AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0862020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0862020 MtrunA17_Chr5g0427401 80.444 225 12 2 1 193 1 225 8.30e-125 351
Msa0862020 MtrunA17_Chr5g0412461 47.577 227 83 6 1 192 1 226 1.78e-58 183
Msa0862020 MtrunA17_Chr5g0412271 47.807 228 82 7 1 192 1 227 3.61e-57 179
Msa0862020 MtrunA17_Chr4g0049901 43.868 212 97 5 1 191 27 237 5.43e-46 151
Msa0862020 MtrunA17_Chr2g0279821 48.175 137 70 1 1 136 1 137 3.56e-36 126
Msa0862020 MtrunA17_Chr4g0049541 45.652 138 72 2 1 136 1 137 1.35e-35 124
Msa0862020 MtrunA17_Chr5g0411691 49.650 143 58 3 1 136 1 136 5.18e-34 120
Msa0862020 MtrunA17_Chr3g0097101 40.476 168 95 2 1 166 16 180 2.47e-32 116
Msa0862020 MtrunA17_Chr4g0061691 43.972 141 72 3 1 136 1 139 4.67e-30 110
Msa0862020 MtrunA17_Chr7g0246431 44.604 139 67 2 1 133 1 135 4.94e-30 109
Msa0862020 MtrunA17_Chr3g0077501 40.580 138 80 1 1 136 1 138 2.48e-29 108
Msa0862020 MtrunA17_Chr8g0380021 42.029 138 78 1 1 136 17 154 3.92e-29 108
Msa0862020 MtrunA17_Chr7g0220111 42.754 138 77 2 1 136 1 138 3.98e-29 108
Msa0862020 MtrunA17_Chr3g0125241 42.466 146 73 3 1 141 26 165 2.10e-28 105
Msa0862020 MtrunA17_Chr5g0420091 40.288 139 80 2 1 136 1 139 4.73e-28 104
Msa0862020 MtrunA17_Chr7g0220121 41.429 140 75 4 1 136 1 137 6.03e-28 105
Msa0862020 MtrunA17_Chr4g0057151 42.361 144 69 3 1 136 1 138 9.24e-28 103
Msa0862020 MtrunA17_Chr8g0351051 43.151 146 73 3 1 140 1 142 1.21e-27 104
Msa0862020 MtrunA17_Chr2g0284911 39.855 138 81 1 1 136 16 153 1.68e-27 104
Msa0862020 MtrunA17_Chr6g0455511 41.304 138 79 2 1 136 1 138 2.66e-27 103
Msa0862020 MtrunA17_Chr4g0020221 63.380 71 26 0 1 71 1 71 3.50e-27 103
Msa0862020 MtrunA17_Chr4g0061671 39.416 137 82 1 1 136 1 137 1.09e-26 100
Msa0862020 MtrunA17_Chr4g0018421 36.181 199 109 7 1 187 1 193 1.12e-26 100
Msa0862020 MtrunA17_Chr8g0351041 38.547 179 73 8 1 161 1 160 2.57e-26 99.0
Msa0862020 MtrunA17_Chr8g0366231 41.549 142 74 4 1 136 1 139 6.81e-26 99.8
Msa0862020 MtrunA17_Chr1g0159661 41.304 138 70 3 1 133 1 132 1.34e-25 97.4
Msa0862020 MtrunA17_Chr5g0427921 68.333 60 19 0 1 60 1 60 2.02e-25 93.6
Msa0862020 MtrunA17_Chr8g0351031 41.558 154 57 7 1 136 1 139 6.42e-25 96.7
Msa0862020 MtrunA17_Chr5g0420081 38.571 140 81 3 1 136 1 139 9.90e-24 94.0
Msa0862020 MtrunA17_Chr3g0122251 37.736 159 87 3 1 150 1 156 1.78e-23 93.6
Msa0862020 MtrunA17_Chr2g0308251 51.899 79 38 0 1 79 1 79 2.47e-23 89.0
Msa0862020 MtrunA17_Chr1g0173161 64.516 62 22 0 1 62 1 62 2.76e-23 88.6
Msa0862020 MtrunA17_Chr1g0164791 60.274 73 27 1 1 71 1 73 3.16e-23 92.4
Msa0862020 MtrunA17_Chr1g0204111 37.415 147 89 1 1 144 17 163 3.67e-23 92.8
Msa0862020 MtrunA17_Chr6g0474371 36.486 148 90 2 1 144 1 148 7.46e-23 90.5
Msa0862020 MtrunA17_Chr3g0142191 38.255 149 85 3 1 146 1 145 9.30e-23 91.3
Msa0862020 MtrunA17_Chr5g0404951 36.207 174 93 5 1 165 1 165 4.50e-22 89.7
Msa0862020 MtrunA17_Chr7g0246381 61.667 60 23 0 1 60 1 60 3.41e-21 82.8
Msa0862020 MtrunA17_Chr2g0325971 32.571 175 94 4 2 154 9 181 1.57e-20 85.5
Msa0862020 MtrunA17_Chr8g0377561 60.345 58 23 0 1 58 1 58 3.96e-20 80.9
Msa0862020 MtrunA17_Chr4g0052061 38.971 136 73 4 1 130 1 132 1.65e-19 80.9
Msa0862020 MtrunA17_Chr3g0089141 31.250 176 95 5 2 154 9 181 1.70e-19 82.8
Msa0862020 MtrunA17_Chr1g0208561 51.471 68 33 0 2 69 9 76 2.35e-19 82.4
Msa0862020 MtrunA17_Chr1g0166611 47.368 95 43 3 13 100 17 111 2.46e-19 80.1
Msa0862020 MtrunA17_Chr3g0099421 52.941 68 32 0 2 69 34 101 8.27e-19 81.3
Msa0862020 MtrunA17_Chr4g0052081 49.275 69 35 0 1 69 1 69 2.26e-18 78.6
Msa0862020 MtrunA17_Chr8g0376821 48.611 72 37 0 1 72 1 72 2.92e-18 78.2
Msa0862020 MtrunA17_Chr2g0292791 52.941 68 32 0 2 69 9 76 3.19e-18 79.3
Msa0862020 MtrunA17_Chr1g0208581 50.000 68 34 0 2 69 9 76 3.59e-18 79.0
Msa0862020 MtrunA17_Chr3g0099411 51.471 68 33 0 2 69 9 76 6.06e-18 78.2
Msa0862020 MtrunA17_Chr3g0134451 52.857 70 32 1 1 69 1 70 7.31e-18 79.7
Msa0862020 MtrunA17_Chr1g0206991 51.471 68 33 0 2 69 9 76 7.75e-18 77.4
Msa0862020 MtrunA17_Chr1g0188671 33.974 156 84 2 2 138 47 202 8.92e-18 79.0
Msa0862020 MtrunA17_Chr1g0180591 47.887 71 37 0 1 71 1 71 9.47e-18 77.0
Msa0862020 MtrunA17_Chr5g0419601 50.725 69 34 0 1 69 8 76 1.07e-17 78.2
Msa0862020 MtrunA17_Chr8g0355091 51.471 68 33 0 2 69 9 76 1.12e-17 78.2
Msa0862020 MtrunA17_Chr1g0206721 51.471 68 33 0 2 69 9 76 1.18e-17 77.8
Msa0862020 MtrunA17_Chr1g0206701 51.471 68 33 0 2 69 9 76 1.20e-17 77.8
Msa0862020 MtrunA17_Chr1g0175611 47.826 69 36 0 1 69 1 69 1.53e-17 76.3
Msa0862020 MtrunA17_Chr4g0060841 34.320 169 73 6 1 136 1 164 1.59e-17 79.0
Msa0862020 MtrunA17_Chr1g0169761 48.611 72 37 0 1 72 1 72 1.97e-17 76.3
Msa0862020 MtrunA17_Chr5g0422421 50.000 68 34 0 2 69 9 76 2.35e-17 77.0
Msa0862020 MtrunA17_Chr2g0317451 50.000 68 34 0 2 69 9 76 2.45e-17 77.0
Msa0862020 MtrunA17_Chr2g0317481 50.000 68 34 0 2 69 9 76 2.52e-17 77.0
Msa0862020 MtrunA17_Chr8g0379021 47.059 68 36 0 2 69 12 79 2.54e-17 75.9
Msa0862020 MtrunA17_Chr4g0074101 42.857 77 44 0 1 77 1 77 2.83e-17 76.3
Msa0862020 MtrunA17_Chr8g0357771 44.928 69 38 0 1 69 1 69 8.93e-17 74.3
Msa0862020 MtrunA17_Chr8g0356071 45.833 72 39 0 1 72 1 72 9.03e-17 73.9
Msa0862020 MtrunA17_Chr1g0149391 50.000 68 34 0 2 69 9 76 9.45e-17 75.5
Msa0862020 MtrunA17_Chr5g0422941 47.887 71 37 0 2 72 9 79 1.49e-16 75.1
Msa0862020 MtrunA17_Chr1g0187361 46.479 71 38 0 2 72 9 79 1.53e-16 75.1
Msa0862020 MtrunA17_Chr3g0119901 47.826 69 36 0 1 69 8 76 1.69e-16 74.3
Msa0862020 MtrunA17_Chr1g0175601 47.826 69 36 0 1 69 1 69 2.39e-16 73.2
Msa0862020 MtrunA17_Chr5g0425191 39.806 103 61 1 1 102 1 103 3.26e-16 70.9
Msa0862020 MtrunA17_Chr4g0018951 53.571 56 26 0 14 69 24 79 4.23e-16 72.4
Msa0862020 MtrunA17_Chr2g0333981 43.478 69 39 0 1 69 11 79 5.04e-16 72.4
Msa0862020 MtrunA17_Chr4g0044071 51.724 58 28 0 1 58 1 58 7.43e-16 70.1
Msa0862020 MtrunA17_Chr3g0085241 46.377 69 37 0 1 69 40 108 9.08e-16 73.2
Msa0862020 MtrunA17_Chr2g0300441 31.609 174 92 7 4 155 11 179 9.79e-16 72.8
Msa0862020 MtrunA17_Chr3g0089151 47.059 68 36 0 2 69 9 76 1.68e-15 69.7
Msa0862020 MtrunA17_Chr2g0300421 47.059 68 36 0 2 69 9 76 3.20e-15 70.1
Msa0862020 MtrunA17_Chr5g0417661 54.717 53 24 0 1 53 56 108 3.38e-14 66.2
Msa0862020 MtrunA17_Chr1g0206691 31.818 132 67 3 11 142 1 109 1.22e-12 63.9
Msa0862020 MtrunA17_Chr3g0111841 45.763 59 32 0 8 66 2 60 2.72e-12 59.7
Msa0862020 MtrunA17_Chr1g0187351 42.373 59 34 0 11 69 1 59 6.31e-12 58.9
Msa0862020 MtrunA17_Chr1g0188681 31.138 167 82 8 1 145 1 156 2.92e-11 59.3
Msa0862020 MtrunA17_Chr8g0345001 39.024 82 50 0 3 84 19 100 4.16e-11 59.3
Msa0862020 MtrunA17_Chr4g0071601 40.000 55 33 0 15 69 25 79 7.23e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0862020 AT4G24540.1 52.752 218 74 6 1 190 1 217 3.26e-63 195
Msa0862020 AT2G22540.3 44.351 239 84 6 1 191 1 238 1.57e-58 184
Msa0862020 AT2G22540.1 44.351 239 84 6 1 191 1 238 1.57e-58 184
Msa0862020 AT2G22540.2 43.096 239 82 7 1 191 1 233 8.38e-54 171
Msa0862020 AT3G57230.2 46.207 145 76 2 1 144 1 144 5.54e-38 128
Msa0862020 AT3G57230.1 46.715 137 72 1 1 136 1 137 2.71e-36 127
Msa0862020 AT3G57230.4 46.715 137 72 1 1 136 1 137 2.71e-36 127
Msa0862020 AT4G37940.4 39.604 202 111 4 1 192 1 201 4.88e-35 123
Msa0862020 AT4G37940.3 46.809 141 73 2 1 140 1 140 2.42e-34 120
Msa0862020 AT4G37940.1 46.809 141 73 2 1 140 1 140 1.48e-33 119
Msa0862020 AT2G14210.2 47.143 140 68 3 1 136 1 138 1.63e-31 114
Msa0862020 AT2G14210.1 47.143 140 68 3 1 136 1 138 1.64e-31 114
Msa0862020 AT5G51870.2 41.722 151 77 3 1 144 1 147 6.19e-31 111
Msa0862020 AT3G58780.1 43.571 140 73 2 1 136 16 153 9.41e-31 112
Msa0862020 AT3G58780.5 43.571 140 73 2 1 136 22 159 1.03e-30 113
Msa0862020 AT5G51870.5 41.722 151 77 3 1 144 24 170 1.09e-30 111
Msa0862020 AT3G58780.4 43.571 140 73 2 1 136 16 153 1.51e-30 113
Msa0862020 AT2G42830.1 43.571 140 73 2 1 136 16 153 1.90e-30 112
Msa0862020 AT2G42830.2 43.571 140 73 2 1 136 16 153 2.14e-30 112
Msa0862020 AT5G62165.6 40.411 146 85 1 1 144 1 146 6.70e-30 108
Msa0862020 AT5G62165.9 40.411 146 85 1 1 144 1 146 6.70e-30 108
Msa0862020 AT5G62165.7 40.411 146 85 1 1 144 1 146 6.70e-30 108
Msa0862020 AT5G62165.8 40.411 146 85 1 1 144 1 146 6.70e-30 108
Msa0862020 AT5G62165.13 40.411 146 85 1 1 144 1 146 6.70e-30 108
Msa0862020 AT2G45660.2 45.000 140 67 3 1 134 1 136 1.03e-29 107
Msa0862020 AT5G62165.3 33.014 209 124 3 1 193 1 209 1.21e-29 108
Msa0862020 AT5G62165.1 33.014 209 124 3 1 193 1 209 1.21e-29 108
Msa0862020 AT5G62165.2 33.014 209 124 3 1 193 1 209 1.21e-29 108
Msa0862020 AT5G62165.17 40.845 142 82 1 1 140 1 142 1.56e-29 107
Msa0862020 AT5G62165.12 40.845 142 82 1 1 140 1 142 1.56e-29 107
Msa0862020 AT5G62165.11 40.845 142 82 1 1 140 1 142 1.56e-29 107
Msa0862020 AT2G22630.1 44.681 141 76 2 1 140 1 140 1.72e-29 109
Msa0862020 AT2G22630.2 44.681 141 76 2 1 140 1 140 1.72e-29 109
Msa0862020 AT5G51870.1 35.071 211 108 7 1 190 1 203 1.74e-29 108
Msa0862020 AT5G62165.10 33.659 205 114 3 1 193 1 195 2.36e-29 107
Msa0862020 AT5G62165.4 33.659 205 114 3 1 193 1 195 2.36e-29 107
Msa0862020 AT5G51870.4 41.958 143 72 3 1 136 1 139 2.46e-29 108
Msa0862020 AT4G09960.2 38.356 146 88 1 1 144 1 146 2.74e-29 108
Msa0862020 AT5G51870.3 41.958 143 72 3 1 136 11 149 3.08e-29 108
Msa0862020 AT2G45660.1 45.000 140 67 3 1 134 1 136 3.45e-29 108
Msa0862020 AT5G13790.2 34.234 222 111 4 1 190 1 219 5.86e-29 108
Msa0862020 AT3G02310.2 34.848 198 119 4 1 188 1 198 7.94e-29 106
Msa0862020 AT4G09960.6 39.130 138 82 1 1 136 2 139 9.46e-29 107
Msa0862020 AT4G09960.1 39.130 138 82 1 1 136 1 138 9.97e-29 107
Msa0862020 AT3G30260.1 40.580 138 79 3 1 135 1 138 1.04e-28 107
Msa0862020 AT4G09960.5 39.130 138 82 1 1 136 11 148 1.24e-28 107
Msa0862020 AT4G22950.2 43.571 140 72 2 1 136 1 137 1.35e-28 105
Msa0862020 AT5G13790.1 33.937 221 110 4 1 190 1 216 1.44e-28 107
Msa0862020 AT4G09960.3 39.130 138 82 1 1 136 27 164 3.84e-28 106
Msa0862020 AT4G22950.3 43.571 140 72 2 1 136 1 137 3.86e-28 105
Msa0862020 AT4G22950.1 43.571 140 72 2 1 136 1 137 3.86e-28 105
Msa0862020 AT1G26310.1 41.135 141 78 3 1 136 1 141 8.15e-28 105
Msa0862020 AT5G20240.2 40.426 141 73 3 1 136 1 135 1.25e-27 102
Msa0862020 AT4G09960.4 39.130 138 82 1 1 136 96 233 1.82e-27 106
Msa0862020 AT3G61120.1 42.105 133 77 0 1 133 1 133 2.05e-27 104
Msa0862020 AT5G15800.1 41.259 143 81 2 1 140 1 143 3.10e-27 103
Msa0862020 AT5G20240.1 39.735 151 80 3 1 146 1 145 3.40e-27 102
Msa0862020 AT5G15800.2 41.259 143 81 2 1 140 1 143 3.61e-27 103
Msa0862020 AT5G62165.14 53.409 88 39 1 1 86 1 88 6.81e-27 99.0
Msa0862020 AT3G58780.2 41.429 140 69 2 1 136 16 146 7.96e-27 102
Msa0862020 AT1G69120.2 40.714 140 78 3 1 136 1 139 8.20e-27 102
Msa0862020 AT1G69120.1 40.714 140 78 3 1 136 1 139 1.32e-26 102
Msa0862020 AT5G51860.2 40.714 140 78 3 1 136 1 139 1.35e-26 100
Msa0862020 AT3G02310.1 41.007 139 79 2 1 136 1 139 1.63e-26 102
Msa0862020 AT5G51860.1 40.714 140 78 3 1 136 1 139 1.75e-26 100
Msa0862020 AT5G60910.1 41.259 143 73 4 1 136 1 139 3.55e-26 100
Msa0862020 AT2G45650.1 41.045 134 78 1 1 133 1 134 3.80e-26 101
Msa0862020 AT4G11880.2 41.304 138 79 2 1 136 1 138 7.06e-26 98.6
Msa0862020 AT4G11880.3 41.304 138 79 2 1 136 1 138 7.06e-26 98.6
Msa0862020 AT3G57390.3 63.768 69 25 0 1 69 1 69 7.58e-26 99.8
Msa0862020 AT3G57390.1 38.961 154 83 2 1 144 1 153 1.14e-25 100
Msa0862020 AT4G11880.4 41.304 138 79 2 1 136 1 138 1.22e-25 99.0
Msa0862020 AT4G11880.1 41.304 138 79 2 1 136 1 138 1.22e-25 99.0
Msa0862020 AT5G23260.3 39.157 166 92 3 1 161 1 162 2.36e-25 98.6
Msa0862020 AT1G24260.3 39.726 146 82 3 1 140 1 146 3.18e-25 98.2
Msa0862020 AT3G58780.3 36.970 165 73 3 1 136 16 178 3.18e-25 99.0
Msa0862020 AT5G23260.2 42.759 145 74 3 1 140 1 141 4.04e-25 98.6
Msa0862020 AT1G24260.2 39.726 146 82 3 1 140 1 146 4.79e-25 98.2
Msa0862020 AT5G23260.1 42.759 145 74 3 1 140 17 157 8.03e-25 97.8
Msa0862020 AT5G23260.4 42.759 145 74 3 1 140 17 157 8.73e-25 97.8
Msa0862020 AT4G18960.1 38.686 137 82 1 2 136 18 154 8.82e-25 97.4
Msa0862020 AT1G24260.1 39.865 148 78 3 1 140 1 145 1.58e-24 96.7
Msa0862020 AT3G54340.1 39.333 150 82 4 1 146 1 145 5.81e-23 92.4
Msa0862020 AT1G71692.1 60.000 70 27 1 1 69 1 70 9.02e-23 91.3
Msa0862020 AT2G03710.3 36.364 143 80 4 1 136 1 139 1.91e-22 89.7
Msa0862020 AT5G10140.2 39.552 134 74 4 1 133 1 128 1.96e-22 89.4
Msa0862020 AT5G10140.4 39.552 134 74 4 1 133 1 128 1.99e-22 89.7
Msa0862020 AT2G03710.1 36.170 141 83 3 1 136 1 139 2.02e-22 91.3
Msa0862020 AT5G10140.1 39.552 134 74 4 1 133 1 128 2.10e-22 90.1
Msa0862020 AT2G03710.2 36.170 141 83 3 1 136 1 139 2.11e-22 91.3
Msa0862020 AT5G65070.4 38.235 136 73 5 1 133 1 128 2.29e-22 88.6
Msa0862020 AT5G10140.3 39.552 134 74 4 1 133 1 128 3.24e-22 89.4
Msa0862020 AT5G65060.3 37.778 135 75 5 1 133 1 128 4.17e-22 89.0
Msa0862020 AT5G65060.1 37.778 135 75 5 1 133 1 128 6.97e-22 88.6
Msa0862020 AT5G65070.1 38.235 136 73 5 1 133 1 128 9.40e-22 88.2
Msa0862020 AT5G65050.2 34.783 184 107 8 1 181 1 174 3.10e-21 86.3
Msa0862020 AT5G65060.2 51.250 80 36 2 1 79 1 78 8.57e-21 85.5
Msa0862020 AT5G65050.3 49.383 81 38 2 1 80 1 79 9.11e-21 85.5
Msa0862020 AT5G65050.5 49.383 81 38 2 1 80 1 79 1.02e-20 85.1
Msa0862020 AT5G65050.1 49.383 81 38 2 1 80 1 79 1.02e-20 85.1
Msa0862020 AT5G65070.2 50.704 71 34 1 1 70 1 71 5.23e-20 84.3
Msa0862020 AT5G65070.5 50.704 71 34 1 1 70 1 71 5.32e-20 84.0
Msa0862020 AT5G65080.3 37.778 135 75 4 1 133 8 135 7.43e-20 83.2
Msa0862020 AT2G34440.1 49.275 69 35 0 1 69 1 69 4.37e-19 80.5
Msa0862020 AT1G77080.11 38.519 135 74 5 1 133 1 128 2.78e-18 78.6
Msa0862020 AT3G66656.1 50.725 69 34 0 1 69 1 69 3.51e-18 78.6
Msa0862020 AT5G65070.3 52.308 65 30 1 1 65 1 64 4.36e-18 79.3
Msa0862020 AT1G77080.4 38.519 135 74 5 1 133 1 128 5.03e-18 78.6
Msa0862020 AT1G77080.5 38.519 135 74 5 1 133 1 128 5.17e-18 77.8
Msa0862020 AT2G24840.1 33.557 149 87 3 1 144 62 203 1.54e-17 78.6
Msa0862020 AT1G77080.8 43.519 108 54 4 1 106 1 103 7.73e-17 75.9
Msa0862020 AT1G72350.1 51.471 68 31 1 2 69 43 108 1.04e-16 75.5
Msa0862020 AT1G31140.2 45.946 74 38 1 1 72 1 74 2.54e-16 74.3
Msa0862020 AT1G31140.1 45.946 74 38 1 1 72 1 74 2.56e-16 74.3
Msa0862020 AT5G65080.2 33.835 133 82 3 1 133 8 134 2.84e-16 73.9
Msa0862020 AT4G36590.1 44.595 74 41 0 2 75 7 80 2.86e-16 74.7
Msa0862020 AT1G77980.1 48.571 70 35 1 1 69 1 70 3.54e-16 75.5
Msa0862020 AT5G60440.1 32.298 161 80 4 2 137 7 163 5.93e-16 74.7
Msa0862020 AT1G22130.1 47.143 70 36 1 1 69 1 70 7.69e-16 74.7
Msa0862020 AT1G01530.1 45.455 66 36 0 1 66 6 71 8.19e-16 73.6
Msa0862020 AT2G03060.3 49.315 73 35 1 1 71 1 73 2.43e-15 73.6
Msa0862020 AT2G03060.7 49.315 73 35 1 1 71 1 73 2.43e-15 73.6
Msa0862020 AT2G03060.1 49.315 73 35 1 1 71 1 73 2.43e-15 73.6
Msa0862020 AT2G03060.2 49.315 73 35 1 1 71 1 73 2.89e-15 73.2
Msa0862020 AT1G77080.12 36.090 133 76 4 1 133 1 124 3.13e-15 70.1
Msa0862020 AT1G65360.1 35.238 105 63 2 1 100 6 110 4.47e-15 71.2
Msa0862020 AT3G04100.1 35.075 134 76 4 2 130 14 141 4.75e-15 70.9
Msa0862020 AT1G77080.2 36.090 133 76 4 1 133 1 124 5.90e-15 70.1
Msa0862020 AT1G69540.1 60.377 53 21 0 1 53 1 53 2.35e-14 70.5
Msa0862020 AT1G18750.1 43.836 73 39 1 1 71 1 73 2.82e-14 70.5
Msa0862020 AT1G18750.4 43.836 73 39 1 1 71 1 73 2.91e-14 70.5
Msa0862020 AT1G69540.2 60.377 53 21 0 1 53 1 53 2.98e-14 70.5
Msa0862020 AT1G18750.3 43.836 73 39 1 1 71 1 73 3.55e-14 70.5
Msa0862020 AT1G77950.3 41.429 70 40 1 1 69 1 70 6.42e-14 68.6
Msa0862020 AT1G77950.2 41.429 70 40 1 1 69 1 70 6.42e-14 68.6
Msa0862020 AT1G77950.1 41.429 70 40 1 1 69 1 70 6.42e-14 68.6
Msa0862020 AT1G77950.4 41.429 70 40 1 1 69 1 70 6.42e-14 68.6
Msa0862020 AT1G28460.1 45.588 68 37 0 2 69 8 75 1.41e-13 66.2
Msa0862020 AT1G29962.1 45.588 68 37 0 2 69 8 75 2.01e-13 65.9
Msa0862020 AT1G47760.1 42.647 68 39 0 1 68 1 68 2.74e-13 65.5
Msa0862020 AT4G37435.1 42.857 70 39 1 1 69 1 70 3.42e-13 65.5
Msa0862020 AT2G26320.1 39.437 71 41 1 1 69 17 87 3.16e-12 60.8

Find 58 sgRNAs with CRISPR-Local

Find 871 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTCTTTATTAGCTATATT+TGG 0.152125 5_4:-61563885 Msa0862020:five_prime_UTR
GACTCAATAATTTGTGAAAT+TGG 0.199579 5_4:-61549501 Msa0862020:three_prime_UTR
TTGCAGAGGTTTATCCAATT+TGG 0.271458 5_4:+61554376 None:intergenic
TTACGTTAAGTTCTATCTTT+GGG 0.294383 5_4:-61550245 Msa0862020:CDS
TCTGACACATCTCTTAAGTT+AGG 0.297639 5_4:-61550129 Msa0862020:CDS
GTTACGTTAAGTTCTATCTT+TGG 0.298906 5_4:-61550246 Msa0862020:CDS
TTACCATTTCCTAATTGAAT+TGG 0.316784 5_4:-61549851 Msa0862020:exon
TTAACTAATATTGATGTCAT+TGG 0.333404 5_4:-61549544 Msa0862020:three_prime_UTR
CCCATCATCCCAATTCAATT+AGG 0.336300 5_4:+61549842 None:intergenic
GTCCCACCACATCACCAAAT+TGG 0.337123 5_4:-61554390 Msa0862020:CDS
ACAGCTGCTTACATTATTCA+TGG 0.347856 5_4:+61550182 None:intergenic
AATATGTAGAGAAAGATTAA+TGG 0.356186 5_4:-61563413 Msa0862020:intron
CATGCCAACTGAATTGTATA+AGG 0.358067 5_4:-61554141 Msa0862020:CDS
CTTAGAGGGGTTGCAGCAAT+TGG 0.364033 5_4:-61553952 Msa0862020:CDS
TCAGCCACACCATTCTAATC+AGG 0.374439 5_4:-61563831 Msa0862020:intron
ATTCTTTATTAGCTATATTT+GGG 0.378900 5_4:-61563884 Msa0862020:five_prime_UTR
TACCATTTCCTAATTGAATT+GGG 0.382611 5_4:-61549850 Msa0862020:exon
ATTGAGAAACCTTAGTTGTT+GGG 0.403691 5_4:+61554103 None:intergenic
TTGGAGAAAACTCTTGAATC+AGG 0.405786 5_4:-61553933 Msa0862020:CDS
TTTGATTTGACTTATATAGA+AGG 0.415274 5_4:+61549666 None:intergenic
ATCCCAATTCAATTAGGAAA+TGG 0.426908 5_4:+61549848 None:intergenic
AATTGAGAAACCTTAGTTGT+TGG 0.432761 5_4:+61554102 None:intergenic
TCCTAATTGAATTGGGATGA+TGG 0.436864 5_4:-61549843 Msa0862020:exon
CCTAATTGAATTGGGATGAT+GGG 0.461368 5_4:-61549842 Msa0862020:exon
ATGATACAACCCAACAACTA+AGG 0.469146 5_4:-61554112 Msa0862020:intron
AATATTGATGTCATTGGCAT+GGG 0.470264 5_4:-61549538 Msa0862020:three_prime_UTR
GGCATGGGGTTTAGCAATTG+TGG 0.474414 5_4:-61549523 Msa0862020:three_prime_UTR
TTCGGTTTGATATAGTATGA+AGG 0.479546 5_4:-61554438 Msa0862020:intron
CTGACACATCTCTTAAGTTA+GGG 0.489139 5_4:-61550128 Msa0862020:intron
TATTTATTTAGCAACAAAGA+AGG 0.496768 5_4:-61563915 None:intergenic
CAAGCGTGTGATTGAGATGA+AGG 0.497959 5_4:-61553907 Msa0862020:intron
TTTGAAGGGTTAAACTTAGA+GGG 0.500607 5_4:-61553966 Msa0862020:CDS
ATAACATTTAGAACATCTAT+AGG 0.504679 5_4:-61549594 Msa0862020:three_prime_UTR
TCGGTTTGATATAGTATGAA+GGG 0.513655 5_4:-61554437 Msa0862020:intron
TATCCAATTTGGTGATGTGG+TGG 0.522005 5_4:+61554387 None:intergenic
TACTTTACCTGCACTTGCAG+AGG 0.526172 5_4:+61554362 None:intergenic
TAATATTGATGTCATTGGCA+TGG 0.526288 5_4:-61549539 Msa0862020:three_prime_UTR
GGATAAACCTCTGCAAGTGC+AGG 0.526573 5_4:-61554369 Msa0862020:intron
GAAAACAAACCTGATTAGAA+TGG 0.527475 5_4:+61563822 None:intergenic
ACTTCCTTATACAATTCAGT+TGG 0.535258 5_4:+61554137 None:intergenic
GAGGAATCATCTTCAAGAGA+AGG 0.559575 5_4:+61550150 None:intergenic
TTGAAGGGTTAAACTTAGAG+GGG 0.563668 5_4:-61553965 Msa0862020:CDS
ATCCAATTTGGTGATGTGGT+GGG 0.563973 5_4:+61554388 None:intergenic
CTAATTGAATTGGGATGATG+GGG 0.565042 5_4:-61549841 Msa0862020:exon
GTTTATCCAATTTGGTGATG+TGG 0.574639 5_4:+61554384 None:intergenic
ACATTTAGAACATCTATAGG+AGG 0.579175 5_4:-61549591 Msa0862020:three_prime_UTR
AATGTAAGCAGCTGTAATAG+TGG 0.579600 5_4:-61550174 Msa0862020:CDS
TACGTTAAGTTCTATCTTTG+GGG 0.585861 5_4:-61550244 Msa0862020:CDS
AGGAATCATCTTCAAGAGAA+GGG 0.588663 5_4:+61550151 None:intergenic
CATTTAGAACATCTATAGGA+GGG 0.603467 5_4:-61549590 Msa0862020:three_prime_UTR
GTATGAAGGGCATAATTACA+AGG 0.624293 5_4:-61554424 Msa0862020:CDS
ATTTAGAACATCTATAGGAG+GGG 0.632401 5_4:-61549589 Msa0862020:three_prime_UTR
ATATTGATGTCATTGGCATG+GGG 0.634816 5_4:-61549537 Msa0862020:three_prime_UTR
GTAGAGAAAGATTAATGGCG+AGG 0.644027 5_4:-61563408 Msa0862020:intron
AAATAGATAATGCAACTGCA+AGG 0.650419 5_4:-61563366 Msa0862020:CDS
TAACTTAAGAGATGTGTCAG+AGG 0.666354 5_4:+61550131 None:intergenic
AGGGATCTTCAAGAAAGCTG+AGG 0.666401 5_4:-61563317 Msa0862020:CDS
CAAACCTGATTAGAATGGTG+TGG 0.687648 5_4:+61563827 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAATTATAAAAATT+TGG - chr5_4:61553005-61553024 Msa0862020:intron 0.0%
!! AAAATAAATTATAAAAATTT+GGG - chr5_4:61553006-61553025 Msa0862020:intron 0.0%
!! TATATATATATATATATATA+TGG - chr5_4:61558461-61558480 Msa0862020:intron 0.0%
!! CAATATTAAATTAAACTAAA+AGG + chr5_4:61549720-61549739 None:intergenic 10.0%
!! AAAATGAATTTATAAATCAT+CGG + chr5_4:61550462-61550481 None:intergenic 10.0%
!!! ATTTTAAAATACATATTGAT+GGG + chr5_4:61550665-61550684 None:intergenic 10.0%
!! ATATACTTAATAAATTTGAA+TGG - chr5_4:61551582-61551601 Msa0862020:intron 10.0%
!!! CTTATTTTTTTACTATAAAT+AGG + chr5_4:61552100-61552119 None:intergenic 10.0%
!! TTAAATATAAACAAAATGAT+GGG + chr5_4:61552269-61552288 None:intergenic 10.0%
!! ATTAAATATAAACAAAATGA+TGG + chr5_4:61552270-61552289 None:intergenic 10.0%
!!! TATTAAGATTTATTCATTTT+TGG + chr5_4:61552367-61552386 None:intergenic 10.0%
!! AAATGAATAAATCTTAATAA+AGG - chr5_4:61552368-61552387 Msa0862020:intron 10.0%
!!! TTATTTTATAAATACTCATT+TGG - chr5_4:61552884-61552903 Msa0862020:intron 10.0%
!!! TTTTTTATTGTTAATACATT+TGG - chr5_4:61553223-61553242 Msa0862020:intron 10.0%
!!! TTTTTATTGTTAATACATTT+GGG - chr5_4:61553224-61553243 Msa0862020:intron 10.0%
!! ATAAAATAAACAACATTTAT+GGG + chr5_4:61553539-61553558 None:intergenic 10.0%
!! TATAAAATAAACAACATTTA+TGG + chr5_4:61553540-61553559 None:intergenic 10.0%
!!! TGTAATTTATTTTTTTTAAG+GGG + chr5_4:61554128-61554147 None:intergenic 10.0%
!!! GTTGTAATTTATTTTTTTTA+AGG + chr5_4:61554130-61554149 None:intergenic 10.0%
!!! TTGTAATTTATTTTGTTAAT+GGG - chr5_4:61554305-61554324 Msa0862020:intron 10.0%
!! AAAAAATGGTAAAAAAAAAT+AGG - chr5_4:61558111-61558130 Msa0862020:intron 10.0%
!! AAATAATCAAATAAGATAAA+AGG + chr5_4:61558325-61558344 None:intergenic 10.0%
!!! TTTTATATCTCTTTTTAATT+TGG - chr5_4:61558376-61558395 Msa0862020:intron 10.0%
!!! TATATTCATTTTAAAGTTTT+AGG + chr5_4:61558773-61558792 None:intergenic 10.0%
!! TGTATCAAATAAAAATAATA+TGG + chr5_4:61558845-61558864 None:intergenic 10.0%
!!! TTTTCATTTAAAATCATTTA+AGG + chr5_4:61562244-61562263 None:intergenic 10.0%
!!! TTATAATTTTAATATGACTT+TGG - chr5_4:61563012-61563031 Msa0862020:intron 10.0%
!!! GTTTATTATATGTTTAAAAT+AGG - chr5_4:61563456-61563475 Msa0862020:intron 10.0%
!! ATTCTTTATTAGCTATATTT+GGG - chr5_4:61549462-61549481 Msa0862020:three_prime_UTR 15.0%
!!! AGTAATATAGAAAATTTTGT+AGG + chr5_4:61549755-61549774 None:intergenic 15.0%
!!! TACAAAATTTTCTATATTAC+TGG - chr5_4:61549754-61549773 Msa0862020:intron 15.0%
!! TACGTTATATAACAAAAAAT+GGG + chr5_4:61549832-61549851 None:intergenic 15.0%
!! ATACGTTATATAACAAAAAA+TGG + chr5_4:61549833-61549852 None:intergenic 15.0%
!! CAATAGTTAATAAATTTCAA+TGG - chr5_4:61550427-61550446 Msa0862020:intron 15.0%
!!! CATTTTAAAATACATATTGA+TGG + chr5_4:61550666-61550685 None:intergenic 15.0%
!!! TTTCATTTTAGAGTAAAAAA+TGG + chr5_4:61550973-61550992 None:intergenic 15.0%
!! AAAATGAATTTATAAATCGT+TGG + chr5_4:61551617-61551636 None:intergenic 15.0%
!! ATAGGTGTAAAAATATTATT+AGG + chr5_4:61552082-61552101 None:intergenic 15.0%
!! TATAAGTACATAATATGAAT+AGG - chr5_4:61552236-61552255 Msa0862020:intron 15.0%
!! CAGAGTAATAAAATAATATT+TGG - chr5_4:61552315-61552334 Msa0862020:intron 15.0%
!!! GTTTTTTTGTCTTTTTTTTT+TGG - chr5_4:61552398-61552417 Msa0862020:intron 15.0%
!!! GTTTTTTTGTCTATATTTAA+AGG - chr5_4:61552453-61552472 Msa0862020:intron 15.0%
!! TGAAGATTGTAATATTATAA+TGG + chr5_4:61553353-61553372 None:intergenic 15.0%
!! TTGTTTCAAATTATATTTGT+AGG + chr5_4:61553511-61553530 None:intergenic 15.0%
!! TAAATTAAGTGTTAAAAGTA+TGG + chr5_4:61553638-61553657 None:intergenic 15.0%
!!! TTTGATAATTTGTTTATAAG+TGG - chr5_4:61553697-61553716 Msa0862020:intron 15.0%
!!! TTGATAATTTGTTTATAAGT+GGG - chr5_4:61553698-61553717 Msa0862020:intron 15.0%
!!! GTTGTAATTTATTTTGTTAA+TGG - chr5_4:61554304-61554323 Msa0862020:intron 15.0%
!! TAAGCCAAAAAAATAAATAA+AGG - chr5_4:61554367-61554386 Msa0862020:intron 15.0%
!!! ATTATGCACATTTATTTTTT+TGG + chr5_4:61554426-61554445 None:intergenic 15.0%
!! ATAAGTCAACATTAATATAA+TGG - chr5_4:61555357-61555376 Msa0862020:intron 15.0%
!!! AAACATGAAACTTTTTAATA+GGG + chr5_4:61555447-61555466 None:intergenic 15.0%
!!! TAAGAATGTGTTATTTAATA+TGG + chr5_4:61555502-61555521 None:intergenic 15.0%
!!! TTTTCATAATCAAGATTTTA+AGG + chr5_4:61557776-61557795 None:intergenic 15.0%
!!! TTGTTTAATCATTTTAGTTT+TGG - chr5_4:61558349-61558368 Msa0862020:intron 15.0%
!!! TTATAGTTAACAATTGTTTT+TGG + chr5_4:61559010-61559029 None:intergenic 15.0%
!!! TTATAAACAAATTTGTTCAA+AGG - chr5_4:61559748-61559767 Msa0862020:intron 15.0%
!!! TTTTTTAATCTTTTACATTC+AGG - chr5_4:61559835-61559854 Msa0862020:intron 15.0%
!!! CTAGTTTTGTTTTTAAAAAA+GGG + chr5_4:61561651-61561670 None:intergenic 15.0%
!! ATTTGAATATACAAAATCTT+TGG - chr5_4:61561996-61562015 Msa0862020:intron 15.0%
!! TTTGAATATACAAAATCTTT+GGG - chr5_4:61561997-61562016 Msa0862020:intron 15.0%
!!! ATTAAGATTTTTATTGAAGA+GGG + chr5_4:61562087-61562106 None:intergenic 15.0%
!!! AATTAAGATTTTTATTGAAG+AGG + chr5_4:61562088-61562107 None:intergenic 15.0%
!! AACTATTAGAAAATATTTAG+AGG - chr5_4:61562481-61562500 Msa0862020:intron 15.0%
!! TTTAATGATATTCCATAATT+TGG + chr5_4:61562751-61562770 None:intergenic 15.0%
!! ACATAGTTCAAATATATATA+TGG - chr5_4:61563271-61563290 Msa0862020:CDS 15.0%
!!! TTATATGTTTAAAATAGGTT+TGG - chr5_4:61563461-61563480 Msa0862020:intron 15.0%
!!! TCAAGTTATATAACTTTTTT+GGG + chr5_4:61563720-61563739 None:intergenic 15.0%
!!! ATCAAGTTATATAACTTTTT+TGG + chr5_4:61563721-61563740 None:intergenic 15.0%
!! GATTCTTTATTAGCTATATT+TGG - chr5_4:61549461-61549480 Msa0862020:three_prime_UTR 20.0%
!!! TCATGTTTTCTTTCTATTAT+TGG - chr5_4:61549581-61549600 Msa0862020:three_prime_UTR 20.0%
!! TTAATCTTTCTCTACATATT+CGG + chr5_4:61549933-61549952 None:intergenic 20.0%
!! AATATGTAGAGAAAGATTAA+TGG - chr5_4:61549933-61549952 Msa0862020:intron 20.0%
!! CTTTATTATGATATTTCATG+CGG - chr5_4:61550233-61550252 Msa0862020:CDS 20.0%
!! TTTATTATGATATTTCATGC+GGG - chr5_4:61550234-61550253 Msa0862020:CDS 20.0%
!! AGTTCAATGATATATTTGTT+AGG + chr5_4:61550844-61550863 None:intergenic 20.0%
!! AACAAATATATCATTGAACT+TGG - chr5_4:61550844-61550863 Msa0862020:intron 20.0%
!! ACAAATATATCATTGAACTT+GGG - chr5_4:61550845-61550864 Msa0862020:intron 20.0%
!!! AAACATCATTTTTGTCATTT+TGG - chr5_4:61550905-61550924 Msa0862020:intron 20.0%
!!! AAAAAATGGTTTTTTTGAGA+TGG + chr5_4:61550959-61550978 None:intergenic 20.0%
!!! CTCTAAAATGAAAAGTTATT+AGG - chr5_4:61550980-61550999 Msa0862020:intron 20.0%
!!! ATATTTTTATGCTTCATTTC+TGG - chr5_4:61551122-61551141 Msa0862020:intron 20.0%
!!! TATTTTTATGCTTCATTTCT+GGG - chr5_4:61551123-61551142 Msa0862020:intron 20.0%
!!! AAATGTGTTTTTTTAAGACA+GGG + chr5_4:61551205-61551224 None:intergenic 20.0%
!!! CATTGAAGCTTTTTTATTTT+TGG - chr5_4:61551333-61551352 Msa0862020:intron 20.0%
!!! GAAATAATTTGTAATTAGCT+AGG - chr5_4:61551710-61551729 Msa0862020:intron 20.0%
!! TAGATTTAAACATACACTAT+CGG + chr5_4:61552555-61552574 None:intergenic 20.0%
!! TATAGATCGACTAATTTAAA+GGG + chr5_4:61552684-61552703 None:intergenic 20.0%
!! GATAATTACATATTTGAACT+TGG + chr5_4:61552765-61552784 None:intergenic 20.0%
!! AATAACATTTCTCATAGTAA+GGG + chr5_4:61553059-61553078 None:intergenic 20.0%
!! AAATAACATTTCTCATAGTA+AGG + chr5_4:61553060-61553079 None:intergenic 20.0%
!! ATTCACATCTTTATATTTCA+AGG + chr5_4:61553296-61553315 None:intergenic 20.0%
!!! GTATTTAAAATAGTGATGTT+TGG - chr5_4:61553324-61553343 Msa0862020:intron 20.0%
!!! TGATAATTTGTTTATAAGTG+GGG - chr5_4:61553699-61553718 Msa0862020:intron 20.0%
!!! AAAAAAAAGTATAGCAGTTT+TGG - chr5_4:61554071-61554090 Msa0862020:intron 20.0%
!!! CCTTCCTTTATTTATTTTTT+TGG + chr5_4:61554374-61554393 None:intergenic 20.0%
!! CCAAAAAAATAAATAAAGGA+AGG - chr5_4:61554371-61554390 Msa0862020:CDS 20.0%
!! CAATAAAAATCTTTCAAAGT+TGG - chr5_4:61554639-61554658 Msa0862020:intron 20.0%
!!! GATGATTTTTCTTATCATTT+TGG + chr5_4:61554795-61554814 None:intergenic 20.0%
!!! ATGATAAACACTTTTTTTTG+AGG - chr5_4:61554957-61554976 Msa0862020:intron 20.0%
!!! TGATAAACACTTTTTTTTGA+GGG - chr5_4:61554958-61554977 Msa0862020:intron 20.0%
!!! ATTTTATCCTATCATATGTT+TGG - chr5_4:61555043-61555062 Msa0862020:intron 20.0%
!!! TTTAAGTTATCATTTCCTAT+TGG - chr5_4:61555168-61555187 Msa0862020:intron 20.0%
!!! ATATTAATGTTGACTTATTG+TGG + chr5_4:61555355-61555374 None:intergenic 20.0%
!!! GAAACATGAAACTTTTTAAT+AGG + chr5_4:61555448-61555467 None:intergenic 20.0%
!! AACACATCATTGAAATATAT+CGG + chr5_4:61555633-61555652 None:intergenic 20.0%
!!! ATGTTTTGGAAGATTAAAAA+AGG + chr5_4:61556808-61556827 None:intergenic 20.0%
!! AGAATTCTTCTATAATGAAT+TGG - chr5_4:61558194-61558213 Msa0862020:intron 20.0%
!! GAATTCTTCTATAATGAATT+GGG - chr5_4:61558195-61558214 Msa0862020:intron 20.0%
!! AATTCTTCTATAATGAATTG+GGG - chr5_4:61558196-61558215 Msa0862020:intron 20.0%
!! TTAAATGTTGTATGTGTTAT+TGG - chr5_4:61558677-61558696 Msa0862020:intron 20.0%
!! TAGGTTTAATTCTTCTAATA+TGG + chr5_4:61558754-61558773 None:intergenic 20.0%
!!! ATAGTTAACATTTTGCAATT+TGG + chr5_4:61559064-61559083 None:intergenic 20.0%
!! ATGAAATTACAATATGTCTA+AGG - chr5_4:61559304-61559323 Msa0862020:intron 20.0%
!! ATATGATCATTTGGTTAATT+TGG - chr5_4:61559470-61559489 Msa0862020:intron 20.0%
!!! ATCTTTTTAAATGACATCAA+TGG - chr5_4:61559715-61559734 Msa0862020:intron 20.0%
!!! ATAAAAGTTATAAGTGGTTT+TGG + chr5_4:61559799-61559818 None:intergenic 20.0%
!! CTGTATATAAAAGTTATAAG+TGG + chr5_4:61559805-61559824 None:intergenic 20.0%
!! AAGAAGATTCTTAATGAAAT+TGG - chr5_4:61559860-61559879 Msa0862020:intron 20.0%
!! AGAAGATTCTTAATGAAATT+GGG - chr5_4:61559861-61559880 Msa0862020:intron 20.0%
!! ATTGTTTGAACTTCATATAA+AGG - chr5_4:61559907-61559926 Msa0862020:intron 20.0%
!!! TATATATGTTGATTAGTTGT+TGG - chr5_4:61560052-61560071 Msa0862020:intron 20.0%
!! TTCTTAGAATTTATATCCAA+TGG - chr5_4:61560122-61560141 Msa0862020:intron 20.0%
!!! TAAAGTTTAGTTCGTTAATT+AGG + chr5_4:61560213-61560232 None:intergenic 20.0%
!!! ATAATCTTTCTAGCAATAAT+TGG - chr5_4:61560814-61560833 Msa0862020:intron 20.0%
!!! CTGAATTTTAAAGAATCTTT+GGG + chr5_4:61561200-61561219 None:intergenic 20.0%
!!! TGAAAAAAGTTGATAAGTAA+CGG + chr5_4:61561286-61561305 None:intergenic 20.0%
!!! CCTAGTTTTGTTTTTAAAAA+AGG + chr5_4:61561652-61561671 None:intergenic 20.0%
!!! CCTTTTTTAAAAACAAAACT+AGG - chr5_4:61561649-61561668 Msa0862020:intron 20.0%
!!! TTTTAAAAACAAAACTAGGA+AGG - chr5_4:61561653-61561672 Msa0862020:intron 20.0%
!! ACATAGTGTTAATTCAAATT+GGG + chr5_4:61561728-61561747 None:intergenic 20.0%
!! TTAAACAATAGTTAGATCTT+TGG + chr5_4:61561763-61561782 None:intergenic 20.0%
!! TTGAATATACAAAATCTTTG+GGG - chr5_4:61561998-61562017 Msa0862020:intron 20.0%
!! TTCAATTAGTAGTATTGTTT+GGG + chr5_4:61562059-61562078 None:intergenic 20.0%
!! TTGTACAACAAAAATTCAAT+TGG - chr5_4:61562125-61562144 Msa0862020:intron 20.0%
!! TAAACATAAACTAAATCATG+CGG - chr5_4:61562359-61562378 Msa0862020:intron 20.0%
!!! ATCATGATCTTTTTTTTGTA+AGG - chr5_4:61562698-61562717 Msa0862020:intron 20.0%
!! ATTATTATCATCTATGTACA+TGG - chr5_4:61562725-61562744 Msa0862020:intron 20.0%
!! GATGACTAATGAATATAATA+AGG - chr5_4:61563310-61563329 Msa0862020:CDS 20.0%
!! TTATAACTTATTCTTGTAAG+TGG - chr5_4:61563538-61563557 Msa0862020:intron 20.0%
!!! AAATAAGATAGTTGTGATTT+TGG + chr5_4:61563581-61563600 None:intergenic 20.0%
!!! ACAACTATCTTATTTTGTAA+TGG - chr5_4:61563586-61563605 Msa0862020:intron 20.0%
!!! TTTGATTTGACTTATATAGA+AGG + chr5_4:61563683-61563702 None:intergenic 20.0%
!!! ATAACATTTAGAACATCTAT+AGG - chr5_4:61563752-61563771 Msa0862020:intron 20.0%
!! TTAACTAATATTGATGTCAT+TGG - chr5_4:61563802-61563821 Msa0862020:intron 20.0%
!! AATGATATAACGTAAAAATG+TGG + chr5_4:61563906-61563925 None:intergenic 20.0%
!!! TGAATTTTCAAGAAAGGAAA+GGG + chr5_4:61549498-61549517 None:intergenic 25.0%
! TAATAGAAAGAAAACATGAG+AGG + chr5_4:61549580-61549599 None:intergenic 25.0%
!!! CTAAAAGGAATTAGCTTTAT+GGG + chr5_4:61549705-61549724 None:intergenic 25.0%
!!! ACTAAAAGGAATTAGCTTTA+TGG + chr5_4:61549706-61549725 None:intergenic 25.0%
!!! TTGTTATTTTCTCAACTACT+GGG - chr5_4:61550085-61550104 Msa0862020:intron 25.0%
!!! TAGTTTGTGGTTTATTTTTG+TGG - chr5_4:61550694-61550713 Msa0862020:intron 25.0%
!!! AGTTTGTGGTTTATTTTTGT+GGG - chr5_4:61550695-61550714 Msa0862020:intron 25.0%
! CACTGTTAAAAAAAAACTCT+AGG - chr5_4:61550792-61550811 Msa0862020:intron 25.0%
!! ATATTTGTTAGGTATCAAGA+AGG + chr5_4:61550833-61550852 None:intergenic 25.0%
!!! AATGTGTTTTTTTAAGACAG+GGG + chr5_4:61551204-61551223 None:intergenic 25.0%
!!! GAAATGTGTTTTTTTAAGAC+AGG + chr5_4:61551206-61551225 None:intergenic 25.0%
! ACATTTCCTCAACAAAAATA+AGG - chr5_4:61551219-61551238 Msa0862020:intron 25.0%
! CATTTCCTCAACAAAAATAA+GGG - chr5_4:61551220-61551239 Msa0862020:intron 25.0%
!!! TAATTCCCTTATTTTTGTTG+AGG + chr5_4:61551228-61551247 None:intergenic 25.0%
!!! TGAAGCTTTTTTATTTTTGG+AGG - chr5_4:61551336-61551355 Msa0862020:intron 25.0%
!!! TTTTTATTTTTGGAGGTGTA+AGG - chr5_4:61551343-61551362 Msa0862020:intron 25.0%
!!! TTTTATTTTTGGAGGTGTAA+GGG - chr5_4:61551344-61551363 Msa0862020:intron 25.0%
! AGAAGATTTACTATGTAAGA+TGG - chr5_4:61551434-61551453 Msa0862020:intron 25.0%
! ATTTACTATGTAAGATGGAA+TGG - chr5_4:61551439-61551458 Msa0862020:intron 25.0%
! TAGGTCTCTAGATTAATTTA+GGG - chr5_4:61551474-61551493 Msa0862020:intron 25.0%
!! AAGTTATTTCAGATCTCAAA+AGG - chr5_4:61552013-61552032 Msa0862020:intron 25.0%
! ATTTCGATTAAATGATAGAC+TGG - chr5_4:61552052-61552071 Msa0862020:intron 25.0%
!!! TAGTGCCTTAAACTTTTTTT+TGG - chr5_4:61552421-61552440 Msa0862020:intron 25.0%
! CACTACCAAAAAAAAGTTTA+AGG + chr5_4:61552429-61552448 None:intergenic 25.0%
! ATAGTAGTTGTTAACTCATT+TGG - chr5_4:61552523-61552542 Msa0862020:intron 25.0%
! TAGTAGTTGTTAACTCATTT+GGG - chr5_4:61552524-61552543 Msa0862020:intron 25.0%
!! GATCTAATGTATGTCAATTT+TGG - chr5_4:61552591-61552610 Msa0862020:intron 25.0%
!!! TAATGTATGTCAATTTTGGT+GGG - chr5_4:61552595-61552614 Msa0862020:intron 25.0%
!! AACCTTGATTTGACTTTAAA+TGG - chr5_4:61552629-61552648 Msa0862020:intron 25.0%
!! ACCTTGATTTGACTTTAAAT+GGG - chr5_4:61552630-61552649 Msa0862020:intron 25.0%
! GTATAGATCGACTAATTTAA+AGG + chr5_4:61552685-61552704 None:intergenic 25.0%
!!! TTAATTCTCATCTTTTTCGT+TGG - chr5_4:61553380-61553399 Msa0862020:intron 25.0%
!!! TAATTCTCATCTTTTTCGTT+GGG - chr5_4:61553381-61553400 Msa0862020:intron 25.0%
!!! GAAAACTTTTTTTACTCTCA+TGG - chr5_4:61553403-61553422 Msa0862020:intron 25.0%
! TGTTATTAAGTTTCTGCTAT+CGG - chr5_4:61553814-61553833 Msa0862020:intron 25.0%
!! ATGTTCATGCCATATTTTAT+CGG + chr5_4:61553871-61553890 None:intergenic 25.0%
!! ATCTTACAAACCAATTTTGT+GGG - chr5_4:61553916-61553935 Msa0862020:CDS 25.0%
!!! TGTATTGATTGAGTCAAAAT+TGG - chr5_4:61554235-61554254 Msa0862020:intron 25.0%
! TATATCTAACTTATTATCCC+CGG + chr5_4:61554577-61554596 None:intergenic 25.0%
! CAATAAATATGTTCGAGATA+AGG - chr5_4:61554731-61554750 Msa0862020:intron 25.0%
!!! ATCATTTTGGTGATTCTTTT+TGG + chr5_4:61554782-61554801 None:intergenic 25.0%
! TAAGAAAAATCATCGATAAG+AGG - chr5_4:61554801-61554820 Msa0862020:intron 25.0%
! GACAAGATAAGATTAGAAAA+TGG - chr5_4:61554910-61554929 Msa0862020:intron 25.0%
!!! GATAAACACTTTTTTTTGAG+GGG - chr5_4:61554959-61554978 Msa0862020:intron 25.0%
! TGATAAGAAAAAAGTTGACA+AGG - chr5_4:61555080-61555099 Msa0862020:intron 25.0%
! AAAAATAACAAAGAGTGAGT+AGG - chr5_4:61555128-61555147 Msa0862020:intron 25.0%
! CACATATAAAAACTATGTCA+TGG + chr5_4:61555396-61555415 None:intergenic 25.0%
! GAGAACAATTTAAACCTAAT+AGG - chr5_4:61555683-61555702 Msa0862020:intron 25.0%
! AACCTAATAGGTTTACTTAA+CGG - chr5_4:61555695-61555714 Msa0862020:intron 25.0%
! TGGAAATTTATGAACTATTG+TGG + chr5_4:61556062-61556081 None:intergenic 25.0%
! AGAATTTAGAGATATGACAA+TGG + chr5_4:61556082-61556101 None:intergenic 25.0%
!!! CTTTGAGATATTTCATAACA+TGG - chr5_4:61556292-61556311 Msa0862020:intron 25.0%
! GGTAAGTATTAAAGATTAGT+GGG + chr5_4:61556423-61556442 None:intergenic 25.0%
! ATACTTACCCTTATAAATGT+TGG - chr5_4:61556434-61556453 Msa0862020:intron 25.0%
! GAAAATGCCAACATTTATAA+GGG + chr5_4:61556444-61556463 None:intergenic 25.0%
! TTACATGAGACTATATGATT+GGG + chr5_4:61556683-61556702 None:intergenic 25.0%
!!! CCAATTAAATTTGGTCTTTT+AGG + chr5_4:61557512-61557531 None:intergenic 25.0%
! CCTAAAAGACCAAATTTAAT+TGG - chr5_4:61557509-61557528 Msa0862020:intron 25.0%
! AAAAGACCAAATTTAATTGG+AGG - chr5_4:61557512-61557531 Msa0862020:intron 25.0%
! AAAGACCAAATTTAATTGGA+GGG - chr5_4:61557513-61557532 Msa0862020:intron 25.0%
!!! TTATGATTTTGGAGAAGTAA+AGG - chr5_4:61557660-61557679 Msa0862020:intron 25.0%
! TGGTTTAAGTGAGTTTAAAA+AGG - chr5_4:61557938-61557957 Msa0862020:intron 25.0%
! AACCTAAAGAAGAAAAAAAG+AGG - chr5_4:61557963-61557982 Msa0862020:intron 25.0%
! ACCTAAAGAAGAAAAAAAGA+GGG - chr5_4:61557964-61557983 Msa0862020:intron 25.0%
!!! CCATTTTTTTGAATCTCTTT+CGG + chr5_4:61558100-61558119 None:intergenic 25.0%
!!! TCTCTTTTTAATTTGGAAGA+TGG - chr5_4:61558383-61558402 Msa0862020:intron 25.0%
!!! CTCTTTTTAATTTGGAAGAT+GGG - chr5_4:61558384-61558403 Msa0862020:intron 25.0%
! CTTTGACAAAAGTGAAAAAT+GGG + chr5_4:61558645-61558664 None:intergenic 25.0%
! ACTTTGACAAAAGTGAAAAA+TGG + chr5_4:61558646-61558665 None:intergenic 25.0%
! GCAATCTTAAAACTAAGATA+TGG + chr5_4:61558728-61558747 None:intergenic 25.0%
! CTCATCCTTAACTATTATTT+CGG - chr5_4:61558890-61558909 Msa0862020:intron 25.0%
! TCAAACCGAAATAATAGTTA+AGG + chr5_4:61558898-61558917 None:intergenic 25.0%
! TTGTTAACTATAAGTCATGA+AGG - chr5_4:61559017-61559036 Msa0862020:intron 25.0%
! TGTTAACTATAAGTCATGAA+GGG - chr5_4:61559018-61559037 Msa0862020:intron 25.0%
! AATTCTCCATTGTTAATTTC+AGG - chr5_4:61559172-61559191 Msa0862020:intron 25.0%
! TTTCTACCTGAAATTAACAA+TGG + chr5_4:61559181-61559200 None:intergenic 25.0%
! GAAGATTCTTAATGAAATTG+GGG - chr5_4:61559862-61559881 Msa0862020:intron 25.0%
! CTAGTTTGAACTTCATATAA+AGG - chr5_4:61560016-61560035 Msa0862020:intron 25.0%
! TCAACTTAAAATGAGTTTGT+GGG + chr5_4:61560259-61560278 None:intergenic 25.0%
!!! AACTCATTTTAAGTTGAGTT+TGG - chr5_4:61560262-61560281 Msa0862020:intron 25.0%
! AAACAGAAAAACAAGTAACA+AGG - chr5_4:61560308-61560327 Msa0862020:intron 25.0%
! AAGAAAAAGATCTAACAACT+CGG - chr5_4:61560335-61560354 Msa0862020:intron 25.0%
!! AATCCTCCTCTATAAATTTT+TGG - chr5_4:61560628-61560647 Msa0862020:intron 25.0%
! ATCGTTCCAAAAATTTATAG+AGG + chr5_4:61560637-61560656 None:intergenic 25.0%
!!! AGGAAAACTATCATTTTTGA+AGG - chr5_4:61560838-61560857 Msa0862020:intron 25.0%
! TTGAGTCATTGTTCAAATTA+AGG + chr5_4:61560898-61560917 None:intergenic 25.0%
! CATAACATACTCTATTTGTT+AGG + chr5_4:61561064-61561083 None:intergenic 25.0%
!!! GCTGAATTTTAAAGAATCTT+TGG + chr5_4:61561201-61561220 None:intergenic 25.0%
!!! AAAAAAGTTGATAAGTAACG+GGG + chr5_4:61561284-61561303 None:intergenic 25.0%
!!! GAAAAAAGTTGATAAGTAAC+GGG + chr5_4:61561285-61561304 None:intergenic 25.0%
!! ATATTCAAATAGGGTTTGTT+TGG + chr5_4:61561455-61561474 None:intergenic 25.0%
! AAGTGGTTCATATTCAAATA+GGG + chr5_4:61561464-61561483 None:intergenic 25.0%
! TAAGTGGTTCATATTCAAAT+AGG + chr5_4:61561465-61561484 None:intergenic 25.0%
!!! TTAAATCTTTGAAGTTACGT+AGG + chr5_4:61561627-61561646 None:intergenic 25.0%
! GACATAGTGTTAATTCAAAT+TGG + chr5_4:61561729-61561748 None:intergenic 25.0%
! TGACAAAATCGTTAAAGATT+AGG + chr5_4:61561833-61561852 None:intergenic 25.0%
! ATATTCAAATTCAATTGCAG+TGG + chr5_4:61561986-61562005 None:intergenic 25.0%
! CTTCAATTAGTAGTATTGTT+TGG + chr5_4:61562060-61562079 None:intergenic 25.0%
!! GAAGAATATTTTCTCTTCTA+AGG + chr5_4:61562169-61562188 None:intergenic 25.0%
! AACCCATATCATATAAATCA+CGG + chr5_4:61562275-61562294 None:intergenic 25.0%
! ACAACTTAAACACAAAAAAC+TGG - chr5_4:61562307-61562326 Msa0862020:intron 25.0%
!! TTTTAGTGAAATAATGACTC+CGG - chr5_4:61562807-61562826 Msa0862020:intron 25.0%
!! GACAAAAAACACAGATATTT+TGG + chr5_4:61562834-61562853 None:intergenic 25.0%
!! TTTTAACCATATGCCAAAAA+AGG - chr5_4:61562917-61562936 Msa0862020:intron 25.0%
! TTACGTTAAGTTCTATCTTT+GGG - chr5_4:61563101-61563120 Msa0862020:intron 25.0%
! CAAATTTCAGCAATTAACAA+AGG + chr5_4:61563423-61563442 None:intergenic 25.0%
! TTACCATTTCCTAATTGAAT+TGG - chr5_4:61563495-61563514 Msa0862020:intron 25.0%
! TACCATTTCCTAATTGAATT+GGG - chr5_4:61563496-61563515 Msa0862020:intron 25.0%
! TTATTCTTGTAAGTGGAATT+TGG - chr5_4:61563545-61563564 Msa0862020:intron 25.0%
!! GACTCAATAATTTGTGAAAT+TGG - chr5_4:61563845-61563864 Msa0862020:five_prime_UTR 25.0%
!! AATTTTCAAGAAAGGAAAGG+GGG + chr5_4:61549496-61549515 None:intergenic 30.0%
!! GAATTTTCAAGAAAGGAAAG+GGG + chr5_4:61549497-61549516 None:intergenic 30.0%
!! CTGAATTTTCAAGAAAGGAA+AGG + chr5_4:61549499-61549518 None:intergenic 30.0%
GAAAACAAACCTGATTAGAA+TGG + chr5_4:61549527-61549546 None:intergenic 30.0%
! TGGTTTTTACTTACAAGTAC+TGG - chr5_4:61549631-61549650 Msa0862020:three_prime_UTR 30.0%
AAATAGATAATGCAACTGCA+AGG - chr5_4:61549980-61549999 Msa0862020:intron 30.0%
!!! CTTGTTATTTTCTCAACTAC+TGG - chr5_4:61550084-61550103 Msa0862020:intron 30.0%
ATATTTCATGCGGGAAAATA+GGG - chr5_4:61550243-61550262 Msa0862020:CDS 30.0%
AAGATTTACCATGTAGAAGA+TGG - chr5_4:61550305-61550324 Msa0862020:intron 30.0%
AATTCGTAATTAGCTACGAA+CGG - chr5_4:61550513-61550532 Msa0862020:intron 30.0%
!!! CATTTTTTCTTCTAACACCT+TGG - chr5_4:61550539-61550558 Msa0862020:intron 30.0%
!!! ACTCAATCAAAGCGATTTTT+TGG - chr5_4:61550580-61550599 Msa0862020:intron 30.0%
!! TTTCTAGCTAGGAACAAAAA+GGG - chr5_4:61550609-61550628 Msa0862020:intron 30.0%
!! AAATGTCGTGATTTAGTTTG+TGG - chr5_4:61550681-61550700 Msa0862020:intron 30.0%
! CTATATCGGAAAAAGTACAA+GGG + chr5_4:61550729-61550748 None:intergenic 30.0%
! ACTATATCGGAAAAAGTACA+AGG + chr5_4:61550730-61550749 None:intergenic 30.0%
!!! GTACTTTTTCCGATATAGTT+AGG - chr5_4:61550731-61550750 Msa0862020:intron 30.0%
!! ACAAGAGTACCTAACTATAT+CGG + chr5_4:61550743-61550762 None:intergenic 30.0%
GTAGGTCTCTAGATTAATTT+AGG - chr5_4:61551473-61551492 Msa0862020:intron 30.0%
CAAAGATTTCATAGATGTGT+AGG + chr5_4:61551957-61551976 None:intergenic 30.0%
! CTAATGTATGTCAATTTTGG+TGG - chr5_4:61552594-61552613 Msa0862020:intron 30.0%
! TCCCATTTAAAGTCAAATCA+AGG + chr5_4:61552634-61552653 None:intergenic 30.0%
AAATTAGTCGATCTATACGT+AGG - chr5_4:61552687-61552706 Msa0862020:intron 30.0%
!!! ACTCATTTGGATTTTAGAGT+TGG - chr5_4:61552897-61552916 Msa0862020:intron 30.0%
CACATTATCGTGTATATCTT+TGG + chr5_4:61553115-61553134 None:intergenic 30.0%
CAAAGATATACACGATAATG+TGG - chr5_4:61553113-61553132 Msa0862020:intron 30.0%
ATAATCATCACCTTACAAGT+CGG - chr5_4:61553722-61553741 Msa0862020:intron 30.0%
TAGTATCAGAGTCTGATTTA+AGG - chr5_4:61553785-61553804 Msa0862020:intron 30.0%
AGTATCAGAGTCTGATTTAA+GGG - chr5_4:61553786-61553805 Msa0862020:intron 30.0%
! TGTTCATGCCATATTTTATC+GGG + chr5_4:61553870-61553889 None:intergenic 30.0%
TGAACATGTGTTTATAAGTG+AGG - chr5_4:61553884-61553903 Msa0862020:intron 30.0%
! CATCTTACAAACCAATTTTG+TGG - chr5_4:61553915-61553934 Msa0862020:CDS 30.0%
! TCTTACAAACCAATTTTGTG+GGG - chr5_4:61553917-61553936 Msa0862020:CDS 30.0%
AACTCTTAGAAATCGTGATT+GGG + chr5_4:61553953-61553972 None:intergenic 30.0%
TAACTCTTAGAAATCGTGAT+TGG + chr5_4:61553954-61553973 None:intergenic 30.0%
AACAAACTCAATGGTATCAA+GGG + chr5_4:61554033-61554052 None:intergenic 30.0%
TAACAAACTCAATGGTATCA+AGG + chr5_4:61554034-61554053 None:intergenic 30.0%
! TTGATACCATTGAGTTTGTT+AGG - chr5_4:61554033-61554052 Msa0862020:intron 30.0%
AAATAGCCTAACAAACTCAA+TGG + chr5_4:61554042-61554061 None:intergenic 30.0%
!! ATTGAGTCAAAATTGGTCTT+GGG - chr5_4:61554242-61554261 Msa0862020:intron 30.0%
CAAAAAGATCGTGATACTTA+GGG - chr5_4:61554329-61554348 Msa0862020:intron 30.0%
AAAAAGATCGTGATACTTAG+GGG - chr5_4:61554330-61554349 Msa0862020:intron 30.0%
!!! TTTTGGCTTAATTGCAGTTT+CGG + chr5_4:61554357-61554376 None:intergenic 30.0%
AAGGAATCAATGTGCATAAT+AGG - chr5_4:61554390-61554409 Msa0862020:CDS 30.0%
AATCAATGTGCATAATAGGA+AGG - chr5_4:61554394-61554413 Msa0862020:CDS 30.0%
TGTCTTTGTGACTTATCAAT+TGG + chr5_4:61554533-61554552 None:intergenic 30.0%
ACAATTGGTTATGAAAGTTC+CGG - chr5_4:61554555-61554574 Msa0862020:intron 30.0%
GTTAGATATACGATTCTAAG+AGG - chr5_4:61554587-61554606 Msa0862020:intron 30.0%
TAATGACATTCTTACCATTG+TGG + chr5_4:61554703-61554722 None:intergenic 30.0%
! ATTTTCTTCTCTCGAGTTAT+AGG + chr5_4:61554841-61554860 None:intergenic 30.0%
ATCTTACTCACTATTCTCTA+AGG - chr5_4:61554859-61554878 Msa0862020:intron 30.0%
CACTTATCATGTCATGTATT+TGG - chr5_4:61554990-61555009 Msa0862020:intron 30.0%
TATGATGAACAGATAGCTTT+GGG + chr5_4:61555277-61555296 None:intergenic 30.0%
ATATGATGAACAGATAGCTT+TGG + chr5_4:61555278-61555297 None:intergenic 30.0%
AAAGCTATCTGTTCATCATA+TGG - chr5_4:61555277-61555296 Msa0862020:intron 30.0%
TGTACTTATTAGTAGCAGTA+AGG - chr5_4:61555324-61555343 Msa0862020:intron 30.0%
! CAGTTTGGATCAATTTTCAA+AGG + chr5_4:61555534-61555553 None:intergenic 30.0%
TGTACACCTTGTAGAAAATT+AGG - chr5_4:61555607-61555626 Msa0862020:intron 30.0%
ACCTAATAGGTTTACTTAAC+GGG - chr5_4:61555696-61555715 Msa0862020:intron 30.0%
ACTAATCTGACTTCATCTTT+CGG - chr5_4:61555823-61555842 Msa0862020:intron 30.0%
GTGATTATGTGCAATACTAA+TGG - chr5_4:61555960-61555979 Msa0862020:intron 30.0%
GATTTGAAGATACAATGTGA+AGG + chr5_4:61556016-61556035 None:intergenic 30.0%
GTTACTATATTGTCTTGTGT+GGG + chr5_4:61556164-61556183 None:intergenic 30.0%
AGATGACTCTTGATTAAAAG+AGG + chr5_4:61556261-61556280 None:intergenic 30.0%
! AGTGGGAAAGTTGATTTATT+TGG + chr5_4:61556406-61556425 None:intergenic 30.0%
GGGTAAGTATTAAAGATTAG+TGG + chr5_4:61556424-61556443 None:intergenic 30.0%
GGAAAATGCCAACATTTATA+AGG + chr5_4:61556445-61556464 None:intergenic 30.0%
! GAATCACACAATAAGTTTTG+AGG + chr5_4:61556469-61556488 None:intergenic 30.0%
TAACAGGAAACAGGAAAATT+TGG + chr5_4:61556522-61556541 None:intergenic 30.0%
CAAGTATTTCTTGTGAATTG+AGG + chr5_4:61556601-61556620 None:intergenic 30.0%
! ATCATTAGAGTTTGAGATGA+AGG + chr5_4:61556637-61556656 None:intergenic 30.0%
GTTACATGAGACTATATGAT+TGG + chr5_4:61556684-61556703 None:intergenic 30.0%
AGATCACACAAACATTCAAA+AGG + chr5_4:61556751-61556770 None:intergenic 30.0%
!! GCACTGAAGTAGTATTTTTA+AGG + chr5_4:61556941-61556960 None:intergenic 30.0%
! AGTATGTGTCACTAAATCAA+CGG + chr5_4:61557082-61557101 None:intergenic 30.0%
TGACACATACTTGAGAAAAA+TGG - chr5_4:61557091-61557110 Msa0862020:intron 30.0%
TCATGTCTCACTTATATAAG+TGG + chr5_4:61557204-61557223 None:intergenic 30.0%
CTTATATAAGTGAGACATGA+TGG - chr5_4:61557204-61557223 Msa0862020:intron 30.0%
!!! CATGATGGACTAACATATTT+TGG - chr5_4:61557219-61557238 Msa0862020:intron 30.0%
TCAAATGTGTACATTCACTA+TGG + chr5_4:61557294-61557313 None:intergenic 30.0%
ATGTACACATTTGAAAGTTG+AGG - chr5_4:61557300-61557319 Msa0862020:intron 30.0%
CCAATAGAGCATAACATAAA+AGG + chr5_4:61557412-61557431 None:intergenic 30.0%
! CCTTTTATGTTATGCTCTAT+TGG - chr5_4:61557409-61557428 Msa0862020:intron 30.0%
TCTATCCCTCCAATTAAATT+TGG + chr5_4:61557521-61557540 None:intergenic 30.0%
AAGTAAAGGTGGAATATTGT+GGG - chr5_4:61557674-61557693 Msa0862020:intron 30.0%
ACAAAATATAGTTGGATGCT+AGG - chr5_4:61557700-61557719 Msa0862020:intron 30.0%
!!! TCCCTCTTTTTTTCTTCTTT+AGG + chr5_4:61557968-61557987 None:intergenic 30.0%
AAAAAAAGAGGGAACCTTTA+GGG - chr5_4:61557975-61557994 Msa0862020:intron 30.0%
TTAGCCTATTTATTCCCTAA+AGG + chr5_4:61557992-61558011 None:intergenic 30.0%
TTAGGGAATAAATAGGCTAA+AGG - chr5_4:61557992-61558011 Msa0862020:intron 30.0%
AATAAATAGGCTAAAGGTTG+AGG - chr5_4:61557998-61558017 Msa0862020:intron 30.0%
ATAAATAGGCTAAAGGTTGA+GGG - chr5_4:61557999-61558018 Msa0862020:intron 30.0%
AAAACACCATTCAAACATCT+TGG - chr5_4:61558047-61558066 Msa0862020:intron 30.0%
CCGAAAGAGATTCAAAAAAA+TGG - chr5_4:61558097-61558116 Msa0862020:intron 30.0%
AAATTTGGACCGAATTCAAT+AGG - chr5_4:61558242-61558261 Msa0862020:intron 30.0%
AATTTGGACCGAATTCAATA+GGG - chr5_4:61558243-61558262 Msa0862020:intron 30.0%
GATTTCTACCCTATTGAATT+CGG + chr5_4:61558254-61558273 None:intergenic 30.0%
ATGGTGTTTATATGTGAGAA+TGG - chr5_4:61558538-61558557 Msa0862020:intron 30.0%
TGTTTATATGTGAGAATGGT+TGG - chr5_4:61558542-61558561 Msa0862020:intron 30.0%
!! AACCTTTGCTTTTAATCTGA+TGG + chr5_4:61558580-61558599 None:intergenic 30.0%
ATGAGGAATAAAAGAGGAAA+AGG + chr5_4:61558875-61558894 None:intergenic 30.0%
TTAAGGATGAGGAATAAAAG+AGG + chr5_4:61558881-61558900 None:intergenic 30.0%
CGAAATAATAGTTAAGGATG+AGG + chr5_4:61558892-61558911 None:intergenic 30.0%
! TTCGGTTTGATATAGTATGA+AGG - chr5_4:61558908-61558927 Msa0862020:intron 30.0%
! TCGGTTTGATATAGTATGAA+GGG - chr5_4:61558909-61558928 Msa0862020:intron 30.0%
ACTTCCTTATACAATTCAGT+TGG + chr5_4:61559212-61559231 None:intergenic 30.0%
ATTGAGAAACCTTAGTTGTT+GGG + chr5_4:61559246-61559265 None:intergenic 30.0%
AATTGAGAAACCTTAGTTGT+TGG + chr5_4:61559247-61559266 None:intergenic 30.0%
! AGTTGGGATATGTTTTCATT+AGG - chr5_4:61559339-61559358 Msa0862020:intron 30.0%
! GTTGGGATATGTTTTCATTA+GGG - chr5_4:61559340-61559359 Msa0862020:intron 30.0%
! TTGGGATATGTTTTCATTAG+GGG - chr5_4:61559341-61559360 Msa0862020:intron 30.0%
!! TTTTGAAGGGTTAAACTTAG+AGG - chr5_4:61559379-61559398 Msa0862020:intron 30.0%
TTTGAAGGGTTAAACTTAGA+GGG - chr5_4:61559380-61559399 Msa0862020:intron 30.0%
GTATGCACTATATGATCATT+TGG - chr5_4:61559461-61559480 Msa0862020:intron 30.0%
ATAAATCAATAGCACACACA+AGG + chr5_4:61559503-61559522 None:intergenic 30.0%
! GCTCATATAAATGCTTTGTT+TGG - chr5_4:61559929-61559948 Msa0862020:intron 30.0%
!! GCTTTGTTTGGTAAAAATAG+TGG - chr5_4:61559941-61559960 Msa0862020:intron 30.0%
AGCTATAAGCTATCAGTTAT+CGG + chr5_4:61559990-61560009 None:intergenic 30.0%
! ACTATCTTTTACTCAACCAT+TGG + chr5_4:61560141-61560160 None:intergenic 30.0%
CAACTTAAAATGAGTTTGTG+GGG + chr5_4:61560258-61560277 None:intergenic 30.0%
CTCAACTTAAAATGAGTTTG+TGG + chr5_4:61560260-61560279 None:intergenic 30.0%
! TCAATTTGTGCACATTGTTT+TGG + chr5_4:61560397-61560416 None:intergenic 30.0%
!!! CAGCTTCCTTCAATTTTTTT+AGG + chr5_4:61560426-61560445 None:intergenic 30.0%
! AGATCAATATTTTCTGACGA+AGG + chr5_4:61560482-61560501 None:intergenic 30.0%
GTTCCAAAAATTTATAGAGG+AGG + chr5_4:61560634-61560653 None:intergenic 30.0%
! ATTCACATTCCCTCATTTTA+GGG + chr5_4:61561008-61561027 None:intergenic 30.0%
! TATTCACATTCCCTCATTTT+AGG + chr5_4:61561009-61561028 None:intergenic 30.0%
! CTTTATGATTTTCTGTCTTC+TGG + chr5_4:61561033-61561052 None:intergenic 30.0%
ACGCACAAATTCACATATAT+TGG - chr5_4:61561119-61561138 Msa0862020:intron 30.0%
CGCACAAATTCACATATATT+GGG - chr5_4:61561120-61561139 Msa0862020:intron 30.0%
!! TTAAAGAATCTTTGGGATCT+CGG + chr5_4:61561193-61561212 None:intergenic 30.0%
TTAAAATTCAGCCCTTAAAG+AGG - chr5_4:61561209-61561228 Msa0862020:intron 30.0%
TCAAATGTATGTAGAGTCAT+TGG + chr5_4:61561381-61561400 None:intergenic 30.0%
TACATTTGATCATTTCAACC+AGG - chr5_4:61561392-61561411 Msa0862020:intron 30.0%
TTGTAAGGTCTAGAAATAAG+TGG + chr5_4:61561481-61561500 None:intergenic 30.0%
CATCGTTAGAAAGTAAATGT+GGG - chr5_4:61561502-61561521 Msa0862020:intron 30.0%
TAAATGTGGGAAAAAGAAGA+AGG - chr5_4:61561515-61561534 Msa0862020:intron 30.0%
!! TTTCTCATTGAGTTTGTTGT+CGG + chr5_4:61561810-61561829 None:intergenic 30.0%
TTGTCAAGAATTTCGAAACA+AGG - chr5_4:61561847-61561866 Msa0862020:intron 30.0%
TCAATTGAAACCAAATTGCA+AGG - chr5_4:61561870-61561889 Msa0862020:intron 30.0%
CAATTGAAACCAAATTGCAA+GGG - chr5_4:61561871-61561890 Msa0862020:intron 30.0%
! GTTAAAAGAGATGATGGTAA+AGG - chr5_4:61561893-61561912 Msa0862020:intron 30.0%
GATGACAATGTGGTTTATAT+TGG - chr5_4:61561917-61561936 Msa0862020:intron 30.0%
!!! TATTGTTTGGGTTTTGTTGA+CGG + chr5_4:61562047-61562066 None:intergenic 30.0%
AACCCGTGATTTATATGATA+TGG - chr5_4:61562269-61562288 Msa0862020:intron 30.0%
ACCCGTGATTTATATGATAT+GGG - chr5_4:61562270-61562289 Msa0862020:intron 30.0%
ACCCATATCATATAAATCAC+GGG + chr5_4:61562274-61562293 None:intergenic 30.0%
! AGAATCATGTTTTACACAGA+AGG - chr5_4:61562396-61562415 Msa0862020:intron 30.0%
! GAATCATGTTTTACACAGAA+GGG - chr5_4:61562397-61562416 Msa0862020:intron 30.0%
TCAAAAGAGGTAGAAAATCT+GGG - chr5_4:61562444-61562463 Msa0862020:intron 30.0%
! CAATGAGTTGAATCCAAATA+TGG - chr5_4:61562505-61562524 Msa0862020:intron 30.0%
GCTCTATCATAAACCATATT+TGG + chr5_4:61562521-61562540 None:intergenic 30.0%
!! GCTTACACATGCTTTAATTT+TGG - chr5_4:61562771-61562790 Msa0862020:intron 30.0%
!!! AAAACACAGATATTTTGGTC+CGG + chr5_4:61562829-61562848 None:intergenic 30.0%
! CATTCACTTCTGAACTTTTA+AGG - chr5_4:61562866-61562885 Msa0862020:intron 30.0%
!!! TGATTTCCTTTTTTGGCATA+TGG + chr5_4:61562926-61562945 None:intergenic 30.0%
!!! TCTAGCATGATTTCCTTTTT+TGG + chr5_4:61562933-61562952 None:intergenic 30.0%
! GAACAAGCATTTAAAGCAAA+AGG - chr5_4:61562959-61562978 Msa0862020:intron 30.0%
ACCAAGCTAAAAGAAAAAAG+TGG - chr5_4:61563059-61563078 Msa0862020:intron 30.0%
!!! ACCACTTTTTTCTTTTAGCT+TGG + chr5_4:61563063-61563082 None:intergenic 30.0%
GTTACGTTAAGTTCTATCTT+TGG - chr5_4:61563100-61563119 Msa0862020:intron 30.0%
TACGTTAAGTTCTATCTTTG+GGG - chr5_4:61563102-61563121 Msa0862020:intron 30.0%
GATTAGTGAATACTGTAACA+AGG + chr5_4:61563345-61563364 None:intergenic 30.0%
!!! AAATAGGTTTGGTGTTTTTC+AGG - chr5_4:61563472-61563491 Msa0862020:intron 30.0%
ATCCCAATTCAATTAGGAAA+TGG + chr5_4:61563501-61563520 None:intergenic 30.0%
ATGCAAAGACAATTTCAACT+TGG + chr5_4:61563619-61563638 None:intergenic 30.0%
GAAATTGTCTTTGCATTAGA+TGG - chr5_4:61563623-61563642 Msa0862020:intron 30.0%
! ACATTTAGAACATCTATAGG+AGG - chr5_4:61563755-61563774 Msa0862020:intron 30.0%
! CATTTAGAACATCTATAGGA+GGG - chr5_4:61563756-61563775 Msa0862020:intron 30.0%
! ATTTAGAACATCTATAGGAG+GGG - chr5_4:61563757-61563776 Msa0862020:intron 30.0%
TAATATTGATGTCATTGGCA+TGG - chr5_4:61563807-61563826 Msa0862020:intron 30.0%
AATATTGATGTCATTGGCAT+GGG - chr5_4:61563808-61563827 Msa0862020:intron 30.0%
!! ATTTTCAAGAAAGGAAAGGG+GGG + chr5_4:61549495-61549514 None:intergenic 35.0%
!! TGTGGCTGAATTTTCAAGAA+AGG + chr5_4:61549504-61549523 None:intergenic 35.0%
AGAAAGAAAACATGAGAGGA+AGG + chr5_4:61549576-61549595 None:intergenic 35.0%
! ATTTTGTTGAGTAGTGAGTG+TGG + chr5_4:61549667-61549686 None:intergenic 35.0%
!!! TTAGCTTTATGGGTTTTGGT+GGG + chr5_4:61549695-61549714 None:intergenic 35.0%
!!! ATTAGCTTTATGGGTTTTGG+TGG + chr5_4:61549696-61549715 None:intergenic 35.0%
!!! GGAATTAGCTTTATGGGTTT+TGG + chr5_4:61549699-61549718 None:intergenic 35.0%
! ATTTTGTGTGATGCTGAAGT+TGG - chr5_4:61550060-61550079 Msa0862020:intron 35.0%
TTATTAAAGCCGTACGTACT+TGG + chr5_4:61550133-61550152 None:intergenic 35.0%
GATATTTCATGCGGGAAAAT+AGG - chr5_4:61550242-61550261 Msa0862020:CDS 35.0%
TTACCATGTAGAAGATGGAT+TGG - chr5_4:61550310-61550329 Msa0862020:intron 35.0%
!! AGATGGATTGGCTATATAGA+AGG - chr5_4:61550322-61550341 Msa0862020:intron 35.0%
ATTCGTAATTAGCTACGAAC+GGG - chr5_4:61550514-61550533 Msa0862020:intron 35.0%
! TTTTTCTTCTAACACCTTGG+AGG - chr5_4:61550542-61550561 Msa0862020:intron 35.0%
!!! CAATCAAAGCGATTTTTTGG+AGG - chr5_4:61550583-61550602 Msa0862020:intron 35.0%
!! GTTTCTAGCTAGGAACAAAA+AGG - chr5_4:61550608-61550627 Msa0862020:intron 35.0%
! TTCTAGCTAGGAACAAAAAG+GGG - chr5_4:61550610-61550629 Msa0862020:intron 35.0%
TTATTAAAGCCGTACGTACT+TGG + chr5_4:61550133-61550152 None:intergenic 35.0%
! TTTATGCTTCATTTCTGGGT+TGG - chr5_4:61551127-61551146 Msa0862020:intron 35.0%
GTAAGATGGAATGGCTATAT+AGG - chr5_4:61551448-61551467 Msa0862020:intron 35.0%
! CTTGATAATTGAAGAGGTAG+GGG + chr5_4:61552201-61552220 None:intergenic 35.0%
! GCTTGATAATTGAAGAGGTA+GGG + chr5_4:61552202-61552221 None:intergenic 35.0%
! TGCTTGATAATTGAAGAGGT+AGG + chr5_4:61552203-61552222 None:intergenic 35.0%
TACCTCTTCAATTATCAAGC+AGG - chr5_4:61552202-61552221 Msa0862020:intron 35.0%
! ATCCTGCTTGATAATTGAAG+AGG + chr5_4:61552207-61552226 None:intergenic 35.0%
GAGTTAACAACTACTATGAG+CGG + chr5_4:61552520-61552539 None:intergenic 35.0%
AAAAATTTGGGTGTCTGCTT+TGG - chr5_4:61553018-61553037 Msa0862020:intron 35.0%
ACATTTCTCATAGTAAGGGA+CGG + chr5_4:61553055-61553074 None:intergenic 35.0%
TGATTCCTTTCTCGGATATT+AGG - chr5_4:61553190-61553209 Msa0862020:intron 35.0%
ACTTTCCTAATATCCGAGAA+AGG + chr5_4:61553198-61553217 None:intergenic 35.0%
ACAAACTCAATGGTATCAAG+GGG + chr5_4:61554032-61554051 None:intergenic 35.0%
ATTGGGTCAAAAATGGCTTT+AGG + chr5_4:61554191-61554210 None:intergenic 35.0%
! GATTGAGTCAAAATTGGTCT+TGG - chr5_4:61554241-61554260 Msa0862020:intron 35.0%
!! TTGAGTCAAAATTGGTCTTG+GGG - chr5_4:61554243-61554262 Msa0862020:intron 35.0%
! CCTAAGTATCACGATCTTTT+TGG + chr5_4:61554331-61554350 None:intergenic 35.0%
CCAAAAAGATCGTGATACTT+AGG - chr5_4:61554328-61554347 Msa0862020:intron 35.0%
AAAAGATCGTGATACTTAGG+GGG - chr5_4:61554331-61554350 Msa0862020:intron 35.0%
GACTCTTAATTCAGTTTCGA+GGG + chr5_4:61554466-61554485 None:intergenic 35.0%
AACTGAATTAAGAGTCGAGA+TGG - chr5_4:61554470-61554489 Msa0862020:intron 35.0%
GGAACTTTCATAACCAATTG+TGG + chr5_4:61554556-61554575 None:intergenic 35.0%
CAATTGGTTATGAAAGTTCC+GGG - chr5_4:61554556-61554575 Msa0862020:intron 35.0%
AATTGGTTATGAAAGTTCCG+GGG - chr5_4:61554557-61554576 Msa0862020:intron 35.0%
CTAATCAGTATGTGTGACTT+TGG + chr5_4:61554667-61554686 None:intergenic 35.0%
GCTAAAAAGAATCACCACAA+TGG - chr5_4:61554686-61554705 Msa0862020:intron 35.0%
TCATACTTCAATCCGTTGTT+TGG + chr5_4:61555198-61555217 None:intergenic 35.0%
CTATCTGTTCATCATATGGA+GGG - chr5_4:61555281-61555300 Msa0862020:intron 35.0%
TTCATGTTTCACATCAGTGA+AGG - chr5_4:61555458-61555477 Msa0862020:intron 35.0%
! GTGCATCATTTTCTTCAGTT+TGG + chr5_4:61555549-61555568 None:intergenic 35.0%
! TTTTCTACAAGGTGTACAAC+TGG + chr5_4:61555605-61555624 None:intergenic 35.0%
! TATCGGCCTAATTTTCTACA+AGG + chr5_4:61555616-61555635 None:intergenic 35.0%
CAAAAGCTATTGCGTTCAAA+TGG - chr5_4:61555661-61555680 Msa0862020:intron 35.0%
ATATCTAGTCACCAACTTGA+GGG + chr5_4:61555784-61555803 None:intergenic 35.0%
AATATCTAGTCACCAACTTG+AGG + chr5_4:61555785-61555804 None:intergenic 35.0%
! AGTCAGATTAGTTGCAAGTT+AGG + chr5_4:61555815-61555834 None:intergenic 35.0%
AACAAAGAGAAGTTGCATAG+TGG + chr5_4:61555917-61555936 None:intergenic 35.0%
GGTTACTATATTGTCTTGTG+TGG + chr5_4:61556165-61556184 None:intergenic 35.0%
TATGCATGTTCATTGAGTGA+TGG + chr5_4:61556201-61556220 None:intergenic 35.0%
AGGTTGAAGTCTAACTATAG+AGG + chr5_4:61556241-61556260 None:intergenic 35.0%
AATTCATGCATGATCTGAAG+GGG + chr5_4:61556338-61556357 None:intergenic 35.0%
CAATTCATGCATGATCTGAA+GGG + chr5_4:61556339-61556358 None:intergenic 35.0%
TCAATTCATGCATGATCTGA+AGG + chr5_4:61556340-61556359 None:intergenic 35.0%
!!! TCACACAATAAGTTTTGAGG+AGG + chr5_4:61556466-61556485 None:intergenic 35.0%
TATTGTGTGATTCTCCTCAA+TGG - chr5_4:61556476-61556495 Msa0862020:intron 35.0%
ATTGTGTGATTCTCCTCAAT+GGG - chr5_4:61556477-61556496 Msa0862020:intron 35.0%
! TTTGAGCTTTAACAGGAAAC+AGG + chr5_4:61556531-61556550 None:intergenic 35.0%
! CTATGTGTTTGAGCTTTAAC+AGG + chr5_4:61556538-61556557 None:intergenic 35.0%
AAACACATAGTTCCTTTGAG+AGG - chr5_4:61556548-61556567 Msa0862020:intron 35.0%
! AACACATAGTTCCTTTGAGA+GGG - chr5_4:61556549-61556568 Msa0862020:intron 35.0%
! AGAAATACTTGAGTTGCTCA+AGG - chr5_4:61556610-61556629 Msa0862020:intron 35.0%
TCACACAAACATTCAAAAGG+AGG + chr5_4:61556748-61556767 None:intergenic 35.0%
AAAAAGGCAATTGTGTGCTT+GGG + chr5_4:61556792-61556811 None:intergenic 35.0%
AAAAAAGGCAATTGTGTGCT+TGG + chr5_4:61556793-61556812 None:intergenic 35.0%
AATCTTCCAAAACATAGTCG+AGG - chr5_4:61556813-61556832 Msa0862020:intron 35.0%
! CGTTTGAAGAAGGTCTTATA+TGG + chr5_4:61556852-61556871 None:intergenic 35.0%
! GTAAGCTTTGATCTCACAAA+TGG + chr5_4:61556891-61556910 None:intergenic 35.0%
TGTGAGATCAAAGCTTACAA+AGG - chr5_4:61556893-61556912 Msa0862020:intron 35.0%
CAACGATCTGAACAATGAAA+AGG - chr5_4:61556990-61557009 Msa0862020:intron 35.0%
! CACTCTTCTTTTCTCTCTTT+TGG - chr5_4:61557124-61557143 Msa0862020:intron 35.0%
! TGGCTTTTCTTCACATAAGA+AGG - chr5_4:61557239-61557258 Msa0862020:intron 35.0%
! GGCTTTTCTTCACATAAGAA+GGG - chr5_4:61557240-61557259 Msa0862020:intron 35.0%
! TCACATTGTTGTTGGGTATT+GGG + chr5_4:61557268-61557287 None:intergenic 35.0%
! TTCACATTGTTGTTGGGTAT+TGG + chr5_4:61557269-61557288 None:intergenic 35.0%
! ATGGCTTTCACATTGTTGTT+GGG + chr5_4:61557275-61557294 None:intergenic 35.0%
TATGGCTTTCACATTGTTGT+TGG + chr5_4:61557276-61557295 None:intergenic 35.0%
AGAGAGGAACAATACAACTA+AGG - chr5_4:61557383-61557402 Msa0862020:intron 35.0%
AATTCTTGAAGAGGACAGAT+AGG - chr5_4:61557441-61557460 Msa0862020:intron 35.0%
AGAGTTGCCTAAAAATCCTA+AGG - chr5_4:61557601-61557620 Msa0862020:intron 35.0%
! CCAACTACCTTAGGATTTTT+AGG + chr5_4:61557611-61557630 None:intergenic 35.0%
CCTAAAAATCCTAAGGTAGT+TGG - chr5_4:61557608-61557627 Msa0862020:intron 35.0%
AAAAATCCTAAGGTAGTTGG+AGG - chr5_4:61557611-61557630 Msa0862020:intron 35.0%
! GGTGGAAGACATTATGATTT+TGG - chr5_4:61557649-61557668 Msa0862020:intron 35.0%
!! TGATTTTGGAGAAGTAAAGG+TGG - chr5_4:61557663-61557682 Msa0862020:intron 35.0%
GAAGTAAAGGTGGAATATTG+TGG - chr5_4:61557673-61557692 Msa0862020:intron 35.0%
GTGGGACTACAAAATATAGT+TGG - chr5_4:61557692-61557711 Msa0862020:intron 35.0%
TTATTACACGATGTGTCTGA+TGG - chr5_4:61557810-61557829 Msa0862020:intron 35.0%
GAGGGATGAATCCTATAAAT+AGG - chr5_4:61557902-61557921 Msa0862020:intron 35.0%
AATCCTATAAATAGGCAGCT+CGG - chr5_4:61557910-61557929 Msa0862020:intron 35.0%
GAAAAAAAGAGGGAACCTTT+AGG - chr5_4:61557974-61557993 Msa0862020:intron 35.0%
! GGAACCTTTAGGGAATAAAT+AGG - chr5_4:61557985-61558004 Msa0862020:intron 35.0%
!!! GGTTTTTGGGATAGATTCTA+GGG - chr5_4:61558020-61558039 Msa0862020:intron 35.0%
TCACATCCAAGATGTTTGAA+TGG + chr5_4:61558056-61558075 None:intergenic 35.0%
GTGAAATCATTGAGTCTCTT+TGG - chr5_4:61558072-61558091 Msa0862020:intron 35.0%
TCCAAATTTGACCTTCTTTG+GGG + chr5_4:61558231-61558250 None:intergenic 35.0%
GTCCAAATTTGACCTTCTTT+GGG + chr5_4:61558232-61558251 None:intergenic 35.0%
GAAATCATGTCTCTTGTTGA+AGG - chr5_4:61558268-61558287 Msa0862020:intron 35.0%
TATGGCATATCACATGAGAA+TGG - chr5_4:61558519-61558538 Msa0862020:intron 35.0%
AGCCATCAGATTAAAAGCAA+AGG - chr5_4:61558575-61558594 Msa0862020:intron 35.0%
!!! TGAGTTGTTTTGGTGATGTT+TGG + chr5_4:61558811-61558830 None:intergenic 35.0%
AACATCACCAAAACAACTCA+AGG - chr5_4:61558811-61558830 Msa0862020:intron 35.0%
ACATCACCAAAACAACTCAA+GGG - chr5_4:61558812-61558831 Msa0862020:intron 35.0%
!! GTAAATCCCTTGAGTTGTTT+TGG + chr5_4:61558821-61558840 None:intergenic 35.0%
! GTATGAAGGGCATAATTACA+AGG - chr5_4:61558922-61558941 Msa0862020:intron 35.0%
!! GTTTATCCAATTTGGTGATG+TGG + chr5_4:61558965-61558984 None:intergenic 35.0%
TTGCAGAGGTTTATCCAATT+TGG + chr5_4:61558973-61558992 None:intergenic 35.0%
CATGCCAACTGAATTGTATA+AGG - chr5_4:61559205-61559224 Msa0862020:intron 35.0%
ATGATACAACCCAACAACTA+AGG - chr5_4:61559234-61559253 Msa0862020:intron 35.0%
TAAGGCTTGTGCATAAAAGT+TGG - chr5_4:61559322-61559341 Msa0862020:intron 35.0%
AAGGCTTGTGCATAAAAGTT+GGG - chr5_4:61559323-61559342 Msa0862020:intron 35.0%
! TGGGATATGTTTTCATTAGG+GGG - chr5_4:61559342-61559361 Msa0862020:intron 35.0%
! ATGAAGAGTGAGGATTTTGA+AGG - chr5_4:61559365-61559384 Msa0862020:intron 35.0%
! TGAAGAGTGAGGATTTTGAA+GGG - chr5_4:61559366-61559385 Msa0862020:intron 35.0%
TTGAAGGGTTAAACTTAGAG+GGG - chr5_4:61559381-61559400 Msa0862020:intron 35.0%
TTGGAGAAAACTCTTGAATC+AGG - chr5_4:61559413-61559432 Msa0862020:intron 35.0%
!!! GTTATAAGTGGTTTTGGAGT+AGG + chr5_4:61559793-61559812 None:intergenic 35.0%
AAAAAGATCTAACAACTCGG+TGG - chr5_4:61560338-61560357 Msa0862020:intron 35.0%
CGCAGACCTAAAAAAATTGA+AGG - chr5_4:61560417-61560436 Msa0862020:intron 35.0%
ATCGATCTTGTTGAAGAAGA+TGG - chr5_4:61560535-61560554 Msa0862020:intron 35.0%
GGCATCATTGTTGAAAAACA+TGG - chr5_4:61560580-61560599 Msa0862020:intron 35.0%
!! TGCTTTAGAGATAGCAATGA+CGG + chr5_4:61560607-61560626 None:intergenic 35.0%
TCTATTAGCAAAGTGTGCTT+TGG + chr5_4:61560701-61560720 None:intergenic 35.0%
GAGAAAGGTAGTATTACATG+AGG + chr5_4:61560772-61560791 None:intergenic 35.0%
ATACTACCTTTCTCCTAAGT+AGG - chr5_4:61560778-61560797 Msa0862020:intron 35.0%
ACTTAACCTACTTAGGAGAA+AGG + chr5_4:61560787-61560806 None:intergenic 35.0%
! TCTTTCTAGCAATAATTGGC+AGG - chr5_4:61560818-61560837 Msa0862020:intron 35.0%
! GTACTAAAGCAAAGTGTCAA+TGG + chr5_4:61560876-61560895 None:intergenic 35.0%
!! TCATTTTAGGGGGGAAAATA+TGG + chr5_4:61560996-61561015 None:intergenic 35.0%
! ATATTTTCCCCCCTAAAATG+AGG - chr5_4:61560995-61561014 Msa0862020:intron 35.0%
! TATTTTCCCCCCTAAAATGA+GGG - chr5_4:61560996-61561015 Msa0862020:intron 35.0%
! TTCACATTCCCTCATTTTAG+GGG + chr5_4:61561007-61561026 None:intergenic 35.0%
! ACATACTCTATTTGTTAGGC+TGG + chr5_4:61561060-61561079 None:intergenic 35.0%
TATATGTGAATTTGTGCGTG+AGG + chr5_4:61561118-61561137 None:intergenic 35.0%
TAGAGTTTCGTATTTGACAC+GGG + chr5_4:61561157-61561176 None:intergenic 35.0%
GTAGAGTTTCGTATTTGACA+CGG + chr5_4:61561158-61561177 None:intergenic 35.0%
ATTGTGTCCATCCTCTTTAA+GGG + chr5_4:61561223-61561242 None:intergenic 35.0%
TATTGTGTCCATCCTCTTTA+AGG + chr5_4:61561224-61561243 None:intergenic 35.0%
!! TTTTGGCATGTCATTTGTGA+GGG + chr5_4:61561249-61561268 None:intergenic 35.0%
!! TTTTTGGCATGTCATTTGTG+AGG + chr5_4:61561250-61561269 None:intergenic 35.0%
TCACAAATGACATGCCAAAA+AGG - chr5_4:61561249-61561268 Msa0862020:intron 35.0%
! TTGGAGGCATATTGATTAGA+GGG + chr5_4:61561311-61561330 None:intergenic 35.0%
! TTTGGAGGCATATTGATTAG+AGG + chr5_4:61561312-61561331 None:intergenic 35.0%
ACTTTCTAACGATGCTTGTA+AGG + chr5_4:61561496-61561515 None:intergenic 35.0%
GCATCGTTAGAAAGTAAATG+TGG - chr5_4:61561501-61561520 Msa0862020:intron 35.0%
! CTTTTATTCAAGCAACCTCA+AGG - chr5_4:61561575-61561594 Msa0862020:intron 35.0%
! CTCTTTTAACCCTTGCAATT+TGG + chr5_4:61561883-61561902 None:intergenic 35.0%
AAAATTCAATTGGCACTCCA+AGG - chr5_4:61562135-61562154 Msa0862020:intron 35.0%
CAAGAACACTCTTGGAAAAT+TGG - chr5_4:61562199-61562218 Msa0862020:intron 35.0%
GTCAAAAGAGGTAGAAAATC+TGG - chr5_4:61562443-61562462 Msa0862020:intron 35.0%
! TGGTTTATGATAGAGCACTA+TGG - chr5_4:61562525-61562544 Msa0862020:intron 35.0%
CTATGTACATGGCCAAATTA+TGG - chr5_4:61562736-61562755 Msa0862020:intron 35.0%
AAAGGAAATCATGCTAGAAG+AGG - chr5_4:61562935-61562954 Msa0862020:intron 35.0%
ACAGCTGCTTACATTATTCA+TGG + chr5_4:61563167-61563186 None:intergenic 35.0%
AATGTAAGCAGCTGTAATAG+TGG - chr5_4:61563172-61563191 Msa0862020:intron 35.0%
AGGAATCATCTTCAAGAGAA+GGG + chr5_4:61563198-61563217 None:intergenic 35.0%
TAACTTAAGAGATGTGTCAG+AGG + chr5_4:61563218-61563237 None:intergenic 35.0%
TCTGACACATCTCTTAAGTT+AGG - chr5_4:61563217-61563236 Msa0862020:intron 35.0%
CTGACACATCTCTTAAGTTA+GGG - chr5_4:61563218-61563237 Msa0862020:intron 35.0%
TCCTAATTGAATTGGGATGA+TGG - chr5_4:61563503-61563522 Msa0862020:intron 35.0%
CCTAATTGAATTGGGATGAT+GGG - chr5_4:61563504-61563523 Msa0862020:intron 35.0%
CTAATTGAATTGGGATGATG+GGG - chr5_4:61563505-61563524 Msa0862020:intron 35.0%
ATATTGATGTCATTGGCATG+GGG - chr5_4:61563809-61563828 Msa0862020:intron 35.0%
!! TTTTCAAGAAAGGAAAGGGG+GGG + chr5_4:61549494-61549513 None:intergenic 40.0%
CAAACCTGATTAGAATGGTG+TGG + chr5_4:61549522-61549541 None:intergenic 40.0%
GAAAACATGAGAGGAAGGTA+CGG + chr5_4:61549571-61549590 None:intergenic 40.0%
GTAGAGAAAGATTAATGGCG+AGG - chr5_4:61549938-61549957 Msa0862020:intron 40.0%
! ACGTTTTCGAAGAGAAGAAG+AGG - chr5_4:61550009-61550028 Msa0862020:intron 40.0%
! CGTTTTCGAAGAGAAGAAGA+GGG - chr5_4:61550010-61550029 Msa0862020:intron 40.0%
ATGCAAGTTCCAAGTACGTA+CGG - chr5_4:61550121-61550140 Msa0862020:intron 40.0%
TAGCCAATCCATCTTCTACA+TGG + chr5_4:61550316-61550335 None:intergenic 40.0%
!! GGATTGGCTATATAGAAGGT+AGG - chr5_4:61550326-61550345 Msa0862020:intron 40.0%
TTCGTAATTAGCTACGAACG+GGG - chr5_4:61550515-61550534 Msa0862020:intron 40.0%
!!! TCAAAGCGATTTTTTGGAGG+TGG - chr5_4:61550586-61550605 Msa0862020:intron 40.0%
!!! TATTTTTGGAGGTGTAAGGG+TGG - chr5_4:61551347-61551366 Msa0862020:intron 40.0%
GGTGGTTATGATATGACATG+CGG - chr5_4:61551365-61551384 Msa0862020:intron 40.0%
GTGGTTATGATATGACATGC+GGG - chr5_4:61551366-61551385 Msa0862020:intron 40.0%
AGATGGAATGGCTATATAGG+AGG - chr5_4:61551451-61551470 Msa0862020:intron 40.0%
TAGTTCAAAACTGCTAGTGC+AGG - chr5_4:61552162-61552181 Msa0862020:intron 40.0%
GCACGTTAAATGTTGTGAAG+TGG + chr5_4:61552787-61552806 None:intergenic 40.0%
CACTGTCTTGATTCCTTTCT+CGG - chr5_4:61553182-61553201 Msa0862020:intron 40.0%
!! TCTTACACAACCGACTTGTA+AGG + chr5_4:61553735-61553754 None:intergenic 40.0%
! ATGCCATATTTTATCGGGCT+TGG + chr5_4:61553865-61553884 None:intergenic 40.0%
CTTACACAACCCCACAAAAT+TGG + chr5_4:61553929-61553948 None:intergenic 40.0%
GCAAGATCGTGATACTTAGA+GGG + chr5_4:61554097-61554116 None:intergenic 40.0%
! GTATCACGATCTTGCGATTT+TGG - chr5_4:61554102-61554121 Msa0862020:intron 40.0%
TGCAAAAGGGGCAATACTTA+GGG + chr5_4:61554160-61554179 None:intergenic 40.0%
TTAGGAGGCAAACTGCAAAA+GGG + chr5_4:61554173-61554192 None:intergenic 40.0%
TTTAGGAGGCAAACTGCAAA+AGG + chr5_4:61554174-61554193 None:intergenic 40.0%
!! TGCGTTGATTGGGTCAAAAA+TGG + chr5_4:61554198-61554217 None:intergenic 40.0%
!! TGAGTCAAAATTGGTCTTGG+GGG - chr5_4:61554244-61554263 Msa0862020:intron 40.0%
TGCAAAAAGGGCAGTACTTA+GGG - chr5_4:61554274-61554293 Msa0862020:intron 40.0%
CGACTCTTAATTCAGTTTCG+AGG + chr5_4:61554467-61554486 None:intergenic 40.0%
AAGAGTCGAGATGGTACAAA+AGG - chr5_4:61554479-61554498 Msa0862020:intron 40.0%
AGTCACAAAGACACCACAAT+TGG - chr5_4:61554540-61554559 Msa0862020:intron 40.0%
GTGTGCACCAAACATATGAT+AGG + chr5_4:61555053-61555072 None:intergenic 40.0%
!! AGCTTTGGGTGAAACTCTTA+GGG + chr5_4:61555263-61555282 None:intergenic 40.0%
!! TAGCTTTGGGTGAAACTCTT+AGG + chr5_4:61555264-61555283 None:intergenic 40.0%
GCTATCTGTTCATCATATGG+AGG - chr5_4:61555280-61555299 Msa0862020:intron 40.0%
ATGGAGGGAAAATACGAAGT+AGG - chr5_4:61555296-61555315 Msa0862020:intron 40.0%
CATCAGTGAAGGATCTCAAA+CGG - chr5_4:61555469-61555488 Msa0862020:intron 40.0%
TACAAGGTGTACAACTGGTT+GGG + chr5_4:61555600-61555619 None:intergenic 40.0%
GCCCGTTAAGTAAACCTATT+AGG + chr5_4:61555700-61555719 None:intergenic 40.0%
TATCTAGTCACCAACTTGAG+GGG + chr5_4:61555783-61555802 None:intergenic 40.0%
TTGATGTTCGGAAGGAATGT+AGG - chr5_4:61555877-61555896 Msa0862020:intron 40.0%
! AGTGATGGAACAACGACTTT+AGG + chr5_4:61556186-61556205 None:intergenic 40.0%
AATATCTCAAAGCCACGTCA+AGG + chr5_4:61556284-61556303 None:intergenic 40.0%
TTATTTGGCACACACTAGAC+CGG + chr5_4:61556391-61556410 None:intergenic 40.0%
! AGAAAGGCCTTGATTTGAGT+AGG - chr5_4:61556572-61556591 Msa0862020:intron 40.0%
GAATGTTTGTGTGATCTCCT+TGG - chr5_4:61556754-61556773 Msa0862020:intron 40.0%
GTTGTGAATTCGTTAACCGT+TGG + chr5_4:61557060-61557079 None:intergenic 40.0%
! GGTTGAGAAGAGAGTCTTTT+TGG + chr5_4:61557165-61557184 None:intergenic 40.0%
AGTGGAGAGATTTCATGCTA+GGG + chr5_4:61557186-61557205 None:intergenic 40.0%
AAGTGGAGAGATTTCATGCT+AGG + chr5_4:61557187-61557206 None:intergenic 40.0%
AAGTTGAGGTGAAGAAGACT+CGG - chr5_4:61557314-61557333 Msa0862020:intron 40.0%
TGGGAATAGGTGGAAACAAA+TGG - chr5_4:61557360-61557379 Msa0862020:intron 40.0%
! AGGACGGAAATTGATTTCTC+AGG - chr5_4:61557550-61557569 Msa0862020:intron 40.0%
! GGACGGAAATTGATTTCTCA+GGG - chr5_4:61557551-61557570 Msa0862020:intron 40.0%
! GACGGAAATTGATTTCTCAG+GGG - chr5_4:61557552-61557571 Msa0862020:intron 40.0%
! ACGGAAATTGATTTCTCAGG+GGG - chr5_4:61557553-61557572 Msa0862020:intron 40.0%
TGCTAGGTCAAACAACAATG+TGG - chr5_4:61557716-61557735 Msa0862020:intron 40.0%
AGGTCAAACAACAATGTGGT+TGG - chr5_4:61557720-61557739 Msa0862020:intron 40.0%
TCAAACAACAATGTGGTTGG+TGG - chr5_4:61557723-61557742 Msa0862020:intron 40.0%
TGTTACACGAGTCGTGTAAT+AGG + chr5_4:61557881-61557900 None:intergenic 40.0%
ATCCTATAAATAGGCAGCTC+GGG - chr5_4:61557911-61557930 Msa0862020:intron 40.0%
! GCTAAAGGTTGAGGGTTTTT+GGG - chr5_4:61558007-61558026 Msa0862020:intron 40.0%
!!! GGGTTTTTGGGATAGATTCT+AGG - chr5_4:61558019-61558038 Msa0862020:intron 40.0%
TCCCCAAAGAAGGTCAAATT+TGG - chr5_4:61558227-61558246 Msa0862020:intron 40.0%
GGTCCAAATTTGACCTTCTT+TGG + chr5_4:61558233-61558252 None:intergenic 40.0%
GTGAAAAATGGGCAGATGTT+TGG + chr5_4:61558634-61558653 None:intergenic 40.0%
!! ATCCAATTTGGTGATGTGGT+GGG + chr5_4:61558961-61558980 None:intergenic 40.0%
!! TATCCAATTTGGTGATGTGG+TGG + chr5_4:61558962-61558981 None:intergenic 40.0%
! TGGAGTAGGTTTTGCACTTT+CGG + chr5_4:61559779-61559798 None:intergenic 40.0%
CATGAGAATTGAACGTGAGT+TGG - chr5_4:61560509-61560528 Msa0862020:intron 40.0%
!! GCTTTAGAGATAGCAATGAC+GGG + chr5_4:61560606-61560625 None:intergenic 40.0%
!! AGTGTGCTTTGGTGATGATT+TGG + chr5_4:61560690-61560709 None:intergenic 40.0%
! CTCGATTAACTTGGAGTGTA+AGG + chr5_4:61560728-61560747 None:intergenic 40.0%
TGAGGAAACCTCAAAGTGAA+CGG + chr5_4:61560754-61560773 None:intergenic 40.0%
CCACTCAACTTAACCTACTT+AGG + chr5_4:61560794-61560813 None:intergenic 40.0%
!! CCTAAGTAGGTTAAGTTGAG+TGG - chr5_4:61560791-61560810 Msa0862020:intron 40.0%
TATTGGGCAAATTCAGAGGA+TGG + chr5_4:61560973-61560992 None:intergenic 40.0%
! ATGGTATTGGGCAAATTCAG+AGG + chr5_4:61560977-61560996 None:intergenic 40.0%
AGGGGGGAAAATATGGTATT+GGG + chr5_4:61560989-61561008 None:intergenic 40.0%
TAGGGGGGAAAATATGGTAT+TGG + chr5_4:61560990-61561009 None:intergenic 40.0%
! TCACATTCCCTCATTTTAGG+GGG + chr5_4:61561006-61561025 None:intergenic 40.0%
! ACTCTATTTGTTAGGCTGGT+TGG + chr5_4:61561056-61561075 None:intergenic 40.0%
AATTCAGCCCTTAAAGAGGA+TGG - chr5_4:61561213-61561232 Msa0862020:intron 40.0%
ATGACATGCCAAAAAGGAGA+CGG - chr5_4:61561255-61561274 Msa0862020:intron 40.0%
! GAACGAGATATGTCGCATTT+TGG + chr5_4:61561330-61561349 None:intergenic 40.0%
TCATTTCAACCAGGTCAACT+TGG - chr5_4:61561401-61561420 Msa0862020:intron 40.0%
! CAAATAGGGTTTGTTTGGAG+AGG + chr5_4:61561450-61561469 None:intergenic 40.0%
!!! CTCTTTTTCTAGAGTCCTTG+AGG + chr5_4:61561593-61561612 None:intergenic 40.0%
GCAAGGGTTAAAAGAGATGA+TGG - chr5_4:61561887-61561906 Msa0862020:intron 40.0%
TGGTAAAGGAGATGACAATG+TGG - chr5_4:61561907-61561926 Msa0862020:intron 40.0%
CAATTGCAGTGGACGAATAT+AGG + chr5_4:61561975-61561994 None:intergenic 40.0%
!! ATACAAAATCTTTGGGGCTC+AGG - chr5_4:61562004-61562023 Msa0862020:intron 40.0%
!! TTTCCAAGAGTGTTCTTGAG+AGG + chr5_4:61562197-61562216 None:intergenic 40.0%
AACGTAACCATCTGTGAGAA+AGG + chr5_4:61563088-61563107 None:intergenic 40.0%
! TGCTGAGACATTTTCTTGCA+TGG + chr5_4:61563140-61563159 None:intergenic 40.0%
GAGGAATCATCTTCAAGAGA+AGG + chr5_4:61563199-61563218 None:intergenic 40.0%
CCCATCATCCCAATTCAATT+AGG + chr5_4:61563507-61563526 None:intergenic 40.0%
TCAGCCACACCATTCTAATC+AGG - chr5_4:61549515-61549534 Msa0862020:three_prime_UTR 45.0%
GGTACGGAAAGAGAGAGAAA+AGG + chr5_4:61549555-61549574 None:intergenic 45.0%
! TACTGGCCAGATCTGAAACT+AGG - chr5_4:61549771-61549790 Msa0862020:intron 45.0%
! ACTGGCCAGATCTGAAACTA+GGG - chr5_4:61549772-61549791 Msa0862020:intron 45.0%
CCAAACCCTAGTTTCAGATC+TGG + chr5_4:61549780-61549799 None:intergenic 45.0%
! CCAGATCTGAAACTAGGGTT+TGG - chr5_4:61549777-61549796 Msa0862020:intron 45.0%
AGGGATCTTCAAGAAAGCTG+AGG - chr5_4:61550029-61550048 Msa0862020:intron 45.0%
TTCTTCTAACACCTTGGAGG+TGG - chr5_4:61550545-61550564 Msa0862020:intron 45.0%
!! TTTGGAGGTGGTTTCTAGCT+AGG - chr5_4:61550598-61550617 Msa0862020:intron 45.0%
! ATGCTTCATTTCTGGGTTGG+AGG - chr5_4:61551130-61551149 Msa0862020:intron 45.0%
GGAATGGCTATATAGGAGGT+AGG - chr5_4:61551455-61551474 Msa0862020:intron 45.0%
AAAACTGCTAGTGCAGGCAA+GGG - chr5_4:61552168-61552187 Msa0862020:intron 45.0%
GCGTGGATATAAACAGTAGG+TGG + chr5_4:61553841-61553860 None:intergenic 45.0%
GGTGCGTGGATATAAACAGT+AGG + chr5_4:61553844-61553863 None:intergenic 45.0%
GCACCAAGCCCGATAAAATA+TGG - chr5_4:61553859-61553878 Msa0862020:intron 45.0%
CGCAAGATCGTGATACTTAG+AGG + chr5_4:61554098-61554117 None:intergenic 45.0%
AAAAGGGGCAATACTTAGGG+GGG + chr5_4:61554157-61554176 None:intergenic 45.0%
CAAAAGGGGCAATACTTAGG+GGG + chr5_4:61554158-61554177 None:intergenic 45.0%
GCAAAAGGGGCAATACTTAG+GGG + chr5_4:61554159-61554178 None:intergenic 45.0%
CTGCAAAAGGGGCAATACTT+AGG + chr5_4:61554161-61554180 None:intergenic 45.0%
TAGGAGGCAAACTGCAAAAG+GGG + chr5_4:61554172-61554191 None:intergenic 45.0%
!! GGGTCAAAAATGGCTTTAGG+AGG + chr5_4:61554188-61554207 None:intergenic 45.0%
TGGGGGTCAATACTGCAAAA+AGG - chr5_4:61554261-61554280 Msa0862020:intron 45.0%
GGGGGTCAATACTGCAAAAA+GGG - chr5_4:61554262-61554281 Msa0862020:intron 45.0%
CTGCAAAAAGGGCAGTACTT+AGG - chr5_4:61554273-61554292 Msa0862020:intron 45.0%
GCAAAAAGGGCAGTACTTAG+GGG - chr5_4:61554275-61554294 Msa0862020:intron 45.0%
CAAAAAGGGCAGTACTTAGG+GGG - chr5_4:61554276-61554295 Msa0862020:intron 45.0%
AAAAAGGGCAGTACTTAGGG+GGG - chr5_4:61554277-61554296 Msa0862020:intron 45.0%
AGTCGAGATGGTACAAAAGG+TGG - chr5_4:61554482-61554501 Msa0862020:intron 45.0%
AAGGTGGAAGATGCCACAAT+CGG - chr5_4:61554498-61554517 Msa0862020:intron 45.0%
! CTATTCTCTAAGGACCCGTT+TGG - chr5_4:61554869-61554888 Msa0862020:intron 45.0%
AGCATATCCTACGCACCAAA+CGG + chr5_4:61554887-61554906 None:intergenic 45.0%
TGAAACTCTTAGGGGTCGTT+TGG + chr5_4:61555254-61555273 None:intergenic 45.0%
! GCTTTGGGTGAAACTCTTAG+GGG + chr5_4:61555262-61555281 None:intergenic 45.0%
CTACAAGGTGTACAACTGGT+TGG + chr5_4:61555601-61555620 None:intergenic 45.0%
ATCTAGTCACCAACTTGAGG+GGG + chr5_4:61555782-61555801 None:intergenic 45.0%
! CACATCCGTCAGTTGATGTT+CGG - chr5_4:61555865-61555884 Msa0862020:intron 45.0%
TCCTTCCGAACATCAACTGA+CGG + chr5_4:61555873-61555892 None:intergenic 45.0%
TCTTACTCCTCCAAGCAACA+AGG - chr5_4:61556136-61556155 Msa0862020:intron 45.0%
! TTTGGTGTGTGCAATGAGTG+TGG + chr5_4:61556367-61556386 None:intergenic 45.0%
CTCATTGCACACACCAAATC+CGG - chr5_4:61556369-61556388 Msa0862020:intron 45.0%
TCCTCAATGGGAACACTTGT+AGG - chr5_4:61556489-61556508 Msa0862020:intron 45.0%
ACCTACAAGTGTTCCCATTG+AGG + chr5_4:61556493-61556512 None:intergenic 45.0%
! AGTTCCTTTGAGAGGGAGAA+AGG - chr5_4:61556556-61556575 Msa0862020:intron 45.0%
GAGGTAGCCTACTCAAATCA+AGG + chr5_4:61556582-61556601 None:intergenic 45.0%
TTGGGCTATAAGCAAAGCCA+AGG + chr5_4:61556774-61556793 None:intergenic 45.0%
! CAGTTGCCTCGACTATGTTT+TGG + chr5_4:61556822-61556841 None:intergenic 45.0%
!! CAAGGTGTGTCGTTTGAAGA+AGG + chr5_4:61556862-61556881 None:intergenic 45.0%
CTTCAAACGACACACCTTGT+TGG - chr5_4:61556863-61556882 Msa0862020:intron 45.0%
TCTCACAAATGGAGCCAACA+AGG + chr5_4:61556880-61556899 None:intergenic 45.0%
AGAGCAGATTCGCAACACAT+AGG + chr5_4:61557020-61557039 None:intergenic 45.0%
TAAAAACCAGTCCGAGCCAA+CGG - chr5_4:61557041-61557060 Msa0862020:intron 45.0%
! GAATTCGTTAACCGTTGGCT+CGG + chr5_4:61557055-61557074 None:intergenic 45.0%
AGTCTTCCACTAGTGGGAAT+AGG - chr5_4:61557347-61557366 Msa0862020:intron 45.0%
TTTCCACCTATTCCCACTAG+TGG + chr5_4:61557356-61557375 None:intergenic 45.0%
AGGTGGAAACAAATGGAGAG+AGG - chr5_4:61557367-61557386 Msa0862020:intron 45.0%
! AGAAGGCATGGTATGACTTG+TGG - chr5_4:61557481-61557500 Msa0862020:intron 45.0%
! GAAGGCATGGTATGACTTGT+GGG - chr5_4:61557482-61557501 Msa0862020:intron 45.0%
ATTGGAGGGATAGAATCTCC+AGG - chr5_4:61557527-61557546 Msa0862020:intron 45.0%
GAAATCAATTTCCGTCCTCC+TGG + chr5_4:61557548-61557567 None:intergenic 45.0%
AACTTGCCTCCAACTACCTT+AGG + chr5_4:61557620-61557639 None:intergenic 45.0%
TGGAGGCAAGTTCTTCAAGA+AGG - chr5_4:61557628-61557647 Msa0862020:intron 45.0%
AGGCAAGTTCTTCAAGAAGG+TGG - chr5_4:61557631-61557650 Msa0862020:intron 45.0%
!! CAATGTGGTTGGTGGACAAA+TGG - chr5_4:61557731-61557750 Msa0862020:intron 45.0%
ACGAGTCGTGTAATAGGAAG+TGG + chr5_4:61557875-61557894 None:intergenic 45.0%
AACCCGAGCTGCCTATTTAT+AGG + chr5_4:61557916-61557935 None:intergenic 45.0%
AAATAGGCAGCTCGGGTTTA+TGG - chr5_4:61557918-61557937 Msa0862020:intron 45.0%
! GGCTAAAGGTTGAGGGTTTT+TGG - chr5_4:61558006-61558025 Msa0862020:intron 45.0%
TACTTTACCTGCACTTGCAG+AGG + chr5_4:61558987-61559006 None:intergenic 45.0%
CAAGCGTGTGATTGAGATGA+AGG - chr5_4:61559439-61559458 Msa0862020:intron 45.0%
! AATTGGGGCACTTCGAATGA+AGG - chr5_4:61559877-61559896 Msa0862020:intron 45.0%
TTGAAGGAAGCTGAAGCTCT+TGG - chr5_4:61560433-61560452 Msa0862020:intron 45.0%
GAACGGTCTCTCGATTAACT+TGG + chr5_4:61560737-61560756 None:intergenic 45.0%
!! CACATTCCCTCATTTTAGGG+GGG + chr5_4:61561005-61561024 None:intergenic 45.0%
! AGGTAGTTGGACTTGGTAGT+GGG + chr5_4:61561098-61561117 None:intergenic 45.0%
GAATTTGTGCGTGAGGTAGT+TGG + chr5_4:61561111-61561130 None:intergenic 45.0%
TCGTATTTGACACGGGACTT+GGG + chr5_4:61561150-61561169 None:intergenic 45.0%
TTCGTATTTGACACGGGACT+TGG + chr5_4:61561151-61561170 None:intergenic 45.0%
! CGAGATATGTCGCATTTTGG+AGG + chr5_4:61561327-61561346 None:intergenic 45.0%
TTGCTAGCTCATTCTTGTGG+TGG + chr5_4:61561352-61561371 None:intergenic 45.0%
GTCTTGCTAGCTCATTCTTG+TGG + chr5_4:61561355-61561374 None:intergenic 45.0%
! TAGGGTTTGTTTGGAGAGGA+GGG + chr5_4:61561446-61561465 None:intergenic 45.0%
! ATAGGGTTTGTTTGGAGAGG+AGG + chr5_4:61561447-61561466 None:intergenic 45.0%
!! CTTCTAAGGTGAGAGATCCT+TGG + chr5_4:61562155-61562174 None:intergenic 45.0%
TAGCCTCTCAAGAACACTCT+TGG - chr5_4:61562191-61562210 Msa0862020:intron 45.0%
ACACAGAAGGGTAGATCAGA+TGG - chr5_4:61562409-61562428 Msa0862020:intron 45.0%
GACAAGAGTCGTGTCAAAAG+AGG - chr5_4:61562431-61562450 Msa0862020:intron 45.0%
TCTATGTAGTCGACCTCACT+TGG - chr5_4:61562558-61562577 Msa0862020:intron 45.0%
GTGGTTACCTTTCTCACAGA+TGG - chr5_4:61563078-61563097 Msa0862020:intron 45.0%
!!! TTTGTTTATTAATTAATTTT+TGG - chr5_4:61549611-61549630 Msa0862020:three_prime_UTR 5.0%
!! TATAACTTATATATAATTTA+AGG + chr5_4:61551269-61551288 None:intergenic 5.0%
!! TATATTTAATACAAAATAAA+TGG - chr5_4:61552280-61552299 Msa0862020:intron 5.0%
!!! TTATTTTATATAAAAATGTT+AGG - chr5_4:61553550-61553569 Msa0862020:intron 5.0%
!!! TTGTAATTTATTTTTTTTAA+GGG + chr5_4:61554129-61554148 None:intergenic 5.0%
!! ATTAAATTATATTATTCTAA+TGG + chr5_4:61558412-61558431 None:intergenic 5.0%
!! ATTAGAATAATATAATTTAA+TGG - chr5_4:61558411-61558430 Msa0862020:intron 5.0%
AACAGTCTCTTCCACCTCCA+AGG + chr5_4:61550559-61550578 None:intergenic 50.0%
ATGCCAGCTCCAAGTACGTA+CGG - chr5_4:61551028-61551047 Msa0862020:intron 50.0%
CAAAACTGCTAGTGCAGGCA+AGG - chr5_4:61552167-61552186 Msa0862020:intron 50.0%
AATTGAAGAGGTAGGGGCCA+GGG + chr5_4:61552195-61552214 None:intergenic 50.0%
TAATTGAAGAGGTAGGGGCC+AGG + chr5_4:61552196-61552215 None:intergenic 50.0%
!!! ATTTTATCGGGCTTGGTGCG+TGG + chr5_4:61553858-61553877 None:intergenic 50.0%
AGGTGGAAGATGCCACAATC+GGG - chr5_4:61554499-61554518 Msa0862020:intron 50.0%
TTGGATATCCACCCCGATTG+TGG + chr5_4:61554514-61554533 None:intergenic 50.0%
GCATATCCTACGCACCAAAC+GGG + chr5_4:61554886-61554905 None:intergenic 50.0%
CCTATTGGCGCACCAAACAA+CGG - chr5_4:61555183-61555202 Msa0862020:intron 50.0%
TACAACACTCCCCCTCAAGT+TGG - chr5_4:61555770-61555789 Msa0862020:intron 50.0%
! TCCGTCAGTTGATGTTCGGA+AGG - chr5_4:61555869-61555888 Msa0862020:intron 50.0%
TGTGTGGGAACCTTGTTGCT+TGG + chr5_4:61556149-61556168 None:intergenic 50.0%
CAAGAGTCATCTCCTTGACG+TGG - chr5_4:61556269-61556288 Msa0862020:intron 50.0%
AAGGCCTTTCTCCCTCTCAA+AGG + chr5_4:61556563-61556582 None:intergenic 50.0%
AGGTGGAGTCTTCCACTAGT+GGG - chr5_4:61557341-61557360 Msa0862020:intron 50.0%
CTTCCACTAGTGGGAATAGG+TGG - chr5_4:61557350-61557369 Msa0862020:intron 50.0%
TGCGGAGGTTAAAGAAGGCA+TGG - chr5_4:61557469-61557488 Msa0862020:intron 50.0%
GGATAGAATCTCCAGGAGGA+CGG - chr5_4:61557534-61557553 Msa0862020:intron 50.0%
GATTTCTCAGGGGGTTGAAG+AGG - chr5_4:61557562-61557581 Msa0862020:intron 50.0%
!! TGTGGTTGGTGGACAAATGG+TGG - chr5_4:61557734-61557753 Msa0862020:intron 50.0%
CACGATGTGTCTGATGGTTG+CGG - chr5_4:61557816-61557835 Msa0862020:intron 50.0%
ACGATGTGTCTGATGGTTGC+GGG - chr5_4:61557817-61557836 Msa0862020:intron 50.0%
TACACGACTCGTGTAACACG+AGG - chr5_4:61557883-61557902 Msa0862020:intron 50.0%
ACACGACTCGTGTAACACGA+GGG - chr5_4:61557884-61557903 Msa0862020:intron 50.0%
GTCCCACCACATCACCAAAT+TGG - chr5_4:61558956-61558975 Msa0862020:intron 50.0%
GGATAAACCTCTGCAAGTGC+AGG - chr5_4:61558977-61558996 Msa0862020:intron 50.0%
CATTAGGGGGATGAAGAGTG+AGG - chr5_4:61559355-61559374 Msa0862020:intron 50.0%
CTTAGAGGGGTTGCAGCAAT+TGG - chr5_4:61559394-61559413 Msa0862020:intron 50.0%
GAAGAAGATGGCACCGTCAT+TGG - chr5_4:61560547-61560566 Msa0862020:intron 50.0%
!! ACCGTCATTGGTGGTGATGA+CGG - chr5_4:61560559-61560578 Msa0862020:intron 50.0%
TCGAGAGACCGTTCACTTTG+AGG - chr5_4:61560743-61560762 Msa0862020:intron 50.0%
!! ACTTGGTAGTGGGACGTCAA+GGG + chr5_4:61561088-61561107 None:intergenic 50.0%
! GAGGTAGTTGGACTTGGTAG+TGG + chr5_4:61561099-61561118 None:intergenic 50.0%
! AAACGGGTTCCAAGTTGACC+TGG + chr5_4:61561413-61561432 None:intergenic 50.0%
! AGGGTTTGTTTGGAGAGGAG+GGG + chr5_4:61561445-61561464 None:intergenic 50.0%
ATGTAGTCGACCTCACTTGG+TGG - chr5_4:61562561-61562580 Msa0862020:intron 50.0%
TGTAGTCGACCTCACTTGGT+GGG - chr5_4:61562562-61562581 Msa0862020:intron 50.0%
! AAGCCTTATCCCACCAAGTG+AGG + chr5_4:61562574-61562593 None:intergenic 50.0%
! TCACTTGGTGGGATAAGGCT+TGG - chr5_4:61562573-61562592 Msa0862020:intron 50.0%
GGCATGGGGTTTAGCAATTG+TGG - chr5_4:61563823-61563842 Msa0862020:intron 50.0%
AAGCCGTACGTACTTGGAGC+TGG + chr5_4:61551034-61551053 None:intergenic 55.0%
GGGCAATACTTAGGGGGGTT+GGG + chr5_4:61554152-61554171 None:intergenic 55.0%
TGACCCAATCAACGCACACG+TGG - chr5_4:61554202-61554221 Msa0862020:intron 55.0%
!! ACGCCACGTGTGCGTTGATT+GGG + chr5_4:61554208-61554227 None:intergenic 55.0%
! AACGCCACGTGTGCGTTGAT+TGG + chr5_4:61554209-61554228 None:intergenic 55.0%
GGTGGAAGATGCCACAATCG+GGG - chr5_4:61554500-61554519 Msa0862020:intron 55.0%
!! TAAGGACCCGTTTGGTGCGT+AGG - chr5_4:61554877-61554896 Msa0862020:intron 55.0%
!! CCGTTGTTTGGTGCGCCAAT+AGG + chr5_4:61555186-61555205 None:intergenic 55.0%
!! GTCGTTTGGTGCACGAAGAC+AGG + chr5_4:61555240-61555259 None:intergenic 55.0%
! GTGGGAACCTTGTTGCTTGG+AGG + chr5_4:61556146-61556165 None:intergenic 55.0%
GGCACACACTAGACCGGATT+TGG + chr5_4:61556385-61556404 None:intergenic 55.0%
! GGTGAAGAAGACTCGGCTTG+AGG - chr5_4:61557321-61557340 Msa0862020:intron 55.0%
! GAAGAAGACTCGGCTTGAGG+TGG - chr5_4:61557324-61557343 Msa0862020:intron 55.0%
GAGGTGGAGTCTTCCACTAG+TGG - chr5_4:61557340-61557359 Msa0862020:intron 55.0%
CGCAGTGCGGAGGTTAAAGA+AGG - chr5_4:61557464-61557483 Msa0862020:intron 55.0%
GGAGGGATAGAATCTCCAGG+AGG - chr5_4:61557530-61557549 Msa0862020:intron 55.0%
ATGTGTCTGATGGTTGCGGG+AGG - chr5_4:61557820-61557839 Msa0862020:intron 55.0%
! TTGCGGGAGGCATAGCTTGA+AGG - chr5_4:61557833-61557852 Msa0862020:intron 55.0%
! TGCGGGAGGCATAGCTTGAA+GGG - chr5_4:61557834-61557853 Msa0862020:intron 55.0%
GAAGATGGCACCGTCATTGG+TGG - chr5_4:61560550-61560569 Msa0862020:intron 55.0%
GCCGTCATCACCACCAATGA+CGG + chr5_4:61560563-61560582 None:intergenic 55.0%
!! CTTGGTAGTGGGACGTCAAG+GGG + chr5_4:61561087-61561106 None:intergenic 55.0%
!! GACTTGGTAGTGGGACGTCA+AGG + chr5_4:61561089-61561108 None:intergenic 55.0%
GTGCGTGAGGTAGTTGGACT+TGG + chr5_4:61561105-61561124 None:intergenic 55.0%
! GGGTTTGTTTGGAGAGGAGG+GGG + chr5_4:61561444-61561463 None:intergenic 55.0%
TAGGTCACGACTCACGAGAG+AGG + chr5_4:61561956-61561975 None:intergenic 55.0%
! CGACCTCACTTGGTGGGATA+AGG - chr5_4:61562568-61562587 Msa0862020:intron 55.0%
GGGGCAATACTTAGGGGGGT+TGG + chr5_4:61554153-61554172 None:intergenic 60.0%
AGGGCAGTACTTAGGGGGGT+TGG - chr5_4:61554281-61554300 Msa0862020:intron 60.0%
GGGCAGTACTTAGGGGGGTT+GGG - chr5_4:61554282-61554301 Msa0862020:intron 60.0%
GGAAGATGCCACAATCGGGG+TGG - chr5_4:61554503-61554522 Msa0862020:intron 60.0%
!! CGTTAACCGTTGGCTCGGAC+TGG + chr5_4:61557050-61557069 None:intergenic 60.0%
GAGGACAGATAGGCGCAGTG+CGG - chr5_4:61557451-61557470 Msa0862020:intron 60.0%
! GGGAGGCATAGCTTGAAGGG+TGG - chr5_4:61557837-61557856 Msa0862020:intron 60.0%
GGAGCTGCTCTCCCCAAAGA+AGG - chr5_4:61558217-61558236 Msa0862020:intron 60.0%
! CGGGGAGACCGTCTCCTTTT+TGG + chr5_4:61561266-61561285 None:intergenic 60.0%
CTAGTGCAGGCAAGGGACCC+TGG - chr5_4:61552175-61552194 Msa0862020:intron 65.0%
GACAGATAGGCGCAGTGCGG+AGG - chr5_4:61557454-61557473 Msa0862020:intron 65.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 61549439 61563929 61549439 ID=Msa0862020;Name=Msa0862020
chr5_4 mRNA 61549439 61563929 61549439 ID=Msa0862020-mRNA-1;Parent=Msa0862020;Name=Msa0862020-mRNA-1;_AED=0.17;_eAED=0.17;_QI=108|0.85|1|1|0.28|0.25|8|328|193
chr5_4 exon 61549439 61549726 61549439 ID=Msa0862020-mRNA-1:exon:19103;Parent=Msa0862020-mRNA-1
chr5_4 exon 61549816 61549874 61549816 ID=Msa0862020-mRNA-1:exon:19102;Parent=Msa0862020-mRNA-1
chr5_4 exon 61550129 61550271 61550129 ID=Msa0862020-mRNA-1:exon:19101;Parent=Msa0862020-mRNA-1
chr5_4 exon 61553908 61554007 61553908 ID=Msa0862020-mRNA-1:exon:19100;Parent=Msa0862020-mRNA-1
chr5_4 exon 61554113 61554174 61554113 ID=Msa0862020-mRNA-1:exon:19099;Parent=Msa0862020-mRNA-1
chr5_4 exon 61554370 61554445 61554370 ID=Msa0862020-mRNA-1:exon:19098;Parent=Msa0862020-mRNA-1
chr5_4 exon 61563235 61563426 61563235 ID=Msa0862020-mRNA-1:exon:19097;Parent=Msa0862020-mRNA-1
chr5_4 exon 61563832 61563929 61563832 ID=Msa0862020-mRNA-1:exon:19096;Parent=Msa0862020-mRNA-1
chr5_4 five_prime_UTR 61563832 61563929 61563832 ID=Msa0862020-mRNA-1:five_prime_utr;Parent=Msa0862020-mRNA-1
chr5_4 five_prime_UTR 61563417 61563426 61563417 ID=Msa0862020-mRNA-1:five_prime_utr;Parent=Msa0862020-mRNA-1
chr5_4 CDS 61563235 61563416 61563235 ID=Msa0862020-mRNA-1:cds;Parent=Msa0862020-mRNA-1
chr5_4 CDS 61554370 61554445 61554370 ID=Msa0862020-mRNA-1:cds;Parent=Msa0862020-mRNA-1
chr5_4 CDS 61554113 61554174 61554113 ID=Msa0862020-mRNA-1:cds;Parent=Msa0862020-mRNA-1
chr5_4 CDS 61553908 61554007 61553908 ID=Msa0862020-mRNA-1:cds;Parent=Msa0862020-mRNA-1
chr5_4 CDS 61550129 61550271 61550129 ID=Msa0862020-mRNA-1:cds;Parent=Msa0862020-mRNA-1
chr5_4 CDS 61549856 61549874 61549856 ID=Msa0862020-mRNA-1:cds;Parent=Msa0862020-mRNA-1
chr5_4 three_prime_UTR 61549816 61549855 61549816 ID=Msa0862020-mRNA-1:three_prime_utr;Parent=Msa0862020-mRNA-1
chr5_4 three_prime_UTR 61549439 61549726 61549439 ID=Msa0862020-mRNA-1:three_prime_utr;Parent=Msa0862020-mRNA-1
Gene Sequence

>Msa0862020

ATGGCGAGGCAGAAGATAAAGATAAAGAAAATAGATAATGCAACTGCAAGGCAAGTGACGTTTTCGAAGAGAAGAAGAGGGATCTTCAAGAAAGCTGAGGAGCTTTCGATTTTGTGTGATGCTGAAGTTGGTCTTGTTATTTTCTCAACTACTGGGAAATTATATGAATATGCAAGTTCCAATATGAAGGGCATAATTACAAGGTATGATCAGCAGTCCCACCACATCACCAAATTGGATAAACCTCTGCAAGTGCAGGTAGAAAAAAACATGCCAACTGAATTGTATAAGGAAGTTGATGATACAACCCAACAACTAAGGGGGATGAAGAGTGAGGATTTTGAAGGGTTAAACTTAGAGGGGTTGCAGCAATTGGAGAAAACTCTTGAATCAGGACTCAAGCGTGTGATTGAGATGAAGATGGTTACGTTAAGTTCTATCTTTGGGGACTCAGATAGTACCATGCAAGAAAATGTCTCAGCAGAGTCCATGAATAATGTAAGCAGCTGTAATAGTGGCCCTTCTCTTGAAGATGATTCCTCTGACACATCTCTTAAGTTAGGGTTACCATTTCCTAATTGA
Protein sequence

>Msa0862020

MARQKIKIKKIDNATARQVTFSKRRRGIFKKAEELSILCDAEVGLVIFSTTGKLYEYASSNMKGIITRYDQQSHHITKLDKPLQVQVEKNMPTELYKEVDDTTQQLRGMKSEDFEGLNLEGLQQLEKTLESGLKRVIEMKMVTLSSIFGDSDSTMQENVSAESMNNVSSCNSGPSLEDDSSDTSLKLGLPFPN*