AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0642550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0642550 MtrunA17_Chr4g0028151 98.327 777 13 0 1 777 1 777 0.0 1572
Msa0642550 MtrunA17_Chr4g0028141 84.203 747 110 4 34 777 32 773 0.0 1275
Msa0642550 MtrunA17_Chr8g0362241 72.830 530 126 5 252 768 15 539 0.0 782
Msa0642550 MtrunA17_Chr7g0251371 38.949 647 372 8 148 773 765 1409 2.86e-160 501
Msa0642550 MtrunA17_Chr8g0362251 62.205 127 47 1 131 256 72 198 2.69e-48 169
Msa0642550 MtrunA17_Chr2g0298731 26.378 508 291 18 273 745 123 582 7.24e-34 140
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0642550 AT1G08130.1 65.535 795 251 10 1 777 1 790 0.0 1034
Msa0642550 AT1G49250.1 61.674 681 219 6 106 777 10 657 0.0 828
Msa0642550 AT1G66730.1 38.854 646 371 8 145 768 748 1391 9.00e-152 479
Msa0642550 AT5G57160.1 25.000 564 334 22 252 774 104 619 1.78e-25 114
Msa0642550 AT5G57160.2 27.304 293 171 10 516 774 1 285 3.22e-15 80.5

Find 209 sgRNAs with CRISPR-Local

Find 637 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGCATGTCATTTGGAATT+TGG 0.074641 4_3:-44299689 Msa0642550:three_prime_UTR
ATCCAACATGATTAGGTATT+TGG 0.104802 4_3:-44299769 Msa0642550:three_prime_UTR
TCAAAAGGAGACTGAATTTC+AGG 0.197824 4_3:+44304889 None:intergenic
TTTGATTTGTTGTACCTTAA+TGG 0.213245 4_3:-44302760 Msa0642550:CDS
ATTGAGACAGATACATTTCT+TGG 0.216627 4_3:-44304357 Msa0642550:intron
ACAGATTAAGATTCAGTATA+AGG 0.259053 4_3:-44307413 Msa0642550:intron
TGGTGATGCTTCGATTATTA+AGG 0.267756 4_3:-44307467 Msa0642550:CDS
ACAGAGAATCCTTCCTTTCC+AGG 0.271926 4_3:-44303065 Msa0642550:intron
TGATGACGTGTTTCGGATCT+TGG 0.280786 4_3:+44307786 None:intergenic
GGAGTAAAATCACACTTCTT+TGG 0.283745 4_3:+44304574 None:intergenic
ATTGGCGGGAAGATGGATTT+GGG 0.287865 4_3:+44308196 None:intergenic
TTGAGTGGCGATGGAGGAAT+AGG 0.294261 4_3:+44307901 None:intergenic
AATTGGCGGGAAGATGGATT+TGG 0.295135 4_3:+44308195 None:intergenic
TCCGTTTCTGTTTCTCTGTT+TGG 0.297444 4_3:-44307653 Msa0642550:CDS
AAGCATGTCATTTGGAATTT+GGG 0.297527 4_3:-44299688 Msa0642550:three_prime_UTR
CCCACTGCAGCTCGGTAAAC+AGG 0.304641 4_3:+44300336 None:intergenic
ACCTCTTTCGACGAAGAATC+TGG 0.312752 4_3:-44302180 Msa0642550:CDS
AGCCTGATGCTTTGACTATT+AGG 0.315018 4_3:-44306768 Msa0642550:CDS
TTCTTCATGAACGGTTTCTT+CGG 0.315297 4_3:+44307816 None:intergenic
ACTTCTTATCCAACATGATT+AGG 0.322885 4_3:-44299776 Msa0642550:three_prime_UTR
TCCGAGTTCGGTTGTTTGTT+GGG 0.323669 4_3:-44307692 Msa0642550:CDS
ACAAGCAATACCAGGCATAT+TGG 0.325644 4_3:+44299647 None:intergenic
CGCTCCTTACGGATGGTGTA+TGG 0.331064 4_3:-44304603 Msa0642550:CDS
GGCGCATGAAGGGTTGGAAT+TGG 0.333543 4_3:-44307494 Msa0642550:CDS
GAAACTGAAGAAAGATTATA+TGG 0.336761 4_3:-44301248 Msa0642550:CDS
ATGCGCAAATACCTATTGTT+TGG 0.342722 4_3:+44299712 None:intergenic
TTTCAAAGCATTTGTAAGAT+AGG 0.347737 4_3:-44300858 Msa0642550:intron
TCGAAGATGATGACGTGTTT+CGG 0.353089 4_3:+44307779 None:intergenic
GAAGAAGTGCTTGGCCATTA+AGG 0.354488 4_3:+44302746 None:intergenic
GGGAGCAGGGACCTTAGGTT+TGG 0.355278 4_3:+44300668 None:intergenic
ATCCGAGTTCGGTTGTTTGT+TGG 0.357249 4_3:-44307693 Msa0642550:CDS
CTATCATGATACTGCACTTA+AGG 0.368955 4_3:-44299481 Msa0642550:three_prime_UTR
GGAACAAAACTAAGTGTGTT+TGG 0.372805 4_3:+44299505 None:intergenic
TGTAGCTTTGAGTGACATAA+AGG 0.375806 4_3:-44302803 Msa0642550:CDS
GGAGAGAGGGAGTGAGAGAA+TGG 0.378469 4_3:+44308053 None:intergenic
TGCCTGGTATTGCTTGTGTT+TGG 0.382315 4_3:-44299641 Msa0642550:three_prime_UTR
CAAGCAATACCAGGCATATT+GGG 0.385762 4_3:+44299648 None:intergenic
TGAGTGGCGATGGAGGAATA+GGG 0.388833 4_3:+44307902 None:intergenic
CAAAGGTAGGATCAGGATAA+AGG 0.389369 4_3:+44299395 None:intergenic
TCACTAGATTTGGTACCTAT+TGG 0.390041 4_3:-44301131 Msa0642550:CDS
TTCCAGACAAAATTGCGAAT+TGG 0.396547 4_3:-44304985 Msa0642550:intron
TTACTCCTGGTGTTCCGGTT+GGG 0.398083 4_3:-44304558 Msa0642550:CDS
AACCTACATTGAAACATTAT+CGG 0.399806 4_3:+44299589 None:intergenic
TGCGCATCAAGCATGTCATT+TGG 0.401243 4_3:-44299696 Msa0642550:three_prime_UTR
GCCTGCTCAGGAGCTTTGTC+AGG 0.402859 4_3:+44300123 None:intergenic
AGATGTAATTGGCGGGAAGA+TGG 0.403238 4_3:+44308189 None:intergenic
TCTTCATGAACGGTTTCTTC+GGG 0.403400 4_3:+44307817 None:intergenic
TAATGGCCAAGCACTTCTTC+AGG 0.406702 4_3:-44302743 Msa0642550:CDS
TATAAATGTTCACAGGAATC+TGG 0.409892 4_3:-44305171 Msa0642550:intron
GAAGGGTTGGAATTGGGAAT+TGG 0.414979 4_3:-44307487 Msa0642550:CDS
ATATATAATCCGTTTGCTAC+AGG 0.417845 4_3:-44305076 Msa0642550:intron
TATAGGGGACTCACTAGATT+TGG 0.419918 4_3:-44301141 Msa0642550:CDS
ATTGGTGCTTTCCACGGTCG+TGG 0.420071 4_3:-44301113 Msa0642550:CDS
CCTCCAAGCGGTCACTCAAC+TGG 0.422032 4_3:-44301273 Msa0642550:CDS
TCAGACGAGGAGGCCTGCTC+AGG 0.423980 4_3:+44300111 None:intergenic
TAATGGAGGCTCCAAACAAT+AGG 0.424609 4_3:-44299723 Msa0642550:three_prime_UTR
CCATGGTGTAATTAAGCTAA+TGG 0.425294 4_3:-44299740 Msa0642550:three_prime_UTR
TTGTCGAAGGCGGAGGGTGG+TGG 0.431407 4_3:+44308000 None:intergenic
CAGATACATTTCTTGGAGAA+TGG 0.437323 4_3:-44304350 Msa0642550:CDS
TTTACTCCTGGTGTTCCGGT+TGG 0.439220 4_3:-44304559 Msa0642550:CDS
TACACCGGAGGATCTTGTTC+CGG 0.442280 4_3:-44307548 Msa0642550:CDS
GGCGAGTTTCGATCCGAGTT+CGG 0.444692 4_3:-44307704 Msa0642550:CDS
AGAGGGAGTGAGAGAATGGA+AGG 0.445413 4_3:+44308057 None:intergenic
GCGCATGAAGGGTTGGAATT+GGG 0.446162 4_3:-44307493 Msa0642550:CDS
GCCTGACAAAGCTCCTGAGC+AGG 0.451547 4_3:-44300124 Msa0642550:CDS
ATGTTGTTGCTGCAGTTTCA+AGG 0.451764 4_3:-44304274 Msa0642550:intron
AAAATAACAAAGGTAGGATC+AGG 0.452693 4_3:+44299388 None:intergenic
ACACAATCACAATGACAAAC+AGG 0.454140 4_3:-44299941 Msa0642550:CDS
TGCTAACATCCACTCTGAAA+TGG 0.455762 4_3:+44308152 None:intergenic
CTCTGAAATGGTGTTGCGGC+GGG 0.463180 4_3:+44308164 None:intergenic
TTCCGCGTCTAGTTCGAGTT+CGG 0.467023 4_3:-44300146 Msa0642550:CDS
AGCTCGGTAAACAGGGCTAA+TGG 0.467833 4_3:+44300344 None:intergenic
CGACCGTGGAAAGCACCAAT+AGG 0.468385 4_3:+44301116 None:intergenic
GGAGCAGGGACCTTAGGTTT+GGG 0.471254 4_3:+44300669 None:intergenic
TTCCTAATAGTCAAAGCATC+AGG 0.474419 4_3:+44306766 None:intergenic
AATTGTGTCTGCGCTCCTTA+CGG 0.474618 4_3:-44304614 Msa0642550:CDS
TTCGACGATAAATAAACAAC+CGG 0.475389 4_3:+44307529 None:intergenic
CCAGTTGAGTGACCGCTTGG+AGG 0.476893 4_3:+44301273 None:intergenic
GAAACTGCAGCAACAACATC+AGG 0.477339 4_3:+44304278 None:intergenic
CCCTGTTTACCGAGCTGCAG+TGG 0.477713 4_3:-44300337 Msa0642550:CDS
AATCAATCAATCCTGATGTA+TGG 0.482280 4_3:-44300543 Msa0642550:CDS
TCCCGATAATGTTTCAATGT+AGG 0.483474 4_3:-44299591 Msa0642550:three_prime_UTR
TTTGACAGCATAGGCCCAAC+CGG 0.485180 4_3:+44304544 None:intergenic
CAGCCAGTTGAGTGACCGCT+TGG 0.486186 4_3:+44301270 None:intergenic
TGTACTCTGACCTAGCTTGA+AGG 0.486426 4_3:+44299801 None:intergenic
GGTAAACAGGGCTAATGGTC+AGG 0.487201 4_3:+44300349 None:intergenic
ACCTACATTGAAACATTATC+GGG 0.488728 4_3:+44299590 None:intergenic
GGGAATAGTCGCTGAATTGA+AGG 0.489755 4_3:-44307755 Msa0642550:CDS
CAGAGAAACAGAAACGGAAC+AGG 0.491931 4_3:+44307658 None:intergenic
TTCTTTCATTTAGGTGTGGG+AGG 0.492239 4_3:-44300385 Msa0642550:intron
CTGACCTAGCTTGAAGGTAA+AGG 0.493868 4_3:+44299807 None:intergenic
TCCCAACAAACAACCGAACT+CGG 0.494341 4_3:+44307691 None:intergenic
CAACAAGAAGTGACTTTATG+TGG 0.495053 4_3:+44305121 None:intergenic
GTACCTATTGGTGCTTTCCA+CGG 0.495362 4_3:-44301119 Msa0642550:CDS
CATGAGTTTGTCGAAGGCGG+AGG 0.496025 4_3:+44307993 None:intergenic
AATTAACTTACCTCTTCAAA+AGG 0.498329 4_3:+44304874 None:intergenic
CACGGTCGTGGGAAACGTAC+AGG 0.499402 4_3:-44301101 Msa0642550:intron
TGACAGGACAAAGGTGACTT+AGG 0.501127 4_3:-44306835 Msa0642550:intron
GGTCGGTGGTTCTTCATGAA+CGG 0.501284 4_3:+44307807 None:intergenic
TAATGTCTTGTAGGAGTGTA+TGG 0.501516 4_3:-44300921 Msa0642550:intron
TCCAGATTCTTCGTCGAAAG+AGG 0.501881 4_3:+44302179 None:intergenic
GGAGATGATGAAGGTGGAGA+GGG 0.501993 4_3:+44307940 None:intergenic
GAGTGGCGATGGAGGAATAG+GGG 0.506153 4_3:+44307903 None:intergenic
CAGAAGGGACCCAATATGCC+TGG 0.507478 4_3:-44299657 Msa0642550:three_prime_UTR
TGCGGCGGGATAGATGTAAT+TGG 0.510437 4_3:+44308178 None:intergenic
CGCTTGCTGAGGCGTGTGGA+AGG 0.510484 4_3:-44307444 Msa0642550:CDS
CATCTTAACATTTACTCACA+TGG 0.510521 4_3:+44299835 None:intergenic
GCCTTCGACAAACTCATGTC+TGG 0.511626 4_3:-44307988 Msa0642550:CDS
AGCAAACGGATTATATATAG+AGG 0.513938 4_3:+44305081 None:intergenic
AGTCGCTGAATTGAAGGAAA+AGG 0.514554 4_3:-44307749 Msa0642550:CDS
TAAAATTTCAGATACACCCT+TGG 0.516201 4_3:+44304516 None:intergenic
CAAACTCTCTTAGCTGCCTT+AGG 0.516969 4_3:-44304952 Msa0642550:CDS
CTCGCGTCAAACCATACATC+AGG 0.517938 4_3:+44300532 None:intergenic
AGAATTGCGCCGGCGCATGA+AGG 0.520567 4_3:-44307505 Msa0642550:CDS
CTTCAGTGTACACAGCAGCT+TGG 0.521080 4_3:+44304929 None:intergenic
GATTATTAAGGCGCTTGCTG+AGG 0.522455 4_3:-44307455 Msa0642550:CDS
GCAGGCCTCCTCGTCTGAGC+AGG 0.524759 4_3:-44300106 Msa0642550:intron
AATTCCAACCCTTCATGCGC+CGG 0.528853 4_3:+44307496 None:intergenic
CTCATGGCATCTCGATATGT+TGG 0.530577 4_3:-44299419 Msa0642550:three_prime_UTR
GCCAAACAGAGAAACAGAAA+CGG 0.531840 4_3:+44307652 None:intergenic
ATGCAACAAGTTCACAATCA+AGG 0.533772 4_3:+44303101 None:intergenic
CCGCTTGGAGGGTTCATATG+TGG 0.534655 4_3:+44301285 None:intergenic
TCCGCAGCTGAAGAAGAAAC+CGG 0.534838 4_3:-44307725 Msa0642550:CDS
AGAAATGCTGAACGGAACAC+TGG 0.537995 4_3:-44304308 Msa0642550:CDS
TGCGCCGGCGCATGAAGGGT+TGG 0.538670 4_3:-44307500 Msa0642550:CDS
AACATTTCATCTAATTGCAA+AGG 0.540065 4_3:-44306734 Msa0642550:intron
GCTCCTTACGGATGGTGTAT+GGG 0.544184 4_3:-44304602 Msa0642550:CDS
GGCGAGGAGTGGAGGAGAGA+GGG 0.547227 4_3:+44308040 None:intergenic
CGGCGAGGAGTGGAGGAGAG+AGG 0.550622 4_3:+44308039 None:intergenic
ATACGATGGAGAGCGTGCTC+AGG 0.551459 4_3:-44304455 Msa0642550:intron
GAGTGACGAAGAAAATTTGA+CGG 0.552014 4_3:+44308083 None:intergenic
AACAACATCAAATGATGTTG+AGG 0.552524 4_3:-44302136 Msa0642550:CDS
CAGTTGAGTGACCGCTTGGA+GGG 0.554490 4_3:+44301274 None:intergenic
ATCCAAACACAAGCAATACC+AGG 0.556064 4_3:+44299639 None:intergenic
GAATTGCAACCTGTAGCAAA+CGG 0.557122 4_3:+44305067 None:intergenic
GGGAGATGATGAAGGTGGAG+AGG 0.557440 4_3:+44307939 None:intergenic
CGACATTGCGCGGCGAGGAG+TGG 0.558536 4_3:+44308029 None:intergenic
ATAGGCCCAACCGGAACACC+AGG 0.558999 4_3:+44304553 None:intergenic
GTACACAGCAGCTTGGCCTA+AGG 0.560199 4_3:+44304936 None:intergenic
ATGAGATTACCTGGAAAGGA+AGG 0.560383 4_3:+44303056 None:intergenic
GCCGGTTTCTTCTTCAGCTG+CGG 0.560705 4_3:+44307724 None:intergenic
GGAGACTGAATTTCAGGAGG+CGG 0.562772 4_3:+44304895 None:intergenic
AAATCCTTTACCTTCAAGCT+AGG 0.563170 4_3:-44299811 Msa0642550:three_prime_UTR
TGATGCTTTGACTATTAGGA+AGG 0.564438 4_3:-44306764 Msa0642550:CDS
TTGGCGGGAAGATGGATTTG+GGG 0.564683 4_3:+44308197 None:intergenic
TAAGTGCAGTATCATGATAG+AGG 0.564739 4_3:+44299484 None:intergenic
TTGGTGCTTTCCACGGTCGT+GGG 0.565855 4_3:-44301112 Msa0642550:CDS
CATTGCGCGGCGAGGAGTGG+AGG 0.567800 4_3:+44308032 None:intergenic
GAGGGAGTGAGAGAATGGAA+GGG 0.569043 4_3:+44308058 None:intergenic
TAAAGTGATTCCCAAACCTA+AGG 0.571507 4_3:-44300679 Msa0642550:intron
CCTGTTTACCGAGCTGCAGT+GGG 0.571614 4_3:-44300336 Msa0642550:CDS
TGCCAAATACCTAATCATGT+TGG 0.571918 4_3:+44299767 None:intergenic
TTGACAAAGCCATTGATGCA+AGG 0.578584 4_3:-44302098 Msa0642550:intron
GGCAATGAGATTACCTGGAA+AGG 0.580861 4_3:+44303052 None:intergenic
TGGGAATCACTTTAGAGCGA+AGG 0.581370 4_3:+44300688 None:intergenic
ACAACCGGAACAAGATCCTC+CGG 0.582042 4_3:+44307544 None:intergenic
GCGGGATAGATGTAATTGGC+GGG 0.582190 4_3:+44308182 None:intergenic
ACGGAAATGCGAGTAGTGAA+CGG 0.583116 4_3:+44308102 None:intergenic
AAACACGTCATCATCTTCGA+AGG 0.584902 4_3:-44307776 Msa0642550:CDS
GGCTCTACTTTGCAGTATAG+GGG 0.588353 4_3:-44301156 Msa0642550:intron
ATCGTCGAATAGAATTGCGC+CGG 0.588902 4_3:-44307515 Msa0642550:CDS
GAAATGCTGAACGGAACACT+GGG 0.591346 4_3:-44304307 Msa0642550:CDS
GAATTGCGCCGGCGCATGAA+GGG 0.595193 4_3:-44307504 Msa0642550:CDS
TTTCAGACATACTATAAATG+TGG 0.596096 4_3:-44300568 Msa0642550:intron
TCCACTCTGAAATGGTGTTG+CGG 0.601859 4_3:+44308160 None:intergenic
GACGTGTTTCGGATCTTGGT+CGG 0.602038 4_3:+44307790 None:intergenic
GTGTCTGCGCTCCTTACGGA+TGG 0.606059 4_3:-44304610 Msa0642550:CDS
GTTCCCATACACCATCCGTA+AGG 0.607762 4_3:+44304599 None:intergenic
GGGCATAGTAGATTCCAGTA+AGG 0.609210 4_3:-44300316 Msa0642550:intron
CCACTGCAGCTCGGTAAACA+GGG 0.610534 4_3:+44300337 None:intergenic
GGCGGGATAGATGTAATTGG+CGG 0.610708 4_3:+44308181 None:intergenic
AACTGTGATACATGCTACAC+CGG 0.611772 4_3:-44307563 Msa0642550:CDS
ATGAGTTTGTCGAAGGCGGA+GGG 0.613187 4_3:+44307994 None:intergenic
AAGGCGCTTGCTGAGGCGTG+TGG 0.616663 4_3:-44307448 Msa0642550:CDS
TAGGTATTTGGCATACACCA+TGG 0.617785 4_3:-44299757 Msa0642550:three_prime_UTR
AGTTTGTCGAAGGCGGAGGG+TGG 0.619661 4_3:+44307997 None:intergenic
TATGCTGTCAAAAGCAACCA+AGG 0.619881 4_3:-44304533 Msa0642550:CDS
GTGTTTCGGATCTTGGTCGG+TGG 0.619881 4_3:+44307793 None:intergenic
AGACATGAGTTTGTCGAAGG+CGG 0.622901 4_3:+44307990 None:intergenic
TGGCGGGAAGATGGATTTGG+GGG 0.625700 4_3:+44308198 None:intergenic
CTACTATGCCCACTGCAGCT+CGG 0.628696 4_3:+44300328 None:intergenic
GATATGATTAACGAAGAGAG+TGG 0.632135 4_3:-44307625 Msa0642550:CDS
AACACGTCATCATCTTCGAA+GGG 0.638680 4_3:-44307775 Msa0642550:CDS
ACTCTGAAATGGTGTTGCGG+CGG 0.641629 4_3:+44308163 None:intergenic
GCCAGACATGAGTTTGTCGA+AGG 0.643145 4_3:+44307987 None:intergenic
TTTGACGACATTGCGCGGCG+AGG 0.649965 4_3:+44308024 None:intergenic
AAAGGAGACTGAATTTCAGG+AGG 0.653188 4_3:+44304892 None:intergenic
TTAACAGCATGAGAAAAGCA+AGG 0.656075 4_3:+44299886 None:intergenic
GTACTTTACCTGCTCAGACG+AGG 0.665242 4_3:+44300098 None:intergenic
CCATTAGCTTAATTACACCA+TGG 0.665759 4_3:+44299740 None:intergenic
GCATCATAGACTGAGAAGAA+CGG 0.671258 4_3:+44306794 None:intergenic
AGAGTTAGCGAACTGTGCGG+CGG 0.671889 4_3:-44299546 Msa0642550:three_prime_UTR
ATGCTGTCAAAAGCAACCAA+GGG 0.671976 4_3:-44304532 Msa0642550:CDS
TGGTGTAATTAAGCTAATGG+AGG 0.676426 4_3:-44299737 Msa0642550:three_prime_UTR
TCTAGAGTTAGCGAACTGTG+CGG 0.684270 4_3:-44299549 Msa0642550:three_prime_UTR
GAACTCGGATCGAAACTCGC+CGG 0.689493 4_3:+44307706 None:intergenic
GGCCGAACTCGAACTAGACG+CGG 0.689546 4_3:+44300144 None:intergenic
TGTGATACATGCTACACCGG+AGG 0.695818 4_3:-44307560 Msa0642550:CDS
CTGTACGTTTCCCACGACCG+TGG 0.697906 4_3:+44301102 None:intergenic
ACGTGTGAATACAAATACGA+TGG 0.698464 4_3:-44304469 Msa0642550:CDS
GTTCTTCTCAGTCTATGATG+CGG 0.698544 4_3:-44306792 Msa0642550:CDS
TGTATGGTTTGACGCGAGTG+AGG 0.702585 4_3:-44300527 Msa0642550:intron
CCACATATGAACCCTCCAAG+CGG 0.704525 4_3:-44301285 Msa0642550:CDS
CTTTACCTGCTCAGACGAGG+AGG 0.708129 4_3:+44300101 None:intergenic
AAACTTGAAAATCCGCAGAG+AGG 0.710310 4_3:-44302719 Msa0642550:intron
GTGCTATGACAACGATAACG+AGG 0.711736 4_3:-44300883 Msa0642550:CDS
TAAAAGGCGTTACCTCTCTG+CGG 0.712518 4_3:+44302707 None:intergenic
TTTACAGTAGAAATGCTGAA+CGG 0.714187 4_3:-44304316 Msa0642550:CDS
GCCGCAACACCATTTCAGAG+TGG 0.731500 4_3:-44308161 Msa0642550:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAACAATAAAATTAAAAT+TGG + chr4_3:44300131-44300150 None:intergenic 10.0%
!!! ATTTTAATTTTATTGTTGTT+AGG - chr4_3:44300131-44300150 Msa0642550:CDS 10.0%
!! ATAATAAAATAATATGGATA+TGG - chr4_3:44303619-44303638 Msa0642550:intron 10.0%
!! AAAAATAATTGTTCAAATTA+TGG + chr4_3:44306127-44306146 None:intergenic 10.0%
!! TTAAAAATGATAACAAAAAT+AGG + chr4_3:44306463-44306482 None:intergenic 10.0%
!! ATAAACAAAAAAAATTAGAT+GGG + chr4_3:44307031-44307050 None:intergenic 10.0%
!! AATAAACAAAAAAAATTAGA+TGG + chr4_3:44307032-44307051 None:intergenic 10.0%
!!! TTTTATTTTTTCTGAATAAA+GGG - chr4_3:44307322-44307341 Msa0642550:intron 10.0%
!! AATATAAGAAAAAATAACAA+AGG + chr4_3:44308130-44308149 None:intergenic 10.0%
!!! ATATTATGTACTTTATTTTT+TGG - chr4_3:44308145-44308164 Msa0642550:exon 10.0%
!!! TATTATGTACTTTATTTTTT+GGG - chr4_3:44308146-44308165 Msa0642550:exon 10.0%
!! GTATAATCTAATAACTTAAA+AGG + chr4_3:44300917-44300936 None:intergenic 15.0%
!! TAAAACTAATTACCAAAAAA+TGG + chr4_3:44301131-44301150 None:intergenic 15.0%
!!! TTTTAATGACAAATATCAAA+AGG + chr4_3:44301235-44301254 None:intergenic 15.0%
!! AAAAGTAATGATATTGTTAA+CGG - chr4_3:44302045-44302064 Msa0642550:intron 15.0%
!! TCATATTAAATAAGAAAAGA+TGG - chr4_3:44302245-44302264 Msa0642550:intron 15.0%
!!! TAAGTTAATTTTATTGAAGT+AGG - chr4_3:44302644-44302663 Msa0642550:intron 15.0%
!!! AAGTTAATTTTATTGAAGTA+GGG - chr4_3:44302645-44302664 Msa0642550:intron 15.0%
!! AAAACATACTATTAGATAAA+AGG + chr4_3:44302795-44302814 None:intergenic 15.0%
!!! TGAAATTTTAAATAAGTTTC+AGG - chr4_3:44303002-44303021 Msa0642550:intron 15.0%
!!! AACAAAATTATTGAAGTTTT+AGG - chr4_3:44303361-44303380 Msa0642550:intron 15.0%
!!! ACAAAATTATTGAAGTTTTA+GGG - chr4_3:44303362-44303381 Msa0642550:intron 15.0%
!!! TTTAACCTTTTAATTAGAAT+AGG - chr4_3:44303385-44303404 Msa0642550:intron 15.0%
!!! TTAACCTTTTAATTAGAATA+GGG - chr4_3:44303386-44303405 Msa0642550:intron 15.0%
!! AAAGGAGAAAAAATAATATT+CGG - chr4_3:44303595-44303614 Msa0642550:intron 15.0%
!! TTCGGAATAATAAAATAATA+TGG - chr4_3:44303613-44303632 Msa0642550:intron 15.0%
!! ATTAAGCTATAAAAAGAAAA+AGG - chr4_3:44303802-44303821 Msa0642550:intron 15.0%
!! TTTGACATAAATGTATATTA+AGG - chr4_3:44303887-44303906 Msa0642550:intron 15.0%
!! TTGACATAAATGTATATTAA+GGG - chr4_3:44303888-44303907 Msa0642550:intron 15.0%
!! AAAAAAGAATTAAAGTAGAT+AGG - chr4_3:44304996-44305015 Msa0642550:intron 15.0%
!!! TCTTTTCTTTTTTATTTTGA+GGG - chr4_3:44305141-44305160 Msa0642550:CDS 15.0%
!! AGATAGAAATTTCATTATTT+AGG - chr4_3:44305487-44305506 Msa0642550:intron 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG + chr4_3:44305649-44305668 None:intergenic 15.0%
!! GAAAAAAATTAAAGTTGTAT+TGG + chr4_3:44305689-44305708 None:intergenic 15.0%
!! TATTATCAAAAACATTTGAT+AGG - chr4_3:44306045-44306064 Msa0642550:intron 15.0%
!! GTTAATTTATACATTTAACT+CGG - chr4_3:44306538-44306557 Msa0642550:intron 15.0%
!! ATTATTATCTTCTTTCATTT+AGG - chr4_3:44307111-44307130 Msa0642550:intron 15.0%
!!! AAATTTGAATTGATGATAAA+AGG - chr4_3:44307221-44307240 Msa0642550:intron 15.0%
!!! CTTTTATTTTTTCTGAATAA+AGG - chr4_3:44307321-44307340 Msa0642550:intron 15.0%
!! AGGAAATAAATTGAATTATT+TGG - chr4_3:44307490-44307509 Msa0642550:CDS 15.0%
!! AAAATACCACTTAACTTTAA+AGG - chr4_3:44300156-44300175 Msa0642550:CDS 20.0%
!!! AATTTTCCTTTAAAGTTAAG+TGG + chr4_3:44300165-44300184 None:intergenic 20.0%
!! TAGAAATGACAATATTAGAT+AGG - chr4_3:44300323-44300342 Msa0642550:CDS 20.0%
!! AGAAATGACAATATTAGATA+GGG - chr4_3:44300324-44300343 Msa0642550:CDS 20.0%
!! CTATATTCTAATTCTACTAT+AGG + chr4_3:44300363-44300382 None:intergenic 20.0%
!! GAATTAGAATATAGAAAAGA+TGG - chr4_3:44300369-44300388 Msa0642550:CDS 20.0%
!!! GTTTCTATTATAGTTTTTCT+AGG + chr4_3:44300487-44300506 None:intergenic 20.0%
!!! TAATGAGTTGAATAGATATA+CGG - chr4_3:44300528-44300547 Msa0642550:CDS 20.0%
!!! TTTGGTAATTAGTTTTAATG+TGG - chr4_3:44301134-44301153 Msa0642550:CDS 20.0%
!!! ACAATATCATTACTTTTCAA+TGG + chr4_3:44302042-44302061 None:intergenic 20.0%
!! AAAGTAATGATATTGTTAAC+GGG - chr4_3:44302046-44302065 Msa0642550:intron 20.0%
!! TCTTTAAATAACACAAAGAT+CGG + chr4_3:44302158-44302177 None:intergenic 20.0%
!! ATTAGATAAAAGGAAAAGAT+TGG + chr4_3:44302785-44302804 None:intergenic 20.0%
!!! AAATACAAATTCAAGTTGTT+CGG + chr4_3:44303341-44303360 None:intergenic 20.0%
!!! TTATTTTTTCTCCTTTTGTA+AGG + chr4_3:44303591-44303610 None:intergenic 20.0%
!!! GTCTTTTCTTTTTTATTTTG+AGG - chr4_3:44305140-44305159 Msa0642550:CDS 20.0%
!! TATCATGTATCTTAAATAAG+TGG - chr4_3:44305235-44305254 Msa0642550:intron 20.0%
!!! TTATTTAGGTTGTAGTTATA+TGG - chr4_3:44305501-44305520 Msa0642550:intron 20.0%
!! AGTACTAAATTAAGTAGAAA+TGG + chr4_3:44305596-44305615 None:intergenic 20.0%
!!! TGTCTTTTTCTTATAAAGTA+AGG - chr4_3:44305889-44305908 Msa0642550:intron 20.0%
!!! GTCTTTTTCTTATAAAGTAA+GGG - chr4_3:44305890-44305909 Msa0642550:intron 20.0%
!! AAATGGAATGAAATAATCAT+TGG + chr4_3:44305938-44305957 None:intergenic 20.0%
!! AAAGATTATATGGAAAAGTA+AGG - chr4_3:44306267-44306286 Msa0642550:intron 20.0%
!! AAGATTATATGGAAAAGTAA+GGG - chr4_3:44306268-44306287 Msa0642550:intron 20.0%
!! ATGTGTTTCCATTTATTTAT+CGG - chr4_3:44306328-44306347 Msa0642550:intron 20.0%
!!! TTATAGTATGTCTGAAATAT+AGG + chr4_3:44306934-44306953 None:intergenic 20.0%
!!! AATTTTTTCAAATACCTTAC+TGG + chr4_3:44307206-44307225 None:intergenic 20.0%
!! AAAAGGATTACAACTTAATT+TGG - chr4_3:44307238-44307257 Msa0642550:intron 20.0%
!! TAAGAAAAAATAACAAAGGT+AGG + chr4_3:44308126-44308145 None:intergenic 20.0%
! ACAGATTAAGATTCAGTATA+AGG - chr4_3:44300092-44300111 Msa0642550:intron 25.0%
! TTAGAATATAGAAAAGATGG+TGG - chr4_3:44300372-44300391 Msa0642550:CDS 25.0%
! AACATTTCATCTAATTGCAA+AGG - chr4_3:44300771-44300790 Msa0642550:intron 25.0%
!!! AAAGTTGATTTTTCAATGCA+TGG - chr4_3:44300885-44300904 Msa0642550:CDS 25.0%
!!! AAGTTGATTTTTCAATGCAT+GGG - chr4_3:44300886-44300905 Msa0642550:CDS 25.0%
!!! TTGTAGTTTTATAATCTTGC+AGG - chr4_3:44301362-44301381 Msa0642550:intron 25.0%
! TGAGATATGCAAAAAGTTAA+GGG + chr4_3:44301500-44301519 None:intergenic 25.0%
! TTGTCATGTGAAAAAATAGA+GGG + chr4_3:44301531-44301550 None:intergenic 25.0%
! TTTGTCATGTGAAAAAATAG+AGG + chr4_3:44301532-44301551 None:intergenic 25.0%
!!! GTATTCAGAATTGTTTTGAA+CGG + chr4_3:44301585-44301604 None:intergenic 25.0%
! AATACTTACATATGAGTTAG+TGG - chr4_3:44301637-44301656 Msa0642550:intron 25.0%
! ATACTTACATATGAGTTAGT+GGG - chr4_3:44301638-44301657 Msa0642550:intron 25.0%
!!! TTTTTTTTGCAATCACGTTT+TGG - chr4_3:44301774-44301793 Msa0642550:intron 25.0%
!!! TTTTTTTGCAATCACGTTTT+GGG - chr4_3:44301775-44301794 Msa0642550:intron 25.0%
!! ATACTAGAGATTTGAAATGA+AGG - chr4_3:44301939-44301958 Msa0642550:intron 25.0%
!! TACTAGAGATTTGAAATGAA+GGG - chr4_3:44301940-44301959 Msa0642550:intron 25.0%
!! ATTTGAAATGAAGGGATAAA+AGG - chr4_3:44301948-44301967 Msa0642550:intron 25.0%
! ATAACAGTGTTAAGTCAAAA+AGG - chr4_3:44302072-44302091 Msa0642550:intron 25.0%
! TAACAGTGTTAAGTCAAAAA+GGG - chr4_3:44302073-44302092 Msa0642550:intron 25.0%
!! ATAAGAAAAGATGGATTTGT+TGG - chr4_3:44302254-44302273 Msa0642550:intron 25.0%
!! TGCTATGCTTATAATTTTGT+GGG - chr4_3:44302464-44302483 Msa0642550:intron 25.0%
! ACTTCACTATGTTAATTACT+TGG - chr4_3:44302490-44302509 Msa0642550:intron 25.0%
! AATTAACTTACCTCTTCAAA+AGG + chr4_3:44302634-44302653 None:intergenic 25.0%
!!! TTTTTGTTTCATTTTGCATC+AGG - chr4_3:44302819-44302838 Msa0642550:CDS 25.0%
! AAAGCCCTATTCTAATTAAA+AGG + chr4_3:44303393-44303412 None:intergenic 25.0%
! GTTTCGACAAACTATATTTA+AGG - chr4_3:44303661-44303680 Msa0642550:intron 25.0%
! TTTAGAAATCAATCGTAAAG+AGG - chr4_3:44303687-44303706 Msa0642550:intron 25.0%
! AAATGTATATTAAGGGTGAT+CGG - chr4_3:44303895-44303914 Msa0642550:intron 25.0%
! TGGTAAAAGAAAAGAATCAT+AGG - chr4_3:44303932-44303951 Msa0642550:intron 25.0%
!! GATATTAGAGTTTCAGATTT+TGG - chr4_3:44303967-44303986 Msa0642550:intron 25.0%
! TGACAAAGACAGATAATATA+GGG - chr4_3:44304011-44304030 Msa0642550:intron 25.0%
! TAATCAGTAGTCCTATAATT+AGG + chr4_3:44304190-44304209 None:intergenic 25.0%
! TATCTCAACATATTAGTAAC+TGG + chr4_3:44304229-44304248 None:intergenic 25.0%
! AAATTCTATTTGAAAGCAAC+TGG + chr4_3:44304312-44304331 None:intergenic 25.0%
! TCAAACACAATATCAGAAAT+TGG + chr4_3:44304614-44304633 None:intergenic 25.0%
! TTATAACCTTATATCTTGAC+AGG - chr4_3:44304654-44304673 Msa0642550:CDS 25.0%
!!! TTTGATTTGTTGTACCTTAA+TGG - chr4_3:44304745-44304764 Msa0642550:intron 25.0%
! ATTAGCAATGCAAAGATAAA+AGG + chr4_3:44304817-44304836 None:intergenic 25.0%
! TCTTATATTTACATGGACAA+TGG + chr4_3:44304948-44304967 None:intergenic 25.0%
! ATTGTCCATGTAAATATAAG+AGG - chr4_3:44304947-44304966 Msa0642550:CDS 25.0%
!!! GAAGAAATAGTATTTTTGAG+AGG - chr4_3:44305084-44305103 Msa0642550:CDS 25.0%
! AAGTAGAAAAGAGATTCAAT+CGG + chr4_3:44305174-44305193 None:intergenic 25.0%
! TAAAAAAAACCTTGCATCAA+TGG + chr4_3:44305419-44305438 None:intergenic 25.0%
! GAAACTGAAGAAAGATTATA+TGG - chr4_3:44306257-44306276 Msa0642550:intron 25.0%
! ATGTAACATACTCTTTAATG+TGG - chr4_3:44306432-44306451 Msa0642550:intron 25.0%
! TTCAGATGTAGTTGAAATAT+CGG + chr4_3:44306487-44306506 None:intergenic 25.0%
! ATTTCAACTACATCTGAATA+TGG - chr4_3:44306489-44306508 Msa0642550:intron 25.0%
! AATTTATACATTTAACTCGG+TGG - chr4_3:44306541-44306560 Msa0642550:intron 25.0%
! TTAGTAACATAATGTCTTGT+AGG - chr4_3:44306575-44306594 Msa0642550:intron 25.0%
!! TTTCAAAGCATTTGTAAGAT+AGG - chr4_3:44306647-44306666 Msa0642550:intron 25.0%
!! TTATGTTGTATAGAAGTGTA+TGG - chr4_3:44306678-44306697 Msa0642550:intron 25.0%
! AAAAAAAAGTGAGAAAAGCA+AGG + chr4_3:44306713-44306732 None:intergenic 25.0%
! AAGAATAAGTGAGAAACTAT+TGG + chr4_3:44306737-44306756 None:intergenic 25.0%
! TTTCAGACATACTATAAATG+TGG - chr4_3:44306937-44306956 Msa0642550:intron 25.0%
!!! TAGCTTTTAACTTCTATTGA+TGG - chr4_3:44307296-44307315 Msa0642550:intron 25.0%
! TCCTATCATATATAGTTAGT+CGG + chr4_3:44307451-44307470 None:intergenic 25.0%
! AACCTACATTGAAACATTAT+CGG + chr4_3:44307919-44307938 None:intergenic 25.0%
!!! TTTTTCTTTCACTTTTCTCA+CGG + chr4_3:44308191-44308210 None:intergenic 25.0%
!!! AACTGCAACTATTTTTATAC+TGG + chr4_3:44308218-44308237 None:intergenic 25.0%
!!! ATAGGGGATTTTCGTTTTTT+GGG + chr4_3:44299589-44299608 None:intergenic 30.0%
!! AATAGGGGATTTTCGTTTTT+TGG + chr4_3:44299590-44299609 None:intergenic 30.0%
TTCGACGATAAATAAACAAC+CGG + chr4_3:44299979-44299998 None:intergenic 30.0%
GTTATAAGACTAGACGAAAT+AGG - chr4_3:44300298-44300317 Msa0642550:intron 30.0%
ACAATATTAGATAGGGAGTT+GGG - chr4_3:44300331-44300350 Msa0642550:CDS 30.0%
!! TAGAAAAGATGGTGGAAATT+AGG - chr4_3:44300380-44300399 Msa0642550:intron 30.0%
ACTCAAATCATTAGAAACAG+AGG - chr4_3:44300457-44300476 Msa0642550:intron 30.0%
TTGAATAGATATACGGCATA+TGG - chr4_3:44300535-44300554 Msa0642550:CDS 30.0%
!!! ATTGTTGTTTTGTTGTTGAC+AGG - chr4_3:44300654-44300673 Msa0642550:intron 30.0%
! AGGTACTTTACTGTCAATTT+TGG - chr4_3:44300791-44300810 Msa0642550:intron 30.0%
AGATAATCTCAAAACTCATG+TGG + chr4_3:44301181-44301200 None:intergenic 30.0%
!!! GATTATCTGATTTTGAAGCT+TGG - chr4_3:44301193-44301212 Msa0642550:intron 30.0%
! ATGTCTTTTGCTAAAAGCAA+AGG - chr4_3:44301388-44301407 Msa0642550:intron 30.0%
!!! TTGCTGAATGTTAGTTTTTG+TGG - chr4_3:44301424-44301443 Msa0642550:intron 30.0%
GAGATATGCAAAAAGTTAAG+GGG + chr4_3:44301499-44301518 None:intergenic 30.0%
GTGAGATATGCAAAAAGTTA+AGG + chr4_3:44301501-44301520 None:intergenic 30.0%
!!! TATGAGTTAGTGGGTTTTTT+TGG - chr4_3:44301647-44301666 Msa0642550:intron 30.0%
!!! ATCACGTTTTGGGATAAAAA+TGG - chr4_3:44301785-44301804 Msa0642550:intron 30.0%
!!! TCACGTTTTGGGATAAAAAT+GGG - chr4_3:44301786-44301805 Msa0642550:intron 30.0%
ATGGGGAAAACCAAATTAAT+AGG - chr4_3:44301804-44301823 Msa0642550:intron 30.0%
!!! GATGTCGTGGATTTTTTTAT+GGG - chr4_3:44301826-44301845 Msa0642550:intron 30.0%
!!! ATGTCGTGGATTTTTTTATG+GGG - chr4_3:44301827-44301846 Msa0642550:intron 30.0%
GTTTGAAAAACTTACAGCAA+CGG - chr4_3:44301970-44301989 Msa0642550:intron 30.0%
!! ATTAATAGTTGGTGGTTTAG+TGG - chr4_3:44301994-44302013 Msa0642550:intron 30.0%
!! TGACGATTTTAGGTGAATTT+AGG - chr4_3:44302103-44302122 Msa0642550:CDS 30.0%
!! GACGATTTTAGGTGAATTTA+GGG - chr4_3:44302104-44302123 Msa0642550:CDS 30.0%
!! ACGATTTTAGGTGAATTTAG+GGG - chr4_3:44302105-44302124 Msa0642550:CDS 30.0%
! TGTTATTTAAAGAGACCTCA+TGG - chr4_3:44302165-44302184 Msa0642550:CDS 30.0%
GTTATTTAAAGAGACCTCAT+GGG - chr4_3:44302166-44302185 Msa0642550:CDS 30.0%
ATGTTGCAAGTTAATATGCA+TGG - chr4_3:44302216-44302235 Msa0642550:intron 30.0%
!! AAGATGGATTTGTTGGAATT+TGG - chr4_3:44302261-44302280 Msa0642550:intron 30.0%
TATAAATGTTCACAGGAATC+TGG - chr4_3:44302334-44302353 Msa0642550:intron 30.0%
!! AGCAAACGGATTATATATAG+AGG + chr4_3:44302427-44302446 None:intergenic 30.0%
! ATATATAATCCGTTTGCTAC+AGG - chr4_3:44302429-44302448 Msa0642550:intron 30.0%
! CTGCTATGCTTATAATTTTG+TGG - chr4_3:44302463-44302482 Msa0642550:intron 30.0%
! TTTTATTGAAGTAGGGTGAA+TGG - chr4_3:44302652-44302671 Msa0642550:intron 30.0%
!! GTGCTTTGTTTAAAACCTTT+CGG - chr4_3:44302681-44302700 Msa0642550:intron 30.0%
!! TGCTTTGTTTAAAACCTTTC+GGG - chr4_3:44302682-44302701 Msa0642550:intron 30.0%
! GACACAATTTTGTCATAATC+AGG + chr4_3:44302880-44302899 None:intergenic 30.0%
TAAAATTTCAGATACACCCT+TGG + chr4_3:44302992-44303011 None:intergenic 30.0%
ATTGAGACAGATACATTTCT+TGG - chr4_3:44303148-44303167 Msa0642550:intron 30.0%
TTTACAGTAGAAATGCTGAA+CGG - chr4_3:44303189-44303208 Msa0642550:intron 30.0%
GTTCGGAAAATGTTCATAAT+TGG + chr4_3:44303324-44303343 None:intergenic 30.0%
GATGAGATTTAATGATCCAA+CGG + chr4_3:44303469-44303488 None:intergenic 30.0%
!! TTTCAGATTTTGGAGAAACT+CGG - chr4_3:44303977-44303996 Msa0642550:intron 30.0%
GTGACAAAGACAGATAATAT+AGG - chr4_3:44304010-44304029 Msa0642550:intron 30.0%
AAAGACAGATAATATAGGGA+TGG - chr4_3:44304015-44304034 Msa0642550:intron 30.0%
AGATAATATAGGGATGGTAA+TGG - chr4_3:44304021-44304040 Msa0642550:intron 30.0%
TTTAGTCCTTTCGATGTAAA+GGG - chr4_3:44304076-44304095 Msa0642550:intron 30.0%
GTAGTCCTATAATTAGGATT+CGG + chr4_3:44304184-44304203 None:intergenic 30.0%
TTTGCCACCCATAAAAATAA+AGG + chr4_3:44304482-44304501 None:intergenic 30.0%
! TGTGTTGTGTTACCTTTTAT+TGG - chr4_3:44304576-44304595 Msa0642550:CDS 30.0%
AAAGCTGAATCACCAATAAA+AGG + chr4_3:44304591-44304610 None:intergenic 30.0%
GAATTAAAGTAGATAGGTCA+AGG - chr4_3:44305002-44305021 Msa0642550:intron 30.0%
GAGACTCAATTTGAGAAATA+GGG - chr4_3:44305038-44305057 Msa0642550:intron 30.0%
AGACTCAATTTGAGAAATAG+GGG - chr4_3:44305039-44305058 Msa0642550:intron 30.0%
CAAGAACTTTATTATCCCAT+GGG - chr4_3:44305113-44305132 Msa0642550:CDS 30.0%
!!! TTTTTTATTTTGAGGGAAGC+AGG - chr4_3:44305148-44305167 Msa0642550:CDS 30.0%
AACAACATCAAATGATGTTG+AGG - chr4_3:44305369-44305388 Msa0642550:intron 30.0%
!! TTTAGGTTGTAGTTATATGG+TGG - chr4_3:44305504-44305523 Msa0642550:intron 30.0%
! TTAGGTTGTAGTTATATGGT+GGG - chr4_3:44305505-44305524 Msa0642550:intron 30.0%
!! AAGTGACACTCATTTTGAAA+CGG + chr4_3:44305623-44305642 None:intergenic 30.0%
AAAAGTTAGAGAGGGTAAAA+AGG + chr4_3:44305839-44305858 None:intergenic 30.0%
TGTATGAGAAAAGTTAGAGA+GGG + chr4_3:44305847-44305866 None:intergenic 30.0%
TTGTATGAGAAAAGTTAGAG+AGG + chr4_3:44305848-44305867 None:intergenic 30.0%
CAACTGAAAATCAAGAGATA+AGG + chr4_3:44306165-44306184 None:intergenic 30.0%
AAGTAGAGCCGATAAATAAA+TGG + chr4_3:44306339-44306358 None:intergenic 30.0%
CTCACTTATTCTTCATGTTA+TGG - chr4_3:44306744-44306763 Msa0642550:CDS 30.0%
ACTTATTCTTCATGTTATGG+TGG - chr4_3:44306747-44306766 Msa0642550:CDS 30.0%
CTTATTCTTCATGTTATGGT+GGG - chr4_3:44306748-44306767 Msa0642550:CDS 30.0%
AATCAATCAATCCTGATGTA+TGG - chr4_3:44306962-44306981 Msa0642550:intron 30.0%
TATCTTCTTTCATTTAGGTG+TGG - chr4_3:44307116-44307135 Msa0642550:intron 30.0%
ATCTTCTTTCATTTAGGTGT+GGG - chr4_3:44307117-44307136 Msa0642550:intron 30.0%
TTAGTCGGATAATGAAAGAT+TGG + chr4_3:44307436-44307455 None:intergenic 30.0%
TCCGACTAACTATATATGAT+AGG - chr4_3:44307447-44307466 Msa0642550:CDS 30.0%
TTCTTTAACCACTTTCTTTC+AGG - chr4_3:44307516-44307535 Msa0642550:CDS 30.0%
CATCTTAACATTTACTCACA+TGG + chr4_3:44307673-44307692 None:intergenic 30.0%
ACTTCTTATCCAACATGATT+AGG - chr4_3:44307729-44307748 Msa0642550:CDS 30.0%
ATCCAACATGATTAGGTATT+TGG - chr4_3:44307736-44307755 Msa0642550:CDS 30.0%
! AAGCATGTCATTTGGAATTT+GGG - chr4_3:44307817-44307836 Msa0642550:CDS 30.0%
!!! AATTTGGGTCTTTTTTCAGA+AGG - chr4_3:44307832-44307851 Msa0642550:CDS 30.0%
!!! ATTTGGGTCTTTTTTCAGAA+GGG - chr4_3:44307833-44307852 Msa0642550:CDS 30.0%
ACCTACATTGAAACATTATC+GGG + chr4_3:44307918-44307937 None:intergenic 30.0%
AAAATAACAAAGGTAGGATC+AGG + chr4_3:44308120-44308139 None:intergenic 30.0%
GAGTGACGAAGAAAATTTGA+CGG + chr4_3:44299425-44299444 None:intergenic 35.0%
!!! GTTGTTGTTAGGGTTTTGAA+CGG + chr4_3:44299641-44299660 None:intergenic 35.0%
!!! GGGTTTTAAGGTTGTTGTTA+GGG + chr4_3:44299651-44299670 None:intergenic 35.0%
!!! AGGGTTTTAAGGTTGTTGTT+AGG + chr4_3:44299652-44299671 None:intergenic 35.0%
TTCTTCATGAACGGTTTCTT+CGG + chr4_3:44299692-44299711 None:intergenic 35.0%
GATATGATTAACGAAGAGAG+TGG - chr4_3:44299880-44299899 Msa0642550:intron 35.0%
! TGGTGATGCTTCGATTATTA+AGG - chr4_3:44300038-44300057 Msa0642550:intron 35.0%
TCTATCTCATACAACATCGT+CGG + chr4_3:44300207-44300226 None:intergenic 35.0%
AGATAAATTAAGTGTAGCCG+AGG - chr4_3:44300254-44300273 Msa0642550:intron 35.0%
!! CTAGTCTTATAACACATCGA+AGG + chr4_3:44300291-44300310 None:intergenic 35.0%
GACAATATTAGATAGGGAGT+TGG - chr4_3:44300330-44300349 Msa0642550:CDS 35.0%
CAATATTAGATAGGGAGTTG+GGG - chr4_3:44300332-44300351 Msa0642550:CDS 35.0%
!!! TTTTGTTGTTGACAGGACAA+AGG - chr4_3:44300661-44300680 Msa0642550:intron 35.0%
! TTCCTAATAGTCAAAGCATC+AGG + chr4_3:44300742-44300761 None:intergenic 35.0%
TGATGCTTTGACTATTAGGA+AGG - chr4_3:44300741-44300760 Msa0642550:intron 35.0%
!!! TGTCAATTTTGGAGCTTAAG+TGG - chr4_3:44300802-44300821 Msa0642550:intron 35.0%
!!! GTCAATTTTGGAGCTTAAGT+GGG - chr4_3:44300803-44300822 Msa0642550:intron 35.0%
CTATCAGTGTAGCCAAATAT+CGG - chr4_3:44300936-44300955 Msa0642550:intron 35.0%
ATGTCTCAGTCAATTTGTGA+AGG - chr4_3:44300980-44300999 Msa0642550:intron 35.0%
AGTCAATTTGTGAAGGATAG+TGG - chr4_3:44300987-44301006 Msa0642550:intron 35.0%
! GGCGTTTTATGCTGAATTTT+AGG - chr4_3:44301016-44301035 Msa0642550:intron 35.0%
! ACATCCTTCATTGATAACAC+TGG - chr4_3:44301056-44301075 Msa0642550:intron 35.0%
!!! TTGAAGCACATGCCATTTTT+TGG - chr4_3:44301116-44301135 Msa0642550:CDS 35.0%
!!! ATTAGTTTTAATGTGGCCAC+TGG - chr4_3:44301141-44301160 Msa0642550:CDS 35.0%
!!! GGATTCAATATTTTGACCAG+TGG + chr4_3:44301160-44301179 None:intergenic 35.0%
TCAACATAGCGAACTGAATA+TGG + chr4_3:44301266-44301285 None:intergenic 35.0%
AGCTCTCATACACATTACAT+TGG + chr4_3:44301335-44301354 None:intergenic 35.0%
AGTTGTTCTGTGTTTGTGTT+TGG - chr4_3:44301455-44301474 Msa0642550:intron 35.0%
GTTGTTCTGTGTTTGTGTTT+GGG - chr4_3:44301456-44301475 Msa0642550:intron 35.0%
TTGTTCTGTGTTTGTGTTTG+GGG - chr4_3:44301457-44301476 Msa0642550:intron 35.0%
ATATGCAAAAAGTTAAGGGG+AGG + chr4_3:44301496-44301515 None:intergenic 35.0%
AGTATTGTAAGATGCTTCCA+TGG + chr4_3:44301623-44301642 None:intergenic 35.0%
!!! CACGTTTTGGGATAAAAATG+GGG - chr4_3:44301787-44301806 Msa0642550:intron 35.0%
ACCAAATTAATAGGATGTCG+TGG - chr4_3:44301813-44301832 Msa0642550:intron 35.0%
TCCACGACATCCTATTAATT+TGG + chr4_3:44301817-44301836 None:intergenic 35.0%
!!! GGATGTCGTGGATTTTTTTA+TGG - chr4_3:44301825-44301844 Msa0642550:intron 35.0%
ATGATTCACATGGGAATAAG+CGG - chr4_3:44301857-44301876 Msa0642550:intron 35.0%
!! TACACTCTGCAATGTTTTTG+TGG - chr4_3:44301882-44301901 Msa0642550:intron 35.0%
!! ACACTCTGCAATGTTTTTGT+GGG - chr4_3:44301883-44301902 Msa0642550:intron 35.0%
!! ATTTTAGGTGAATTTAGGGG+AGG - chr4_3:44302108-44302127 Msa0642550:CDS 35.0%
AACTTGCAACATAAACGCAA+GGG + chr4_3:44302208-44302227 None:intergenic 35.0%
! TAACTTGCAACATAAACGCA+AGG + chr4_3:44302209-44302228 None:intergenic 35.0%
CCTGTGAACATTTATAGCAA+GGG + chr4_3:44302330-44302349 None:intergenic 35.0%
TCCTGTGAACATTTATAGCA+AGG + chr4_3:44302331-44302350 None:intergenic 35.0%
CAACAAGAAGTGACTTTATG+TGG + chr4_3:44302387-44302406 None:intergenic 35.0%
TTCCAGACAAAATTGCGAAT+TGG - chr4_3:44302520-44302539 Msa0642550:intron 35.0%
! ATCCAATTCGCAATTTTGTC+TGG + chr4_3:44302525-44302544 None:intergenic 35.0%
TCAAAAGGAGACTGAATTTC+AGG + chr4_3:44302619-44302638 None:intergenic 35.0%
!! AATTCAGTCTCCTTTTGAAG+AGG - chr4_3:44302621-44302640 Msa0642550:intron 35.0%
GTGTCAATGCATTATGATGT+TGG - chr4_3:44302751-44302770 Msa0642550:CDS 35.0%
GGAGTAAAATCACACTTCTT+TGG + chr4_3:44302934-44302953 None:intergenic 35.0%
!! AAGAAGTGTGATTTTACTCC+TGG - chr4_3:44302934-44302953 Msa0642550:intron 35.0%
ACGTGTGAATACAAATACGA+TGG - chr4_3:44303036-44303055 Msa0642550:intron 35.0%
CAGATACATTTCTTGGAGAA+TGG - chr4_3:44303155-44303174 Msa0642550:intron 35.0%
! CTTTTGTAAGGCCAAGTTTA+TGG + chr4_3:44303579-44303598 None:intergenic 35.0%
!! CATAAACTTGGCCTTACAAA+AGG - chr4_3:44303577-44303596 Msa0642550:intron 35.0%
!! TAATGAGCTTTGCTTTAAGG+AGG + chr4_3:44303786-44303805 None:intergenic 35.0%
GCTTAATGAGCTTTGCTTTA+AGG + chr4_3:44303789-44303808 None:intergenic 35.0%
AAGTCAACTCAGACTAAAAG+AGG - chr4_3:44303852-44303871 Msa0642550:intron 35.0%
AGTCAACTCAGACTAAAAGA+GGG - chr4_3:44303853-44303872 Msa0642550:intron 35.0%
CTTTAGTCCTTTCGATGTAA+AGG - chr4_3:44304075-44304094 Msa0642550:intron 35.0%
AGACTCCGAATCCTAATTAT+AGG - chr4_3:44304176-44304195 Msa0642550:intron 35.0%
!! ATATTTTGCTGTCACTGAAC+AGG - chr4_3:44304352-44304371 Msa0642550:intron 35.0%
ATGCAACAAGTTCACAATCA+AGG + chr4_3:44304407-44304426 None:intergenic 35.0%
!!! TTGCCGGTCCTTTATTTTTA+TGG - chr4_3:44304471-44304490 Msa0642550:CDS 35.0%
!!! TGCCGGTCCTTTATTTTTAT+GGG - chr4_3:44304472-44304491 Msa0642550:CDS 35.0%
CACCCATAAAAATAAAGGAC+CGG + chr4_3:44304477-44304496 None:intergenic 35.0%
ACACAGACATTAGTTGCAAA+AGG + chr4_3:44304561-44304580 None:intergenic 35.0%
TAAGCACCTGTCAAGATATA+AGG + chr4_3:44304663-44304682 None:intergenic 35.0%
! ACTCAAAGCTACATTTTTGC+GGG + chr4_3:44304695-44304714 None:intergenic 35.0%
! CACTCAAAGCTACATTTTTG+CGG + chr4_3:44304696-44304715 None:intergenic 35.0%
!! TGTAGCTTTGAGTGACATAA+AGG - chr4_3:44304702-44304721 Msa0642550:intron 35.0%
CAGCTCCTCTTATATTTACA+TGG + chr4_3:44304955-44304974 None:intergenic 35.0%
AATATAAGAGGAGCTGAGTT+AGG - chr4_3:44304959-44304978 Msa0642550:CDS 35.0%
GGAGACTCAATTTGAGAAAT+AGG - chr4_3:44305037-44305056 Msa0642550:intron 35.0%
GACTCAATTTGAGAAATAGG+GGG - chr4_3:44305040-44305059 Msa0642550:intron 35.0%
GGGATAATAAAGTTCTTGCT+TGG + chr4_3:44305111-44305130 None:intergenic 35.0%
GCAAGAACTTTATTATCCCA+TGG - chr4_3:44305112-44305131 Msa0642550:CDS 35.0%
AAAGAAAAGACTCTTCCCAT+GGG + chr4_3:44305131-44305150 None:intergenic 35.0%
AAAAGAAAAGACTCTTCCCA+TGG + chr4_3:44305132-44305151 None:intergenic 35.0%
TAGAGATGCTGCAGAAAATT+AGG + chr4_3:44305304-44305323 None:intergenic 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG + chr4_3:44305740-44305759 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG - chr4_3:44305739-44305758 Msa0642550:intron 35.0%
TTGGCACACAGATTAAGAAA+TGG + chr4_3:44305955-44305974 None:intergenic 35.0%
!! TTCAAAATGAGTGTCGCTTT+AGG + chr4_3:44305980-44305999 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr4_3:44305981-44306000 Msa0642550:intron 35.0%
TAACTCAGCTCTTCCAAATT+TGG - chr4_3:44306092-44306111 Msa0642550:intron 35.0%
AACTCAGCTCTTCCAAATTT+GGG - chr4_3:44306093-44306112 Msa0642550:intron 35.0%
! TCTCTTGATTTTCAGTTGTG+AGG - chr4_3:44306167-44306186 Msa0642550:intron 35.0%
! CTCTTGATTTTCAGTTGTGA+GGG - chr4_3:44306168-44306187 Msa0642550:intron 35.0%
! TCACTAGATTTGGTACCTAT+TGG - chr4_3:44306374-44306393 Msa0642550:intron 35.0%
AACTACATCTGAATATGGCT+AGG - chr4_3:44306494-44306513 Msa0642550:intron 35.0%
! TAATGTCTTGTAGGAGTGTA+TGG - chr4_3:44306584-44306603 Msa0642550:intron 35.0%
TAAAGTGATTCCCAAACCTA+AGG - chr4_3:44306826-44306845 Msa0642550:CDS 35.0%
ATACAAGCAGAACTCAGAAA+TGG + chr4_3:44306887-44306906 None:intergenic 35.0%
TAGGAGATTGAGAAAGAGTA+AGG - chr4_3:44307466-44307485 Msa0642550:CDS 35.0%
ACACAATCACAATGACAAAC+AGG - chr4_3:44307564-44307583 Msa0642550:CDS 35.0%
TTAACAGCATGAGAAAAGCA+AGG + chr4_3:44307622-44307641 None:intergenic 35.0%
AAATCCTTTACCTTCAAGCT+AGG - chr4_3:44307694-44307713 Msa0642550:CDS 35.0%
TGCCAAATACCTAATCATGT+TGG + chr4_3:44307741-44307760 None:intergenic 35.0%
! CCATTAGCTTAATTACACCA+TGG + chr4_3:44307768-44307787 None:intergenic 35.0%
CCATGGTGTAATTAAGCTAA+TGG - chr4_3:44307765-44307784 Msa0642550:CDS 35.0%
TGGTGTAATTAAGCTAATGG+AGG - chr4_3:44307768-44307787 Msa0642550:CDS 35.0%
ATGCGCAAATACCTATTGTT+TGG + chr4_3:44307796-44307815 None:intergenic 35.0%
! CAAGCATGTCATTTGGAATT+TGG - chr4_3:44307816-44307835 Msa0642550:CDS 35.0%
TCCCGATAATGTTTCAATGT+AGG - chr4_3:44307914-44307933 Msa0642550:CDS 35.0%
GGAACAAAACTAAGTGTGTT+TGG + chr4_3:44308003-44308022 None:intergenic 35.0%
TAAGTGCAGTATCATGATAG+AGG + chr4_3:44308024-44308043 None:intergenic 35.0%
CTATCATGATACTGCACTTA+AGG - chr4_3:44308024-44308043 Msa0642550:CDS 35.0%
! TTACATTTTGTGCATGCTCA+TGG - chr4_3:44308070-44308089 Msa0642550:CDS 35.0%
! TGCTAACATCCACTCTGAAA+TGG + chr4_3:44299356-44299375 None:intergenic 40.0%
!! TTTTTGGGAGATGATGAAGG+TGG + chr4_3:44299574-44299593 None:intergenic 40.0%
!!! CGTTTTTTGGGAGATGATGA+AGG + chr4_3:44299577-44299596 None:intergenic 40.0%
!!! TAGGGTTTTGAACGGTATCT+GGG + chr4_3:44299633-44299652 None:intergenic 40.0%
!!! TTAGGGTTTTGAACGGTATC+TGG + chr4_3:44299634-44299653 None:intergenic 40.0%
!!! GAACGGTTTCTAGGGTTTTA+AGG + chr4_3:44299663-44299682 None:intergenic 40.0%
! GGGTTTTTGAACGGTTTCTA+GGG + chr4_3:44299671-44299690 None:intergenic 40.0%
!! GGTTTCTTCGGGTTTTTGAA+CGG + chr4_3:44299680-44299699 None:intergenic 40.0%
TCTTCATGAACGGTTTCTTC+GGG + chr4_3:44299691-44299710 None:intergenic 40.0%
! TCGAAGATGATGACGTGTTT+CGG + chr4_3:44299729-44299748 None:intergenic 40.0%
AAACACGTCATCATCTTCGA+AGG - chr4_3:44299729-44299748 Msa0642550:three_prime_UTR 40.0%
AACACGTCATCATCTTCGAA+GGG - chr4_3:44299730-44299749 Msa0642550:three_prime_UTR 40.0%
AGTCGCTGAATTGAAGGAAA+AGG - chr4_3:44299756-44299775 Msa0642550:three_prime_UTR 40.0%
! TCCGTTTCTGTTTCTCTGTT+TGG - chr4_3:44299852-44299871 Msa0642550:intron 40.0%
GCCAAACAGAGAAACAGAAA+CGG + chr4_3:44299856-44299875 None:intergenic 40.0%
AACTGTGATACATGCTACAC+CGG - chr4_3:44299942-44299961 Msa0642550:CDS 40.0%
!! AGATGGTGGAAATTAGGCTT+AGG - chr4_3:44300386-44300405 Msa0642550:intron 40.0%
! TAGAGCATTATGACGTCGTT+TGG - chr4_3:44300558-44300577 Msa0642550:CDS 40.0%
GCATCATAGACTGAGAAGAA+CGG + chr4_3:44300714-44300733 None:intergenic 40.0%
GTTCTTCTCAGTCTATGATG+CGG - chr4_3:44300713-44300732 Msa0642550:CDS 40.0%
AGCCTGATGCTTTGACTATT+AGG - chr4_3:44300737-44300756 Msa0642550:intron 40.0%
!! GGGATTGCTGTTTGAGATAT+TGG - chr4_3:44300823-44300842 Msa0642550:intron 40.0%
AATCCTCCATAGCCGATATT+TGG + chr4_3:44300951-44300970 None:intergenic 40.0%
! GAATTTTAGGCTTTCTGCCA+TGG - chr4_3:44301029-44301048 Msa0642550:intron 40.0%
CAATGAAGGATGTAAGACCA+TGG + chr4_3:44301049-44301068 None:intergenic 40.0%
GTAGCCAGTGTTATCAATGA+AGG + chr4_3:44301063-44301082 None:intergenic 40.0%
!! GATAACACTGGCTACACTTT+TGG - chr4_3:44301068-44301087 Msa0642550:intron 40.0%
!!! ACTGGCTACACTTTTGGAAT+TGG - chr4_3:44301074-44301093 Msa0642550:intron 40.0%
GTTGATACTCGATCACGTTT+AGG - chr4_3:44301281-44301300 Msa0642550:CDS 40.0%
!!! TTGTTTTGAACGGACCTAGA+CGG + chr4_3:44301575-44301594 None:intergenic 40.0%
ATTGTAAGATGCTTCCATGG+TGG + chr4_3:44301620-44301639 None:intergenic 40.0%
TTGTGTGTTTCCATTCCTAC+AGG - chr4_3:44301673-44301692 Msa0642550:intron 40.0%
AAGAAACACACCTGTAGGAA+TGG + chr4_3:44301686-44301705 None:intergenic 40.0%
ATCACAAGAAACACACCTGT+AGG + chr4_3:44301691-44301710 None:intergenic 40.0%
GATACGCATCAACTTGTGAT+AGG + chr4_3:44301743-44301762 None:intergenic 40.0%
GGTGTGTGTATGATTCACAT+GGG - chr4_3:44301848-44301867 Msa0642550:intron 40.0%
!! CACTCTGCAATGTTTTTGTG+GGG - chr4_3:44301884-44301903 Msa0642550:intron 40.0%
ACAGCAACGGCATTAATAGT+TGG - chr4_3:44301983-44302002 Msa0642550:intron 40.0%
!! AATAGTTGGTGGTTTAGTGG+AGG - chr4_3:44301997-44302016 Msa0642550:intron 40.0%
! ACTTTTCAATGGACCAGATG+AGG + chr4_3:44302031-44302050 None:intergenic 40.0%
CAGTGTTAAGTCAAAAAGGG+AGG - chr4_3:44302076-44302095 Msa0642550:intron 40.0%
ATTTAAAGAGACCTCATGGG+AGG - chr4_3:44302169-44302188 Msa0642550:CDS 40.0%
AATTACACTAACCTCCCATG+AGG + chr4_3:44302183-44302202 None:intergenic 40.0%
! CCCTTGCTATAAATGTTCAC+AGG - chr4_3:44302327-44302346 Msa0642550:intron 40.0%
GAATTGCAACCTGTAGCAAA+CGG + chr4_3:44302441-44302460 None:intergenic 40.0%
AAAGGAGACTGAATTTCAGG+AGG + chr4_3:44302616-44302635 None:intergenic 40.0%
TCAGCTCAAAAAGTTGGAGA+CGG - chr4_3:44302709-44302728 Msa0642550:intron 40.0%
AAAAAGTTGGAGACGGTTAG+CGG - chr4_3:44302716-44302735 Msa0642550:intron 40.0%
! TGATTTTACTCCTGGTGTTC+CGG - chr4_3:44302942-44302961 Msa0642550:intron 40.0%
!!! TTGGTTGCTTTTGACAGCAT+AGG + chr4_3:44302973-44302992 None:intergenic 40.0%
TATGCTGTCAAAAGCAACCA+AGG - chr4_3:44302972-44302991 Msa0642550:intron 40.0%
ATGCTGTCAAAAGCAACCAA+GGG - chr4_3:44302973-44302992 Msa0642550:intron 40.0%
! CATAAGCAGTGTGTTTCTGA+TGG + chr4_3:44303098-44303117 None:intergenic 40.0%
ATGTTGTTGCTGCAGTTTCA+AGG - chr4_3:44303231-44303250 Msa0642550:intron 40.0%
GTGGAAAACAAGCTTATGCA+TGG + chr4_3:44303447-44303466 None:intergenic 40.0%
!! ATAAGCTTGTTTTCCACCGT+TGG - chr4_3:44303450-44303469 Msa0642550:intron 40.0%
GAGATTTAATGATCCAACGG+TGG + chr4_3:44303466-44303485 None:intergenic 40.0%
!! CACAAGGTTGTTTCTACCAA+TGG + chr4_3:44303527-44303546 None:intergenic 40.0%
GGTAGAAACAACCTTGTGAA+TGG - chr4_3:44303529-44303548 Msa0642550:intron 40.0%
TATGTCTTGCACCATTCACA+AGG + chr4_3:44303543-44303562 None:intergenic 40.0%
TCCCTTGTGTACCATAAACT+TGG - chr4_3:44303565-44303584 Msa0642550:intron 40.0%
GCCAAGTTTATGGTACACAA+GGG + chr4_3:44303569-44303588 None:intergenic 40.0%
TTTCCTCCCTTTACATCGAA+AGG + chr4_3:44304085-44304104 None:intergenic 40.0%
! ATTTGTTGCGAGTGACATGT+TGG - chr4_3:44304135-44304154 Msa0642550:intron 40.0%
ATGAGATTACCTGGAAAGGA+AGG + chr4_3:44304452-44304471 None:intergenic 40.0%
TTTCCAGGTAATCTCATTGC+CGG - chr4_3:44304455-44304474 Msa0642550:intron 40.0%
!!! CGGTCCTTTATTTTTATGGG+TGG - chr4_3:44304475-44304494 Msa0642550:CDS 40.0%
AGTTGAATCCATGATAGAGC+TGG - chr4_3:44304867-44304886 Msa0642550:intron 40.0%
AGAATGCAACAGCTTCATCA+AGG + chr4_3:44304907-44304926 None:intergenic 40.0%
TTGACAAAGCCATTGATGCA+AGG - chr4_3:44305407-44305426 Msa0642550:intron 40.0%
ATAGAACTTAATAGCTGCCC+GGG + chr4_3:44305569-44305588 None:intergenic 40.0%
CATAGAACTTAATAGCTGCC+CGG + chr4_3:44305570-44305589 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr4_3:44305985-44306004 None:intergenic 40.0%
!!! TGACACTCATTTTGAAACGG+AGG + chr4_3:44305620-44305639 None:intergenic 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG - chr4_3:44305733-44305752 Msa0642550:intron 40.0%
CAGCCTCTTGTGTAAAAACA+GGG - chr4_3:44305734-44305753 Msa0642550:intron 40.0%
GTTGCGTACAATACACCAAA+TGG - chr4_3:44305761-44305780 Msa0642550:intron 40.0%
CGTACAATACACCAAATGGT+GGG - chr4_3:44305765-44305784 Msa0642550:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr4_3:44305985-44306004 Msa0642550:intron 40.0%
ATGGCAAGAGAACCCAAATT+TGG + chr4_3:44306108-44306127 None:intergenic 40.0%
TATAGGGGACTCACTAGATT+TGG - chr4_3:44306364-44306383 Msa0642550:intron 40.0%
ACAGCACAAAAAATCTCCCA+AGG + chr4_3:44306520-44306539 None:intergenic 40.0%
!! TTCTTCATGTTATGGTGGGT+AGG - chr4_3:44306752-44306771 Msa0642550:CDS 40.0%
TTCTTTCATTTAGGTGTGGG+AGG - chr4_3:44307120-44307139 Msa0642550:intron 40.0%
AGATTGAGAAAGAGTAAGGC+AGG - chr4_3:44307470-44307489 Msa0642550:CDS 40.0%
TTCAGCAACCTGAAAGAAAG+TGG + chr4_3:44307527-44307546 None:intergenic 40.0%
TAGGTATTTGGCATACACCA+TGG - chr4_3:44307748-44307767 Msa0642550:CDS 40.0%
TAATGGAGGCTCCAAACAAT+AGG - chr4_3:44307782-44307801 Msa0642550:CDS 40.0%
CAAGCAATACCAGGCATATT+GGG + chr4_3:44307860-44307879 None:intergenic 40.0%
ACAAGCAATACCAGGCATAT+TGG + chr4_3:44307861-44307880 None:intergenic 40.0%
ATCCAAACACAAGCAATACC+AGG + chr4_3:44307869-44307888 None:intergenic 40.0%
CAAAGGTAGGATCAGGATAA+AGG + chr4_3:44308113-44308132 None:intergenic 40.0%
! ATTGGCGGGAAGATGGATTT+GGG + chr4_3:44299312-44299331 None:intergenic 45.0%
! AATTGGCGGGAAGATGGATT+TGG + chr4_3:44299313-44299332 None:intergenic 45.0%
AGATGTAATTGGCGGGAAGA+TGG + chr4_3:44299319-44299338 None:intergenic 45.0%
!! TCCACTCTGAAATGGTGTTG+CGG + chr4_3:44299348-44299367 None:intergenic 45.0%
ACGGAAATGCGAGTAGTGAA+CGG + chr4_3:44299406-44299425 None:intergenic 45.0%
AGACATGAGTTTGTCGAAGG+CGG + chr4_3:44299518-44299537 None:intergenic 45.0%
!!! TGGAGAGGGTTTTTTCTTGG+CGG + chr4_3:44299554-44299573 None:intergenic 45.0%
!!! AGGTGGAGAGGGTTTTTTCT+TGG + chr4_3:44299557-44299576 None:intergenic 45.0%
!!! AGGGTTTTGAACGGTATCTG+GGG + chr4_3:44299632-44299651 None:intergenic 45.0%
! CGGGTTTTTGAACGGTTTCT+AGG + chr4_3:44299672-44299691 None:intergenic 45.0%
! TGATGACGTGTTTCGGATCT+TGG + chr4_3:44299722-44299741 None:intergenic 45.0%
GGGAATAGTCGCTGAATTGA+AGG - chr4_3:44299750-44299769 Msa0642550:three_prime_UTR 45.0%
ATCCGAGTTCGGTTGTTTGT+TGG - chr4_3:44299812-44299831 Msa0642550:three_prime_UTR 45.0%
TCCGAGTTCGGTTGTTTGTT+GGG - chr4_3:44299813-44299832 Msa0642550:three_prime_UTR 45.0%
TCCCAACAAACAACCGAACT+CGG + chr4_3:44299817-44299836 None:intergenic 45.0%
CAGAGAAACAGAAACGGAAC+AGG + chr4_3:44299850-44299869 None:intergenic 45.0%
ATCGTCGAATAGAATTGCGC+CGG - chr4_3:44299990-44300009 Msa0642550:intron 45.0%
GAAGGGTTGGAATTGGGAAT+TGG - chr4_3:44300018-44300037 Msa0642550:intron 45.0%
! GATTATTAAGGCGCTTGCTG+AGG - chr4_3:44300050-44300069 Msa0642550:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr4_3:44300597-44300616 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr4_3:44300598-44300617 None:intergenic 45.0%
! TCAAGCCTTATCCCACTAAG+TGG + chr4_3:44300599-44300618 None:intergenic 45.0%
TGACAGGACAAAGGTGACTT+AGG - chr4_3:44300670-44300689 Msa0642550:intron 45.0%
! GTGTAGCCAAATATCGGCTA+TGG - chr4_3:44300942-44300961 Msa0642550:intron 45.0%
! TAGCCAAATATCGGCTATGG+AGG - chr4_3:44300945-44300964 Msa0642550:intron 45.0%
! TGTGAAGGATAGTGGTGCTA+TGG - chr4_3:44300995-44301014 Msa0642550:intron 45.0%
GGGTGTGTGTATGATTCACA+TGG - chr4_3:44301847-44301866 Msa0642550:intron 45.0%
GCAACGGCATTAATAGTTGG+TGG - chr4_3:44301986-44302005 Msa0642550:intron 45.0%
TAGGTGAATTTAGGGGAGGT+TGG - chr4_3:44302112-44302131 Msa0642550:CDS 45.0%
CAAACTCTCTTAGCTGCCTT+AGG - chr4_3:44302553-44302572 Msa0642550:intron 45.0%
GGTGCATCAGCTCAAAAAGT+TGG - chr4_3:44302703-44302722 Msa0642550:intron 45.0%
AATTGTGTCTGCGCTCCTTA+CGG - chr4_3:44302891-44302910 Msa0642550:intron 45.0%
AGAAATGCTGAACGGAACAC+TGG - chr4_3:44303197-44303216 Msa0642550:intron 45.0%
GAAATGCTGAACGGAACACT+GGG - chr4_3:44303198-44303217 Msa0642550:intron 45.0%
GAAACTGCAGCAACAACATC+AGG + chr4_3:44303230-44303249 None:intergenic 45.0%
AGCGAGAGTTGTTGATCCAT+TGG - chr4_3:44303508-44303527 Msa0642550:intron 45.0%
GGCCAAGTTTATGGTACACA+AGG + chr4_3:44303570-44303589 None:intergenic 45.0%
!! ATTTTGGAGAAACTCGGCAG+TGG - chr4_3:44303983-44304002 Msa0642550:intron 45.0%
AGTCCTTTCGATGTAAAGGG+AGG - chr4_3:44304079-44304098 Msa0642550:intron 45.0%
ACAGAGAATCCTTCCTTTCC+AGG - chr4_3:44304440-44304459 Msa0642550:intron 45.0%
GGCAATGAGATTACCTGGAA+AGG + chr4_3:44304456-44304475 None:intergenic 45.0%
!! GAAGAAGTGCTTGGCCATTA+AGG + chr4_3:44304762-44304781 None:intergenic 45.0%
TAATGGCCAAGCACTTCTTC+AGG - chr4_3:44304762-44304781 Msa0642550:intron 45.0%
!! TAAAAGGCGTTACCTCTCTG+CGG + chr4_3:44304801-44304820 None:intergenic 45.0%
AGTAGATAGGTCAAGGCAGT+TGG - chr4_3:44305009-44305028 Msa0642550:intron 45.0%
AGGTCAAGGCAGTTGGTTAA+AGG - chr4_3:44305016-44305035 Msa0642550:intron 45.0%
ACCTCTTTCGACGAAGAATC+TGG - chr4_3:44305325-44305344 Msa0642550:intron 45.0%
TCCAGATTCTTCGTCGAAAG+AGG + chr4_3:44305329-44305348 None:intergenic 45.0%
TAGAACTTAATAGCTGCCCG+GGG + chr4_3:44305568-44305587 None:intergenic 45.0%
TTTCCAGGAGAGGGTAAAGT+TGG + chr4_3:44305714-44305733 None:intergenic 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + chr4_3:44305729-44305748 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG - chr4_3:44305764-44305783 Msa0642550:intron 45.0%
!! ATGAGTGTCGCTTTAGGCTT+TGG + chr4_3:44305974-44305993 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr4_3:44305984-44306003 Msa0642550:intron 45.0%
TCGGCTCTACTTTGCAGTAT+AGG - chr4_3:44306347-44306366 Msa0642550:intron 45.0%
CGGCTCTACTTTGCAGTATA+GGG - chr4_3:44306348-44306367 Msa0642550:intron 45.0%
GGCTCTACTTTGCAGTATAG+GGG - chr4_3:44306349-44306368 Msa0642550:intron 45.0%
! GTACCTATTGGTGCTTTCCA+CGG - chr4_3:44306386-44306405 Msa0642550:intron 45.0%
ATCTGAATATGGCTAGGCCT+TGG - chr4_3:44306500-44306519 Msa0642550:intron 45.0%
TCTGAATATGGCTAGGCCTT+GGG - chr4_3:44306501-44306520 Msa0642550:intron 45.0%
GTGCTATGACAACGATAACG+AGG - chr4_3:44306622-44306641 Msa0642550:intron 45.0%
!! ATGTTATGGTGGGTAGGAAC+TGG - chr4_3:44306758-44306777 Msa0642550:CDS 45.0%
!! TGGGAATCACTTTAGAGCGA+AGG + chr4_3:44306820-44306839 None:intergenic 45.0%
TCAGAGAGAAACAAGAGCCA+GGG + chr4_3:44306860-44306879 None:intergenic 45.0%
TTCAGAGAGAAACAAGAGCC+AGG + chr4_3:44306861-44306880 None:intergenic 45.0%
CAAGCAGAACTCAGAAATGG+TGG + chr4_3:44306884-44306903 None:intergenic 45.0%
GGGCATAGTAGATTCCAGTA+AGG - chr4_3:44307189-44307208 Msa0642550:intron 45.0%
CTGACCTAGCTTGAAGGTAA+AGG + chr4_3:44307701-44307720 None:intergenic 45.0%
TGTACTCTGACCTAGCTTGA+AGG + chr4_3:44307707-44307726 None:intergenic 45.0%
TGCGCATCAAGCATGTCATT+TGG - chr4_3:44307809-44307828 Msa0642550:CDS 45.0%
TGCCTGGTATTGCTTGTGTT+TGG - chr4_3:44307864-44307883 Msa0642550:CDS 45.0%
! TCTAGAGTTAGCGAACTGTG+CGG - chr4_3:44307956-44307975 Msa0642550:CDS 45.0%
CTCATGGCATCTCGATATGT+TGG - chr4_3:44308086-44308105 Msa0642550:CDS 45.0%
! TTGGCGGGAAGATGGATTTG+GGG + chr4_3:44299311-44299330 None:intergenic 50.0%
GCGGGATAGATGTAATTGGC+GGG + chr4_3:44299326-44299345 None:intergenic 50.0%
GGCGGGATAGATGTAATTGG+CGG + chr4_3:44299327-44299346 None:intergenic 50.0%
TGCGGCGGGATAGATGTAAT+TGG + chr4_3:44299330-44299349 None:intergenic 50.0%
!! ACTCTGAAATGGTGTTGCGG+CGG + chr4_3:44299345-44299364 None:intergenic 50.0%
GAGGGAGTGAGAGAATGGAA+GGG + chr4_3:44299450-44299469 None:intergenic 50.0%
AGAGGGAGTGAGAGAATGGA+AGG + chr4_3:44299451-44299470 None:intergenic 50.0%
!!! GTGGTTTTGACGACATTGCG+CGG + chr4_3:44299489-44299508 None:intergenic 50.0%
ATGAGTTTGTCGAAGGCGGA+GGG + chr4_3:44299514-44299533 None:intergenic 50.0%
GCCTTCGACAAACTCATGTC+TGG - chr4_3:44299517-44299536 Msa0642550:three_prime_UTR 50.0%
GCCAGACATGAGTTTGTCGA+AGG + chr4_3:44299521-44299540 None:intergenic 50.0%
!!! AGAGGGTTTTTTCTTGGCGG+CGG + chr4_3:44299551-44299570 None:intergenic 50.0%
GGAGATGATGAAGGTGGAGA+GGG + chr4_3:44299568-44299587 None:intergenic 50.0%
TGAGTGGCGATGGAGGAATA+GGG + chr4_3:44299606-44299625 None:intergenic 50.0%
TTGAGTGGCGATGGAGGAAT+AGG + chr4_3:44299607-44299626 None:intergenic 50.0%
!!! ACGGTATCTGGGGTTTTGAG+TGG + chr4_3:44299622-44299641 None:intergenic 50.0%
GGTCGGTGGTTCTTCATGAA+CGG + chr4_3:44299701-44299720 None:intergenic 50.0%
GACGTGTTTCGGATCTTGGT+CGG + chr4_3:44299718-44299737 None:intergenic 50.0%
TCCGCAGCTGAAGAAGAAAC+CGG - chr4_3:44299780-44299799 Msa0642550:three_prime_UTR 50.0%
TGTGATACATGCTACACCGG+AGG - chr4_3:44299945-44299964 Msa0642550:CDS 50.0%
TACACCGGAGGATCTTGTTC+CGG - chr4_3:44299957-44299976 Msa0642550:CDS 50.0%
ACAACCGGAACAAGATCCTC+CGG + chr4_3:44299964-44299983 None:intergenic 50.0%
AATTCCAACCCTTCATGCGC+CGG + chr4_3:44300012-44300031 None:intergenic 50.0%
GCGCATGAAGGGTTGGAATT+GGG - chr4_3:44300012-44300031 Msa0642550:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr4_3:44300593-44300612 None:intergenic 50.0%
ACTCACACTCTCTTCCACCA+TGG - chr4_3:44301603-44301622 Msa0642550:intron 50.0%
GGAGGAAGATGAACCTCATC+TGG - chr4_3:44302015-44302034 Msa0642550:intron 50.0%
!!! GGGAGGTGTCTGACGATTTT+AGG - chr4_3:44302093-44302112 Msa0642550:intron 50.0%
CTTCAGTGTACACAGCAGCT+TGG + chr4_3:44302579-44302598 None:intergenic 50.0%
GGAGACTGAATTTCAGGAGG+CGG + chr4_3:44302613-44302632 None:intergenic 50.0%
TTTGAGCTGATGCACCCGAA+AGG + chr4_3:44302699-44302718 None:intergenic 50.0%
GCTCCTTACGGATGGTGTAT+GGG - chr4_3:44302903-44302922 Msa0642550:intron 50.0%
GTTCCCATACACCATCCGTA+AGG + chr4_3:44302909-44302928 None:intergenic 50.0%
TTTACTCCTGGTGTTCCGGT+TGG - chr4_3:44302946-44302965 Msa0642550:intron 50.0%
TTACTCCTGGTGTTCCGGTT+GGG - chr4_3:44302947-44302966 Msa0642550:intron 50.0%
TTTGACAGCATAGGCCCAAC+CGG + chr4_3:44302964-44302983 None:intergenic 50.0%
CAGACTAAAAGAGGGCAGAC+AGG - chr4_3:44303861-44303880 Msa0642550:intron 50.0%
GATCGGAATTCATGCACGTC+TGG - chr4_3:44303912-44303931 Msa0642550:intron 50.0%
TCCATGATAGAGCTGGTCGA+AGG - chr4_3:44304874-44304893 Msa0642550:intron 50.0%
CCATGATAGAGCTGGTCGAA+GGG - chr4_3:44304875-44304894 Msa0642550:intron 50.0%
ACAAAGCTCCCACATACGCA+GGG + chr4_3:44305544-44305563 None:intergenic 50.0%
CTTCCAACTTTACCCTCTCC+TGG - chr4_3:44305708-44305727 Msa0642550:intron 50.0%
! AAGAGGCTGTTTCCAGGAGA+GGG + chr4_3:44305723-44305742 None:intergenic 50.0%
CTGAAGCTTCCGCATATGCA+GGG + chr4_3:44305804-44305823 None:intergenic 50.0%
ACTGAAGCTTCCGCATATGC+AGG + chr4_3:44305805-44305824 None:intergenic 50.0%
GAGAGGGTAAAAAGGCAACC+CGG + chr4_3:44305831-44305850 None:intergenic 50.0%
CCACATATGAACCCTCCAAG+CGG - chr4_3:44306220-44306239 Msa0642550:intron 50.0%
CTCGCGTCAAACCATACATC+AGG + chr4_3:44306976-44306995 None:intergenic 50.0%
TGTATGGTTTGACGCGAGTG+AGG - chr4_3:44306978-44306997 Msa0642550:intron 50.0%
GGTAAACAGGGCTAATGGTC+AGG + chr4_3:44307159-44307178 None:intergenic 50.0%
AGCTCGGTAAACAGGGCTAA+TGG + chr4_3:44307164-44307183 None:intergenic 50.0%
! TTCCGCGTCTAGTTCGAGTT+CGG - chr4_3:44307359-44307378 Msa0642550:intron 50.0%
GTACTTTACCTGCTCAGACG+AGG + chr4_3:44307410-44307429 None:intergenic 50.0%
! TGGCGGGAAGATGGATTTGG+GGG + chr4_3:44299310-44299329 None:intergenic 55.0%
!! CTCTGAAATGGTGTTGCGGC+GGG + chr4_3:44299344-44299363 None:intergenic 55.0%
GCCGCAACACCATTTCAGAG+TGG - chr4_3:44299344-44299363 Msa0642550:three_prime_UTR 55.0%
GGAGAGAGGGAGTGAGAGAA+TGG + chr4_3:44299455-44299474 None:intergenic 55.0%
CATGAGTTTGTCGAAGGCGG+AGG + chr4_3:44299515-44299534 None:intergenic 55.0%
GGGAGATGATGAAGGTGGAG+AGG + chr4_3:44299569-44299588 None:intergenic 55.0%
GAGTGGCGATGGAGGAATAG+GGG + chr4_3:44299605-44299624 None:intergenic 55.0%
!!! TCTGGGGTTTTGAGTGGCGA+TGG + chr4_3:44299616-44299635 None:intergenic 55.0%
GTGTTTCGGATCTTGGTCGG+TGG + chr4_3:44299715-44299734 None:intergenic 55.0%
! GCCGGTTTCTTCTTCAGCTG+CGG + chr4_3:44299784-44299803 None:intergenic 55.0%
GAACTCGGATCGAAACTCGC+CGG + chr4_3:44299802-44299821 None:intergenic 55.0%
GGCGAGTTTCGATCCGAGTT+CGG - chr4_3:44299801-44299820 Msa0642550:three_prime_UTR 55.0%
GGCGCATGAAGGGTTGGAAT+TGG - chr4_3:44300011-44300030 Msa0642550:intron 55.0%
CGAAGGCGACATCATCACCT+CGG + chr4_3:44300274-44300293 None:intergenic 55.0%
ACTAAGTGGGGTCGGCAACA+TGG + chr4_3:44300585-44300604 None:intergenic 55.0%
ATGTTGCCGACCCCACTTAG+TGG - chr4_3:44300584-44300603 Msa0642550:intron 55.0%
TGTTGCCGACCCCACTTAGT+GGG - chr4_3:44300585-44300604 Msa0642550:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr4_3:44300591-44300610 Msa0642550:intron 55.0%
! CTAGACGGCTCTGACAACAG+GGG + chr4_3:44301560-44301579 None:intergenic 55.0%
! CCTAGACGGCTCTGACAACA+GGG + chr4_3:44301561-44301580 None:intergenic 55.0%
! ACCTAGACGGCTCTGACAAC+AGG + chr4_3:44301562-44301581 None:intergenic 55.0%
GTACACAGCAGCTTGGCCTA+AGG + chr4_3:44302572-44302591 None:intergenic 55.0%
CGGTTAGCGGCTGATGAGAT+AGG - chr4_3:44302729-44302748 Msa0642550:CDS 55.0%
CGCTCCTTACGGATGGTGTA+TGG - chr4_3:44302902-44302921 Msa0642550:intron 55.0%
! ATACGATGGAGAGCGTGCTC+AGG - chr4_3:44303050-44303069 Msa0642550:intron 55.0%
CGTGCTCAGGTGATGCTTCA+TGG - chr4_3:44303063-44303082 Msa0642550:intron 55.0%
GGACCGGCAATGAGATTACC+TGG + chr4_3:44304461-44304480 None:intergenic 55.0%
CCCTTCGACCAGCTCTATCA+TGG + chr4_3:44304878-44304897 None:intergenic 55.0%
TGATAGAGCTGGTCGAAGGG+TGG - chr4_3:44304878-44304897 Msa0642550:intron 55.0%
! TATATGGTGGGACCCCTTCC+TGG - chr4_3:44305517-44305536 Msa0642550:intron 55.0%
! ATATGGTGGGACCCCTTCCT+GGG - chr4_3:44305518-44305537 Msa0642550:intron 55.0%
CACAAAGCTCCCACATACGC+AGG + chr4_3:44305545-44305564 None:intergenic 55.0%
! TATGTGGGAGCTTTGTGCCC+CGG - chr4_3:44305548-44305567 Msa0642550:intron 55.0%
! CAAGAGGCTGTTTCCAGGAG+AGG + chr4_3:44305724-44305743 None:intergenic 55.0%
ATGCGGAAGCTTCAGTGCAC+CGG - chr4_3:44305809-44305828 Msa0642550:intron 55.0%
CCGCTTGGAGGGTTCATATG+TGG + chr4_3:44306223-44306242 None:intergenic 55.0%
CAGTTGAGTGACCGCTTGGA+GGG + chr4_3:44306234-44306253 None:intergenic 55.0%
!! CGACCGTGGAAAGCACCAAT+AGG + chr4_3:44306392-44306411 None:intergenic 55.0%
! ATTGGTGCTTTCCACGGTCG+TGG - chr4_3:44306392-44306411 Msa0642550:intron 55.0%
! TTGGTGCTTTCCACGGTCGT+GGG - chr4_3:44306393-44306412 Msa0642550:intron 55.0%
GGAGCAGGGACCTTAGGTTT+GGG + chr4_3:44306839-44306858 None:intergenic 55.0%
GAAACAAGAGCCAGGGAGCA+GGG + chr4_3:44306853-44306872 None:intergenic 55.0%
AGAAACAAGAGCCAGGGAGC+AGG + chr4_3:44306854-44306873 None:intergenic 55.0%
CCACTGCAGCTCGGTAAACA+GGG + chr4_3:44307171-44307190 None:intergenic 55.0%
CCTGTTTACCGAGCTGCAGT+GGG - chr4_3:44307169-44307188 Msa0642550:intron 55.0%
CTACTATGCCCACTGCAGCT+CGG + chr4_3:44307180-44307199 None:intergenic 55.0%
CTTTACCTGCTCAGACGAGG+AGG + chr4_3:44307407-44307426 None:intergenic 55.0%
CAGAAGGGACCCAATATGCC+TGG - chr4_3:44307848-44307867 Msa0642550:CDS 55.0%
AGAGTTAGCGAACTGTGCGG+CGG - chr4_3:44307959-44307978 Msa0642550:CDS 55.0%
TTTGACGACATTGCGCGGCG+AGG + chr4_3:44299484-44299503 None:intergenic 60.0%
AGTTTGTCGAAGGCGGAGGG+TGG + chr4_3:44299511-44299530 None:intergenic 60.0%
!!! GGGGTTTTGAGTGGCGATGG+AGG + chr4_3:44299613-44299632 None:intergenic 60.0%
! AGAATTGCGCCGGCGCATGA+AGG - chr4_3:44300000-44300019 Msa0642550:intron 60.0%
! GAATTGCGCCGGCGCATGAA+GGG - chr4_3:44300001-44300020 Msa0642550:intron 60.0%
CCCTGTTGTCAGAGCCGTCT+AGG - chr4_3:44301558-44301577 Msa0642550:intron 60.0%
GTGTCTGCGCTCCTTACGGA+TGG - chr4_3:44302895-44302914 Msa0642550:intron 60.0%
ATAGGCCCAACCGGAACACC+AGG + chr4_3:44302955-44302974 None:intergenic 60.0%
ACATACGCAGGGCCCAGGAA+GGG + chr4_3:44305533-44305552 None:intergenic 60.0%
TTCCTGGGCCCTGCGTATGT+GGG - chr4_3:44305533-44305552 Msa0642550:intron 60.0%
! ATGTGGGAGCTTTGTGCCCC+GGG - chr4_3:44305549-44305568 Msa0642550:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr4_3:44305777-44305796 Msa0642550:intron 60.0%
CATATGCAGGGTCCGGGAAG+GGG + chr4_3:44305792-44305811 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG + chr4_3:44305793-44305812 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG - chr4_3:44305792-44305811 Msa0642550:intron 60.0%
CTTCCGCATATGCAGGGTCC+GGG + chr4_3:44305798-44305817 None:intergenic 60.0%
GCTTCCGCATATGCAGGGTC+CGG + chr4_3:44305799-44305818 None:intergenic 60.0%
TGCGGAAGCTTCAGTGCACC+GGG - chr4_3:44305810-44305829 Msa0642550:intron 60.0%
CCAGTTGAGTGACCGCTTGG+AGG + chr4_3:44306235-44306254 None:intergenic 60.0%
CCTCCAAGCGGTCACTCAAC+TGG - chr4_3:44306232-44306251 Msa0642550:intron 60.0%
CAGCCAGTTGAGTGACCGCT+TGG + chr4_3:44306238-44306257 None:intergenic 60.0%
CTGTACGTTTCCCACGACCG+TGG + chr4_3:44306406-44306425 None:intergenic 60.0%
CACGGTCGTGGGAAACGTAC+AGG - chr4_3:44306404-44306423 Msa0642550:intron 60.0%
GGGAGCAGGGACCTTAGGTT+TGG + chr4_3:44306840-44306859 None:intergenic 60.0%
AACCTAAGGTCCCTGCTCCC+TGG - chr4_3:44306840-44306859 Msa0642550:intron 60.0%
CCCTGTTTACCGAGCTGCAG+TGG - chr4_3:44307168-44307187 Msa0642550:intron 60.0%
CCCACTGCAGCTCGGTAAAC+AGG + chr4_3:44307172-44307191 None:intergenic 60.0%
GGCCGAACTCGAACTAGACG+CGG + chr4_3:44307364-44307383 None:intergenic 60.0%
GCCTGACAAAGCTCCTGAGC+AGG - chr4_3:44307381-44307400 Msa0642550:intron 60.0%
! GCCTGCTCAGGAGCTTTGTC+AGG + chr4_3:44307385-44307404 None:intergenic 60.0%
GGCGAGGAGTGGAGGAGAGA+GGG + chr4_3:44299468-44299487 None:intergenic 65.0%
TTGTCGAAGGCGGAGGGTGG+TGG + chr4_3:44299508-44299527 None:intergenic 65.0%
! AAGGCGCTTGCTGAGGCGTG+TGG - chr4_3:44300057-44300076 Msa0642550:intron 65.0%
! CGCTTGCTGAGGCGTGTGGA+AGG - chr4_3:44300061-44300080 Msa0642550:intron 65.0%
! GACGGCTCTGACAACAGGGG+AGG + chr4_3:44301557-44301576 None:intergenic 65.0%
CATACGCAGGGCCCAGGAAG+GGG + chr4_3:44305532-44305551 None:intergenic 65.0%
CACATACGCAGGGCCCAGGA+AGG + chr4_3:44305534-44305553 None:intergenic 65.0%
CTTCCTGGGCCCTGCGTATG+TGG - chr4_3:44305532-44305551 Msa0642550:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG + chr4_3:44305779-44305798 None:intergenic 65.0%
CGCATATGCAGGGTCCGGGA+AGG + chr4_3:44305794-44305813 None:intergenic 65.0%
AGCCAGGGAGCAGGGACCTT+AGG + chr4_3:44306845-44306864 None:intergenic 65.0%
TCAGACGAGGAGGCCTGCTC+AGG + chr4_3:44307397-44307416 None:intergenic 65.0%
CGGCGAGGAGTGGAGGAGAG+AGG + chr4_3:44299469-44299488 None:intergenic 70.0%
CATTGCGCGGCGAGGAGTGG+AGG + chr4_3:44299476-44299495 None:intergenic 70.0%
CGACATTGCGCGGCGAGGAG+TGG + chr4_3:44299479-44299498 None:intergenic 70.0%
! TGCGCCGGCGCATGAAGGGT+TGG - chr4_3:44300005-44300024 Msa0642550:intron 70.0%
CTCCCACATACGCAGGGCCC+AGG + chr4_3:44305538-44305557 None:intergenic 70.0%
GCAGGCCTCCTCGTCTGAGC+AGG - chr4_3:44307399-44307418 Msa0642550:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 44299289 44308238 44299289 ID=Msa0642550;Name=Msa0642550
chr4_3 mRNA 44299289 44308238 44299289 ID=Msa0642550-mRNA-1;Parent=Msa0642550;Name=Msa0642550-mRNA-1;_AED=0.20;_eAED=0.20;_QI=78|1|1|1|0.94|0.88|18|597|777
chr4_3 exon 44299289 44299860 44299289 ID=Msa0642550-mRNA-1:exon:10182;Parent=Msa0642550-mRNA-1
chr4_3 exon 44299896 44299989 44299896 ID=Msa0642550-mRNA-1:exon:10181;Parent=Msa0642550-mRNA-1
chr4_3 exon 44300107 44300184 44300107 ID=Msa0642550-mRNA-1:exon:10180;Parent=Msa0642550-mRNA-1
chr4_3 exon 44300317 44300394 44300317 ID=Msa0642550-mRNA-1:exon:10179;Parent=Msa0642550-mRNA-1
chr4_3 exon 44300528 44300584 44300528 ID=Msa0642550-mRNA-1:exon:10178;Parent=Msa0642550-mRNA-1
chr4_3 exon 44300680 44300753 44300680 ID=Msa0642550-mRNA-1:exon:10177;Parent=Msa0642550-mRNA-1
chr4_3 exon 44300859 44300930 44300859 ID=Msa0642550-mRNA-1:exon:10176;Parent=Msa0642550-mRNA-1
chr4_3 exon 44301102 44301163 44301102 ID=Msa0642550-mRNA-1:exon:10175;Parent=Msa0642550-mRNA-1
chr4_3 exon 44301244 44301345 44301244 ID=Msa0642550-mRNA-1:exon:10174;Parent=Msa0642550-mRNA-1
chr4_3 exon 44302099 44302211 44302099 ID=Msa0642550-mRNA-1:exon:10173;Parent=Msa0642550-mRNA-1
chr4_3 exon 44302720 44302851 44302720 ID=Msa0642550-mRNA-1:exon:10172;Parent=Msa0642550-mRNA-1
chr4_3 exon 44303066 44303153 44303066 ID=Msa0642550-mRNA-1:exon:10171;Parent=Msa0642550-mRNA-1
chr4_3 exon 44304275 44304369 44304275 ID=Msa0642550-mRNA-1:exon:10170;Parent=Msa0642550-mRNA-1
chr4_3 exon 44304456 44304686 44304456 ID=Msa0642550-mRNA-1:exon:10169;Parent=Msa0642550-mRNA-1
chr4_3 exon 44304885 44305001 44304885 ID=Msa0642550-mRNA-1:exon:10168;Parent=Msa0642550-mRNA-1
chr4_3 exon 44305077 44305178 44305077 ID=Msa0642550-mRNA-1:exon:10167;Parent=Msa0642550-mRNA-1
chr4_3 exon 44306735 44306851 44306735 ID=Msa0642550-mRNA-1:exon:10166;Parent=Msa0642550-mRNA-1
chr4_3 exon 44307414 44308238 44307414 ID=Msa0642550-mRNA-1:exon:10165;Parent=Msa0642550-mRNA-1
chr4_3 five_prime_UTR 44308161 44308238 44308161 ID=Msa0642550-mRNA-1:five_prime_utr;Parent=Msa0642550-mRNA-1
chr4_3 CDS 44307414 44308160 44307414 ID=Msa0642550-mRNA-1:cds;Parent=Msa0642550-mRNA-1
chr4_3 CDS 44306735 44306851 44306735 ID=Msa0642550-mRNA-1:cds;Parent=Msa0642550-mRNA-1
chr4_3 CDS 44305077 44305178 44305077 ID=Msa0642550-mRNA-1:cds;Parent=Msa0642550-mRNA-1
chr4_3 CDS 44304885 44305001 44304885 ID=Msa0642550-mRNA-1:cds;Parent=Msa0642550-mRNA-1
chr4_3 CDS 44304456 44304686 44304456 ID=Msa0642550-mRNA-1:cds;Parent=Msa0642550-mRNA-1
chr4_3 CDS 44304275 44304369 44304275 ID=Msa0642550-mRNA-1:cds;Parent=Msa0642550-mRNA-1
chr4_3 CDS 44303066 44303153 44303066 ID=Msa0642550-mRNA-1:cds;Parent=Msa0642550-mRNA-1
chr4_3 CDS 44302720 44302851 44302720 ID=Msa0642550-mRNA-1:cds;Parent=Msa0642550-mRNA-1
chr4_3 CDS 44302099 44302211 44302099 ID=Msa0642550-mRNA-1:cds;Parent=Msa0642550-mRNA-1
chr4_3 CDS 44301244 44301345 44301244 ID=Msa0642550-mRNA-1:cds;Parent=Msa0642550-mRNA-1
chr4_3 CDS 44301102 44301163 44301102 ID=Msa0642550-mRNA-1:cds;Parent=Msa0642550-mRNA-1
chr4_3 CDS 44300859 44300930 44300859 ID=Msa0642550-mRNA-1:cds;Parent=Msa0642550-mRNA-1
chr4_3 CDS 44300680 44300753 44300680 ID=Msa0642550-mRNA-1:cds;Parent=Msa0642550-mRNA-1
chr4_3 CDS 44300528 44300584 44300528 ID=Msa0642550-mRNA-1:cds;Parent=Msa0642550-mRNA-1
chr4_3 CDS 44300317 44300394 44300317 ID=Msa0642550-mRNA-1:cds;Parent=Msa0642550-mRNA-1
chr4_3 CDS 44300107 44300184 44300107 ID=Msa0642550-mRNA-1:cds;Parent=Msa0642550-mRNA-1
chr4_3 CDS 44299921 44299989 44299921 ID=Msa0642550-mRNA-1:cds;Parent=Msa0642550-mRNA-1
chr4_3 three_prime_UTR 44299896 44299920 44299896 ID=Msa0642550-mRNA-1:three_prime_utr;Parent=Msa0642550-mRNA-1
chr4_3 three_prime_UTR 44299289 44299860 44299289 ID=Msa0642550-mRNA-1:three_prime_utr;Parent=Msa0642550-mRNA-1
Gene Sequence

>Msa0642550

ATGTTAGCATTGCATTTCAAATCGTGTTTCTCTCTTCCGTTCACTACTCGCATTTCCGTCAAATTTTCTTCGTCACTCTTCCCTTCCATTCTCTCACTCCCTCTCTCCTCCACTCCTCGCCGCGCAATGTCGTCAAAACCACCACCCTCCGCCTTCGACAAACTCATGTCTGGCGCACGCGCCGCCGCCAAGAAAAAACCCTCTCCACCTTCATCATCTCCCAAAAAACGAAAATCCCCTATTCCTCCATCGCCACTCAAAACCCCAGATACCGTTCAAAACCCTAACAACAACCTTAAAACCCTAGAAACCGTTCAAAAACCCGAAGAAACCGTTCATGAAGAACCACCGACCAAGATCCGAAACACGTCATCATCTTCGAAGGGAATAGTCGCTGAATTGAAGGAAAAGGTTCCGCAGCTGAAGAAGAAACCGGCGAGTTTCGATCCGAGTTCGGTTGTTTGTTGGGAAAAAGACAAACCTGTTCCGTTTCTGTTTCTCTGTTTGGCGTTTGATATGATTAACGAAGAGAGTGGTAGAATTGTGATCACTGACATTGTGTGTAATTTGTTGAGAACTGTGATACATGCTACACCGGAGGATCTTGTTCCGGTTGTTTATTTATCGTCGAATAGAATTGCGCCGGCGCATGAAGGGTTGGAATTGGGAATTGGTGATGCTTCGATTATTAAGGCGCTTGCTGAGGCGTGTGGAAGGACTGAGCAACAGATTAAGATTCAGTATAAGGACAAAGGTGACTTAGGCTTAGTTGCGAAAGCTAGCCGTTCTTCTCAGTCTATGATGCGGAAGCCTGATGCTTTGACTATTAGGAAGGTTTTCAAAACATTTCATCTAATTGCAAAGGAATCTGGAAAAGACAGTCAAGAGAAGAAAAAGAACCACATAAAGTCACTTCTTGTTGCTGCAACTGACTGTGAACCTCTATATATAATCCGTTTGCTACAGACAAAATTGCGAATTGGATATGCAGAGCAAACTCTCTTAGCTGCCTTAGGCCAAGCTGCTGTGTACACTGAAGAACATTCTAAACCGCCTCCTGAAATTCAGTCTCCTTTTGAAGAGGCTGCTAAAATTGTTAAAAAAGTCTATTCTGTTCTTCCTGATTATGACAAAATTGTGTCTGCGCTCCTTACGGATGGTGTATGGGAACTTCCAAAGAAGTGTGATTTTACTCCTGGTGTTCCGGTTGGGCCTATGCTGTCAAAAGCAACCAAGGGTGTATCTGAAATTTTAAATAAGTTTCAGGATGTAGAGTTTACGTGTGAATACAAATACGATGGAGAGCGTGCTCAGATACATTTCTTGGAGAATGGCTCAGTAGAGATTTACAGTAGAAATGCTGAACGGAACACTGGGAAGTTTCCTGATGTTGTTGCTGCAGTTTCAAGGTTAAAGAAATCATCTGTAACATCATTTATCCTTGATTGTGAACTTGTTGCATATGATCGTACAAAACAGAGAATCCTTCCTTTCCAGGTGCTTAGTACTCGTGCCCGCAAAAATGTAGCTTTGAGTGACATAAAGGTTGATGTTTGTGTCTTTGCTTTTGATTTGTTGTACCTTAATGGCCAAGCACTTCTTCAGGAAAACTTGAAAATCCGCAGAGAGCATCTCTATACCTCTTTCGACGAAGAATCTGGATTCTTTCAGTTTGCAACATCAACAACATCAAATGATGTTGAGGAGATACAAAAATTTCTTGACAAAGCCATTGATGCAAGTTGTGAGGGATTAATTATTAAAACATTACATGAAGACGCCACATATGAACCCTCCAAGCGGTCACTCAACTGGCTGAAACTGAAGAAAGATTATATGGAAAATATAGGGGACTCACTAGATTTGGTACCTATTGGTGCTTTCCACGGTCGTGGGAAACGTACAGGAGTGTATGGTGCTTTTCTACTTGCGTGCTATGACAACGATAACGAGGAGTTTCAAAGCATTTGTAAGATAGGAACTGGATTCAAAGAAGAAGTGCTTGAAGAACGTTCTACTAGCCTTCGCTCTAAAGTGATTCCCAAACCTAAGACATACTATAAATGTGGAGAATCAATCAATCCTGATGTATGGTTTGACGCGAGTGAGGTGTGGGAGGTGAAAGCTGCAGACCTGACCATTAGCCCTGTTTACCGAGCTGCAGTGGGCATAGTAGATTCCAGTAAGGGTATATCTCTTCGATTTCCGCGTCTAGTTCGAGTTCGGCCTGACAAAGCTCCTGAGCAGGCCTCCTCGTCTGAGCAGGTTGCTGAAATGTATAATGCTCAAAAACACAATCACAATGACAAACAGGATGACAATGAAGATGATTGA
Protein sequence

>Msa0642550

MLALHFKSCFSLPFTTRISVKFSSSLFPSILSLPLSSTPRRAMSSKPPPSAFDKLMSGARAAAKKKPSPPSSSPKKRKSPIPPSPLKTPDTVQNPNNNLKTLETVQKPEETVHEEPPTKIRNTSSSSKGIVAELKEKVPQLKKKPASFDPSSVVCWEKDKPVPFLFLCLAFDMINEESGRIVITDIVCNLLRTVIHATPEDLVPVVYLSSNRIAPAHEGLELGIGDASIIKALAEACGRTEQQIKIQYKDKGDLGLVAKASRSSQSMMRKPDALTIRKVFKTFHLIAKESGKDSQEKKKNHIKSLLVAATDCEPLYIIRLLQTKLRIGYAEQTLLAALGQAAVYTEEHSKPPPEIQSPFEEAAKIVKKVYSVLPDYDKIVSALLTDGVWELPKKCDFTPGVPVGPMLSKATKGVSEILNKFQDVEFTCEYKYDGERAQIHFLENGSVEIYSRNAERNTGKFPDVVAAVSRLKKSSVTSFILDCELVAYDRTKQRILPFQVLSTRARKNVALSDIKVDVCVFAFDLLYLNGQALLQENLKIRREHLYTSFDEESGFFQFATSTTSNDVEEIQKFLDKAIDASCEGLIIKTLHEDATYEPSKRSLNWLKLKKDYMENIGDSLDLVPIGAFHGRGKRTGVYGAFLLACYDNDNEEFQSICKIGTGFKEEVLEERSTSLRSKVIPKPKTYYKCGESINPDVWFDASEVWEVKAADLTISPVYRAAVGIVDSSKGISLRFPRLVRVRPDKAPEQASSSEQVAEMYNAQKHNHNDKQDDNEDD*