msa0446580-mRNA-1
chr3_3 exon 23019145 23019193 23019145 ID=Msa0446580-mRNA-1:exon:4633;Parent=Msa0446580-mRNA-1
chr3_3 exon 23019304 23019370 23019304 ID=Msa0446580-mRNA-1:exon:4634;Parent=Msa0446580-mRNA-1
chr3_3 exon 23019900 23020373 23019900 ID=Msa0446580-mRNA-1:exon:4635;Parent=Msa0446580-mRNA-1
chr3_3 five_prime_UTR 23009678 23009921 23009678 ID=Msa0446580-mRNA-1:five_prime_utr;Parent=Msa0446580-mRNA-1
chr3_3 CDS 23009922 23009990 23009922 ID=Msa0446580-mRNA-1:cds;Parent=Msa0446580-mRNA-1
chr3_3 CDS 23010090 23010183 23010090 ID=Msa0446580-mRNA-1:cds;Parent=Msa0446580-mRNA-1
chr3_3 CDS 23011021 23011107 23011021 ID=Msa0446580-mRNA-1:cds;Parent=Msa0446580-mRNA-1
chr3_3 CDS 23011335 23011417 23011335 ID=Msa0446580-mRNA-1:cds;Parent=Msa0446580-mRNA-1
chr3_3 CDS 23012332 23012370 23012332 ID=Msa0446580-mRNA-1:cds;Parent=Msa0446580-mRNA-1
chr3_3 CDS 23013671 23013760 23013671 ID=Msa0446580-mRNA-1:cds;Parent=Msa0446580-mRNA-1
chr3_3 CDS 23014197 23014247 23014197 ID=Msa0446580-mRNA-1:cds;Parent=Msa0446580-mRNA-1
chr3_3 CDS 23014333 23014420 23014333 ID=Msa0446580-mRNA-1:cds;Parent=Msa0446580-mRNA-1
chr3_3 CDS 23014546 23014610 23014546 ID=Msa0446580-mRNA-1:cds;Parent=Msa0446580-mRNA-1
chr3_3 CDS 23014725 23014799 23014725 ID=Msa0446580-mRNA-1:cds;Parent=Msa0446580-mRNA-1
chr3_3 CDS 23015318 23015390 23015318 ID=Msa0446580-mRNA-1:cds;Parent=Msa0446580-mRNA-1
chr3_3 CDS 23016042 23016133 23016042 ID=Msa0446580-mRNA-1:cds;Parent=Msa0446580-mRNA-1
chr3_3 CDS 23016234 23016305 23016234 ID=Msa0446580-mRNA-1:cds;Parent=Msa0446580-mRNA-1
chr3_3 CDS 23019002 23019058 23019002 ID=Msa0446580-mRNA-1:cds;Parent=Msa0446580-mRNA-1
chr3_3 CDS 23019145 23019193 23019145 ID=Msa0446580-mRNA-1:cds;Parent=Msa0446580-mRNA-1
chr3_3 CDS 23019304 23019370 23019304 ID=Msa0446580-mRNA-1:cds;Parent=Msa0446580-mRNA-1
chr3_3 CDS 23019900 23019999 23019900 ID=Msa0446580-mRNA-1:cds;Parent=Msa0446580-mRNA-1
chr3_3 three_prime_UTR 23020000 23020373 23020000 ID=Msa0446580-mRNA-1:three_prime_utr;Parent=Msa0446580-mRNA-1
Gene Sequence

>Msa0446580

ATGGTTCGCTCCAATGGCGTCAAGCTTCTTCTTCGTTCTCTCTCCCCTAATCTCCTCCGCAACAAATCCGTATATGAAGGAGTGTTACAAAGGGGATATAGGACATTGAATTCAGGATTATGCAATCGTTCTTCCAAAGTTACTGGAAATTATTTTTACAATGTTGGAGATGGTGTTAAATTGAAGAACTGGGTGCTATTGGGAGCAGCAAATACTTATTTGGGGGCAACTAGATCCATTCATGGATCAGCTCCATTGGCAAAGGACTTTTATGATGTTCTTGGAGTCAGTAAGAATGCAAGTTCTTCTGAAATAAAGAAAGCATACTATGGGGTTTTGAAGGACGAGGAAAAACGTCAAGAGTATGATCAGGTTGGCCATGAAGGTTTTGTAAACCGAGAAAATGGTTCTGGAGATGGTGGCTTTGGTCCCTTTGGAGGCGGTGGCTTTGGATTTAATCCTGATATTTTCCATGACCTCTTTAATCGGAACATTGGCGGACAGGATGTCAAGACTTTTGTTGAACTTTCTTTTATGGAAGCTGTCCGTGGATGCATCAAAACCATTACATTTCAAACAGATATGATTTGCAACACTTGTGGTGGGAGTGGGGTTCCTCCTGGTACAAGACCTGAAACCTGTAAGCGCTGTAAAGGGTCAGGAGTGACATCTGTACAAGCTGGCGTATTTAGGATGGAGACTACATGTGGTGCATGTAAGGGATCTGGCAAAATTGTCAAGAGTTTCTGCAAGTCATGCAAGGGTGCAAAGGTTACCAGAGCAACCAAGTCAGTTAAATTGGATATTATGGCTGGGATTGACAACAATGAAACCATTAAGGTTTACAAAAGTGGTGGTGCAGATCCCGAAGGAGATCGACCTGGTGATCTTTATGTTACTGTCAAGGTCAGAGAAGATCCTGTCTTCCGTAGAGAAGGATCGGATATTCATGTAGATACTGTTTTAAGCATCACTCAGGCCATTTTGGGTGGAACCATTCAGGTCCCAACTCTTACTGGGGATGTTGTTGTTAAGGTGCGTCCTGGAACACAACACGGTCAGAAGGTGGTTCTGAAACAGAAAGGGATCAAGACCAAAAAATATAACTCATTAGGCAATCAATACGTTCATTTTAACGTCAGCATCCCAGTAAACCTGACAGATAGACAGCGGGAATTGATTGAAGAGTTTCAGAAAGAAGAGCAATATGAATCTTCCGATAAAGGAAAAGCTGCTTCGGCTTCTGGTTGA

Protein sequence

>Msa0446580

MVRSNGVKLLLRSLSPNLLRNKSVYEGVLQRGYRTLNSGLCNRSSKVTGNYFYNVGDGVKLKNWVLLGAANTYLGATRSIHGSAPLAKDFYDVLGVSKNASSSEIKKAYYGVLKDEEKRQEYDQVGHEGFVNRENGSGDGGFGPFGGGGFGFNPDIFHDLFNRNIGGQDVKTFVELSFMEAVRGCIKTITFQTDMICNTCGGSGVPPGTRPETCKRCKGSGVTSVQAGVFRMETTCGACKGSGKIVKSFCKSCKGAKVTRATKSVKLDIMAGIDNNETIKVYKSGGADPEGDRPGDLYVTVKVREDPVFRREGSDIHVDTVLSITQAILGGTIQVPTLTGDVVVKVRPGTQHGQKVVLKQKGIKTKKYNSLGNQYVHFNVSIPVNLTDRQRELIEEFQKEEQYESSDKGKAASASG*