Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0084160 | RHN81328.1 | 67.041 | 267 | 39 | 3 | 1 | 220 | 1 | 265 | 6.58e-111 | 328 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0084160 | sp|P16270|LECN_PEA | 44.610 | 269 | 77 | 8 | 1 | 209 | 1 | 257 | 3.54e-57 | 185 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0084160 | A0A396JZ27 | 67.041 | 267 | 39 | 3 | 1 | 220 | 1 | 265 | 3.14e-111 | 328 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0004580 | Msa0084160 | 0.812844 | 3.455776e-51 | -8.615850e-47 |
Msa0012820 | Msa0084160 | 0.831119 | 1.999710e-55 | -8.615850e-47 |
Msa0027860 | Msa0084160 | 0.802984 | 4.327839e-49 | -8.615850e-47 |
Msa0036230 | Msa0084160 | 0.895001 | 1.449773e-75 | -8.615850e-47 |
Msa0036580 | Msa0084160 | 0.831828 | 1.337666e-55 | -8.615850e-47 |
Msa0048950 | Msa0084160 | 0.835221 | 1.904210e-56 | -8.615850e-47 |
Msa0059880 | Msa0084160 | 0.834742 | 2.514311e-56 | -8.615850e-47 |
Msa0061600 | Msa0084160 | 0.839972 | 1.150418e-57 | -8.615850e-47 |
Msa0072030 | Msa0084160 | 0.808922 | 2.440247e-50 | -8.615850e-47 |
Msa0074620 | Msa0084160 | 0.815857 | 7.458286e-52 | -8.615850e-47 |
Msa0084150 | Msa0084160 | 0.876381 | 1.461248e-68 | -8.615850e-47 |
Msa0084160 | Msa0093530 | 0.820808 | 5.640477e-53 | -8.615850e-47 |
Msa0084160 | Msa0102930 | 0.801326 | 9.490522e-49 | -8.615850e-47 |
Msa0084160 | Msa0106120 | 0.802512 | 5.417554e-49 | -8.615850e-47 |
Msa0084160 | Msa0106130 | 0.837775 | 4.260741e-57 | -8.615850e-47 |
Msa0084160 | Msa0126960 | 0.821689 | 3.532206e-53 | -8.615850e-47 |
Msa0084160 | Msa0139270 | 0.832490 | 9.176897e-56 | -8.615850e-47 |
Msa0084160 | Msa0139460 | 0.805858 | 1.089623e-49 | -8.615850e-47 |
Msa0084160 | Msa0140270 | 0.803978 | 2.692489e-49 | -8.615850e-47 |
Msa0084160 | Msa0147670 | 0.805973 | 1.030516e-49 | -8.615850e-47 |
Msa0084160 | Msa0150910 | 0.828450 | 8.930032e-55 | -8.615850e-47 |
Msa0084160 | Msa0163340 | 0.824725 | 6.907794e-54 | -8.615850e-47 |
Msa0084160 | Msa0163370 | 0.807302 | 5.400599e-50 | -8.615850e-47 |
Msa0084160 | Msa0170990 | 0.813110 | 3.020911e-51 | -8.615850e-47 |
Msa0084160 | Msa0176620 | 0.840509 | 8.332167e-58 | -8.615850e-47 |
Msa0084160 | Msa0197750 | 0.808124 | 3.613886e-50 | -8.615850e-47 |
Msa0084160 | Msa0214630 | 0.803232 | 3.846375e-49 | -8.615850e-47 |
Msa0084160 | Msa0218060 | 0.816884 | 4.393514e-52 | -8.615850e-47 |
Msa0084160 | Msa0219210 | 0.809686 | 1.674174e-50 | -8.615850e-47 |
Msa0084160 | Msa0236610 | 0.810582 | 1.073204e-50 | -8.615850e-47 |
Msa0084160 | Msa0243970 | 0.815183 | 1.053409e-51 | -8.615850e-47 |
Msa0084160 | Msa0243990 | 0.827820 | 1.266509e-54 | -8.615850e-47 |
Msa0084160 | Msa0255010 | 0.810475 | 1.131683e-50 | -8.615850e-47 |
Msa0084160 | Msa0258010 | 0.805078 | 1.588248e-49 | -8.615850e-47 |
Msa0084160 | Msa0266640 | 0.803525 | 3.344277e-49 | -8.615850e-47 |
Msa0084160 | Msa0269720 | 0.807312 | 5.374841e-50 | -8.615850e-47 |
Msa0084160 | Msa0278940 | 0.819158 | 1.345291e-52 | -8.615850e-47 |
Msa0084160 | Msa0291750 | 0.821523 | 3.858859e-53 | -8.615850e-47 |
Msa0084160 | Msa0297650 | 0.812393 | 4.335582e-51 | -8.615850e-47 |
Msa0084160 | Msa0298270 | 0.847152 | 1.385354e-59 | -8.615850e-47 |
Msa0084160 | Msa0315300 | 0.813238 | 2.831745e-51 | -8.615850e-47 |
Msa0084160 | Msa0336630 | 0.820617 | 6.240596e-53 | -8.615850e-47 |
Msa0084160 | Msa0336640 | 0.808997 | 2.352148e-50 | -8.615850e-47 |
Msa0084160 | Msa0356200 | 0.837439 | 5.194358e-57 | -8.615850e-47 |
Msa0084160 | Msa0356250 | 0.846673 | 1.873358e-59 | -8.615850e-47 |
Msa0084160 | Msa0356320 | 0.838041 | 3.638926e-57 | -8.615850e-47 |
Msa0084160 | Msa0356380 | 0.826507 | 2.611666e-54 | -8.615850e-47 |
Msa0084160 | Msa0356410 | 0.830602 | 2.678062e-55 | -8.615850e-47 |
Msa0084160 | Msa0366510 | 0.804653 | 1.948685e-49 | -8.615850e-47 |
Msa0084160 | Msa0393900 | 0.818081 | 2.361347e-52 | -8.615850e-47 |
Msa0084160 | Msa0414480 | 0.820761 | 5.781408e-53 | -8.615850e-47 |
Msa0084160 | Msa0444400 | 0.811028 | 8.592506e-51 | -8.615850e-47 |
Msa0084160 | Msa0469550 | 0.829971 | 3.818466e-55 | -8.615850e-47 |
Msa0084160 | Msa0470370 | 0.803795 | 2.939624e-49 | -8.615850e-47 |
Msa0084160 | Msa0487100 | 0.816166 | 6.359884e-52 | -8.615850e-47 |
Msa0084160 | Msa0491760 | 0.815616 | 8.437355e-52 | -8.615850e-47 |
Msa0084160 | Msa0491800 | 0.804783 | 1.829896e-49 | -8.615850e-47 |
Msa0084160 | Msa0493710 | 0.812860 | 3.427399e-51 | -8.615850e-47 |
Msa0084160 | Msa0515260 | 0.829079 | 6.289995e-55 | -8.615850e-47 |
Msa0084160 | Msa0531030 | 0.814799 | 1.281476e-51 | -8.615850e-47 |
Msa0084160 | Msa0531040 | 0.800046 | 1.731959e-48 | -8.615850e-47 |
Msa0084160 | Msa0531080 | 0.812310 | 4.521942e-51 | -8.615850e-47 |
Msa0084160 | Msa0532660 | 0.811302 | 7.494995e-51 | -8.615850e-47 |
Msa0084160 | Msa0532670 | 0.817532 | 3.140537e-52 | -8.615850e-47 |
Msa0084160 | Msa0532680 | 0.825392 | 4.807493e-54 | -8.615850e-47 |
Msa0084160 | Msa0533510 | 0.805172 | 1.517967e-49 | -8.615850e-47 |
Msa0084160 | Msa0533520 | 0.800055 | 1.724537e-48 | -8.615850e-47 |
Msa0084160 | Msa0535570 | 0.825278 | 5.113826e-54 | -8.615850e-47 |
Msa0084160 | Msa0543740 | 0.841202 | 5.481041e-58 | -8.615850e-47 |
Msa0084160 | Msa0548760 | 0.841020 | 6.119377e-58 | -8.615850e-47 |
Msa0084160 | Msa0548970 | 0.830636 | 2.626681e-55 | -8.615850e-47 |
Msa0084160 | Msa0549970 | 0.804550 | 2.047412e-49 | -8.615850e-47 |
Msa0084160 | Msa0587920 | 0.816504 | 5.343722e-52 | -8.615850e-47 |
Msa0084160 | Msa0589450 | 0.836284 | 1.024310e-56 | -8.615850e-47 |
Msa0084160 | Msa0589460 | 0.829864 | 4.054975e-55 | -8.615850e-47 |
Msa0084160 | Msa0589720 | 0.807847 | 4.139171e-50 | -8.615850e-47 |
Msa0084160 | Msa0591490 | 0.816589 | 5.116453e-52 | -8.615850e-47 |
Msa0084160 | Msa0594330 | 0.806585 | 7.658857e-50 | -8.615850e-47 |
Msa0084160 | Msa0599600 | 0.822955 | 1.795817e-53 | -8.615850e-47 |
Msa0084160 | Msa0603950 | 0.806715 | 7.188180e-50 | -8.615850e-47 |
Msa0084160 | Msa0605460 | 0.850314 | 1.839376e-60 | -8.615850e-47 |
Msa0084160 | Msa0605470 | 0.828533 | 8.525454e-55 | -8.615850e-47 |
Msa0084160 | Msa0605480 | 0.817659 | 2.940238e-52 | -8.615850e-47 |
Msa0084160 | Msa0629720 | 0.807008 | 6.232972e-50 | -8.615850e-47 |
Msa0084160 | Msa0631700 | 0.805783 | 1.129787e-49 | -8.615850e-47 |
Msa0084160 | Msa0640290 | 0.836449 | 9.300043e-57 | -8.615850e-47 |
Msa0084160 | Msa0643840 | 0.819498 | 1.125231e-52 | -8.615850e-47 |
Msa0084160 | Msa0645120 | 0.823076 | 1.682662e-53 | -8.615850e-47 |
Msa0084160 | Msa0645150 | 0.805721 | 1.164382e-49 | -8.615850e-47 |
Msa0084160 | Msa0646040 | 0.841116 | 5.775329e-58 | -8.615850e-47 |
Msa0084160 | Msa0646440 | 0.802393 | 5.730335e-49 | -8.615850e-47 |
Msa0084160 | Msa0667600 | 0.826446 | 2.700454e-54 | -8.615850e-47 |
Msa0084160 | Msa0667620 | 0.807660 | 4.534598e-50 | -8.615850e-47 |
Msa0084160 | Msa0667640 | 0.805550 | 1.264543e-49 | -8.615850e-47 |
Msa0084160 | Msa0670220 | 0.817597 | 3.036487e-52 | -8.615850e-47 |
Msa0084160 | Msa0670360 | 0.832467 | 9.295604e-56 | -8.615850e-47 |
Msa0084160 | Msa0672780 | 0.801548 | 8.547173e-49 | -8.615850e-47 |
Msa0084160 | Msa0676190 | 0.801042 | 1.084897e-48 | -8.615850e-47 |
Msa0084160 | Msa0678620 | 0.842786 | 2.090010e-58 | -8.615850e-47 |
Msa0084160 | Msa0684590 | 0.814889 | 1.223893e-51 | -8.615850e-47 |
Msa0084160 | Msa0684600 | 0.833879 | 4.137986e-56 | -8.615850e-47 |
Msa0084160 | Msa0684720 | 0.832798 | 7.697446e-56 | -8.615850e-47 |
Msa0084160 | Msa0716600 | 0.805618 | 1.224018e-49 | -8.615850e-47 |
Msa0084160 | Msa0727480 | 0.831057 | 2.070741e-55 | -8.615850e-47 |
Msa0084160 | Msa0730890 | 0.816596 | 5.098495e-52 | -8.615850e-47 |
Msa0084160 | Msa0735280 | 0.826987 | 2.006096e-54 | -8.615850e-47 |
Msa0084160 | Msa0758150 | 0.822350 | 2.483538e-53 | -8.615850e-47 |
Msa0084160 | Msa0768670 | 0.806751 | 7.064592e-50 | -8.615850e-47 |
Msa0084160 | Msa0768720 | 0.804906 | 1.725141e-49 | -8.615850e-47 |
Msa0084160 | Msa0777250 | 0.813442 | 2.553986e-51 | -8.615850e-47 |
Msa0084160 | Msa0791300 | 0.806393 | 8.409516e-50 | -8.615850e-47 |
Msa0084160 | Msa0793060 | -0.802623 | 5.137894e-49 | -8.615850e-47 |
Msa0084160 | Msa0814230 | 0.816256 | 6.074878e-52 | -8.615850e-47 |
Msa0084160 | Msa0816140 | 0.818960 | 1.492357e-52 | -8.615850e-47 |
Msa0084160 | Msa0817100 | 0.826091 | 3.280688e-54 | -8.615850e-47 |
Msa0084160 | Msa0824850 | 0.822660 | 2.103474e-53 | -8.615850e-47 |
Msa0084160 | Msa0824860 | 0.838390 | 2.959027e-57 | -8.615850e-47 |
Msa0084160 | Msa0854380 | 0.811593 | 6.477793e-51 | -8.615850e-47 |
Msa0084160 | Msa0863840 | 0.825799 | 3.849766e-54 | -8.615850e-47 |
Msa0084160 | Msa0863850 | 0.812402 | 4.316506e-51 | -8.615850e-47 |
Msa0084160 | Msa0863860 | 0.801903 | 7.227229e-49 | -8.615850e-47 |
Msa0084160 | Msa0864160 | 0.812398 | 4.325599e-51 | -8.615850e-47 |
Msa0084160 | Msa0883640 | 0.817804 | 2.727588e-52 | -8.615850e-47 |
Msa0084160 | Msa0893840 | 0.814835 | 1.258136e-51 | -8.615850e-47 |
Msa0084160 | Msa0896920 | 0.835303 | 1.814960e-56 | -8.615850e-47 |
Msa0084160 | Msa0896950 | 0.800577 | 1.350030e-48 | -8.615850e-47 |
Msa0084160 | Msa0910830 | 0.825898 | 3.646885e-54 | -8.615850e-47 |
Msa0084160 | Msa0913550 | 0.828400 | 9.181964e-55 | -8.615850e-47 |
Msa0084160 | Msa0951150 | 0.816717 | 4.788581e-52 | -8.615850e-47 |
Msa0084160 | Msa0960090 | 0.819259 | 1.275642e-52 | -8.615850e-47 |
Msa0084160 | Msa0962290 | 0.800595 | 1.338878e-48 | -8.615850e-47 |
Msa0084160 | Msa0971880 | 0.812136 | 4.933465e-51 | -8.615850e-47 |
Msa0084160 | Msa0985250 | 0.809096 | 2.240580e-50 | -8.615850e-47 |
Msa0084160 | Msa0985700 | 0.819588 | 1.073377e-52 | -8.615850e-47 |
Msa0084160 | Msa0987640 | 0.813410 | 2.596388e-51 | -8.615850e-47 |
Msa0084160 | Msa0993450 | 0.801768 | 7.706567e-49 | -8.615850e-47 |
Msa0084160 | Msa0996980 | 0.802928 | 4.445688e-49 | -8.615850e-47 |
Msa0084160 | Msa1003110 | 0.802334 | 5.892495e-49 | -8.615850e-47 |
Msa0084160 | Msa1006940 | 0.854469 | 1.205782e-61 | -8.615850e-47 |
Msa0084160 | Msa1007930 | 0.816098 | 6.586697e-52 | -8.615850e-47 |
Msa0084160 | Msa1021620 | 0.823900 | 1.079709e-53 | -8.615850e-47 |
Msa0084160 | Msa1061670 | 0.845002 | 5.328148e-59 | -8.615850e-47 |
Msa0084160 | Msa1064940 | 0.805729 | 1.159928e-49 | -8.615850e-47 |
Msa0084160 | Msa1076830 | 0.829695 | 4.457719e-55 | -8.615850e-47 |
Msa0084160 | Msa1083100 | 0.841117 | 5.770848e-58 | -8.615850e-47 |
Msa0084160 | Msa1099640 | 0.818905 | 1.535967e-52 | -8.615850e-47 |
Msa0084160 | Msa1100560 | 0.812942 | 3.288194e-51 | -8.615850e-47 |
Msa0084160 | Msa1104960 | 0.801419 | 9.086192e-49 | -8.615850e-47 |
Msa0084160 | Msa1106960 | 0.840234 | 9.828333e-58 | -8.615850e-47 |
Msa0084160 | Msa1109540 | 0.816753 | 4.701590e-52 | -8.615850e-47 |
Msa0084160 | Msa1109880 | 0.808203 | 3.476231e-50 | -8.615850e-47 |
Msa0084160 | Msa1109890 | 0.820862 | 5.479990e-53 | -8.615850e-47 |
Msa0084160 | Msa1112730 | 0.800097 | 1.691316e-48 | -8.615850e-47 |
Msa0084160 | Msa1136060 | 0.813230 | 2.844083e-51 | -8.615850e-47 |
Msa0084160 | Msa1138600 | -0.804947 | 1.691429e-49 | -8.615850e-47 |
Msa0084160 | Msa1149020 | 0.809427 | 1.902342e-50 | -8.615850e-47 |
Msa0084160 | Msa1155630 | 0.805920 | 1.057554e-49 | -8.615850e-47 |
Msa0084160 | Msa1179170 | 0.851194 | 1.040059e-60 | -8.615850e-47 |
Msa0084160 | Msa1179190 | 0.826530 | 2.578950e-54 | -8.615850e-47 |
Msa0084160 | Msa1216600 | 0.830052 | 3.649635e-55 | -8.615850e-47 |
Msa0084160 | Msa1219780 | 0.808900 | 2.467773e-50 | -8.615850e-47 |
Msa0084160 | Msa1220720 | 0.810140 | 1.336261e-50 | -8.615850e-47 |
Msa0084160 | Msa1233620 | 0.820565 | 6.414458e-53 | -8.615850e-47 |
Msa0084160 | Msa1233650 | 0.834234 | 3.371947e-56 | -8.615850e-47 |
Msa0084160 | Msa1265570 | 0.804754 | 1.855486e-49 | -8.615850e-47 |
Msa0084160 | Msa1269050 | 0.831025 | 2.108737e-55 | -8.615850e-47 |
Msa0084160 | Msa1275840 | 0.842060 | 3.256690e-58 | -8.615850e-47 |
Msa0084160 | Msa1296870 | 0.823578 | 1.284559e-53 | -8.615850e-47 |
Msa0084160 | Msa1300610 | 0.832387 | 9.733698e-56 | -8.615850e-47 |
Msa0084160 | Msa1314020 | 0.831299 | 1.806405e-55 | -8.615850e-47 |
Msa0084160 | Msa1314710 | 0.817648 | 2.957661e-52 | -8.615850e-47 |
Msa0084160 | Msa1323120 | 0.816965 | 4.211749e-52 | -8.615850e-47 |
Msa0084160 | Msa1323160 | 0.832849 | 7.473650e-56 | -8.615850e-47 |
Msa0084160 | Msa1329740 | 0.836732 | 7.876831e-57 | -8.615850e-47 |
Msa0084160 | Msa1334670 | 0.805264 | 1.451700e-49 | -8.615850e-47 |
Msa0084160 | Msa1336100 | 0.800370 | 1.487837e-48 | -8.615850e-47 |
Msa0084160 | Msa1339490 | 0.866839 | 2.126013e-65 | -8.615850e-47 |
Msa0084160 | Msa1350490 | 0.834891 | 2.305695e-56 | -8.615850e-47 |
Msa0084160 | Msa1357490 | 0.826020 | 3.411157e-54 | -8.615850e-47 |
Msa0084160 | Msa1357750 | 0.808174 | 3.526439e-50 | -8.615850e-47 |
Msa0084160 | Msa1362590 | 0.803193 | 3.918901e-49 | -8.615850e-47 |
Msa0084160 | Msa1363690 | 0.805654 | 1.202546e-49 | -8.615850e-47 |
Msa0084160 | Msa1365230 | 0.811883 | 5.602821e-51 | -8.615850e-47 |
Msa0084160 | Msa1370930 | 0.847715 | 9.703683e-60 | -8.615850e-47 |
Msa0084160 | Msa1376070 | 0.842021 | 3.334363e-58 | -8.615850e-47 |
Msa0084160 | Msa1377520 | 0.816523 | 5.292685e-52 | -8.615850e-47 |
Msa0084160 | Msa1378400 | 0.815805 | 7.656772e-52 | -8.615850e-47 |
Msa0084160 | Msa1378950 | 0.837505 | 4.996528e-57 | -8.615850e-47 |
Msa0084160 | Msa1380490 | 0.847046 | 1.481484e-59 | -8.615850e-47 |
Msa0084160 | Msa1382180 | 0.812832 | 3.476542e-51 | -8.615850e-47 |
Msa0084160 | Msa1386260 | 0.840265 | 9.652046e-58 | -8.615850e-47 |
Msa0084160 | Msa1393440 | 0.848748 | 5.028386e-60 | -8.615850e-47 |
Msa0084160 | Msa1395690 | 0.843014 | 1.818204e-58 | -8.615850e-47 |
Msa0084160 | Msa1396550 | 0.813939 | 1.985560e-51 | -8.615850e-47 |
Msa0084160 | Msa1407670 | 0.822311 | 2.535428e-53 | -8.615850e-47 |
Msa0084160 | Msa1409600 | 0.832540 | 8.917833e-56 | -8.615850e-47 |
Msa0084160 | Msa1411550 | 0.817517 | 3.165811e-52 | -8.615850e-47 |
Msa0084160 | Msa1413090 | 0.822693 | 2.066017e-53 | -8.615850e-47 |
Msa0084160 | Msa1418190 | 0.806671 | 7.345186e-50 | -8.615850e-47 |
Msa0084160 | Msa1420020 | 0.818223 | 2.193062e-52 | -8.615850e-47 |
Msa0084160 | Msa1421120 | 0.816104 | 6.568887e-52 | -8.615850e-47 |
Msa0084160 | Msa1426420 | 0.833396 | 5.463912e-56 | -8.615850e-47 |
Msa0084160 | Msa1445900 | 0.826210 | 3.074800e-54 | -8.615850e-47 |
Msa0084160 | Msa1447790 | 0.815678 | 8.173584e-52 | -8.615850e-47 |
Msa0084160 | Msa1449770 | 0.816042 | 6.781932e-52 | -8.615850e-47 |
Msa0084160 | Msa1452920 | 0.857287 | 1.808435e-62 | -8.615850e-47 |
Msa0084160 | Msa1459610 | 0.833588 | 4.891576e-56 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0084160 | MtrunA17_Chr1g0197791 | 67.041 | 267 | 39 | 3 | 1 | 220 | 1 | 265 | 6.05e-115 | 328 |
Msa0084160 | MtrunA17_Chr3g0087611 | 62.191 | 283 | 42 | 5 | 1 | 220 | 1 | 281 | 2.65e-108 | 312 |
Msa0084160 | MtrunA17_Chr1g0197761 | 58.088 | 272 | 56 | 4 | 1 | 216 | 1 | 270 | 8.11e-100 | 290 |
Msa0084160 | MtrunA17_Chr1g0197751 | 75.301 | 166 | 37 | 2 | 52 | 215 | 29 | 192 | 2.47e-82 | 244 |
Msa0084160 | MtrunA17_Chr3g0100011 | 59.574 | 141 | 53 | 2 | 61 | 199 | 137 | 275 | 3.95e-48 | 162 |
Msa0084160 | MtrunA17_Chr3g0095851 | 41.111 | 270 | 100 | 6 | 1 | 214 | 2 | 268 | 5.47e-48 | 159 |
Msa0084160 | MtrunA17_Chr3g0095861 | 41.111 | 270 | 100 | 6 | 1 | 214 | 1 | 267 | 5.50e-48 | 159 |
Msa0084160 | MtrunA17_Chr3g0100021 | 55.696 | 158 | 63 | 4 | 47 | 199 | 83 | 238 | 1.32e-47 | 157 |
Msa0084160 | MtrunA17_Chr3g0100031 | 55.263 | 152 | 62 | 3 | 56 | 204 | 105 | 253 | 1.19e-45 | 152 |
Msa0084160 | MtrunA17_Chr3g0096161 | 39.852 | 271 | 100 | 8 | 1 | 212 | 1 | 267 | 1.44e-42 | 145 |
Msa0084160 | MtrunA17_Chr1g0197801 | 39.394 | 264 | 97 | 8 | 1 | 219 | 1 | 246 | 1.17e-41 | 141 |
Msa0084160 | MtrunA17_Chr1g0197771 | 36.538 | 260 | 106 | 5 | 1 | 203 | 1 | 258 | 9.63e-38 | 132 |
Msa0084160 | MtrunA17_Chr3g0104481 | 36.123 | 227 | 115 | 8 | 18 | 214 | 12 | 238 | 1.33e-27 | 105 |
Msa0084160 | MtrunA17_Chr8g0367061 | 38.421 | 190 | 91 | 11 | 34 | 204 | 78 | 260 | 8.71e-23 | 92.8 |
Msa0084160 | MtrunA17_Chr8g0345451 | 43.151 | 146 | 76 | 5 | 61 | 201 | 112 | 255 | 1.54e-22 | 92.4 |
Msa0084160 | MtrunA17_Chr8g0367051 | 39.157 | 166 | 73 | 9 | 61 | 204 | 105 | 264 | 2.45e-22 | 91.7 |
Msa0084160 | MtrunA17_Chr8g0367071 | 40.764 | 157 | 76 | 6 | 61 | 204 | 120 | 272 | 2.46e-22 | 94.7 |
Msa0084160 | MtrunA17_Chr5g0411771 | 36.076 | 158 | 85 | 6 | 61 | 204 | 131 | 286 | 3.72e-22 | 91.7 |
Msa0084160 | MtrunA17_Chr5g0411761 | 38.608 | 158 | 81 | 7 | 61 | 204 | 130 | 285 | 6.52e-22 | 90.9 |
Msa0084160 | MtrunA17_Chr5g0411751 | 41.139 | 158 | 77 | 9 | 61 | 204 | 123 | 278 | 1.95e-21 | 89.7 |
Msa0084160 | MtrunA17_Chr8g0367031 | 36.095 | 169 | 92 | 7 | 48 | 204 | 94 | 258 | 2.28e-20 | 86.3 |
Msa0084160 | MtrunA17_Chr5g0411741 | 36.943 | 157 | 84 | 6 | 61 | 204 | 123 | 277 | 6.39e-20 | 85.5 |
Msa0084160 | MtrunA17_Chr4g0011021 | 37.427 | 171 | 89 | 8 | 37 | 203 | 104 | 260 | 6.82e-20 | 85.5 |
Msa0084160 | MtrunA17_Chr8g0367041 | 34.524 | 168 | 94 | 7 | 48 | 203 | 94 | 257 | 2.23e-19 | 84.0 |
Msa0084160 | MtrunA17_Chr5g0411731 | 36.875 | 160 | 86 | 7 | 61 | 206 | 117 | 275 | 1.03e-18 | 82.0 |
Msa0084160 | MtrunA17_Chr5g0411721 | 37.975 | 158 | 83 | 8 | 61 | 206 | 128 | 282 | 1.52e-17 | 79.0 |
Msa0084160 | MtrunA17_Chr4g0049601 | 37.179 | 156 | 84 | 6 | 61 | 204 | 113 | 266 | 2.78e-17 | 80.1 |
Msa0084160 | MtrunA17_Chr1g0197821 | 31.839 | 223 | 96 | 9 | 1 | 217 | 1 | 173 | 1.27e-14 | 69.3 |
Msa0084160 | MtrunA17_Chr8g0367021 | 35.625 | 160 | 87 | 7 | 58 | 206 | 104 | 258 | 2.64e-14 | 69.7 |
Msa0084160 | MtrunA17_Chr4g0049551 | 34.868 | 152 | 81 | 7 | 61 | 198 | 113 | 260 | 1.29e-12 | 66.2 |
Msa0084160 | MtrunA17_Chr1g0197811 | 46.269 | 67 | 32 | 3 | 58 | 123 | 12 | 75 | 5.24e-12 | 59.7 |
Msa0084160 | MtrunA17_Chr8g0366991 | 31.414 | 191 | 114 | 8 | 39 | 215 | 182 | 369 | 8.31e-12 | 63.9 |
Msa0084160 | MtrunA17_Chr7g0274651 | 35.404 | 161 | 81 | 9 | 61 | 204 | 116 | 270 | 8.67e-12 | 63.9 |
Msa0084160 | MtrunA17_Chr8g0366941 | 32.335 | 167 | 96 | 7 | 62 | 215 | 111 | 273 | 2.94e-11 | 61.6 |
Msa0084160 | MtrunA17_Chr4g0049611 | 38.710 | 124 | 55 | 8 | 93 | 204 | 149 | 263 | 6.42e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0084160 | AT5G10530.1 | 37.179 | 156 | 83 | 6 | 62 | 204 | 100 | 253 | 3.23e-16 | 77.4 |
Msa0084160 | AT5G65600.1 | 33.557 | 149 | 87 | 4 | 58 | 194 | 113 | 261 | 1.65e-13 | 69.3 |
Find 51 sgRNAs with CRISPR-Local
Find 441 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCATCAGTTGGAGCGTTTC+CGG | 0.208844 | 1_2:+63456262 | None:intergenic |
CATGCATTAATTATCTTATA+TGG | 0.217894 | 1_2:+63455770 | None:intergenic |
AATATGGTACCTCATAGATT+TGG | 0.272536 | 1_2:+63456100 | None:intergenic |
CTATCTGGTGCTTCAGTAAC+TGG | 0.316918 | 1_2:-63455876 | Msa0084160:CDS |
AGACCAAACCTAACCGTGTT+AGG | 0.331065 | 1_2:+63455897 | None:intergenic |
GAAGGAAATGTCAGAGCATT+AGG | 0.331482 | 1_2:+63463139 | None:intergenic |
AATGCTTACAATCAATTTGT+TGG | 0.337940 | 1_2:-63456158 | Msa0084160:CDS |
CTCATAGATTTGGGATCATA+AGG | 0.359980 | 1_2:+63456110 | None:intergenic |
AACAACACTCAATGTGTTAG+AGG | 0.369181 | 1_2:+63455983 | None:intergenic |
AGTTGACGTTGGTTCCAATA+TGG | 0.371704 | 1_2:+63456084 | None:intergenic |
AATGCTCTGACATTTCCTTC+TGG | 0.381773 | 1_2:-63463136 | Msa0084160:intron |
ACGGTTAGGTTTGGTCTATC+TGG | 0.383443 | 1_2:-63455891 | Msa0084160:CDS |
TTTCTCTCAAGGTCATGAAA+TGG | 0.388433 | 1_2:-63456055 | Msa0084160:CDS |
AAATCTATGAGGTACCATAT+TGG | 0.393883 | 1_2:-63456098 | Msa0084160:CDS |
GATCATAAGGATTGGTATAA+AGG | 0.401771 | 1_2:+63456123 | None:intergenic |
AACTCAGAAAGTGCACGTTT+TGG | 0.408486 | 1_2:-63456197 | Msa0084160:CDS |
CTCCCTAACACGGTTAGGTT+TGG | 0.415201 | 1_2:-63455900 | Msa0084160:CDS |
ATATGGTACCTCATAGATTT+GGG | 0.415491 | 1_2:+63456101 | None:intergenic |
ATGGTAGAAAATTTGCCATT+GGG | 0.420085 | 1_2:+63455951 | None:intergenic |
ATGAAATGGGAATGGGTGAC+TGG | 0.427491 | 1_2:-63456041 | Msa0084160:CDS |
CTGTACTCCCTAACACGGTT+AGG | 0.428279 | 1_2:-63455905 | Msa0084160:CDS |
TTCTCTCAAGGTCATGAAAT+GGG | 0.430289 | 1_2:-63456054 | Msa0084160:CDS |
AAACGTGCACTTTCTGAGTT+GGG | 0.453097 | 1_2:+63456200 | None:intergenic |
CAGAGCATTAGGAGTGAACT+TGG | 0.474972 | 1_2:+63463150 | None:intergenic |
AAAACGTGCACTTTCTGAGT+TGG | 0.481047 | 1_2:+63456199 | None:intergenic |
ACCGGAAACGCTCCAACTGA+TGG | 0.487866 | 1_2:-63456263 | Msa0084160:CDS |
CTTGGTGAAATTGAAAGAAT+GGG | 0.489127 | 1_2:+63463168 | None:intergenic |
ACTTGGTGAAATTGAAAGAA+TGG | 0.490664 | 1_2:+63463167 | None:intergenic |
CAAATCAACGATTTGAGCAA+TGG | 0.492987 | 1_2:+63455932 | None:intergenic |
AATGGTAGAAAATTTGCCAT+TGG | 0.495781 | 1_2:+63455950 | None:intergenic |
TCAAGGTCATGAAATGGGAA+TGG | 0.510357 | 1_2:-63456049 | Msa0084160:CDS |
AAGTGCTGAATGACCATGAA+TGG | 0.510801 | 1_2:+63455838 | None:intergenic |
TGTGTTAGAGGGAGAGTCAT+AGG | 0.513568 | 1_2:+63455995 | None:intergenic |
CCTAAAACAAGTTCATGAGT+TGG | 0.516836 | 1_2:+63463247 | None:intergenic |
CAAGGTCATGAAATGGGAAT+GGG | 0.518239 | 1_2:-63456048 | Msa0084160:CDS |
CAGCACACGACATCCATTCA+TGG | 0.520101 | 1_2:-63455851 | Msa0084160:CDS |
CAACTCTTTAATTTCTCTCA+AGG | 0.521126 | 1_2:-63456066 | Msa0084160:CDS |
AAGAACATCAATCCATCAGT+TGG | 0.521731 | 1_2:+63456251 | None:intergenic |
GACCAAACCTAACCGTGTTA+GGG | 0.528956 | 1_2:+63455898 | None:intergenic |
AGATTTGGGATCATAAGGAT+TGG | 0.548372 | 1_2:+63456115 | None:intergenic |
CTTATGATCCCAAATCTATG+AGG | 0.558220 | 1_2:-63456109 | Msa0084160:CDS |
TCATTCGTAGTAGAGACCAC+CGG | 0.586383 | 1_2:-63456281 | Msa0084160:intron |
GTTGTTGTCACTTACCCCAA+TGG | 0.586471 | 1_2:-63455966 | Msa0084160:CDS |
AGAAATTAAAGAGTTGACGT+TGG | 0.590878 | 1_2:+63456073 | None:intergenic |
TGGTAGAAAATTTGCCATTG+GGG | 0.595930 | 1_2:+63455952 | None:intergenic |
TATGGTTTGTAACTTGTCTG+TGG | 0.599274 | 1_2:+63455788 | None:intergenic |
GGTGGAATCACAGTGTCTTG+TGG | 0.603572 | 1_2:+63456221 | None:intergenic |
ATCAGTTGGAGCGTTTCCGG+TGG | 0.608436 | 1_2:+63456265 | None:intergenic |
CGTGCACTTTCTGAGTTGGG+TGG | 0.613896 | 1_2:+63456203 | None:intergenic |
ACAACACTCAATGTGTTAGA+GGG | 0.619552 | 1_2:+63455984 | None:intergenic |
GAAAACTGTACTCCCTAACA+CGG | 0.659450 | 1_2:-63455910 | Msa0084160:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATATTTAATTAGTTGATA+TGG | + | chr1_2:63456445-63456464 | None:intergenic | 10.0% |
!!! | TATGTCAATTTTATTTTATT+TGG | + | chr1_2:63457855-63457874 | None:intergenic | 10.0% |
!! | ATCTTAATATATATTAAATG+AGG | - | chr1_2:63460099-63460118 | Msa0084160:intron | 10.0% |
!!! | AAATATTTTTTGAACTAATT+TGG | + | chr1_2:63460929-63460948 | None:intergenic | 10.0% |
!!! | TTTTTTTATTTTTTTTGTTG+TGG | + | chr1_2:63461254-63461273 | None:intergenic | 10.0% |
!!! | AAATATTTAATTAGTTGATA+TGG | + | chr1_2:63456445-63456464 | None:intergenic | 10.0% |
!! | ATATTCCAATAATATTATGT+GGG | + | chr1_2:63456577-63456596 | None:intergenic | 15.0% |
!! | TATATTCCAATAATATTATG+TGG | + | chr1_2:63456578-63456597 | None:intergenic | 15.0% |
!! | TAATTATATCAGAATTCTTT+AGG | - | chr1_2:63456648-63456667 | Msa0084160:intron | 15.0% |
!! | AAGTATAGAACATAAAATAA+AGG | - | chr1_2:63457042-63457061 | Msa0084160:intron | 15.0% |
!!! | AAATGAAATGACATAATTTT+CGG | + | chr1_2:63457667-63457686 | None:intergenic | 15.0% |
!! | TAAAATTGACATATTAAACT+AGG | - | chr1_2:63457862-63457881 | Msa0084160:intron | 15.0% |
!! | TTAAATATAGTGTTTCTTAA+TGG | + | chr1_2:63458104-63458123 | None:intergenic | 15.0% |
!!! | TAGTTTGCTTATTATAATTA+TGG | + | chr1_2:63458144-63458163 | None:intergenic | 15.0% |
!! | TAATAGAACAAAATTAAATG+AGG | + | chr1_2:63458370-63458389 | None:intergenic | 15.0% |
!!! | TCAAAATTTTCTTAATTTGT+GGG | - | chr1_2:63458443-63458462 | Msa0084160:intron | 15.0% |
!! | TTTGTATTTAAAAGACTATT+TGG | + | chr1_2:63458653-63458672 | None:intergenic | 15.0% |
!!! | TTTTTTTTGATTGTCATTAA+TGG | + | chr1_2:63458682-63458701 | None:intergenic | 15.0% |
!! | AAAGATATATCAATTTAGAA+TGG | + | chr1_2:63458744-63458763 | None:intergenic | 15.0% |
!! | AATAATATTAACATTATCCT+TGG | + | chr1_2:63459364-63459383 | None:intergenic | 15.0% |
!!! | TATAAGATTCAATTTTCTTT+TGG | + | chr1_2:63460718-63460737 | None:intergenic | 15.0% |
!!! | AAAGTTTATTTTGAGATATT+AGG | + | chr1_2:63461036-63461055 | None:intergenic | 15.0% |
!! | ATATTCCAATAATATTATGT+GGG | + | chr1_2:63456577-63456596 | None:intergenic | 15.0% |
!! | TATATTCCAATAATATTATG+TGG | + | chr1_2:63456578-63456597 | None:intergenic | 15.0% |
!!! | TAATTATATTAGCTTTTTGT+TGG | + | chr1_2:63462588-63462607 | None:intergenic | 15.0% |
!! | ATATTCCAATAATATTATGT+GGG | + | chr1_2:63456577-63456596 | None:intergenic | 15.0% |
!! | TATATTCCAATAATATTATG+TGG | + | chr1_2:63456578-63456597 | None:intergenic | 15.0% |
!! | ATTCATAATTGTTGAACATA+TGG | + | chr1_2:63456058-63456077 | None:intergenic | 20.0% |
!! | TATCAAGGATATTAAGAATT+AGG | - | chr1_2:63456140-63456159 | Msa0084160:CDS | 20.0% |
!! | ATCAAGGATATTAAGAATTA+GGG | - | chr1_2:63456141-63456160 | Msa0084160:CDS | 20.0% |
!!! | ATATTAAGAATTAGGGTATT+AGG | - | chr1_2:63456148-63456167 | Msa0084160:CDS | 20.0% |
!! | AAGGATATTAGATTTCTAAT+TGG | + | chr1_2:63456478-63456497 | None:intergenic | 20.0% |
!! | AGTGATCAAATTAAGTAATA+AGG | + | chr1_2:63456497-63456516 | None:intergenic | 20.0% |
!! | ATTAGCTATTTATCATTTGT+GGG | + | chr1_2:63456532-63456551 | None:intergenic | 20.0% |
!! | TATTAGCTATTTATCATTTG+TGG | + | chr1_2:63456533-63456552 | None:intergenic | 20.0% |
!! | ATCTAAAGATAAATAGCATT+CGG | + | chr1_2:63456681-63456700 | None:intergenic | 20.0% |
!!! | TGTTCTATACTTTTGTTTTT+TGG | + | chr1_2:63457034-63457053 | None:intergenic | 20.0% |
!! | TTCAACAACAATAATCTATA+AGG | - | chr1_2:63457186-63457205 | Msa0084160:intron | 20.0% |
!! | TAAGGCAATAAACTTTATAA+AGG | - | chr1_2:63457204-63457223 | Msa0084160:intron | 20.0% |
!! | CAAAGTTTGAATTGTTAAAA+AGG | + | chr1_2:63457464-63457483 | None:intergenic | 20.0% |
!!! | ATGATTTTATTATACGCATT+TGG | + | chr1_2:63457532-63457551 | None:intergenic | 20.0% |
!! | ATCATATATAAGAATCCTAT+AGG | - | chr1_2:63457547-63457566 | Msa0084160:intron | 20.0% |
!! | GATAATATTATGAAGAATTG+TGG | + | chr1_2:63457921-63457940 | None:intergenic | 20.0% |
!! | AATTACTTTATGAGAATTTG+TGG | - | chr1_2:63457958-63457977 | Msa0084160:intron | 20.0% |
!! | CAAATTTCTTAACATATAAG+TGG | - | chr1_2:63457995-63458014 | Msa0084160:intron | 20.0% |
!!! | ATTGACACAAAAGTTTTATT+CGG | - | chr1_2:63458051-63458070 | Msa0084160:intron | 20.0% |
!!! | TAAATTGTTAAGTTTTCTTG+AGG | + | chr1_2:63458419-63458438 | None:intergenic | 20.0% |
!!! | CTCAAAATTTTCTTAATTTG+TGG | - | chr1_2:63458442-63458461 | Msa0084160:intron | 20.0% |
!! | AAAATACCTCAAAAAGATAA+GGG | + | chr1_2:63458813-63458832 | None:intergenic | 20.0% |
!!! | TATTTTCTTTGCTTAAACTA+AGG | + | chr1_2:63459164-63459183 | None:intergenic | 20.0% |
!! | TGAAATATCATATAGATTAG+AGG | + | chr1_2:63459216-63459235 | None:intergenic | 20.0% |
!!! | TCTTAAAAGTTCTAACTTTT+AGG | + | chr1_2:63459395-63459414 | None:intergenic | 20.0% |
!! | TTAAGATTATCTAGTAATTG+CGG | + | chr1_2:63460086-63460105 | None:intergenic | 20.0% |
!!! | TAATTTTCCATGTGAATAAT+AGG | + | chr1_2:63460162-63460181 | None:intergenic | 20.0% |
!! | ACATTTCACAGTAAATTAAA+TGG | - | chr1_2:63460374-63460393 | Msa0084160:intron | 20.0% |
!! | CATTTCACAGTAAATTAAAT+GGG | - | chr1_2:63460375-63460394 | Msa0084160:intron | 20.0% |
!! | AAGGAAATATGAATACATAA+TGG | + | chr1_2:63461118-63461137 | None:intergenic | 20.0% |
!! | ATTTGCATCTAAAGAATTAT+TGG | + | chr1_2:63461186-63461205 | None:intergenic | 20.0% |
!! | AAAAAAAAACTAGAAAAGCT+AGG | - | chr1_2:63461268-63461287 | Msa0084160:intron | 20.0% |
!! | AAGACTGTCAATTAATTAAT+TGG | - | chr1_2:63461325-63461344 | Msa0084160:intron | 20.0% |
!! | TAAATTAAGATAACTCAAGT+AGG | + | chr1_2:63461429-63461448 | None:intergenic | 20.0% |
!! | ATATGGTAAAAATCTTTGAT+TGG | + | chr1_2:63461622-63461641 | None:intergenic | 20.0% |
!! | TATCTCATATTTCATGAATT+AGG | - | chr1_2:63461878-63461897 | Msa0084160:intron | 20.0% |
!! | ATCTCATATTTCATGAATTA+GGG | - | chr1_2:63461879-63461898 | Msa0084160:intron | 20.0% |
!! | ATTCATAATTGTTGAACATA+TGG | + | chr1_2:63456058-63456077 | None:intergenic | 20.0% |
!! | TATCAAGGATATTAAGAATT+AGG | - | chr1_2:63456140-63456159 | Msa0084160:CDS | 20.0% |
!! | ATCAAGGATATTAAGAATTA+GGG | - | chr1_2:63456141-63456160 | Msa0084160:CDS | 20.0% |
!!! | ATATTAAGAATTAGGGTATT+AGG | - | chr1_2:63456148-63456167 | Msa0084160:CDS | 20.0% |
!! | AAGACTATTAGATTTCTAAT+TGG | + | chr1_2:63462447-63462466 | None:intergenic | 20.0% |
!! | ATTAGCTATTTATCATTTGT+GGG | + | chr1_2:63456532-63456551 | None:intergenic | 20.0% |
!! | TATTAGCTATTTATCATTTG+TGG | + | chr1_2:63456533-63456552 | None:intergenic | 20.0% |
! | CAACAATTATGAATCAATAG+CGG | - | chr1_2:63456064-63456083 | Msa0084160:CDS | 25.0% |
! | ACATTGAACATGATTATGAT+CGG | - | chr1_2:63456098-63456117 | Msa0084160:CDS | 25.0% |
! | ATTTGATCACTAATCAACTA+AGG | - | chr1_2:63456506-63456525 | Msa0084160:intron | 25.0% |
! | ATTTGCCCACATAATATTAT+TGG | - | chr1_2:63456569-63456588 | Msa0084160:intron | 25.0% |
! | TAGATTTCAATCTTACAATC+TGG | - | chr1_2:63456696-63456715 | Msa0084160:intron | 25.0% |
! | ATGTCATTATATAACTTGAG+TGG | - | chr1_2:63457253-63457272 | Msa0084160:intron | 25.0% |
! | ACATTAGAAATCTGACAATT+TGG | + | chr1_2:63457399-63457418 | None:intergenic | 25.0% |
! | GTTCTCTTTAATAATCCTTA+TGG | - | chr1_2:63457435-63457454 | Msa0084160:intron | 25.0% |
! | TGAATTCATATACTTCCTAA+TGG | - | chr1_2:63457597-63457616 | Msa0084160:intron | 25.0% |
! | GAATTCATATACTTCCTAAT+GGG | - | chr1_2:63457598-63457617 | Msa0084160:intron | 25.0% |
!! | ATTCTTCTCAAGGTATTATT+CGG | + | chr1_2:63457722-63457741 | None:intergenic | 25.0% |
! | CATAAAGTAATTGTCTCATT+TGG | + | chr1_2:63457950-63457969 | None:intergenic | 25.0% |
! | GTGACATTAATGATACAATA+TGG | + | chr1_2:63458082-63458101 | None:intergenic | 25.0% |
! | GTGACATTCTATATTGTTTA+AGG | + | chr1_2:63458492-63458511 | None:intergenic | 25.0% |
! | GAAAATACCTCAAAAAGATA+AGG | + | chr1_2:63458814-63458833 | None:intergenic | 25.0% |
! | ATTCATAAAGTGTGCAAATA+AGG | + | chr1_2:63458876-63458895 | None:intergenic | 25.0% |
! | GGTATTTCATGAAGATTATT+AGG | + | chr1_2:63459095-63459114 | None:intergenic | 25.0% |
!!! | ATAGATTAGAGGTGTTATTT+AGG | + | chr1_2:63459205-63459224 | None:intergenic | 25.0% |
! | ACAATAATATCAATTGCTAG+TGG | - | chr1_2:63459532-63459551 | Msa0084160:intron | 25.0% |
!!! | ATCCAAAGATTGTGTTTTAA+TGG | + | chr1_2:63459772-63459791 | None:intergenic | 25.0% |
! | TTAACGTAATGATCAAACAT+TGG | - | chr1_2:63459820-63459839 | Msa0084160:intron | 25.0% |
! | TAATTATCCATGTGGATAAT+AGG | + | chr1_2:63459883-63459902 | None:intergenic | 25.0% |
! | TTATAACGTAATTATCCATG+TGG | + | chr1_2:63459891-63459910 | None:intergenic | 25.0% |
! | ATCACATGTATGTAAGTATT+CGG | - | chr1_2:63459927-63459946 | Msa0084160:intron | 25.0% |
! | TGCATATGATAATAAATGTG+TGG | + | chr1_2:63460196-63460215 | None:intergenic | 25.0% |
!! | GAATTTTTCTTCACACTTAA+GGG | + | chr1_2:63460490-63460509 | None:intergenic | 25.0% |
!! | TGAATTTTTCTTCACACTTA+AGG | + | chr1_2:63460491-63460510 | None:intergenic | 25.0% |
! | ATGTATTGTCTTACACATAT+TGG | + | chr1_2:63460550-63460569 | None:intergenic | 25.0% |
!! | TAAAGTTTGTTTCCTTACTT+AGG | + | chr1_2:63460829-63460848 | None:intergenic | 25.0% |
! | GGCAATTCTTGATATATATT+AGG | + | chr1_2:63461015-63461034 | None:intergenic | 25.0% |
!! | ATTAATTGGCTCAATAGTAA+TGG | - | chr1_2:63461339-63461358 | Msa0084160:intron | 25.0% |
!!! | TTGTTTTGTTTGATTCAAAG+TGG | + | chr1_2:63461586-63461605 | None:intergenic | 25.0% |
! | GTAAAAATCTTTGATTGGAA+AGG | + | chr1_2:63461617-63461636 | None:intergenic | 25.0% |
! | AAAACTGTTGCATAAAGTAA+AGG | - | chr1_2:63461702-63461721 | Msa0084160:intron | 25.0% |
! | GTAAAGGAAATCGAATATTA+TGG | - | chr1_2:63461718-63461737 | Msa0084160:intron | 25.0% |
!! | GAGATATTATGTTTTTCTTG+CGG | + | chr1_2:63461864-63461883 | None:intergenic | 25.0% |
! | CAACAATTATGAATCAATAG+CGG | - | chr1_2:63456064-63456083 | Msa0084160:CDS | 25.0% |
! | ACATTGAACATGATTATGAT+CGG | - | chr1_2:63456098-63456117 | Msa0084160:CDS | 25.0% |
! | ATTTGATCACTAATCAACTA+AGG | - | chr1_2:63456506-63456525 | Msa0084160:intron | 25.0% |
! | TTAGCTATTTATCATTTGTG+GGG | + | chr1_2:63456531-63456550 | None:intergenic | 25.0% |
! | ATTTGCCCACATAATATTAT+TGG | - | chr1_2:63456569-63456588 | Msa0084160:intron | 25.0% |
! | ATTTGCCCACATAATATTAT+TGG | - | chr1_2:63456569-63456588 | Msa0084160:intron | 25.0% |
! | AATGCTTACAATCAATTTGT+TGG | - | chr1_2:63462898-63462917 | Msa0084160:intron | 25.0% |
CTTGGTGAAATTGAAAGAAT+GGG | + | chr1_2:63455891-63455910 | None:intergenic | 30.0% | |
! | ACTTGGTGAAATTGAAAGAA+TGG | + | chr1_2:63455892-63455911 | None:intergenic | 30.0% |
ATGCTCAAACGTTAAACAAT+GGG | - | chr1_2:63455960-63455979 | Msa0084160:CDS | 30.0% | |
GAGAAAACTGTTGGAAATTT+AGG | - | chr1_2:63456004-63456023 | Msa0084160:CDS | 30.0% | |
! | ACGACATGTTTGATTTATCA+AGG | - | chr1_2:63456125-63456144 | Msa0084160:CDS | 30.0% |
! | ATCTGAAACAAACATCAACA+CGG | - | chr1_2:63456233-63456252 | Msa0084160:CDS | 30.0% |
ATCCAATATAAAAGAGGCTA+TGG | + | chr1_2:63456363-63456382 | None:intergenic | 30.0% | |
! | ATAGCCTCTTTTATATTGGA+TGG | - | chr1_2:63456362-63456381 | Msa0084160:intron | 30.0% |
! | TTTTATATTGGATGGCCATT+AGG | - | chr1_2:63456370-63456389 | Msa0084160:intron | 30.0% |
TTTATATTGGATGGCCATTA+GGG | - | chr1_2:63456371-63456390 | Msa0084160:intron | 30.0% | |
TTTCCCATTATTCCGTTAAT+GGG | - | chr1_2:63456394-63456413 | Msa0084160:intron | 30.0% | |
TCCACCTCATACATTAATAA+TGG | - | chr1_2:63456719-63456738 | Msa0084160:intron | 30.0% | |
CCACCTCATACATTAATAAT+GGG | - | chr1_2:63456720-63456739 | Msa0084160:intron | 30.0% | |
! | CTTGATGACATAGATTGATA+TGG | - | chr1_2:63456808-63456827 | Msa0084160:intron | 30.0% |
! | ATCTCACTAAAGTTTTCAGT+TGG | + | chr1_2:63456894-63456913 | None:intergenic | 30.0% |
TGCACAAAATGATACAGTAA+TGG | - | chr1_2:63456941-63456960 | Msa0084160:intron | 30.0% | |
TCATATGGTTGTTGTCATTA+AGG | + | chr1_2:63457091-63457110 | None:intergenic | 30.0% | |
! | ACTTGGTTGCATTTTGTTAA+AGG | + | chr1_2:63457289-63457308 | None:intergenic | 30.0% |
CTGTAAGTATTTATGTCACT+TGG | + | chr1_2:63457306-63457325 | None:intergenic | 30.0% | |
TTACAGTAATTTCCTGAATC+AGG | - | chr1_2:63457320-63457339 | Msa0084160:intron | 30.0% | |
TATAATACACATCCTGATTC+AGG | + | chr1_2:63457335-63457354 | None:intergenic | 30.0% | |
TTGTTAAAAAGGCAACCATA+AGG | + | chr1_2:63457453-63457472 | None:intergenic | 30.0% | |
GCGGATATAATAAGATTGTT+TGG | + | chr1_2:63457504-63457523 | None:intergenic | 30.0% | |
TTATACGCATTTGGAAATAG+CGG | + | chr1_2:63457523-63457542 | None:intergenic | 30.0% | |
ATACTTAGAGATTCTTCTCA+AGG | + | chr1_2:63457732-63457751 | None:intergenic | 30.0% | |
TGAAATGCCTAATACAAAAG+AGG | - | chr1_2:63457752-63457771 | Msa0084160:intron | 30.0% | |
!! | ATGTTTGTTATGTGAAACCA+AGG | + | chr1_2:63457819-63457838 | None:intergenic | 30.0% |
GTCAATTGATACAGAGTAAA+TGG | + | chr1_2:63458037-63458056 | None:intergenic | 30.0% | |
! | AGTTTCTTAACTTGATTGAG+AGG | - | chr1_2:63458259-63458278 | Msa0084160:intron | 30.0% |
AGTATATTTGGATCTTCATG+AGG | + | chr1_2:63458299-63458318 | None:intergenic | 30.0% | |
TTCTTGAGGATATTGAGTTT+GGG | + | chr1_2:63458405-63458424 | None:intergenic | 30.0% | |
TTTCTTGAGGATATTGAGTT+TGG | + | chr1_2:63458406-63458425 | None:intergenic | 30.0% | |
! | TATTTGCCCTTATCTTTTTG+AGG | - | chr1_2:63458804-63458823 | Msa0084160:intron | 30.0% |
GTTTAAAGACTTGATATCGA+TGG | + | chr1_2:63459514-63459533 | None:intergenic | 30.0% | |
! | AATTGCTAGTGGTATTTTAC+AGG | - | chr1_2:63459543-63459562 | Msa0084160:intron | 30.0% |
CACCATTAAAACACAATCTT+TGG | - | chr1_2:63459767-63459786 | Msa0084160:intron | 30.0% | |
AAAGGTGACTATTATTTGAC+AGG | + | chr1_2:63459854-63459873 | None:intergenic | 30.0% | |
TGTCAAATAATAGTCACCTT+TGG | - | chr1_2:63459853-63459872 | Msa0084160:intron | 30.0% | |
GTCAAATAATAGTCACCTTT+GGG | - | chr1_2:63459854-63459873 | Msa0084160:intron | 30.0% | |
TACATGTGATGGTAAATATG+TGG | + | chr1_2:63459917-63459936 | None:intergenic | 30.0% | |
GAATACTTACATACATGTGA+TGG | + | chr1_2:63459928-63459947 | None:intergenic | 30.0% | |
TAAGGTGACTATTATTTGAC+AGG | + | chr1_2:63460133-63460152 | None:intergenic | 30.0% | |
TGTCAAATAATAGTCACCTT+AGG | - | chr1_2:63459853-63459872 | Msa0084160:intron | 30.0% | |
GTCAAATAATAGTCACCTTA+GGG | - | chr1_2:63460133-63460152 | Msa0084160:intron | 30.0% | |
ATCATATGCACTGAATTATC+CGG | - | chr1_2:63460206-63460225 | Msa0084160:intron | 30.0% | |
TAGTATGGAATTATTCATGC+GGG | + | chr1_2:63460264-63460283 | None:intergenic | 30.0% | |
GTAGTATGGAATTATTCATG+CGG | + | chr1_2:63460265-63460284 | None:intergenic | 30.0% | |
AACTTACAAAAGACGTAGTA+TGG | + | chr1_2:63460279-63460298 | None:intergenic | 30.0% | |
TGTGAAATGTCAAGTAATTG+CGG | + | chr1_2:63460364-63460383 | None:intergenic | 30.0% | |
CACAGTAAATTAAATGGGAA+TGG | - | chr1_2:63460380-63460399 | Msa0084160:intron | 30.0% | |
ATGGTTACTTAGCAACATAA+TGG | + | chr1_2:63460452-63460471 | None:intergenic | 30.0% | |
TATGTTGCTAAGTAACCATA+AGG | - | chr1_2:63460453-63460472 | Msa0084160:intron | 30.0% | |
ACTCAATTACTTCCTAAGTA+AGG | - | chr1_2:63460814-63460833 | Msa0084160:intron | 30.0% | |
TTTGGAAATAAGGATAGCAA+AGG | + | chr1_2:63461137-63461156 | None:intergenic | 30.0% | |
!! | TTTGAAGGCTTTTGGAAATA+AGG | + | chr1_2:63461147-63461166 | None:intergenic | 30.0% |
! | ACTTTTACTTCCACATTTGA+AGG | + | chr1_2:63461162-63461181 | None:intergenic | 30.0% |
CTATAAGTATTACTGCCAAA+GGG | + | chr1_2:63461367-63461386 | None:intergenic | 30.0% | |
!! | GTAGGAAATTTGATTTGTGT+CGG | + | chr1_2:63461411-63461430 | None:intergenic | 30.0% |
!!! | CTTTTTTGCTAACTTTGTCT+TGG | + | chr1_2:63461475-63461494 | None:intergenic | 30.0% |
ATCCCAATAAATCAAACATG+AGG | - | chr1_2:63461941-63461960 | Msa0084160:intron | 30.0% | |
! | GTCCTCATGTTTGATTTATT+GGG | + | chr1_2:63461946-63461965 | None:intergenic | 30.0% |
! | ATACCACTTGTTGGAAATTT+AGG | - | chr1_2:63461973-63461992 | Msa0084160:intron | 30.0% |
! | ACGACATGTTTGATTTATCA+AGG | - | chr1_2:63456125-63456144 | Msa0084160:CDS | 30.0% |
! | ATCTGAAACAAACATCAACA+CGG | - | chr1_2:63456233-63456252 | Msa0084160:CDS | 30.0% |
ATCCAATATAAAAGAGGCTA+TGG | + | chr1_2:63456363-63456382 | None:intergenic | 30.0% | |
! | ATAGCCTCTTTTATATTGGA+TGG | - | chr1_2:63456362-63456381 | Msa0084160:intron | 30.0% |
! | TTTTATATTGGATGGCCATT+AGG | - | chr1_2:63456370-63456389 | Msa0084160:intron | 30.0% |
TTTATATTGGATGGCCATTA+GGG | - | chr1_2:63456371-63456390 | Msa0084160:intron | 30.0% | |
TTTCCCATTATTCCGTTAAT+GGG | - | chr1_2:63456394-63456413 | Msa0084160:intron | 30.0% | |
! | GATCATAAGGATTGGTATAA+AGG | + | chr1_2:63462936-63462955 | None:intergenic | 30.0% |
ATATGGTACCTCATAGATTT+GGG | + | chr1_2:63462958-63462977 | None:intergenic | 30.0% | |
AATATGGTACCTCATAGATT+TGG | + | chr1_2:63462959-63462978 | None:intergenic | 30.0% | |
! | AAATCTATGAGGTACCATAT+TGG | - | chr1_2:63462958-63462977 | Msa0084160:intron | 30.0% |
AGAAATTAAAGAGTTGACGT+TGG | + | chr1_2:63462986-63463005 | None:intergenic | 30.0% | |
! | CAACTCTTTAATTTCTCTCA+AGG | - | chr1_2:63462990-63463009 | Msa0084160:intron | 30.0% |
ATGGTAGAAAATTTGCCATT+GGG | + | chr1_2:63463108-63463127 | None:intergenic | 30.0% | |
AATGGTAGAAAATTTGCCAT+TGG | + | chr1_2:63463109-63463128 | None:intergenic | 30.0% | |
CCTAAAACAAGTTCATGAGT+TGG | + | chr1_2:63455812-63455831 | None:intergenic | 35.0% | |
!! | CCAACTCATGAACTTGTTTT+AGG | - | chr1_2:63455809-63455828 | Msa0084160:CDS | 35.0% |
GATGCTCAAACGTTAAACAA+TGG | - | chr1_2:63455959-63455978 | Msa0084160:CDS | 35.0% | |
TGCTCAAACGTTAAACAATG+GGG | - | chr1_2:63455961-63455980 | Msa0084160:CDS | 35.0% | |
! | ATTAGGGTATTAGGAATACC+TGG | - | chr1_2:63456157-63456176 | Msa0084160:CDS | 35.0% |
ACAACAACGATAAAGAGATG+AGG | - | chr1_2:63456208-63456227 | Msa0084160:CDS | 35.0% | |
AGAAGAATGTTTGCCATGTA+CGG | - | chr1_2:63456326-63456345 | Msa0084160:intron | 35.0% | |
TTTGCCATGTACGGTATATT+GGG | - | chr1_2:63456335-63456354 | Msa0084160:intron | 35.0% | |
! | GACCATAGCCTCTTTTATAT+TGG | - | chr1_2:63456358-63456377 | Msa0084160:intron | 35.0% |
ATGGCCATCCAATATAAAAG+AGG | + | chr1_2:63456369-63456388 | None:intergenic | 35.0% | |
GTTTCCCATTATTCCGTTAA+TGG | - | chr1_2:63456393-63456412 | Msa0084160:intron | 35.0% | |
TTAAGATATGTAGCCCAAGT+GGG | + | chr1_2:63456628-63456647 | None:intergenic | 35.0% | |
ATTAAGATATGTAGCCCAAG+TGG | + | chr1_2:63456629-63456648 | None:intergenic | 35.0% | |
CCCATTATTAATGTATGAGG+TGG | + | chr1_2:63456723-63456742 | None:intergenic | 35.0% | |
GGTCCCATTATTAATGTATG+AGG | + | chr1_2:63456726-63456745 | None:intergenic | 35.0% | |
! | TGTCATCAAGTGCATTGATA+TGG | + | chr1_2:63456798-63456817 | None:intergenic | 35.0% |
CATAGATTGATATGGATGAG+TGG | - | chr1_2:63456816-63456835 | Msa0084160:intron | 35.0% | |
! | AAGTTTTCAGTTGGATCAGT+TGG | + | chr1_2:63456885-63456904 | None:intergenic | 35.0% |
!! | TAAGGATGTCTTGGATTAGT+GGG | + | chr1_2:63457073-63457092 | None:intergenic | 35.0% |
! | TTAAGGATGTCTTGGATTAG+TGG | + | chr1_2:63457074-63457093 | None:intergenic | 35.0% |
TGTTGTCATTAAGGATGTCT+TGG | + | chr1_2:63457082-63457101 | None:intergenic | 35.0% | |
CAACCATATGAAAAGACCTT+AGG | - | chr1_2:63457100-63457119 | Msa0084160:intron | 35.0% | |
! | ACACCTAAGGTCTTTTCATA+TGG | + | chr1_2:63457106-63457125 | None:intergenic | 35.0% |
AATCAAAGACATGACACCTA+AGG | + | chr1_2:63457119-63457138 | None:intergenic | 35.0% | |
ATCATTAGTATGTCAGACTC+TGG | + | chr1_2:63457374-63457393 | None:intergenic | 35.0% | |
! | TTTTCCTAAGCTTTGCCTAT+AGG | + | chr1_2:63457565-63457584 | None:intergenic | 35.0% |
AGTCTCAAATATTGCCCATT+AGG | + | chr1_2:63457615-63457634 | None:intergenic | 35.0% | |
AGTTAGTGATGAAAGATCCT+GGG | + | chr1_2:63457782-63457801 | None:intergenic | 35.0% | |
AAGTTAGTGATGAAAGATCC+TGG | + | chr1_2:63457783-63457802 | None:intergenic | 35.0% | |
! | ACTTTTGTTAGAGACTTCCT+TGG | - | chr1_2:63457799-63457818 | Msa0084160:intron | 35.0% |
AATTATGGAGCTGCATAAGA+TGG | + | chr1_2:63458129-63458148 | None:intergenic | 35.0% | |
TCTTGAGGATATTGAGTTTG+GGG | + | chr1_2:63458404-63458423 | None:intergenic | 35.0% | |
! | CTATTTGGTGAATCATTGCT+TGG | + | chr1_2:63458638-63458657 | None:intergenic | 35.0% |
CATATGACCTATTTGAGAGT+TGG | - | chr1_2:63459248-63459267 | Msa0084160:intron | 35.0% | |
GTATACACCAACTCTCAAAT+AGG | + | chr1_2:63459258-63459277 | None:intergenic | 35.0% | |
TGGATCTAGACCTTAGATAA+GGG | + | chr1_2:63459344-63459363 | None:intergenic | 35.0% | |
TTGGATCTAGACCTTAGATA+AGG | + | chr1_2:63459345-63459364 | None:intergenic | 35.0% | |
! | TTATCTAAGGTCTAGATCCA+AGG | - | chr1_2:63459344-63459363 | Msa0084160:intron | 35.0% |
TGCTAAGAATTAACTGCAAG+CGG | - | chr1_2:63459792-63459811 | Msa0084160:intron | 35.0% | |
TTATTTATGCGAGTTGTCGT+CGG | + | chr1_2:63459975-63459994 | None:intergenic | 35.0% | |
GTGAATAATAGGATACCCTA+AGG | + | chr1_2:63460151-63460170 | None:intergenic | 35.0% | |
! | AGGGTATCCTATTATTCACA+TGG | - | chr1_2:63460152-63460171 | Msa0084160:intron | 35.0% |
GAATCAAATCTACACAACAG+AGG | - | chr1_2:63460304-63460323 | Msa0084160:intron | 35.0% | |
! | TCAAGTAATTGCGGTTGTTT+TGG | + | chr1_2:63460355-63460374 | None:intergenic | 35.0% |
AAGCACTACTGACATAATGT+AGG | - | chr1_2:63460416-63460435 | Msa0084160:intron | 35.0% | |
! | ATTTGGTAGCACAGAAAGTA+AGG | + | chr1_2:63460912-63460931 | None:intergenic | 35.0% |
!! | TTTGTTGTTCGCTGATCATT+GGG | + | chr1_2:63461095-63461114 | None:intergenic | 35.0% |
TTTCCAAAAGCCTTCAAATG+TGG | - | chr1_2:63461149-63461168 | Msa0084160:intron | 35.0% | |
CTGTAATGTTCTTGCAACTT+TGG | + | chr1_2:63461218-63461237 | None:intergenic | 35.0% | |
CAAAGTTGCAAGAACATTAC+AGG | - | chr1_2:63461216-63461235 | Msa0084160:intron | 35.0% | |
TCAATAGTAATGGTTCCCTT+TGG | - | chr1_2:63461349-63461368 | Msa0084160:intron | 35.0% | |
GCTATAAGTATTACTGCCAA+AGG | + | chr1_2:63461368-63461387 | None:intergenic | 35.0% | |
GATCAAGTCACACACAAATT+CGG | - | chr1_2:63461806-63461825 | Msa0084160:intron | 35.0% | |
! | GGTCCTCATGTTTGATTTAT+TGG | + | chr1_2:63461947-63461966 | None:intergenic | 35.0% |
AGACCTAAATTTCCAACAAG+TGG | + | chr1_2:63461979-63461998 | None:intergenic | 35.0% | |
! | ATTAGGGTATTAGGAATACC+TGG | - | chr1_2:63456157-63456176 | Msa0084160:CDS | 35.0% |
ACAACAACGATAAAGAGATG+AGG | - | chr1_2:63456208-63456227 | Msa0084160:CDS | 35.0% | |
!! | TGATTTGGTTCTTCCTCAAT+CGG | - | chr1_2:63462236-63462255 | Msa0084160:intron | 35.0% |
AGAAGAATGTTTGCCATGTA+CGG | - | chr1_2:63456326-63456345 | Msa0084160:intron | 35.0% | |
TTTGCCATGTACGGTATATT+GGG | - | chr1_2:63456335-63456354 | Msa0084160:intron | 35.0% | |
! | GACCATAGCCTCTTTTATAT+TGG | - | chr1_2:63456358-63456377 | Msa0084160:intron | 35.0% |
ATGGCCATCCAATATAAAAG+AGG | + | chr1_2:63456369-63456388 | None:intergenic | 35.0% | |
GTTTCCCATTATTCCGTTAA+TGG | - | chr1_2:63456393-63456412 | Msa0084160:intron | 35.0% | |
ATTCCAACAAAAACTCCTTC+AGG | - | chr1_2:63462661-63462680 | Msa0084160:intron | 35.0% | |
AAGAACATCAATCCATCAGT+TGG | + | chr1_2:63462808-63462827 | None:intergenic | 35.0% | |
! | AGATTTGGGATCATAAGGAT+TGG | + | chr1_2:63462944-63462963 | None:intergenic | 35.0% |
! | CTCATAGATTTGGGATCATA+AGG | + | chr1_2:63462949-63462968 | None:intergenic | 35.0% |
CTTATGATCCCAAATCTATG+AGG | - | chr1_2:63462947-63462966 | Msa0084160:intron | 35.0% | |
TTTCTCTCAAGGTCATGAAA+TGG | - | chr1_2:63463001-63463020 | Msa0084160:intron | 35.0% | |
TTCTCTCAAGGTCATGAAAT+GGG | - | chr1_2:63463002-63463021 | Msa0084160:intron | 35.0% | |
ACAACACTCAATGTGTTAGA+GGG | + | chr1_2:63463075-63463094 | None:intergenic | 35.0% | |
AACAACACTCAATGTGTTAG+AGG | + | chr1_2:63463076-63463095 | None:intergenic | 35.0% | |
TGGTAGAAAATTTGCCATTG+GGG | + | chr1_2:63463107-63463126 | None:intergenic | 35.0% | |
CAAATCAACGATTTGAGCAA+TGG | + | chr1_2:63463127-63463146 | None:intergenic | 35.0% | |
! | TATGGTTTGTAACTTGTCTG+TGG | + | chr1_2:63463271-63463290 | None:intergenic | 35.0% |
! | GAAGGAAATGTCAGAGCATT+AGG | + | chr1_2:63455920-63455939 | None:intergenic | 40.0% |
AATGCTCTGACATTTCCTTC+TGG | - | chr1_2:63455920-63455939 | Msa0084160:CDS | 40.0% | |
CTTCTGGTATAACCTTCCAA+GGG | - | chr1_2:63455936-63455955 | Msa0084160:CDS | 40.0% | |
TTCTGGTATAACCTTCCAAG+GGG | - | chr1_2:63455937-63455956 | Msa0084160:CDS | 40.0% | |
ACTAAGCGTGAGAAAACTGT+TGG | - | chr1_2:63455995-63456014 | Msa0084160:CDS | 40.0% | |
AATACCTGGAGATGAAGCTT+TGG | - | chr1_2:63456171-63456190 | Msa0084160:CDS | 40.0% | |
CTTTATCGTTGTTGTCGAGA+GGG | + | chr1_2:63456203-63456222 | None:intergenic | 40.0% | |
TCTTTATCGTTGTTGTCGAG+AGG | + | chr1_2:63456204-63456223 | None:intergenic | 40.0% | |
ACAAACATCAACACGGTTAG+CGG | - | chr1_2:63456240-63456259 | Msa0084160:CDS | 40.0% | |
!! | TGATTTGGTTCTTCCTCAAC+CGG | - | chr1_2:63456267-63456286 | Msa0084160:CDS | 40.0% |
! | AACTTGAGGCATAAAGGTAC+CGG | + | chr1_2:63456289-63456308 | None:intergenic | 40.0% |
GAAGAGAACTTGAGGCATAA+AGG | + | chr1_2:63456295-63456314 | None:intergenic | 40.0% | |
GTTTGCCATGTACGGTATAT+TGG | - | chr1_2:63456334-63456353 | Msa0084160:intron | 40.0% | |
TTGCCATGTACGGTATATTG+GGG | - | chr1_2:63456336-63456355 | Msa0084160:intron | 40.0% | |
! | GGAATAATGGGAAACCCTAA+TGG | + | chr1_2:63456388-63456407 | None:intergenic | 40.0% |
TGGCCCATTAACGGAATAAT+GGG | + | chr1_2:63456400-63456419 | None:intergenic | 40.0% | |
ATGGCCCATTAACGGAATAA+TGG | + | chr1_2:63456401-63456420 | None:intergenic | 40.0% | |
GTTGATATGGACTCAATGAG+TGG | + | chr1_2:63456432-63456451 | None:intergenic | 40.0% | |
TATTCCAACAATCTCCCACT+TGG | - | chr1_2:63456611-63456630 | Msa0084160:intron | 40.0% | |
ATTCCAACAATCTCCCACTT+GGG | - | chr1_2:63456612-63456631 | Msa0084160:intron | 40.0% | |
GTCACTGGCATATAACGTAA+CGG | - | chr1_2:63456758-63456777 | Msa0084160:intron | 40.0% | |
! | CATCAAGTGCATTGATATGG+TGG | + | chr1_2:63456795-63456814 | None:intergenic | 40.0% |
ATTGATATGGATGAGTGGCA+TGG | - | chr1_2:63456821-63456840 | Msa0084160:intron | 40.0% | |
CAGTTGGATCAGTTGGAAAT+AGG | + | chr1_2:63456878-63456897 | None:intergenic | 40.0% | |
CTGCAGAAGTAAAGTTCATG+AGG | + | chr1_2:63456982-63457001 | None:intergenic | 40.0% | |
! | GGTGTCATGTCTTTGATTAG+TGG | - | chr1_2:63457121-63457140 | Msa0084160:intron | 40.0% |
GAATCCTATAGGCAAAGCTT+AGG | - | chr1_2:63457558-63457577 | Msa0084160:intron | 40.0% | |
TGAGACTGAAAAGTCTCTCT+CGG | - | chr1_2:63457628-63457647 | Msa0084160:intron | 40.0% | |
GTTAGTGATGAAAGATCCTG+GGG | + | chr1_2:63457781-63457800 | None:intergenic | 40.0% | |
GTGGATTTAGCAAGTTCAGT+GGG | + | chr1_2:63457902-63457921 | None:intergenic | 40.0% | |
TGTGGATTTAGCAAGTTCAG+TGG | + | chr1_2:63457903-63457922 | None:intergenic | 40.0% | |
! | ACTAGAATCCCTAGTTCTTG+AGG | - | chr1_2:63458211-63458230 | Msa0084160:intron | 40.0% |
! | CTAGAATCCCTAGTTCTTGA+GGG | - | chr1_2:63458212-63458231 | Msa0084160:intron | 40.0% |
CTTGAGGATATTGAGTTTGG+GGG | + | chr1_2:63458403-63458422 | None:intergenic | 40.0% | |
AGAGAAAGACAAGCTCTCAT+TGG | + | chr1_2:63459124-63459143 | None:intergenic | 40.0% | |
AGTTTCACCACCCTTATCTA+AGG | - | chr1_2:63459331-63459350 | Msa0084160:intron | 40.0% | |
ATCTAGACCTTAGATAAGGG+TGG | + | chr1_2:63459341-63459360 | None:intergenic | 40.0% | |
!!! | TTGTGTTTTAATGGTGCGCT+TGG | + | chr1_2:63459763-63459782 | None:intergenic | 40.0% |
TCTAGTAATTGCGGTTGAGA+CGG | + | chr1_2:63460077-63460096 | None:intergenic | 40.0% | |
CTACACAACAGAGGTTACTT+TGG | - | chr1_2:63460313-63460332 | Msa0084160:intron | 40.0% | |
AGGTCATCACACATCATTTG+TGG | + | chr1_2:63460995-63461014 | None:intergenic | 40.0% | |
!! | GTTTGTTGTTCGCTGATCAT+TGG | + | chr1_2:63461096-63461115 | None:intergenic | 40.0% |
! | CTTCCACATTTGAAGGCTTT+TGG | + | chr1_2:63461155-63461174 | None:intergenic | 40.0% |
!!! | TCTTTCGTGTGTCGGTTTTT+TGG | + | chr1_2:63461502-63461521 | None:intergenic | 40.0% |
AAAAACCGACACACGAAAGA+CGG | - | chr1_2:63461502-63461521 | Msa0084160:intron | 40.0% | |
! | TTTCGATTTGTGCTGCGTAT+AGG | + | chr1_2:63461646-63461665 | None:intergenic | 40.0% |
! | CTACGGTGTGCTAATTCTTT+TGG | + | chr1_2:63461832-63461851 | None:intergenic | 40.0% |
!!! | TCTTGCGGTTTTGAATGCTA+CGG | + | chr1_2:63461849-63461868 | None:intergenic | 40.0% |
AATACCTGGAGATGAAGCTT+TGG | - | chr1_2:63456171-63456190 | Msa0084160:CDS | 40.0% | |
CTTTATCGTTGTTGTCGAGA+GGG | + | chr1_2:63456203-63456222 | None:intergenic | 40.0% | |
TCTTTATCGTTGTTGTCGAG+AGG | + | chr1_2:63456204-63456223 | None:intergenic | 40.0% | |
ACAAACATCAACACGGTTAG+CGG | - | chr1_2:63456240-63456259 | Msa0084160:CDS | 40.0% | |
GAAGAGAACTTGAGGCATAA+AGG | + | chr1_2:63456295-63456314 | None:intergenic | 40.0% | |
GTTTGCCATGTACGGTATAT+TGG | - | chr1_2:63456334-63456353 | Msa0084160:intron | 40.0% | |
TTGCCATGTACGGTATATTG+GGG | - | chr1_2:63456336-63456355 | Msa0084160:intron | 40.0% | |
! | GGAATAATGGGAAACCCTAA+TGG | + | chr1_2:63456388-63456407 | None:intergenic | 40.0% |
TGGCCCATTAACGGAATAAT+GGG | + | chr1_2:63456400-63456419 | None:intergenic | 40.0% | |
ATGGCCCATTAACGGAATAA+TGG | + | chr1_2:63456401-63456420 | None:intergenic | 40.0% | |
GTTGATATGGACTCAATGAG+TGG | + | chr1_2:63456432-63456451 | None:intergenic | 40.0% | |
! | GTACCTGAAGGAGTTTTTGT+TGG | + | chr1_2:63462667-63462686 | None:intergenic | 40.0% |
CTTGGTTTAAGTGTACCTGA+AGG | + | chr1_2:63462679-63462698 | None:intergenic | 40.0% | |
GGTACACTTAAACCAAGTAC+AGG | - | chr1_2:63462682-63462701 | Msa0084160:intron | 40.0% | |
GTTAAGATACGACCTGTACT+TGG | + | chr1_2:63462697-63462716 | None:intergenic | 40.0% | |
GGTCTCTACTACGAATGAAA+AGG | + | chr1_2:63462773-63462792 | None:intergenic | 40.0% | |
AAACGTGCACTTTCTGAGTT+GGG | + | chr1_2:63462859-63462878 | None:intergenic | 40.0% | |
AAAACGTGCACTTTCTGAGT+TGG | + | chr1_2:63462860-63462879 | None:intergenic | 40.0% | |
!! | AACTCAGAAAGTGCACGTTT+TGG | - | chr1_2:63462859-63462878 | Msa0084160:intron | 40.0% |
!! | AGTTGACGTTGGTTCCAATA+TGG | + | chr1_2:63462975-63462994 | None:intergenic | 40.0% |
TCAAGGTCATGAAATGGGAA+TGG | - | chr1_2:63463007-63463026 | Msa0084160:intron | 40.0% | |
CAAGGTCATGAAATGGGAAT+GGG | - | chr1_2:63463008-63463027 | Msa0084160:intron | 40.0% | |
GAAAACTGTACTCCCTAACA+CGG | - | chr1_2:63463146-63463165 | Msa0084160:CDS | 40.0% | |
!! | AAGTGCTGAATGACCATGAA+TGG | + | chr1_2:63463221-63463240 | None:intergenic | 40.0% |
! | CAGAGCATTAGGAGTGAACT+TGG | + | chr1_2:63455909-63455928 | None:intergenic | 45.0% |
CCTTGGAAGGTTATACCAGA+AGG | + | chr1_2:63455938-63455957 | None:intergenic | 45.0% | |
CCTTCTGGTATAACCTTCCA+AGG | - | chr1_2:63455935-63455954 | Msa0084160:CDS | 45.0% | |
TTAACGTTTGAGCATCCCCT+TGG | + | chr1_2:63455955-63455974 | None:intergenic | 45.0% | |
TGCCTCAAGTTCTCTTCAGA+TGG | - | chr1_2:63456298-63456317 | Msa0084160:intron | 45.0% | |
GCCTCAAGTTCTCTTCAGAT+GGG | - | chr1_2:63456299-63456318 | Msa0084160:intron | 45.0% | |
CCTCAAGTTCTCTTCAGATG+GGG | - | chr1_2:63456300-63456319 | Msa0084160:intron | 45.0% | |
ATGTCTGGATGGCCCATTAA+CGG | + | chr1_2:63456409-63456428 | None:intergenic | 45.0% | |
TCAATGAGTGGATGTCTGGA+TGG | + | chr1_2:63456420-63456439 | None:intergenic | 45.0% | |
! | CATTAATAATGGGACCACCG+CGG | - | chr1_2:63456730-63456749 | Msa0084160:intron | 45.0% |
! | TGCATTGATATGGTGGTCGT+CGG | + | chr1_2:63456788-63456807 | None:intergenic | 45.0% |
!!! | GTATGTCAGACTCTGGCTTT+TGG | + | chr1_2:63457367-63457386 | None:intergenic | 45.0% |
AAAGTCTCTCTCGGTGATTG+AGG | - | chr1_2:63457637-63457656 | Msa0084160:intron | 45.0% | |
! | GGGGACACCTCTTTTGTATT+AGG | + | chr1_2:63457762-63457781 | None:intergenic | 45.0% |
!! | AATACAAAAGAGGTGTCCCC+AGG | - | chr1_2:63457762-63457781 | Msa0084160:intron | 45.0% |
CTCAACACCCTCAAGAACTA+GGG | + | chr1_2:63458222-63458241 | None:intergenic | 45.0% | |
ACTCAACACCCTCAAGAACT+AGG | + | chr1_2:63458223-63458242 | None:intergenic | 45.0% | |
TTGAGTTTGGGGGAGAGATA+TGG | + | chr1_2:63458393-63458412 | None:intergenic | 45.0% | |
ACAAGCTCTCATTGGAGAGT+GGG | + | chr1_2:63459116-63459135 | None:intergenic | 45.0% | |
! | CGATGGTGCACTAGGTATTT+TGG | + | chr1_2:63459497-63459516 | None:intergenic | 45.0% |
CTTGATATCGATGGTGCACT+AGG | + | chr1_2:63459505-63459524 | None:intergenic | 45.0% | |
GTGCGCTTGGTATCTTGTTA+AGG | + | chr1_2:63459750-63459769 | None:intergenic | 45.0% | |
TCTACGCAACAGAGGTTACT+TGG | - | chr1_2:63460033-63460052 | Msa0084160:intron | 45.0% | |
CTACGCAACAGAGGTTACTT+GGG | - | chr1_2:63460034-63460053 | Msa0084160:intron | 45.0% | |
! | TTATTCATGCGGGTTGTCGT+CGG | + | chr1_2:63460254-63460273 | None:intergenic | 45.0% |
TTCGCTGATCATTGGGTCAT+TGG | + | chr1_2:63461088-63461107 | None:intergenic | 45.0% | |
TGAATCCGTCTTTCGTGTGT+CGG | + | chr1_2:63461510-63461529 | None:intergenic | 45.0% | |
TTGTGCTGCGTATAGGCATA+TGG | + | chr1_2:63461639-63461658 | None:intergenic | 45.0% | |
TCCAACAAGTGGTATCAGAG+CGG | + | chr1_2:63461968-63461987 | None:intergenic | 45.0% | |
!! | AGGCATAAAGGTACCGATTG+AGG | + | chr1_2:63462252-63462271 | None:intergenic | 45.0% |
TGCCTCAAGTTCTCTTCAGA+TGG | - | chr1_2:63456298-63456317 | Msa0084160:intron | 45.0% | |
GCCTCAAGTTCTCTTCAGAT+GGG | - | chr1_2:63456299-63456318 | Msa0084160:intron | 45.0% | |
CCTCAAGTTCTCTTCAGATG+GGG | - | chr1_2:63456300-63456319 | Msa0084160:intron | 45.0% | |
ATGTCTGGATGGCCCATTAA+CGG | + | chr1_2:63456409-63456428 | None:intergenic | 45.0% | |
TCAATGAGTGGATGTCTGGA+TGG | + | chr1_2:63456420-63456439 | None:intergenic | 45.0% | |
GACAAAGCTAGCATCATTGC+CGG | + | chr1_2:63462746-63462765 | None:intergenic | 45.0% | |
TCATTCGTAGTAGAGACCAC+CGG | - | chr1_2:63462775-63462794 | Msa0084160:intron | 45.0% | |
ATGAAATGGGAATGGGTGAC+TGG | - | chr1_2:63463015-63463034 | Msa0084160:intron | 45.0% | |
TGTGTTAGAGGGAGAGTCAT+AGG | + | chr1_2:63463064-63463083 | None:intergenic | 45.0% | |
! | GTTGTTGTCACTTACCCCAA+TGG | - | chr1_2:63463090-63463109 | Msa0084160:intron | 45.0% |
GACCAAACCTAACCGTGTTA+GGG | + | chr1_2:63463161-63463180 | None:intergenic | 45.0% | |
AGACCAAACCTAACCGTGTT+AGG | + | chr1_2:63463162-63463181 | None:intergenic | 45.0% | |
! | ACGGTTAGGTTTGGTCTATC+TGG | - | chr1_2:63463165-63463184 | Msa0084160:CDS | 45.0% |
CTATCTGGTGCTTCAGTAAC+TGG | - | chr1_2:63463180-63463199 | Msa0084160:CDS | 45.0% | |
!! | TATTATTATTATAGTATATT+TGG | + | chr1_2:63458311-63458330 | None:intergenic | 5.0% |
! | ACCTGGAGATGAAGCTTTGG+TGG | - | chr1_2:63456174-63456193 | Msa0084160:CDS | 50.0% |
AACATCAACACGGTTAGCGG+CGG | - | chr1_2:63456243-63456262 | Msa0084160:CDS | 50.0% | |
!! | AGGCATAAAGGTACCGGTTG+AGG | + | chr1_2:63456283-63456302 | None:intergenic | 50.0% |
CCCCATCTGAAGAGAACTTG+AGG | + | chr1_2:63456303-63456322 | None:intergenic | 50.0% | |
GGTCCCCAATATACCGTACA+TGG | + | chr1_2:63456342-63456361 | None:intergenic | 50.0% | |
GGACTCAATGAGTGGATGTC+TGG | + | chr1_2:63456424-63456443 | None:intergenic | 50.0% | |
TAGCCCAAGTGGGAGATTGT+TGG | + | chr1_2:63456618-63456637 | None:intergenic | 50.0% | |
CATTGATATGGTGGTCGTCG+GGG | + | chr1_2:63456786-63456805 | None:intergenic | 50.0% | |
! | GCATTGATATGGTGGTCGTC+GGG | + | chr1_2:63456787-63456806 | None:intergenic | 50.0% |
GACAAGCTCTCATTGGAGAG+TGG | + | chr1_2:63459117-63459136 | None:intergenic | 50.0% | |
GTGGATAATAGGACGCCCAA+AGG | + | chr1_2:63459872-63459891 | None:intergenic | 50.0% | |
TGGGCGTCCTATTATCCACA+TGG | - | chr1_2:63459873-63459892 | Msa0084160:intron | 50.0% | |
GAGTCGAATCTACGCAACAG+AGG | - | chr1_2:63460025-63460044 | Msa0084160:intron | 50.0% | |
! | TAAGGAAGGCACAACTTGGC+CGG | + | chr1_2:63460228-63460247 | None:intergenic | 50.0% |
GCCAAGTTGTGCCTTCCTTA+GGG | - | chr1_2:63460228-63460247 | Msa0084160:intron | 50.0% | |
AGGGTTGTCGAGTGACCTTA+TGG | + | chr1_2:63460471-63460490 | None:intergenic | 50.0% | |
ACCGCTCTGATACCACTTGT+TGG | - | chr1_2:63461964-63461983 | Msa0084160:intron | 50.0% | |
! | ACCTGGAGATGAAGCTTTGG+TGG | - | chr1_2:63456174-63456193 | Msa0084160:CDS | 50.0% |
AACATCAACACGGTTAGCGG+CGG | - | chr1_2:63456243-63456262 | Msa0084160:CDS | 50.0% | |
CCCCATCTGAAGAGAACTTG+AGG | + | chr1_2:63456303-63456322 | None:intergenic | 50.0% | |
GGTCCCCAATATACCGTACA+TGG | + | chr1_2:63456342-63456361 | None:intergenic | 50.0% | |
GGACTCAATGAGTGGATGTC+TGG | + | chr1_2:63456424-63456443 | None:intergenic | 50.0% | |
! | TCCATCAGTTGGAGCGTTTC+CGG | + | chr1_2:63462797-63462816 | None:intergenic | 50.0% |
GGTGGAATCACAGTGTCTTG+TGG | + | chr1_2:63462838-63462857 | None:intergenic | 50.0% | |
CTGTACTCCCTAACACGGTT+AGG | - | chr1_2:63463151-63463170 | Msa0084160:CDS | 50.0% | |
CTCCCTAACACGGTTAGGTT+TGG | - | chr1_2:63463156-63463175 | Msa0084160:CDS | 50.0% | |
CAGCACACGACATCCATTCA+TGG | - | chr1_2:63463205-63463224 | Msa0084160:CDS | 50.0% | |
CGTTTGAGCATCCCCTTGGA+AGG | + | chr1_2:63455951-63455970 | None:intergenic | 55.0% | |
GCCACCAAAGCTTCATCTCC+AGG | + | chr1_2:63456178-63456197 | None:intergenic | 55.0% | |
GGCCAAGTTGTGCCTTCCTT+GGG | - | chr1_2:63459948-63459967 | Msa0084160:intron | 55.0% | |
GCCAAGTTGTGCCTTCCTTG+GGG | - | chr1_2:63459949-63459968 | Msa0084160:intron | 55.0% | |
GGCCAAGTTGTGCCTTCCTT+AGG | - | chr1_2:63459948-63459967 | Msa0084160:intron | 55.0% | |
! | GCCCTAAGGAAGGCACAACT+TGG | + | chr1_2:63460232-63460251 | None:intergenic | 55.0% |
GCCACCAAAGCTTCATCTCC+AGG | + | chr1_2:63456178-63456197 | None:intergenic | 55.0% | |
ATTGCCGGCAGTGTCCCAAA+GGG | + | chr1_2:63462731-63462750 | None:intergenic | 55.0% | |
! | ATCAGTTGGAGCGTTTCCGG+TGG | + | chr1_2:63462794-63462813 | None:intergenic | 55.0% |
ACCGGAAACGCTCCAACTGA+TGG | - | chr1_2:63462793-63462812 | Msa0084160:intron | 55.0% | |
! | CGTGCACTTTCTGAGTTGGG+TGG | + | chr1_2:63462856-63462875 | None:intergenic | 55.0% |
ACGGTTAGCGGCGGCTGATT+TGG | - | chr1_2:63456252-63456271 | Msa0084160:CDS | 60.0% | |
TATGCCAGTGACGACAGCCG+CGG | + | chr1_2:63456750-63456769 | None:intergenic | 60.0% | |
CGGCCAAGTTGTGCCTTCCT+TGG | - | chr1_2:63459947-63459966 | Msa0084160:intron | 60.0% | |
! | GCCCCAAGGAAGGCACAACT+TGG | + | chr1_2:63459953-63459972 | None:intergenic | 60.0% |
GTTGTCGTCGGCCCTAAGGA+AGG | + | chr1_2:63460242-63460261 | None:intergenic | 60.0% | |
ACGGTTAGCGGCGGCTGATT+TGG | - | chr1_2:63456252-63456271 | Msa0084160:CDS | 60.0% | |
TAACCCCACCCGTGTCCCTT+TGG | - | chr1_2:63462713-63462732 | Msa0084160:intron | 60.0% | |
AACCCCACCCGTGTCCCTTT+GGG | - | chr1_2:63462714-63462733 | Msa0084160:intron | 60.0% | |
TGTCCCAAAGGGACACGGGT+GGG | + | chr1_2:63462720-63462739 | None:intergenic | 60.0% | |
GCAGTGTCCCAAAGGGACAC+GGG | + | chr1_2:63462724-63462743 | None:intergenic | 60.0% | |
GGCAGTGTCCCAAAGGGACA+CGG | + | chr1_2:63462725-63462744 | None:intergenic | 60.0% | |
!! | GTGTCCCTTTGGGACACTGC+CGG | - | chr1_2:63462724-63462743 | Msa0084160:intron | 60.0% |
CATTGCCGGCAGTGTCCCAA+AGG | + | chr1_2:63462732-63462751 | None:intergenic | 60.0% | |
GTTGTCGTCGGCCCCAAGGA+AGG | + | chr1_2:63459963-63459982 | None:intergenic | 65.0% | |
GTCCCAAAGGGACACGGGTG+GGG | + | chr1_2:63462719-63462738 | None:intergenic | 65.0% | |
GTGTCCCAAAGGGACACGGG+TGG | + | chr1_2:63462721-63462740 | None:intergenic | 65.0% | |
ACCACCGCGGCTGTCGTCAC+TGG | - | chr1_2:63456743-63456762 | Msa0084160:intron | 70.0% | |
GCGAGTTGTCGTCGGCCCCA+AGG | + | chr1_2:63459967-63459986 | None:intergenic | 70.0% | |
! | GCGGGTTGTCGTCGGCCCTA+AGG | + | chr1_2:63460246-63460265 | None:intergenic | 70.0% |
GCCAGTGACGACAGCCGCGG+TGG | + | chr1_2:63456747-63456766 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_2 | gene | 63455785 | 63463293 | 63455785 | ID=Msa0084160;Name=Msa0084160 |
chr1_2 | mRNA | 63455785 | 63463293 | 63455785 | ID=Msa0084160-mRNA-1;Parent=Msa0084160;Name=Msa0084160-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0|0|1|0|0|2|0|220 |
chr1_2 | exon | 63463137 | 63463293 | 63463137 | ID=Msa0084160-mRNA-1:exon:21247;Parent=Msa0084160-mRNA-1 |
chr1_2 | exon | 63455785 | 63456290 | 63455785 | ID=Msa0084160-mRNA-1:exon:21246;Parent=Msa0084160-mRNA-1 |
chr1_2 | CDS | 63463137 | 63463293 | 63463137 | ID=Msa0084160-mRNA-1:cds;Parent=Msa0084160-mRNA-1 |
chr1_2 | CDS | 63455785 | 63456290 | 63455785 | ID=Msa0084160-mRNA-1:cds;Parent=Msa0084160-mRNA-1 |
Gene Sequence |
Protein sequence |