AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0999050

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0999050 MtrunA17_Chr6g0485101 91.329 715 45 3 1 715 1 698 0.0 1309
Msa0999050 MtrunA17_Chr8g0390701 56.952 748 229 17 1 715 1 688 0.0 744
Msa0999050 MtrunA17_Chr6g0460621 50.420 238 101 5 16 239 15 249 2.90e-66 231
Msa0999050 MtrunA17_Chr1g0148531 30.659 349 135 10 66 344 1 312 1.63e-28 119
Msa0999050 MtrunA17_Chr8g0360731 28.000 150 89 4 10 147 14 156 6.81e-17 84.0
Msa0999050 MtrunA17_Chr2g0318391 26.994 163 109 3 8 167 12 167 2.83e-15 79.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0999050 AT4G13350.1 48.199 583 220 12 1 569 1 515 1.22e-152 456
Msa0999050 AT4G13350.2 48.199 583 220 12 1 569 1 515 1.22e-152 456
Msa0999050 AT4G32630.2 32.617 745 349 30 5 714 1 627 8.18e-82 273
Msa0999050 AT4G32630.6 32.527 744 350 30 5 714 1 626 1.91e-81 271
Msa0999050 AT4G32630.4 32.527 744 350 30 5 714 1 626 1.91e-81 271
Msa0999050 AT4G32630.5 32.527 744 350 30 5 714 1 626 1.91e-81 271
Msa0999050 AT4G32630.3 32.527 744 350 30 5 714 1 626 1.91e-81 271
Msa0999050 AT4G32630.1 32.527 744 350 30 5 714 1 626 1.91e-81 271
Msa0999050 AT1G08680.3 60.000 170 66 2 1 169 2 170 5.20e-65 227
Msa0999050 AT1G08680.5 60.000 170 66 2 1 169 2 170 7.42e-65 226
Msa0999050 AT1G08680.4 45.098 306 147 9 1 298 2 294 8.30e-65 227
Msa0999050 AT1G08680.2 45.098 306 147 9 1 298 2 294 8.78e-65 227
Msa0999050 AT1G08680.1 45.098 306 147 9 1 298 2 294 9.22e-65 227
Msa0999050 AT5G54310.1 28.221 163 102 7 10 167 14 166 5.55e-13 72.4
Msa0999050 AT4G21160.2 31.452 124 63 5 12 122 15 129 2.28e-11 66.2
Msa0999050 AT4G21160.3 31.452 124 63 5 12 122 15 129 2.28e-11 66.2
Msa0999050 AT4G21160.1 31.452 124 63 5 12 122 15 129 2.28e-11 66.2
Msa0999050 AT4G21160.4 31.452 124 63 5 12 122 15 129 2.28e-11 66.2

Find 295 sgRNAs with CRISPR-Local

Find 584 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGACCTGTTAGAGATATTT+TGG 0.113010 6_4:-80713042 Msa0999050:CDS
CTCTACTTGGCTTTCGTTAC+TGG 0.146357 6_4:+80712232 None:intergenic
TTCTGAGTTGTGCTCTTTCA+TGG 0.212280 6_4:-80709393 Msa0999050:three_prime_UTR
CAGGAGAGTTGAGGCATATC+AGG 0.233416 6_4:-80713318 Msa0999050:CDS
AATATGTGTGCACAAATTTC+TGG 0.267779 6_4:-80714491 Msa0999050:CDS
GGAGTGGTTCCCGGCCTATC+AGG 0.277885 6_4:+80709839 None:intergenic
CCAGCAGCAGCTCCTAGTTT+TGG 0.290873 6_4:-80711865 Msa0999050:CDS
CTCTGGCTTGGAGGGTGCAT+TGG 0.292668 6_4:+80710607 None:intergenic
TACTTTCCTGCTCCAGTTCA+AGG 0.301141 6_4:-80711291 Msa0999050:CDS
CCACCCCTGCCATCCTTTCA+AGG 0.302420 6_4:-80710496 Msa0999050:CDS
CCGAATGGATTCCCTCCTTT+GGG 0.307754 6_4:+80709800 None:intergenic
TTAGAGCTGGGAGTGGTTCC+CGG 0.312806 6_4:+80709830 None:intergenic
GGTTAGAAATGTTGAAGTTC+TGG 0.319675 6_4:+80717994 None:intergenic
CTATCAGGCAGCTGCTGATT+TGG 0.325530 6_4:+80709854 None:intergenic
TTGAAGTTCTGGAAGGTTCT+TGG 0.333531 6_4:+80718005 None:intergenic
GAGAAAATGTAATACCTCTT+AGG 0.336552 6_4:-80713019 Msa0999050:CDS
CCCGAATGGATTCCCTCCTT+TGG 0.337927 6_4:+80709799 None:intergenic
AGGCAAGGAGTTGGGAATTT+CGG 0.339840 6_4:-80709908 Msa0999050:CDS
TTGAATTTGATTATGATGAT+TGG 0.347818 6_4:-80717767 Msa0999050:five_prime_UTR
AGTATCAGATGGAGATTATA+AGG 0.353912 6_4:-80713123 Msa0999050:CDS
TCTCCCAAAATATCTCTAAC+AGG 0.355400 6_4:+80713038 None:intergenic
TTGGTGCCAGTAATGTTAAC+AGG 0.360040 6_4:-80713611 Msa0999050:intron
ACTGTTGGAGCAACAGGTTC+AGG 0.363404 6_4:+80712164 None:intergenic
GGATTTGTGATGACCGGCTC+TGG 0.363823 6_4:-80709645 Msa0999050:three_prime_UTR
GCCCAGGTCTCTAGCTCGTT+CGG 0.369926 6_4:+80713085 None:intergenic
TTTGGGGAAGGGGTTAGAGC+TGG 0.369937 6_4:+80709817 None:intergenic
TGAGGAACTGTTGGAGCAAC+AGG 0.372048 6_4:+80712158 None:intergenic
CTGCCTAATGTACCACCTTC+AGG 0.373574 6_4:-80710469 Msa0999050:CDS
GGATTTCCTGACTGCAAAAC+AGG 0.377480 6_4:+80712110 None:intergenic
TGAAGTTCTGGAAGGTTCTT+GGG 0.383875 6_4:+80718006 None:intergenic
GAAATCCCAGTGATGACAAT+TGG 0.385158 6_4:-80712094 Msa0999050:CDS
CTAGGAGCTGCTGCTGGAAT+AGG 0.389666 6_4:+80711871 None:intergenic
TCTGGCTTGGAGGGTGCATT+GGG 0.389848 6_4:+80710608 None:intergenic
GGGAGTGATGGTGGTACATT+AGG 0.391076 6_4:+80710628 None:intergenic
CAAATCAGCAGCTGCCTGAT+AGG 0.391546 6_4:-80709853 Msa0999050:CDS
AAGATTCCGACACGGACAAT+TGG 0.392823 6_4:+80711994 None:intergenic
CCCATTTGCCAACCTTGAAC+TGG 0.394548 6_4:+80711279 None:intergenic
GTTTGTTAAGCATGTTTATG+AGG 0.401277 6_4:-80713580 Msa0999050:CDS
ATGTATTAACTGTAATAGTT+TGG 0.402848 6_4:-80717613 Msa0999050:intron
GATCAAGAAAGTAGGCAATA+TGG 0.406628 6_4:-80713209 Msa0999050:CDS
CATTGTCCTACATTATTATG+AGG 0.408827 6_4:+80711793 None:intergenic
AACCGTGCAGTCTTCAACCC+TGG 0.409273 6_4:-80710542 Msa0999050:CDS
ATGATGATTGGAATCGCGTT+TGG 0.410972 6_4:-80717755 Msa0999050:five_prime_UTR
CCTTCCATGTCTTCCTTGCA+CGG 0.412348 6_4:-80710658 Msa0999050:CDS
AGATAGAGAGATTGAATGAA+GGG 0.413186 6_4:-80709520 Msa0999050:three_prime_UTR
GATCGGCATCAAAATCAATA+AGG 0.413195 6_4:+80712186 None:intergenic
TTGAGGCACACTAGATTGTT+GGG 0.413764 6_4:+80712133 None:intergenic
TGTAAACTGTTTATTCCTAT+AGG 0.414631 6_4:-80709597 Msa0999050:three_prime_UTR
ATACACTTGGGGCTTGATGT+GGG 0.416574 6_4:+80710921 None:intergenic
CCCAGGTCTCTAGCTCGTTC+GGG 0.418011 6_4:+80713086 None:intergenic
CCAAAGGAGGGAATCCATTC+GGG 0.420807 6_4:-80709799 Msa0999050:CDS
GTACAAACACATGTAAGTTT+CGG 0.424020 6_4:-80709709 Msa0999050:three_prime_UTR
TGTGTATCACCTTGGACTCC+TGG 0.424442 6_4:+80711957 None:intergenic
CCAGTTCAAGGTTGGCAAAT+GGG 0.424788 6_4:-80711279 Msa0999050:CDS
GGATTCCCTCCTTTGGGGAA+GGG 0.425243 6_4:+80709806 None:intergenic
GACACACAGGAACGTCGTTA+TGG 0.426530 6_4:-80713269 Msa0999050:CDS
GTCCTCCAGTTGTCAATGAT+TGG 0.426864 6_4:-80713163 Msa0999050:CDS
GCAAGTACTTACCTGCTGTC+AGG 0.428298 6_4:+80713692 None:intergenic
GTTGAGGCACACTAGATTGT+TGG 0.430065 6_4:+80712132 None:intergenic
ATGCCTGAAGGTGGTACATT+AGG 0.431901 6_4:+80710466 None:intergenic
CAATATACTATCTTCGATAA+GGG 0.431965 6_4:-80709565 Msa0999050:three_prime_UTR
CCCAAAGGAGGGAATCCATT+CGG 0.433525 6_4:-80709800 Msa0999050:CDS
TTGGCAAATGGGTCCTCCGC+AGG 0.434161 6_4:-80711268 Msa0999050:CDS
CTGTTAAAAGCCTCATTAGC+AGG 0.435777 6_4:+80711496 None:intergenic
TTGGGGAAGGGGTTAGAGCT+GGG 0.436834 6_4:+80709818 None:intergenic
GATTCCCTCCTTTGGGGAAG+GGG 0.439278 6_4:+80709807 None:intergenic
TAGATAGAGAGATTGAATGA+AGG 0.439631 6_4:-80709521 Msa0999050:three_prime_UTR
GGAACTGAGGGAAACATGTT+CGG 0.441681 6_4:-80709887 Msa0999050:CDS
GTTTCGGTTTCTATTGTTTG+TGG 0.443066 6_4:-80709693 Msa0999050:three_prime_UTR
ACAATATACTATCTTCGATA+AGG 0.446065 6_4:-80709566 Msa0999050:three_prime_UTR
AAGACGATTCCTATGAAAAC+AGG 0.449938 6_4:-80713337 Msa0999050:CDS
AGAAGCCCAATTGTCATCAC+TGG 0.452119 6_4:+80712088 None:intergenic
GGAGGGTGCATTGGGAGTGA+TGG 0.452418 6_4:+80710616 None:intergenic
GCATGTGGCATTGGTGCATT+CGG 0.453125 6_4:+80711538 None:intergenic
GTAATACCTCTTAGGATAAG+TGG 0.454550 6_4:-80713011 Msa0999050:CDS
GGAAGTTCTGTTCTTCCACT+TGG 0.456507 6_4:+80711439 None:intergenic
TGACGATGGGGTTGGAGTCC+AGG 0.457193 6_4:+80710408 None:intergenic
TGCAATGAACTGCTCTGGCT+TGG 0.457749 6_4:+80710595 None:intergenic
TATGAGGATAGGAGATTCAC+TGG 0.458069 6_4:-80713564 Msa0999050:CDS
TCCAGTTCAAGGTTGGCAAA+TGG 0.459544 6_4:-80711280 Msa0999050:CDS
CTACTTTCTTGATCAGATCC+AGG 0.460798 6_4:+80713218 None:intergenic
AATGAACTGCTCTGGCTTGG+AGG 0.462667 6_4:+80710598 None:intergenic
ATAGGAGATTCACTGGAGAT+AGG 0.463488 6_4:-80713557 Msa0999050:CDS
TGCCAACCTTGAACTGGAGC+AGG 0.464842 6_4:+80711285 None:intergenic
GGATTTAAATTTGAGGTGCT+TGG 0.465186 6_4:+80712035 None:intergenic
TGGATTCCCTCCTTTGGGGA+AGG 0.465352 6_4:+80709805 None:intergenic
TCATAATAATGTAGGACAAT+GGG 0.466865 6_4:-80711791 Msa0999050:CDS
CAATGTGCAGGCAAGGAGTT+GGG 0.467253 6_4:-80709916 Msa0999050:intron
GTTGGAGTCCAGGCATGGGA+TGG 0.467652 6_4:+80710418 None:intergenic
CGACGCCAATCATTGACAAC+TGG 0.467673 6_4:+80713158 None:intergenic
AAGAAAGAAAGAGAGAGAAA+CGG 0.467763 6_4:+80718078 None:intergenic
CATACACTTGGGGCTTGATG+TGG 0.469503 6_4:+80710920 None:intergenic
TAGGCAATCCATCCCATGCC+TGG 0.469752 6_4:-80710426 Msa0999050:CDS
CAGTTAATACATCTCCGATT+CGG 0.471218 6_4:+80717624 None:intergenic
TCAGCAGCTGCCTGATAGGC+CGG 0.471517 6_4:-80709849 Msa0999050:CDS
AGATTCCGACACGGACAATT+GGG 0.472985 6_4:+80711995 None:intergenic
CGGTTTCTATTGTTTGTGGA+TGG 0.479058 6_4:-80709689 Msa0999050:three_prime_UTR
GTTATGGTGAAGAGTGAAAA+CGG 0.479425 6_4:+80718044 None:intergenic
ACTTCAAGAAGGAGGAAATC+AGG 0.479603 6_4:-80713867 Msa0999050:intron
TTCAAGCGGATTTAAATTTG+AGG 0.480362 6_4:+80712028 None:intergenic
TGATGGTATGCATGTGGCAT+TGG 0.480583 6_4:+80711529 None:intergenic
TGCTGTTAGAGATGGGGACT+CGG 0.480966 6_4:-80717701 Msa0999050:exon
GCCACATTATTATATTGCAT+TGG 0.481046 6_4:+80711240 None:intergenic
GAAGGGGTTAGAGCTGGGAG+TGG 0.481281 6_4:+80709823 None:intergenic
ATGAACTGCTCTGGCTTGGA+GGG 0.485297 6_4:+80710599 None:intergenic
AATGGATTTGTTGACCTTGA+CGG 0.485427 6_4:+80710965 None:intergenic
ACCTTCTGTACCCACAGGAC+AGG 0.486237 6_4:-80711566 Msa0999050:CDS
ATGCATGCAATGAACTGCTC+TGG 0.489391 6_4:+80710590 None:intergenic
AACTGCATCCTCTGGCAGCT+TGG 0.489875 6_4:-80712258 Msa0999050:CDS
CTGAAGGTGGTACATTAGGC+AGG 0.490324 6_4:+80710470 None:intergenic
ATTGACAACTGGAGGACGAC+CGG 0.490377 6_4:+80713169 None:intergenic
TACACTTGGGGCTTGATGTG+GGG 0.490664 6_4:+80710922 None:intergenic
TACATTATTATGAGGTGATA+CGG 0.491099 6_4:+80711801 None:intergenic
TCTCAAGTTTAATCTCTACT+TGG 0.492012 6_4:+80712219 None:intergenic
TGCCTCAAAGCCTGCTAATG+AGG 0.492851 6_4:-80711506 Msa0999050:CDS
TCACACGATGTGTAAATTCA+CGG 0.492952 6_4:+80713933 None:intergenic
GTCATACGCTGGGCAGCAAA+TGG 0.493340 6_4:-80710269 Msa0999050:CDS
CAAGAAGTTGCTGTTAGAGA+TGG 0.494320 6_4:-80717709 Msa0999050:exon
AAATCCCAGTGATGACAATT+GGG 0.494998 6_4:-80712093 Msa0999050:CDS
TCTTCGATAAGGGGAGTTTG+AGG 0.495366 6_4:-80709555 Msa0999050:three_prime_UTR
GGGTGGTGCTGTAAATAGTC+AGG 0.496495 6_4:-80711704 Msa0999050:intron
AGAGAAATTTACCTTGGCAT+TGG 0.497729 6_4:+80710235 None:intergenic
AACTGTTTATTCCTATAGGA+GGG 0.499191 6_4:-80709593 Msa0999050:three_prime_UTR
AGCCTCATTAGCAGGCTTTG+AGG 0.499841 6_4:+80711504 None:intergenic
TCCTGTGTGTCTTCGTATGG+AGG 0.503139 6_4:+80713281 None:intergenic
TTAAGCATGTTTATGAGGAT+AGG 0.505517 6_4:-80713575 Msa0999050:CDS
AATCTACTGTTACAAATACA+TGG 0.505680 6_4:+80709447 None:intergenic
AATTGTTGACTAGCAGAAGC+AGG 0.505821 6_4:+80711739 None:intergenic
TGTTGGGCTTGAGGAACTGT+TGG 0.505985 6_4:+80712149 None:intergenic
CCTTGAAAGGATGGCAGGGG+TGG 0.506197 6_4:+80710496 None:intergenic
TCGTGTGAAATCAGTTTCAA+TGG 0.506647 6_4:-80713918 Msa0999050:CDS
CCAAAACTAGGAGCTGCTGC+TGG 0.507856 6_4:+80711865 None:intergenic
TGGTTGCGGATGCTGCAAAC+TGG 0.508220 6_4:+80711768 None:intergenic
AAGAAGTTGCTGTTAGAGAT+GGG 0.509895 6_4:-80717708 Msa0999050:exon
TGGGATGGATTGCCTAGGTT+CGG 0.509902 6_4:+80710433 None:intergenic
AGTCCAGGTGGAAGAAGTCC+TGG 0.510458 6_4:-80713236 Msa0999050:CDS
CAAGTACTTACCTGCTGTCA+GGG 0.511056 6_4:+80713693 None:intergenic
AAATTTGTGCACACATATTG+TGG 0.512763 6_4:+80714495 None:intergenic
TACTTTCAGGGTCATACGCT+GGG 0.514743 6_4:-80710279 Msa0999050:intron
TCAATGTGCAGGCAAGGAGT+TGG 0.515383 6_4:-80709917 Msa0999050:intron
ATGGGGTTGGAGTCCAGGCA+TGG 0.516624 6_4:+80710413 None:intergenic
AAACTGTTTATTCCTATAGG+AGG 0.519443 6_4:-80709594 Msa0999050:three_prime_UTR
CGTTCCTGTGTGTCTTCGTA+TGG 0.519529 6_4:+80713278 None:intergenic
TTTGTTTGCACTAATTGTAG+TGG 0.521154 6_4:-80714465 Msa0999050:CDS
GATGGATTGCCTAGGTTCGG+AGG 0.521926 6_4:+80710436 None:intergenic
TGGGGTTGGAGTCCAGGCAT+GGG 0.524458 6_4:+80710414 None:intergenic
GGGAACCTTGAAAGGATGGC+AGG 0.524803 6_4:+80710491 None:intergenic
AGAAGAAGATGAAGAAGAAA+CGG 0.525321 6_4:+80717973 None:intergenic
CGCACCGTGCAAGGAAGACA+TGG 0.526086 6_4:+80710654 None:intergenic
ACACTAGATTGTTGGGCTTG+AGG 0.528428 6_4:+80712140 None:intergenic
TCCTCTCGGTGGTTTGTCAG+AGG 0.529596 6_4:+80713533 None:intergenic
TGTTTACTGCTGACATCGAA+TGG 0.529956 6_4:+80710947 None:intergenic
TTTCAGAGAACTGCATCCTC+TGG 0.530588 6_4:-80712266 Msa0999050:intron
GGGTGCATTGGGAGTGATGG+TGG 0.532284 6_4:+80710619 None:intergenic
GGTTTAACTTCTACAGCAGA+AGG 0.534195 6_4:+80711460 None:intergenic
TCTTTACCTTCTCATACTCC+AGG 0.534522 6_4:-80711975 Msa0999050:CDS
TAGCAGGCTTTGAGGCATGA+TGG 0.534756 6_4:+80711512 None:intergenic
AGGGGTGGAGTCCATGCATG+TGG 0.538337 6_4:+80710511 None:intergenic
CCTTCTGTACCCACAGGACA+GGG 0.538600 6_4:-80711565 Msa0999050:CDS
TTCCTGCTCCAGTTCAAGGT+TGG 0.540598 6_4:-80711287 Msa0999050:CDS
GGCGATTATAAGAGAAGTCC+CGG 0.541192 6_4:-80713188 Msa0999050:CDS
GGATGGCACTGAAGTGCCAC+TGG 0.541437 6_4:+80711822 None:intergenic
ATTAGGCAGGGAACCTTGAA+AGG 0.541766 6_4:+80710483 None:intergenic
CAGCAGCTGCCTGATAGGCC+GGG 0.542449 6_4:-80709848 Msa0999050:CDS
AGGAACGTCGTTATGGTGAC+AGG 0.542766 6_4:-80713262 Msa0999050:CDS
CTGTTTATTCCTATAGGAGG+GGG 0.543235 6_4:-80709591 Msa0999050:three_prime_UTR
GAAGCAGGGAACGTTGGTTG+CGG 0.544995 6_4:+80711754 None:intergenic
GTTGGGAATTTCGGAACTGA+GGG 0.545099 6_4:-80709899 Msa0999050:CDS
CGGGTGGGCTTGAAGAGCCC+AGG 0.546386 6_4:+80713069 None:intergenic
GGCAGGGAACCTTGAAAGGA+TGG 0.546497 6_4:+80710487 None:intergenic
TAACAGTAGATTGAGAGTAA+TGG 0.546744 6_4:-80709436 Msa0999050:three_prime_UTR
CCTGACTGCAAAACAGGTTG+AGG 0.547283 6_4:+80712116 None:intergenic
AATTCTTTACATTACCCGAA+TGG 0.547762 6_4:+80709785 None:intergenic
GATAGAGAGATTGAATGAAG+GGG 0.547981 6_4:-80709519 Msa0999050:three_prime_UTR
CTTGACGGCTGTGAATAACT+TGG 0.548241 6_4:+80710980 None:intergenic
ACCGTGCAGTCTTCAACCCT+GGG 0.549066 6_4:-80710541 Msa0999050:CDS
AATGAAGGATTTGTGATGAC+CGG 0.549674 6_4:-80709651 Msa0999050:three_prime_UTR
AGAGCAGTTCATTGCATGCA+TGG 0.549789 6_4:-80710588 Msa0999050:CDS
GCAATTCTTTCCCTGACAGC+AGG 0.550264 6_4:-80713703 Msa0999050:intron
TCAACAATTTCCACCGTCCG+TGG 0.551773 6_4:-80711725 Msa0999050:CDS
TGAAGACTGCACGGTTCCTA+CGG 0.553012 6_4:+80710549 None:intergenic
CCTGTGTGTCTTCGTATGGA+GGG 0.554844 6_4:+80713282 None:intergenic
TTTGTCCCAATTGTCCGTGT+CGG 0.555220 6_4:-80712000 Msa0999050:CDS
GTATCACCTCATAATAATGT+AGG 0.555607 6_4:-80711799 Msa0999050:CDS
ATTCGGATGCCCCTGTCCTG+TGG 0.557545 6_4:+80711555 None:intergenic
ATTAGGCAACGCACCGTGCA+AGG 0.558361 6_4:+80710645 None:intergenic
TGGGTTATCCACCACATGCA+TGG 0.559865 6_4:-80710522 Msa0999050:CDS
CTCATAATAATGTAGGACAA+TGG 0.560712 6_4:-80711792 Msa0999050:CDS
AACTTACATGTGTTTGTACA+CGG 0.562698 6_4:+80709713 None:intergenic
TTCGGATGCCCCTGTCCTGT+GGG 0.563942 6_4:+80711556 None:intergenic
TCTCTAACAGGTCGGACCAC+GGG 0.565901 6_4:+80713050 None:intergenic
GTTCCTACGGTAGGCAGTGG+TGG 0.566137 6_4:+80710562 None:intergenic
TCTCATACTCCAGGAGTCCA+AGG 0.567882 6_4:-80711966 Msa0999050:intron
ATAGAGAGATTGAATGAAGG+GGG 0.568072 6_4:-80709518 Msa0999050:three_prime_UTR
ATGCATGTGGTGGATAACCC+AGG 0.569423 6_4:+80710524 None:intergenic
TTGACAACTGGAGGACGACC+GGG 0.570980 6_4:+80713170 None:intergenic
GATCCAGGACTTCTTCCACC+TGG 0.571041 6_4:+80713233 None:intergenic
ATGGATTGCCTAGGTTCGGA+GGG 0.571131 6_4:+80710437 None:intergenic
AAACATGCTTAACAAACTCT+CGG 0.571606 6_4:+80713586 None:intergenic
TCTAACCCCTTCCCCAAAGG+AGG 0.572129 6_4:-80709812 Msa0999050:CDS
ATACTTTCAGGGTCATACGC+TGG 0.572536 6_4:-80710280 Msa0999050:intron
GCATATGATGACGATGGGGT+TGG 0.573061 6_4:+80710400 None:intergenic
AAGTTACAAATGCATAATGA+AGG 0.574078 6_4:-80709666 Msa0999050:three_prime_UTR
CTGTGTCAGTGATGAAGCAT+CGG 0.574879 6_4:+80712959 None:intergenic
TGGCAAATGGGTCCTCCGCA+GGG 0.576406 6_4:-80711267 Msa0999050:CDS
GGGCTCTTCAAGCCCACCCG+TGG 0.576424 6_4:-80713066 Msa0999050:CDS
GATTTGTGATGACCGGCTCT+GGG 0.577411 6_4:-80709644 Msa0999050:three_prime_UTR
GCTGAGAAATTGCCAAAACT+AGG 0.579045 6_4:+80711853 None:intergenic
AGGAGAGTTGAGGCATATCA+GGG 0.582512 6_4:-80713317 Msa0999050:CDS
ATTACGCACCCTCCGAACCT+AGG 0.582738 6_4:-80710445 Msa0999050:CDS
AATCTCCATCTGATACTCTA+CGG 0.582978 6_4:+80713129 None:intergenic
GAACTGGAGCAGGAAAGTAC+TGG 0.583420 6_4:+80711295 None:intergenic
ATTTCCTCCTTCTTGAAGTG+CGG 0.583644 6_4:+80713871 None:intergenic
AGGCATGGGATGGATTGCCT+AGG 0.584344 6_4:+80710428 None:intergenic
ACGGTTCCTACGGTAGGCAG+TGG 0.584624 6_4:+80710559 None:intergenic
AGAAATGTTGAAGTTCTGGA+AGG 0.584790 6_4:+80717998 None:intergenic
CTGATGCATATGATGACGAT+GGG 0.584853 6_4:+80710395 None:intergenic
ACTGTTTATTCCTATAGGAG+GGG 0.584994 6_4:-80709592 Msa0999050:three_prime_UTR
ATCTCTAACAGGTCGGACCA+CGG 0.585179 6_4:+80713049 None:intergenic
CTGGATCTGATCAAGAAAGT+AGG 0.585551 6_4:-80713217 Msa0999050:CDS
TTTCCGCTGTTTGGTTTGGG+GGG 0.588613 6_4:+80712987 None:intergenic
ACTATTTACAGCACCACCCA+CGG 0.589023 6_4:+80711708 None:intergenic
GAAGACCGTAGAGTATCAGA+TGG 0.589229 6_4:-80713134 Msa0999050:CDS
CGCCAATCATTGACAACTGG+AGG 0.591446 6_4:+80713161 None:intergenic
GGCTGTGAATAACTTGGCAC+AGG 0.592606 6_4:+80710986 None:intergenic
CGAATGGATTCCCTCCTTTG+GGG 0.593184 6_4:+80709801 None:intergenic
GGAACCTTGAAAGGATGGCA+GGG 0.595041 6_4:+80710492 None:intergenic
GGCACTGAAGTGCCACTGGG+TGG 0.595804 6_4:+80711826 None:intergenic
CCCGAACGAGCTAGAGACCT+GGG 0.598543 6_4:-80713086 Msa0999050:CDS
AGCTCTAACCCCTTCCCCAA+AGG 0.598694 6_4:-80709815 Msa0999050:CDS
TATGGTGACAGGTCTAGTCC+AGG 0.598747 6_4:-80713251 Msa0999050:CDS
GCTGTAGAAGTTAAACCAAG+TGG 0.599496 6_4:-80711454 Msa0999050:CDS
CAATTTCCACCGTCCGTGGG+TGG 0.599827 6_4:-80711721 Msa0999050:CDS
TCCAATGCAATATAATAATG+TGG 0.602071 6_4:-80711241 Msa0999050:CDS
GGTGGAGTCCATGCATGTGG+TGG 0.602942 6_4:+80710514 None:intergenic
TAACAGGTCGGACCACGGGT+GGG 0.604829 6_4:+80713054 None:intergenic
AATCTTACGACCTTTCCTCT+CGG 0.609041 6_4:+80713519 None:intergenic
GGAGGGTGCGTAATGCCTGA+AGG 0.609235 6_4:+80710454 None:intergenic
TCCCGAACGAGCTAGAGACC+TGG 0.613069 6_4:-80713087 Msa0999050:CDS
TGGACTCCTGGAGTATGAGA+AGG 0.613077 6_4:+80711969 None:intergenic
AATATACTATCTTCGATAAG+GGG 0.613296 6_4:-80709564 Msa0999050:three_prime_UTR
ATCTACTGTTACAAATACAT+GGG 0.614768 6_4:+80709448 None:intergenic
TGCATTGGAAAGCCCTGCGG+AGG 0.614805 6_4:+80711255 None:intergenic
GTAATGTAAAGAATTATCCA+TGG 0.614944 6_4:-80709777 Msa0999050:exon
CTAACAGGTCGGACCACGGG+TGG 0.615242 6_4:+80713053 None:intergenic
CCAAAATATCTCTAACAGGT+CGG 0.617155 6_4:+80713042 None:intergenic
TTCTCAGCTTTCCCACCCAG+TGG 0.617961 6_4:-80711838 Msa0999050:CDS
CGATGCTTCATCACTGACAC+AGG 0.618098 6_4:-80712958 Msa0999050:intron
CTAGCAGAAGCAGGGAACGT+TGG 0.618799 6_4:+80711748 None:intergenic
AGTTGGGAATTTCGGAACTG+AGG 0.619777 6_4:-80709900 Msa0999050:CDS
CTTACGACCTTTCCTCTCGG+TGG 0.622626 6_4:+80713522 None:intergenic
GGTGAAGAGTGAAAACGGAA+AGG 0.622706 6_4:+80718049 None:intergenic
CAACAATTTCCACCGTCCGT+GGG 0.626213 6_4:-80711724 Msa0999050:CDS
TGGAGCAACAGGTTCAGGAT+CGG 0.626425 6_4:+80712169 None:intergenic
TGACAAACCACCGAGAGGAA+AGG 0.627098 6_4:-80713529 Msa0999050:CDS
GAAGCCCAATTGTCATCACT+GGG 0.627573 6_4:+80712089 None:intergenic
GAAGTTACCGCACTTCAAGA+AGG 0.627897 6_4:-80713878 Msa0999050:CDS
CATGCACCTTCTGTACCCAC+AGG 0.628811 6_4:-80711571 Msa0999050:CDS
CAAGTTATTCACAGCCGTCA+AGG 0.628835 6_4:-80710979 Msa0999050:CDS
TCATATGCATCAGTCCCACC+AGG 0.629975 6_4:-80710385 Msa0999050:intron
CTAACCCCTTCCCCAAAGGA+GGG 0.631904 6_4:-80709811 Msa0999050:CDS
CAACTAATATACCAATGCCA+AGG 0.633465 6_4:-80710246 Msa0999050:intron
ATCAGATGGAGATTATAAGG+TGG 0.635684 6_4:-80713120 Msa0999050:CDS
TGAAGGTGGTACATTAGGCA+GGG 0.636868 6_4:+80710471 None:intergenic
CTATGAAAACAGGAGAGTTG+AGG 0.640259 6_4:-80713327 Msa0999050:CDS
GAACCTTGAAAGGATGGCAG+GGG 0.640950 6_4:+80710493 None:intergenic
TGGGACAAAACAGATTCAAG+CGG 0.641329 6_4:+80712014 None:intergenic
CCCTCCATACGAAGACACAC+AGG 0.642212 6_4:-80713282 Msa0999050:CDS
ACCCAGGGTTGAAGACTGCA+CGG 0.643062 6_4:+80710540 None:intergenic
TTGAAAGTCACATACACTTG+GGG 0.645670 6_4:+80710910 None:intergenic
AGAAGTTGCTGTTAGAGATG+GGG 0.647994 6_4:-80717707 Msa0999050:exon
CCGTGCAAGGAAGACATGGA+AGG 0.650622 6_4:+80710658 None:intergenic
TTATTATGAGGTGATACGGA+TGG 0.654263 6_4:+80711805 None:intergenic
ACAGCACCACCCACGGACGG+TGG 0.657400 6_4:+80711715 None:intergenic
ATTGTTGACTAGCAGAAGCA+GGG 0.663307 6_4:+80711740 None:intergenic
ACAGGATAAACATACCTGGT+GGG 0.664986 6_4:+80710371 None:intergenic
GGTACAGAAGGTGCATGCAA+TGG 0.666830 6_4:+80711577 None:intergenic
TTTACAGCACCACCCACGGA+CGG 0.668040 6_4:+80711712 None:intergenic
ACTGGATACCAAGCTGCCAG+AGG 0.668169 6_4:+80712250 None:intergenic
GTTACCGCACTTCAAGAAGG+AGG 0.668810 6_4:-80713875 Msa0999050:CDS
AATCCACCACTGCCTACCGT+AGG 0.677678 6_4:-80710565 Msa0999050:CDS
TGTTTGTACACGGTGCAACA+TGG 0.680628 6_4:+80709723 None:intergenic
GGTGACAGGTCTAGTCCAGG+TGG 0.685795 6_4:-80713248 Msa0999050:CDS
GATGGCACTGAAGTGCCACT+GGG 0.689606 6_4:+80711823 None:intergenic
AATGCAATATAATAATGTGG+CGG 0.690651 6_4:-80711238 Msa0999050:intron
GCACTGAAGTGCCACTGGGT+GGG 0.693382 6_4:+80711827 None:intergenic
ACTGATGCATATGATGACGA+TGG 0.699854 6_4:+80710394 None:intergenic
TATTGCATTGGAAAGCCCTG+CGG 0.701173 6_4:+80711252 None:intergenic
TGCATGTGGTGGATAACCCA+GGG 0.705185 6_4:+80710525 None:intergenic
ACCTCTGACAAACCACCGAG+AGG 0.706606 6_4:-80713534 Msa0999050:CDS
GAGGCATGATGGTATGCATG+TGG 0.707104 6_4:+80711523 None:intergenic
CTTCTGTACCCACAGGACAG+GGG 0.715786 6_4:-80711564 Msa0999050:CDS
AGAGTTGAGGCATATCAGGG+AGG 0.741370 6_4:-80713314 Msa0999050:CDS
AGAAGGTAAAGATTCCGACA+CGG 0.768766 6_4:+80711986 None:intergenic
TGATGCATATGATGACGATG+GGG 0.769784 6_4:+80710396 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAGTAATTTTTTTATAGTT+TGG + chr6_4:80711211-80711230 None:intergenic 10.0%
!!! AGATTTTTATATTAGATTTT+GGG - chr6_4:80712236-80712255 Msa0999050:CDS 10.0%
!! AAAGAAAATAATTAATGTAA+CGG + chr6_4:80712860-80712879 None:intergenic 10.0%
!!! AACTTTTTATTAAATAGAAT+AGG + chr6_4:80714610-80714629 None:intergenic 10.0%
!! ATTAAACAGTAAATTAAAAA+CGG + chr6_4:80714933-80714952 None:intergenic 10.0%
!!! TTCTTTTTAATTAAAAAGAA+AGG + chr6_4:80716284-80716303 None:intergenic 10.0%
!!! TTGTTTCTTTTTAAATTTTT+GGG - chr6_4:80717916-80717935 Msa0999050:intron 10.0%
!! AAATGAATTACATTAGATTA+TGG - chr6_4:80709836-80709855 Msa0999050:CDS 15.0%
!!! AAAATTGCTATTTTTTTGTT+GGG + chr6_4:80710372-80710391 None:intergenic 15.0%
!!! TTGCTATTTTTTAAAGATAA+GGG + chr6_4:80710428-80710447 None:intergenic 15.0%
!!! ATTGCTATTTTTTAAAGATA+AGG + chr6_4:80710429-80710448 None:intergenic 15.0%
!!! AAATTGCTATTTTTTTTTGT+TGG - chr6_4:80710518-80710537 Msa0999050:CDS 15.0%
!!! AATTGCTATTTTTTTTTGTT+GGG - chr6_4:80710519-80710538 Msa0999050:CDS 15.0%
!! TTGTAAAAATAAGTTATGAT+AGG - chr6_4:80712053-80712072 Msa0999050:CDS 15.0%
!!! GAGATTTTTATATTAGATTT+TGG - chr6_4:80712235-80712254 Msa0999050:CDS 15.0%
!!! ATAAGATTTTCTTATTAGTT+AGG - chr6_4:80712433-80712452 Msa0999050:intron 15.0%
!!! TAAGATTTTCTTATTAGTTA+GGG - chr6_4:80712434-80712453 Msa0999050:intron 15.0%
!!! TTAAAATTGGATGTTATTTA+TGG - chr6_4:80712466-80712485 Msa0999050:intron 15.0%
!! TCAAATTTATCTCTTTATTA+AGG + chr6_4:80712785-80712804 None:intergenic 15.0%
!!! ATTTTCTTTTATACTTTTGA+AGG - chr6_4:80712871-80712890 Msa0999050:intron 15.0%
!!! TTTTCTTTTATACTTTTGAA+GGG - chr6_4:80712872-80712891 Msa0999050:intron 15.0%
!!! AAGAGATTTATTTTAAAGAA+TGG - chr6_4:80713655-80713674 Msa0999050:intron 15.0%
!!! AGAGATTTATTTTAAAGAAT+GGG - chr6_4:80713656-80713675 Msa0999050:intron 15.0%
!! TTATGATTAATAATCATAGA+GGG - chr6_4:80716258-80716277 Msa0999050:intron 15.0%
!!! TTGTGTTTTATATGAATAAA+GGG + chr6_4:80717325-80717344 None:intergenic 15.0%
!!! ATTGTGTTTTATATGAATAA+AGG + chr6_4:80717326-80717345 None:intergenic 15.0%
!!! TAAAATTGATGATAATAGAT+TGG - chr6_4:80717414-80717433 Msa0999050:intron 15.0%
!!! GTTGTTTCTTTTTAAATTTT+TGG - chr6_4:80717915-80717934 Msa0999050:intron 15.0%
!! AAAAATTGAAATGAAATGAC+GGG + chr6_4:80709283-80709302 None:intergenic 20.0%
!! GAAAAATTGAAATGAAATGA+CGG + chr6_4:80709284-80709303 None:intergenic 20.0%
!!! GTTTTATATGATGATTGTTA+TGG + chr6_4:80709366-80709385 None:intergenic 20.0%
!! TTGAATTTGATTATGATGAT+TGG - chr6_4:80709624-80709643 Msa0999050:three_prime_UTR 20.0%
!! ATGTATTAACTGTAATAGTT+TGG - chr6_4:80709778-80709797 Msa0999050:exon 20.0%
!! ATTACGTTAAAATAGATTCT+AGG - chr6_4:80710327-80710346 Msa0999050:intron 20.0%
!!! AAATTGCTATTTTTTTGTTG+GGG + chr6_4:80710371-80710390 None:intergenic 20.0%
!!! CAAAATTGCTATTTTTTTGT+TGG + chr6_4:80710373-80710392 None:intergenic 20.0%
!!! CAACAAAAAAATAGCAATTT+TGG - chr6_4:80710371-80710390 Msa0999050:intron 20.0%
!!! TGCTTTTTTTTAAAGATAGA+GGG + chr6_4:80710397-80710416 None:intergenic 20.0%
!!! TCTTTAAAAAAAAGCACTTT+TGG - chr6_4:80710401-80710420 Msa0999050:CDS 20.0%
!!! TGCTATTTTTTAAAGATAAG+GGG + chr6_4:80710427-80710446 None:intergenic 20.0%
!!! ATTGCTATTTTTTTTTGTTG+GGG - chr6_4:80710520-80710539 Msa0999050:CDS 20.0%
!! TTGAATGAAGAAAATGAATT+AGG - chr6_4:80710730-80710749 Msa0999050:intron 20.0%
!! TGAATGAAGAAAATGAATTA+GGG - chr6_4:80710731-80710750 Msa0999050:intron 20.0%
!!! TAATTGTTATTACAATTAGC+TGG - chr6_4:80710757-80710776 Msa0999050:intron 20.0%
!! ATTGAATGAGAAAAATGAAT+TGG - chr6_4:80710166-80710185 Msa0999050:intron 20.0%
!!! TATTTTAATAAGTAGTTCAC+TGG - chr6_4:80712096-80712115 Msa0999050:CDS 20.0%
!!! ATTTTAATAAGTAGTTCACT+GGG - chr6_4:80712097-80712116 Msa0999050:CDS 20.0%
!!! AAGATTTTCTTATTAGTTAG+GGG - chr6_4:80712435-80712454 Msa0999050:intron 20.0%
!!! GTTGTGTGATATTTTTATTT+AGG - chr6_4:80712499-80712518 Msa0999050:intron 20.0%
!!! TAGATTTTATTTCGAAGATA+AGG - chr6_4:80712535-80712554 Msa0999050:intron 20.0%
!! ATACATAATATGCATAATTG+AGG + chr6_4:80712589-80712608 None:intergenic 20.0%
!!! TACATTTTAAAATGGCAATA+TGG + chr6_4:80714484-80714503 None:intergenic 20.0%
!! ATAAAAAGTTGAATTTCAGA+TGG - chr6_4:80714620-80714639 Msa0999050:intron 20.0%
!!! TGGGATATTTTATTTATGAA+TGG - chr6_4:80714742-80714761 Msa0999050:intron 20.0%
!! GTAAAATATTGTTTAGCTAA+TGG - chr6_4:80715731-80715750 Msa0999050:intron 20.0%
!!! ATTATTAATCATAAGGTGTT+TGG + chr6_4:80716252-80716271 None:intergenic 20.0%
!! CTCTATGATTATTAATCATA+AGG + chr6_4:80716259-80716278 None:intergenic 20.0%
!! CTTATGATTAATAATCATAG+AGG - chr6_4:80716257-80716276 Msa0999050:intron 20.0%
!! ACAAATTAAAAACATGCATT+TGG + chr6_4:80716331-80716350 None:intergenic 20.0%
!!! AAATGCATGTTTTTAATTTG+TGG - chr6_4:80716330-80716349 Msa0999050:intron 20.0%
!!! TAATGGTATCTTCATATTTT+TGG - chr6_4:80717972-80717991 Msa0999050:five_prime_UTR 20.0%
!!! ACATGATTATTTTAATGTTG+TGG - chr6_4:80718058-80718077 Msa0999050:five_prime_UTR 20.0%
!!! ATTCATCGATTCATTTTTCT+TGG - chr6_4:80709504-80709523 Msa0999050:three_prime_UTR 25.0%
! ACATAATTCAATGTAATCAC+AGG + chr6_4:80710024-80710043 None:intergenic 25.0%
!!! GTGCTTTTTTTTAAAGATAG+AGG + chr6_4:80710398-80710417 None:intergenic 25.0%
!!! TTGCTATTTTTTTTTGTTGG+GGG - chr6_4:80710521-80710540 Msa0999050:CDS 25.0%
!!! CTTTTAAAAACTTGCGATTT+TGG + chr6_4:80710548-80710567 None:intergenic 25.0%
!!! ATCGCAAGTTTTTAAAAGTT+AGG - chr6_4:80710550-80710569 Msa0999050:CDS 25.0%
!!! TCGCAAGTTTTTAAAAGTTA+GGG - chr6_4:80710551-80710570 Msa0999050:CDS 25.0%
! TTAGCTGGATTAATATATAG+TGG - chr6_4:80710772-80710791 Msa0999050:intron 25.0%
! AGTTCAATTAGTTAGTTAGT+TGG + chr6_4:80710813-80710832 None:intergenic 25.0%
! TTAGTGTCATGATTAGAAAA+AGG - chr6_4:80711056-80711075 Msa0999050:intron 25.0%
! TCAATTAGCTGAATATATAG+TGG - chr6_4:80711702-80711721 Msa0999050:intron 25.0%
! AATGTTCAACCATTTACAAA+TGG + chr6_4:80711945-80711964 None:intergenic 25.0%
!! TTTTAATAAGTAGTTCACTG+GGG - chr6_4:80712098-80712117 Msa0999050:CDS 25.0%
!!! GTCTATGGTCTTTTTTATTT+AGG - chr6_4:80712156-80712175 Msa0999050:CDS 25.0%
!!! CTTTTTTATTTAGGCGTAAA+TGG - chr6_4:80712165-80712184 Msa0999050:CDS 25.0%
! TATTTCATTTCAATCTTCAC+AGG - chr6_4:80712630-80712649 Msa0999050:intron 25.0%
! AGTTATTAACCTTGTGATTA+TGG + chr6_4:80712711-80712730 None:intergenic 25.0%
!! TCTGTTTGAATTCTTTTCAT+AGG - chr6_4:80712806-80712825 Msa0999050:intron 25.0%
!!! ATTTGTTTCTAATCCATACT+TGG - chr6_4:80713092-80713111 Msa0999050:CDS 25.0%
!!! TTTTGTAGTGTTGTTTGTAA+TGG - chr6_4:80713203-80713222 Msa0999050:CDS 25.0%
! AAGCAGAATGAAAAGAAATA+TGG + chr6_4:80713579-80713598 None:intergenic 25.0%
! ATCATTCTGATTGTCATATT+TGG - chr6_4:80713761-80713780 Msa0999050:intron 25.0%
! TTTCTTAAAAAAGTGAATCC+TGG + chr6_4:80713905-80713924 None:intergenic 25.0%
!!! ATAATGATAGCATTAGCTTT+TGG - chr6_4:80714722-80714741 Msa0999050:intron 25.0%
!!! TAATGATAGCATTAGCTTTT+GGG - chr6_4:80714723-80714742 Msa0999050:intron 25.0%
! TAAATAATGAATCAACCTCA+CGG + chr6_4:80714794-80714813 None:intergenic 25.0%
!!! TTATGTTTTCTTTTAAGACG+TGG - chr6_4:80714975-80714994 Msa0999050:intron 25.0%
!! CATTTGTCATTTACTTTGTT+TGG - chr6_4:80715003-80715022 Msa0999050:intron 25.0%
! TACATTATTATGAGGTGATA+CGG + chr6_4:80715593-80715612 None:intergenic 25.0%
! TCATAATAATGTAGGACAAT+GGG - chr6_4:80715600-80715619 Msa0999050:intron 25.0%
!! ATTTTACATGACAAGTTCAT+TGG + chr6_4:80715718-80715737 None:intergenic 25.0%
! TCCAATGCAATATAATAATG+TGG - chr6_4:80716150-80716169 Msa0999050:intron 25.0%
! AATGCAATATAATAATGTGG+CGG - chr6_4:80716153-80716172 Msa0999050:intron 25.0%
! ATGTGACTTTCAATGATTTA+TGG - chr6_4:80716491-80716510 Msa0999050:intron 25.0%
!!! TTTTTTTACATGCGATTCAT+TGG - chr6_4:80716673-80716692 Msa0999050:intron 25.0%
! ATTAACTGACGAATATTAAC+AGG + chr6_4:80717041-80717060 None:intergenic 25.0%
! TATTACTTGTCACTAGTAAA+AGG - chr6_4:80717444-80717463 Msa0999050:intron 25.0%
! GTAATGTAAAGAATTATCCA+TGG - chr6_4:80717614-80717633 Msa0999050:CDS 25.0%
! GTTTGAATTTACAAAAACCA+TGG + chr6_4:80717634-80717653 None:intergenic 25.0%
! AAGTTACAAATGCATAATGA+AGG - chr6_4:80717725-80717744 Msa0999050:five_prime_UTR 25.0%
! TGTAAACTGTTTATTCCTAT+AGG - chr6_4:80717794-80717813 Msa0999050:five_prime_UTR 25.0%
! ACAATATACTATCTTCGATA+AGG - chr6_4:80717825-80717844 Msa0999050:intron 25.0%
! CAATATACTATCTTCGATAA+GGG - chr6_4:80717826-80717845 Msa0999050:intron 25.0%
! AATATACTATCTTCGATAAG+GGG - chr6_4:80717827-80717846 Msa0999050:intron 25.0%
! ATCTACTGTTACAAATACAT+GGG + chr6_4:80717946-80717965 None:intergenic 25.0%
! AATCTACTGTTACAAATACA+TGG + chr6_4:80717947-80717966 None:intergenic 25.0%
AAGAAAGAAAGAGAGAGAAA+CGG + chr6_4:80709316-80709335 None:intergenic 30.0%
AGAAGAAGATGAAGAAGAAA+CGG + chr6_4:80709421-80709440 None:intergenic 30.0%
!!! TTTTAAAGCTTGAACCGAAT+CGG - chr6_4:80709753-80709772 Msa0999050:three_prime_UTR 30.0%
TGGTATATTTGTGTTGAATG+AGG - chr6_4:80709856-80709875 Msa0999050:CDS 30.0%
GCTGAATATATTGTAGTAGT+TGG - chr6_4:80709920-80709939 Msa0999050:intron 30.0%
TGTTTGTTTATGTGCTTCAT+AGG - chr6_4:80710094-80710113 Msa0999050:intron 30.0%
! CTTACACAGTTGAAATTTTG+CGG - chr6_4:80710248-80710267 Msa0999050:CDS 30.0%
AAAACATTGCAAAACTGCAA+AGG + chr6_4:80710481-80710500 None:intergenic 30.0%
! TTGCAATGTTTTGTAAAGCT+AGG - chr6_4:80710489-80710508 Msa0999050:CDS 30.0%
! TGCAATGTTTTGTAAAGCTA+GGG - chr6_4:80710490-80710509 Msa0999050:CDS 30.0%
!! CGCAAGTTTTTAAAAGTTAG+GGG - chr6_4:80710552-80710571 Msa0999050:CDS 30.0%
!! GCAAGTTTTTAAAAGTTAGG+GGG - chr6_4:80710553-80710572 Msa0999050:CDS 30.0%
!! ATCTAGCTTAAATGCACTTT+TGG + chr6_4:80710579-80710598 None:intergenic 30.0%
!! AAAATAACTAAGAAGCATCG+AGG - chr6_4:80710840-80710859 Msa0999050:intron 30.0%
TAGTATCACACATAACACAT+TGG + chr6_4:80711016-80711035 None:intergenic 30.0%
TGCAAAATATTGTGCAATAG+CGG + chr6_4:80711568-80711587 None:intergenic 30.0%
! AGTGTTTAAAGTCAATGAGT+TGG + chr6_4:80711776-80711795 None:intergenic 30.0%
TTGACTTTAAACACTCTCTT+AGG - chr6_4:80711781-80711800 Msa0999050:CDS 30.0%
TGAATTGTAACTAGCTAACT+TGG - chr6_4:80711854-80711873 Msa0999050:CDS 30.0%
ATAGTCTGTCCATTTGTAAA+TGG - chr6_4:80711933-80711952 Msa0999050:intron 30.0%
TTACAAGACTATCTCATATC+AGG + chr6_4:80712039-80712058 None:intergenic 30.0%
ATAAGTTATGATAGGTCCAT+AGG - chr6_4:80712061-80712080 Msa0999050:CDS 30.0%
AATAAGCCAAAAACAACCTA+TGG + chr6_4:80712080-80712099 None:intergenic 30.0%
! AGGCGTAAATGGTTTAAAAT+TGG - chr6_4:80712176-80712195 Msa0999050:CDS 30.0%
!!! ACCCTTTTTTATCATGCATT+CGG - chr6_4:80712264-80712283 Msa0999050:intron 30.0%
ACCGAATGCATGATAAAAAA+GGG + chr6_4:80712268-80712287 None:intergenic 30.0%
AACCGAATGCATGATAAAAA+AGG + chr6_4:80712269-80712288 None:intergenic 30.0%
TCTTATTAGTTAGGGGTAAA+TGG - chr6_4:80712442-80712461 Msa0999050:intron 30.0%
! AGGGGTAAATGGTTTAAAAT+TGG - chr6_4:80712453-80712472 Msa0999050:intron 30.0%
! ATTGGATGTTATTTATGGAC+AGG - chr6_4:80712471-80712490 Msa0999050:intron 30.0%
TATTTCGAAGATAAGGTCAT+TGG - chr6_4:80712542-80712561 Msa0999050:intron 30.0%
ATTTCGAAGATAAGGTCATT+GGG - chr6_4:80712543-80712562 Msa0999050:intron 30.0%
AAATTTGTGCACACATATTG+TGG + chr6_4:80712899-80712918 None:intergenic 30.0%
AATATGTGTGCACAAATTTC+TGG - chr6_4:80712900-80712919 Msa0999050:intron 30.0%
TTTGTTTGCACTAATTGTAG+TGG - chr6_4:80712926-80712945 Msa0999050:intron 30.0%
TGTATTCAACTCAAATCACA+GGG + chr6_4:80713009-80713028 None:intergenic 30.0%
ATGTATTCAACTCAAATCAC+AGG + chr6_4:80713010-80713029 None:intergenic 30.0%
! AATACATGTTTCAGAGTACT+TGG - chr6_4:80713023-80713042 Msa0999050:CDS 30.0%
CAAAAAATCAGTAATACTGC+TGG + chr6_4:80713062-80713081 None:intergenic 30.0%
TCTGCAACTATACATGAAAA+CGG + chr6_4:80713729-80713748 None:intergenic 30.0%
AAACATGCTTAACAAACTCT+CGG + chr6_4:80713808-80713827 None:intergenic 30.0%
! GTTTGTTAAGCATGTTTATG+AGG - chr6_4:80713811-80713830 Msa0999050:intron 30.0%
TTAAGCATGTTTATGAGGAT+AGG - chr6_4:80713816-80713835 Msa0999050:intron 30.0%
TTAAAAAAGTGAATCCTGGA+GGG + chr6_4:80713901-80713920 None:intergenic 30.0%
AGAACAGACTAAGTAAGAAT+TGG + chr6_4:80714006-80714025 None:intergenic 30.0%
AGTATCAGATGGAGATTATA+AGG - chr6_4:80714268-80714287 Msa0999050:intron 30.0%
GAGAAAATGTAATACCTCTT+AGG - chr6_4:80714372-80714391 Msa0999050:intron 30.0%
! GATGTTTTCAGTTATTCCTT+TGG - chr6_4:80714875-80714894 Msa0999050:intron 30.0%
TCTCAAGTTTAATCTCTACT+TGG + chr6_4:80715175-80715194 None:intergenic 30.0%
! TTCAAGCGGATTTAAATTTG+AGG + chr6_4:80715366-80715385 None:intergenic 30.0%
TTACAATATGTGTATCACCT+TGG + chr6_4:80715445-80715464 None:intergenic 30.0%
AGGTGATACACATATTGTAA+TGG - chr6_4:80715445-80715464 Msa0999050:intron 30.0%
GTATCACCTCATAATAATGT+AGG - chr6_4:80715592-80715611 Msa0999050:intron 30.0%
CATTGTCCTACATTATTATG+AGG + chr6_4:80715601-80715620 None:intergenic 30.0%
CTCATAATAATGTAGGACAA+TGG - chr6_4:80715599-80715618 Msa0999050:intron 30.0%
GTATTAATTTCACTCTGTTC+TGG - chr6_4:80715778-80715797 Msa0999050:intron 30.0%
CTAATTGTTAGCCAAACAAT+AGG + chr6_4:80716041-80716060 None:intergenic 30.0%
GCCACATTATTATATTGCAT+TGG + chr6_4:80716154-80716173 None:intergenic 30.0%
ATTGAAAGTCACATACACTT+GGG + chr6_4:80716485-80716504 None:intergenic 30.0%
AATGCAAGATGCTAACTTTA+TGG + chr6_4:80716547-80716566 None:intergenic 30.0%
! TCACAGTATATTGTTTCTCT+TGG - chr6_4:80716701-80716720 Msa0999050:intron 30.0%
ATTAACAGGATAAACATACC+TGG + chr6_4:80717027-80717046 None:intergenic 30.0%
TGATAAAAAAGCAAACGACT+AGG + chr6_4:80717073-80717092 None:intergenic 30.0%
!! TGAAAGTATTAACATGGTTC+AGG + chr6_4:80717100-80717119 None:intergenic 30.0%
TGAACCATGTTAATACTTTC+AGG - chr6_4:80717099-80717118 Msa0999050:intron 30.0%
GAACCATGTTAATACTTTCA+GGG - chr6_4:80717100-80717119 Msa0999050:intron 30.0%
GATTGAAGAGAAATTTACCT+TGG + chr6_4:80717165-80717184 None:intergenic 30.0%
ATGTATGGGAAATTAGATGA+AGG + chr6_4:80717269-80717288 None:intergenic 30.0%
TAGCATGAACTTCAATGATA+CGG - chr6_4:80717295-80717314 Msa0999050:intron 30.0%
ATCGCAATATTTCAAAAGCT+AGG + chr6_4:80717367-80717386 None:intergenic 30.0%
!!! TAGCTTTTGAAATATTGCGA+TGG - chr6_4:80717366-80717385 Msa0999050:intron 30.0%
!!! AGCTTTTGAAATATTGCGAT+GGG - chr6_4:80717367-80717386 Msa0999050:intron 30.0%
AATTCTTTACATTACCCGAA+TGG + chr6_4:80717609-80717628 None:intergenic 30.0%
AACTTACATGTGTTTGTACA+CGG + chr6_4:80717681-80717700 None:intergenic 30.0%
GTACAAACACATGTAAGTTT+CGG - chr6_4:80717682-80717701 Msa0999050:CDS 30.0%
GGTCGAAGTGAAAAATATTT+CGG - chr6_4:80717768-80717787 Msa0999050:five_prime_UTR 30.0%
AAACTGTTTATTCCTATAGG+AGG - chr6_4:80717797-80717816 Msa0999050:five_prime_UTR 30.0%
AACTGTTTATTCCTATAGGA+GGG - chr6_4:80717798-80717817 Msa0999050:intron 30.0%
TAGATAGAGAGATTGAATGA+AGG - chr6_4:80717870-80717889 Msa0999050:intron 30.0%
AGATAGAGAGATTGAATGAA+GGG - chr6_4:80717871-80717890 Msa0999050:intron 30.0%
AAAAAGAAACAACGACTGAA+GGG + chr6_4:80717908-80717927 None:intergenic 30.0%
TAAAAAGAAACAACGACTGA+AGG + chr6_4:80717909-80717928 None:intergenic 30.0%
TAACAGTAGATTGAGAGTAA+TGG - chr6_4:80717955-80717974 Msa0999050:intron 30.0%
GTTATGGTGAAGAGTGAAAA+CGG + chr6_4:80709350-80709369 None:intergenic 35.0%
!! AGAAATGTTGAAGTTCTGGA+AGG + chr6_4:80709396-80709415 None:intergenic 35.0%
GGTTAGAAATGTTGAAGTTC+TGG + chr6_4:80709400-80709419 None:intergenic 35.0%
! AAGAAGTTGCTGTTAGAGAT+GGG - chr6_4:80709683-80709702 Msa0999050:three_prime_UTR 35.0%
CAGTTAATACATCTCCGATT+CGG + chr6_4:80709770-80709789 None:intergenic 35.0%
TTCAATGTAATCACAGGTGT+CGG + chr6_4:80710018-80710037 None:intergenic 35.0%
! GCAATGTTTTGTAAAGCTAG+GGG - chr6_4:80710491-80710510 Msa0999050:CDS 35.0%
! CAATGTTTTGTAAAGCTAGG+GGG - chr6_4:80710492-80710511 Msa0999050:CDS 35.0%
AGTTTGGCTAATTCAGTAGT+TGG + chr6_4:80711195-80711214 None:intergenic 35.0%
AAATGCATCTGCGATTCAAT+TGG + chr6_4:80711244-80711263 None:intergenic 35.0%
! TCAAATGTAGAAGCTAGCTT+AGG - chr6_4:80711317-80711336 Msa0999050:CDS 35.0%
GTAGAGAATCAGAGAAGATA+TGG - chr6_4:80711344-80711363 Msa0999050:intron 35.0%
TTGCACTAAATAGCGTATCA+CGG - chr6_4:80711583-80711602 Msa0999050:intron 35.0%
! TTTTCTCATTCGATCAGTGT+TGG + chr6_4:80711660-80711679 None:intergenic 35.0%
CACTCTCTTAGGTAATAGAT+TGG - chr6_4:80711792-80711811 Msa0999050:CDS 35.0%
TACAAATGGACAGACTATGT+CGG + chr6_4:80711931-80711950 None:intergenic 35.0%
TCAGGAGATAAGTTCAAATG+AGG + chr6_4:80712021-80712040 None:intergenic 35.0%
!! ATAGGTCCATAGGTTGTTTT+TGG - chr6_4:80712071-80712090 Msa0999050:CDS 35.0%
AAAAGACCATAGACACGTTT+GGG + chr6_4:80712150-80712169 None:intergenic 35.0%
AAAAAGACCATAGACACGTT+TGG + chr6_4:80712151-80712170 None:intergenic 35.0%
TTTATCATGCATTCGGTTAG+TGG - chr6_4:80712271-80712290 Msa0999050:intron 35.0%
!! TATCGTCCTCATTTTTGTAG+TGG - chr6_4:80712315-80712334 Msa0999050:intron 35.0%
!! ATCGTCCTCATTTTTGTAGT+GGG - chr6_4:80712316-80712335 Msa0999050:intron 35.0%
!!! ATTTTTGTAGTGGGCAACTT+GGG - chr6_4:80712325-80712344 Msa0999050:intron 35.0%
! ATTACGAGCAGTGCTTTAAA+AGG + chr6_4:80712415-80712434 None:intergenic 35.0%
TTTCGAAGATAAGGTCATTG+GGG - chr6_4:80712544-80712563 Msa0999050:intron 35.0%
TTATGTATCATCGTTGCTTG+AGG - chr6_4:80712601-80712620 Msa0999050:intron 35.0%
! TTGTGATTATGGTAGTGTAC+AGG + chr6_4:80712700-80712719 None:intergenic 35.0%
TGTACACTACCATAATCACA+AGG - chr6_4:80712699-80712718 Msa0999050:intron 35.0%
TTCCAATGGAATCTAGAGAA+TGG + chr6_4:80712753-80712772 None:intergenic 35.0%
CTAGATTCCATTGGAAAAAC+AGG - chr6_4:80712757-80712776 Msa0999050:intron 35.0%
!! TAAGGATCCTGTTTTTCCAA+TGG + chr6_4:80712767-80712786 None:intergenic 35.0%
AACAGAAGTAAGATTTGCGT+AGG + chr6_4:80713252-80713271 None:intergenic 35.0%
TACGCAAATCTTACTTCTGT+TGG - chr6_4:80713251-80713270 Msa0999050:CDS 35.0%
!!! CATGAGTTTTGGAGAAAAGT+GGG + chr6_4:80713418-80713437 None:intergenic 35.0%
! CACACAAAAACCATGAGTTT+TGG + chr6_4:80713429-80713448 None:intergenic 35.0%
TCACACGATGTGTAAATTCA+CGG + chr6_4:80713461-80713480 None:intergenic 35.0%
TCGTGTGAAATCAGTTTCAA+TGG - chr6_4:80713473-80713492 Msa0999050:intron 35.0%
CTTAAAAAAGTGAATCCTGG+AGG + chr6_4:80713902-80713921 None:intergenic 35.0%
AAGACGATTCCTATGAAAAC+AGG - chr6_4:80714054-80714073 Msa0999050:intron 35.0%
GATCAAGAAAGTAGGCAATA+TGG - chr6_4:80714182-80714201 Msa0999050:intron 35.0%
AATCTCCATCTGATACTCTA+CGG + chr6_4:80714265-80714284 None:intergenic 35.0%
ATCAGATGGAGATTATAAGG+TGG - chr6_4:80714271-80714290 Msa0999050:intron 35.0%
CCAAAATATCTCTAACAGGT+CGG + chr6_4:80714352-80714371 None:intergenic 35.0%
! CGACCTGTTAGAGATATTTT+GGG - chr6_4:80714350-80714369 Msa0999050:intron 35.0%
TCTCCCAAAATATCTCTAAC+AGG + chr6_4:80714356-80714375 None:intergenic 35.0%
GTAATACCTCTTAGGATAAG+TGG - chr6_4:80714380-80714399 Msa0999050:intron 35.0%
ATAGAATAGGCCATTATGAG+TGG + chr6_4:80714597-80714616 None:intergenic 35.0%
GAAACATCTCTAATGTCCAA+AGG + chr6_4:80714894-80714913 None:intergenic 35.0%
GATCGGCATCAAAATCAATA+AGG + chr6_4:80715208-80715227 None:intergenic 35.0%
AAATCCCAGTGATGACAATT+GGG - chr6_4:80715298-80715317 Msa0999050:intron 35.0%
!! TTCTTTTGATGTTGCTTCTG+AGG - chr6_4:80715322-80715341 Msa0999050:intron 35.0%
! GGATTTAAATTTGAGGTGCT+TGG + chr6_4:80715359-80715378 None:intergenic 35.0%
TTATTATGAGGTGATACGGA+TGG + chr6_4:80715589-80715608 None:intergenic 35.0%
TAAGTAGTCACGATTACTTC+AGG + chr6_4:80715976-80715995 None:intergenic 35.0%
ACTTGCATATGCCTATTGTT+TGG - chr6_4:80716027-80716046 Msa0999050:intron 35.0%
GGCTAACAATTAGTTGTGAT+TGG - chr6_4:80716048-80716067 Msa0999050:intron 35.0%
ATCTGGTAAGCTAATCATTC+TGG + chr6_4:80716191-80716210 None:intergenic 35.0%
AAACGCATACTAAGACAATC+TGG + chr6_4:80716208-80716227 None:intergenic 35.0%
AGATTGTCTTAGTATGCGTT+TGG - chr6_4:80716207-80716226 Msa0999050:intron 35.0%
!! AATGGATTTGTTGACCTTGA+CGG + chr6_4:80716429-80716448 None:intergenic 35.0%
TTGAAAGTCACATACACTTG+GGG + chr6_4:80716484-80716503 None:intergenic 35.0%
CATTGAAAGTCACATACACT+TGG + chr6_4:80716486-80716505 None:intergenic 35.0%
! TGTTCCAACCTTTTCAATGA+CGG + chr6_4:80716635-80716654 None:intergenic 35.0%
!! TGACCCTGAAAGTATTAACA+TGG + chr6_4:80717106-80717125 None:intergenic 35.0%
CAACTAATATACCAATGCCA+AGG - chr6_4:80717145-80717164 Msa0999050:intron 35.0%
AGAGAAATTTACCTTGGCAT+TGG + chr6_4:80717159-80717178 None:intergenic 35.0%
CTTCTTCGAAACTCGTATTT+GGG - chr6_4:80717237-80717256 Msa0999050:intron 35.0%
! AAGGTATTAACTCAATGTGC+AGG - chr6_4:80717463-80717482 Msa0999050:intron 35.0%
GTTTCGGTTTCTATTGTTTG+TGG - chr6_4:80717698-80717717 Msa0999050:exon 35.0%
AATGAAGGATTTGTGATGAC+CGG - chr6_4:80717740-80717759 Msa0999050:five_prime_UTR 35.0%
ACTGTTTATTCCTATAGGAG+GGG - chr6_4:80717799-80717818 Msa0999050:intron 35.0%
GATAGAGAGATTGAATGAAG+GGG - chr6_4:80717872-80717891 Msa0999050:intron 35.0%
ATAGAGAGATTGAATGAAGG+GGG - chr6_4:80717873-80717892 Msa0999050:intron 35.0%
!! TGAAGTTCTGGAAGGTTCTT+GGG + chr6_4:80709388-80709407 None:intergenic 40.0%
!! TTGAAGTTCTGGAAGGTTCT+TGG + chr6_4:80709389-80709408 None:intergenic 40.0%
ATGATGATTGGAATCGCGTT+TGG - chr6_4:80709636-80709655 Msa0999050:three_prime_UTR 40.0%
! CAAGAAGTTGCTGTTAGAGA+TGG - chr6_4:80709682-80709701 Msa0999050:three_prime_UTR 40.0%
! AGAAGTTGCTGTTAGAGATG+GGG - chr6_4:80709684-80709703 Msa0999050:three_prime_UTR 40.0%
GCACAGACACTTATGATTGA+AGG - chr6_4:80709957-80709976 Msa0999050:intron 40.0%
! TTATGATTGAAGGTGCATCC+TGG - chr6_4:80709967-80709986 Msa0999050:intron 40.0%
GTGACGTGTCTAATAATTGG+GGG + chr6_4:80710457-80710476 None:intergenic 40.0%
CGTGACGTGTCTAATAATTG+GGG + chr6_4:80710458-80710477 None:intergenic 40.0%
GCGTGACGTGTCTAATAATT+GGG + chr6_4:80710459-80710478 None:intergenic 40.0%
AATCTCGTCTCTGATTCTCT+AGG + chr6_4:80710975-80710994 None:intergenic 40.0%
GAATGCAGTGTTGTCAATTG+CGG - chr6_4:80711481-80711500 Msa0999050:CDS 40.0%
TGTTCAAATCCGCTATGCAA+CGG - chr6_4:80711523-80711542 Msa0999050:CDS 40.0%
TTGGTAAATAGCGGCTATAG+TGG + chr6_4:80711641-80711660 None:intergenic 40.0%
!! CGATCAGTGTTGGTAAATAG+CGG + chr6_4:80711650-80711669 None:intergenic 40.0%
CTAGCTAACTTGGTAGAATG+TGG - chr6_4:80711864-80711883 Msa0999050:CDS 40.0%
ACGGGAGCAATCATATCATA+CGG + chr6_4:80711893-80711912 None:intergenic 40.0%
TCGGTTTCACATTGCATGAA+CGG + chr6_4:80711912-80711931 None:intergenic 40.0%
AATGGTTGAACATTAGAGCG+TGG - chr6_4:80711951-80711970 Msa0999050:intron 40.0%
ATGGTTGAACATTAGAGCGT+GGG - chr6_4:80711952-80711971 Msa0999050:intron 40.0%
TCTATTCCCAAACGTGTCTA+TGG - chr6_4:80712141-80712160 Msa0999050:CDS 40.0%
TTAGTGGTTAGCAAGGTGAT+AGG - chr6_4:80712287-80712306 Msa0999050:intron 40.0%
AGTTGCCCACTACAAAAATG+AGG + chr6_4:80712324-80712343 None:intergenic 40.0%
!!! CATTTTTGTAGTGGGCAACT+TGG - chr6_4:80712324-80712343 Msa0999050:intron 40.0%
!!! TTTTTGTAGTGGGCAACTTG+GGG - chr6_4:80712326-80712345 Msa0999050:intron 40.0%
! TTATGGTAGTGTACAGGCTA+CGG + chr6_4:80712694-80712713 None:intergenic 40.0%
AATCTAGAGAATGGTGCAAC+AGG + chr6_4:80712744-80712763 None:intergenic 40.0%
CACCATTCTCTAGATTCCAT+TGG - chr6_4:80712748-80712767 Msa0999050:intron 40.0%
! ACATGTTTCAGAGTACTTGG+TGG - chr6_4:80713026-80713045 Msa0999050:CDS 40.0%
GTAATACTGCTGGATAAAGC+AGG + chr6_4:80713052-80713071 None:intergenic 40.0%
!!! CCATGAGTTTTGGAGAAAAG+TGG + chr6_4:80713419-80713438 None:intergenic 40.0%
!! CCACTTTTCTCCAAAACTCA+TGG - chr6_4:80713416-80713435 Msa0999050:intron 40.0%
ATTTCCTCCTTCTTGAAGTG+CGG + chr6_4:80713523-80713542 None:intergenic 40.0%
ACTTCAAGAAGGAGGAAATC+AGG - chr6_4:80713524-80713543 Msa0999050:intron 40.0%
!! TTGGTGCCAGTAATGTTAAC+AGG - chr6_4:80713780-80713799 Msa0999050:intron 40.0%
TATGAGGATAGGAGATTCAC+TGG - chr6_4:80713827-80713846 Msa0999050:intron 40.0%
ATAGGAGATTCACTGGAGAT+AGG - chr6_4:80713834-80713853 Msa0999050:intron 40.0%
AATCTTACGACCTTTCCTCT+CGG + chr6_4:80713875-80713894 None:intergenic 40.0%
! TCTTGTGTTGTGTGTTGTTC+AGG - chr6_4:80714025-80714044 Msa0999050:intron 40.0%
! CTTGTGTTGTGTGTTGTTCA+GGG - chr6_4:80714026-80714045 Msa0999050:intron 40.0%
! CTCAACTCTCCTGTTTTCAT+AGG + chr6_4:80714066-80714085 None:intergenic 40.0%
CTATGAAAACAGGAGAGTTG+AGG - chr6_4:80714064-80714083 Msa0999050:intron 40.0%
CTACTTTCTTGATCAGATCC+AGG + chr6_4:80714176-80714195 None:intergenic 40.0%
CTGGATCTGATCAAGAAAGT+AGG - chr6_4:80714174-80714193 Msa0999050:intron 40.0%
! CCGACCTGTTAGAGATATTT+TGG - chr6_4:80714349-80714368 Msa0999050:intron 40.0%
GTTCTAATACCGTGTCATGA+AGG + chr6_4:80714540-80714559 None:intergenic 40.0%
TCTGTCTTTGCCACTCATAA+TGG - chr6_4:80714584-80714603 Msa0999050:intron 40.0%
CAGCTTCGATCAAGAATACA+AGG + chr6_4:80714856-80714875 None:intergenic 40.0%
TTGAGGCACACTAGATTGTT+GGG + chr6_4:80715261-80715280 None:intergenic 40.0%
GAAATCCCAGTGATGACAAT+TGG - chr6_4:80715297-80715316 Msa0999050:intron 40.0%
TGGGACAAAACAGATTCAAG+CGG + chr6_4:80715380-80715399 None:intergenic 40.0%
AGAAGGTAAAGATTCCGACA+CGG + chr6_4:80715408-80715427 None:intergenic 40.0%
TCTTTACCTTCTCATACTCC+AGG - chr6_4:80715416-80715435 Msa0999050:intron 40.0%
! GACTCATCTGTTTTATCTGC+AGG - chr6_4:80715496-80715515 Msa0999050:intron 40.0%
GCTGAGAAATTGCCAAAACT+AGG + chr6_4:80715541-80715560 None:intergenic 40.0%
! ATTGTTGACTAGCAGAAGCA+GGG + chr6_4:80715654-80715673 None:intergenic 40.0%
! AATTGTTGACTAGCAGAAGC+AGG + chr6_4:80715655-80715674 None:intergenic 40.0%
GTGCTGTAAATAGTCAGGTT+TGG - chr6_4:80715692-80715711 Msa0999050:intron 40.0%
CTGTTAAAAGCCTCATTAGC+AGG + chr6_4:80715898-80715917 None:intergenic 40.0%
! GGTTTAACTTCTACAGCAGA+AGG + chr6_4:80715934-80715953 None:intergenic 40.0%
GCTGTAGAAGTTAAACCAAG+TGG - chr6_4:80715937-80715956 Msa0999050:intron 40.0%
CAATTAGTTGTGATTGGTGC+AGG - chr6_4:80716054-80716073 Msa0999050:intron 40.0%
TGTTTACTGCTGACATCGAA+TGG + chr6_4:80716447-80716466 None:intergenic 40.0%
! GTTCCAACCTTTTCAATGAC+GGG + chr6_4:80716634-80716653 None:intergenic 40.0%
! TGATGCATATGATGACGATG+GGG + chr6_4:80716998-80717017 None:intergenic 40.0%
! CTGATGCATATGATGACGAT+GGG + chr6_4:80716999-80717018 None:intergenic 40.0%
! ACTGATGCATATGATGACGA+TGG + chr6_4:80717000-80717019 None:intergenic 40.0%
ACAGGATAAACATACCTGGT+GGG + chr6_4:80717023-80717042 None:intergenic 40.0%
AACAGGATAAACATACCTGG+TGG + chr6_4:80717024-80717043 None:intergenic 40.0%
TAAGCTTAAACAGCATGCAC+AGG + chr6_4:80717204-80717223 None:intergenic 40.0%
GCTTCTTCGAAACTCGTATT+TGG - chr6_4:80717236-80717255 Msa0999050:intron 40.0%
TCATGCTATGCAGCATGTAT+GGG + chr6_4:80717283-80717302 None:intergenic 40.0%
TTCATGCTATGCAGCATGTA+TGG + chr6_4:80717284-80717303 None:intergenic 40.0%
ATTAACTCAATGTGCAGGCA+AGG - chr6_4:80717468-80717487 Msa0999050:intron 40.0%
CGGTTTCTATTGTTTGTGGA+TGG - chr6_4:80717702-80717721 Msa0999050:exon 40.0%
CTGTTTATTCCTATAGGAGG+GGG - chr6_4:80717800-80717819 Msa0999050:intron 40.0%
TTCTGAGTTGTGCTCTTTCA+TGG - chr6_4:80717998-80718017 Msa0999050:five_prime_UTR 40.0%
GGTGAAGAGTGAAAACGGAA+AGG + chr6_4:80709345-80709364 None:intergenic 45.0%
GGCGTGACGTGTCTAATAAT+TGG + chr6_4:80710460-80710479 None:intergenic 45.0%
TTGTGCAATAGCGGCTATAG+TGG + chr6_4:80711559-80711578 None:intergenic 45.0%
CGGTTTCACATTGCATGAAC+GGG + chr6_4:80711911-80711930 None:intergenic 45.0%
TGGTTGAACATTAGAGCGTG+GGG - chr6_4:80711953-80711972 Msa0999050:intron 45.0%
AAGTAGTTCACTGGGGTAAG+TGG - chr6_4:80712105-80712124 Msa0999050:CDS 45.0%
CATTCGGTTAGTGGTTAGCA+AGG - chr6_4:80712280-80712299 Msa0999050:intron 45.0%
! TAAGGTCATTGGGGTGTTTG+AGG - chr6_4:80712553-80712572 Msa0999050:intron 45.0%
CATGTGCAAACTGCCAAGTA+TGG + chr6_4:80713108-80713127 None:intergenic 45.0%
AGTTTGCACATGTCTTGCTG+AGG - chr6_4:80713116-80713135 Msa0999050:CDS 45.0%
GAGAAAAGTGGGCAGTTGAA+AGG + chr6_4:80713407-80713426 None:intergenic 45.0%
GAAGTTACCGCACTTCAAGA+AGG - chr6_4:80713513-80713532 Msa0999050:intron 45.0%
!! GGCACGAGTTTTAGCACAAA+AGG + chr6_4:80713558-80713577 None:intergenic 45.0%
CAAGTACTTACCTGCTGTCA+GGG + chr6_4:80713701-80713720 None:intergenic 45.0%
TCGGAGCCTGTTAACATTAC+TGG + chr6_4:80713789-80713808 None:intergenic 45.0%
! GTCGTAAGATTTTACCCTCC+AGG - chr6_4:80713884-80713903 Msa0999050:CDS 45.0%
AGGAGAGTTGAGGCATATCA+GGG - chr6_4:80714074-80714093 Msa0999050:intron 45.0%
GGCGATTATAAGAGAAGTCC+CGG - chr6_4:80714203-80714222 Msa0999050:intron 45.0%
GTCCTCCAGTTGTCAATGAT+TGG - chr6_4:80714228-80714247 Msa0999050:intron 45.0%
! GAAGACCGTAGAGTATCAGA+TGG - chr6_4:80714257-80714276 Msa0999050:intron 45.0%
!!! TTTTCCGCTGTTTGGTTTGG+GGG + chr6_4:80714408-80714427 None:intergenic 45.0%
!!! CTTTTCCGCTGTTTGGTTTG+GGG + chr6_4:80714409-80714428 None:intergenic 45.0%
!! GCTTTTCCGCTGTTTGGTTT+GGG + chr6_4:80714410-80714429 None:intergenic 45.0%
! AGCTTTTCCGCTGTTTGGTT+TGG + chr6_4:80714411-80714430 None:intergenic 45.0%
CTGTGTCAGTGATGAAGCAT+CGG + chr6_4:80714435-80714454 None:intergenic 45.0%
TGTGTTCAGCCTTCATGACA+CGG - chr6_4:80714528-80714547 Msa0999050:intron 45.0%
! CTCTCTCAAGAAGAGCATGT+CGG + chr6_4:80714675-80714694 None:intergenic 45.0%
AACTCAGCCACCTCACTAAA+GGG + chr6_4:80715062-80715081 None:intergenic 45.0%
TTTCAGAGAACTGCATCCTC+TGG - chr6_4:80715125-80715144 Msa0999050:intron 45.0%
! CTCTACTTGGCTTTCGTTAC+TGG + chr6_4:80715162-80715181 None:intergenic 45.0%
ACACTAGATTGTTGGGCTTG+AGG + chr6_4:80715254-80715273 None:intergenic 45.0%
GTTGAGGCACACTAGATTGT+TGG + chr6_4:80715262-80715281 None:intergenic 45.0%
GGATTTCCTGACTGCAAAAC+AGG + chr6_4:80715284-80715303 None:intergenic 45.0%
GAAGCCCAATTGTCATCACT+GGG + chr6_4:80715305-80715324 None:intergenic 45.0%
AGAAGCCCAATTGTCATCAC+TGG + chr6_4:80715306-80715325 None:intergenic 45.0%
TTTGTCCCAATTGTCCGTGT+CGG - chr6_4:80715391-80715410 Msa0999050:intron 45.0%
AGATTCCGACACGGACAATT+GGG + chr6_4:80715399-80715418 None:intergenic 45.0%
AAGATTCCGACACGGACAAT+TGG + chr6_4:80715400-80715419 None:intergenic 45.0%
ACTATTTACAGCACCACCCA+CGG + chr6_4:80715686-80715705 None:intergenic 45.0%
TGATGGTATGCATGTGGCAT+TGG + chr6_4:80715865-80715884 None:intergenic 45.0%
GGAAGTTCTGTTCTTCCACT+TGG + chr6_4:80715955-80715974 None:intergenic 45.0%
TACTTTCCTGCTCCAGTTCA+AGG - chr6_4:80716100-80716119 Msa0999050:intron 45.0%
TCCAGTTCAAGGTTGGCAAA+TGG - chr6_4:80716111-80716130 Msa0999050:intron 45.0%
CCAGTTCAAGGTTGGCAAAT+GGG - chr6_4:80716112-80716131 Msa0999050:intron 45.0%
TATTGCATTGGAAAGCCCTG+CGG + chr6_4:80716142-80716161 None:intergenic 45.0%
CTTGACGGCTGTGAATAACT+TGG + chr6_4:80716414-80716433 None:intergenic 45.0%
CAAGTTATTCACAGCCGTCA+AGG - chr6_4:80716412-80716431 Msa0999050:intron 45.0%
ATACACTTGGGGCTTGATGT+GGG + chr6_4:80716473-80716492 None:intergenic 45.0%
ATGCTCTCCCGTCATTGAAA+AGG - chr6_4:80716624-80716643 Msa0999050:intron 45.0%
TCTCCCGTCATTGAAAAGGT+TGG - chr6_4:80716628-80716647 Msa0999050:intron 45.0%
ATGCATGCAATGAACTGCTC+TGG + chr6_4:80716804-80716823 None:intergenic 45.0%
AGAGCAGTTCATTGCATGCA+TGG - chr6_4:80716803-80716822 Msa0999050:intron 45.0%
ATTAGGCAGGGAACCTTGAA+AGG + chr6_4:80716911-80716930 None:intergenic 45.0%
TGAAGGTGGTACATTAGGCA+GGG + chr6_4:80716923-80716942 None:intergenic 45.0%
ATGCCTGAAGGTGGTACATT+AGG + chr6_4:80716928-80716947 None:intergenic 45.0%
ATACTTTCAGGGTCATACGC+TGG - chr6_4:80717111-80717130 Msa0999050:intron 45.0%
TACTTTCAGGGTCATACGCT+GGG - chr6_4:80717112-80717131 Msa0999050:intron 45.0%
AGGCAAGGAGTTGGGAATTT+CGG - chr6_4:80717483-80717502 Msa0999050:intron 45.0%
AGTTGGGAATTTCGGAACTG+AGG - chr6_4:80717491-80717510 Msa0999050:intron 45.0%
GTTGGGAATTTCGGAACTGA+GGG - chr6_4:80717492-80717511 Msa0999050:intron 45.0%
GGAACTGAGGGAAACATGTT+CGG - chr6_4:80717504-80717523 Msa0999050:intron 45.0%
TGTTTGTACACGGTGCAACA+TGG + chr6_4:80717671-80717690 None:intergenic 45.0%
ATATTGTCTCCCCCTCCTAT+AGG + chr6_4:80717812-80717831 None:intergenic 45.0%
TCTTCGATAAGGGGAGTTTG+AGG - chr6_4:80717836-80717855 Msa0999050:intron 45.0%
!!! TTTTATATTACATTTTAAAA+TGG + chr6_4:80714492-80714511 None:intergenic 5.0%
TGCTGTTAGAGATGGGGACT+CGG - chr6_4:80709690-80709709 Msa0999050:three_prime_UTR 50.0%
!! GTAATCACAGGTGTCGGTGT+TGG + chr6_4:80710012-80710031 None:intergenic 50.0%
GCTATAGCACCGTTGCATAG+CGG + chr6_4:80711535-80711554 None:intergenic 50.0%
TGAACATTAGAGCGTGGGGT+TGG - chr6_4:80711957-80711976 Msa0999050:intron 50.0%
AGAATGGTGCAACAGGTGCT+AGG + chr6_4:80712737-80712756 None:intergenic 50.0%
GTTACCGCACTTCAAGAAGG+AGG - chr6_4:80713516-80713535 Msa0999050:intron 50.0%
GCAATTCTTTCCCTGACAGC+AGG - chr6_4:80713688-80713707 Msa0999050:intron 50.0%
GCAAGTACTTACCTGCTGTC+AGG + chr6_4:80713702-80713721 None:intergenic 50.0%
TGACAAACCACCGAGAGGAA+AGG - chr6_4:80713862-80713881 Msa0999050:intron 50.0%
CAGGAGAGTTGAGGCATATC+AGG - chr6_4:80714073-80714092 Msa0999050:intron 50.0%
AGAGTTGAGGCATATCAGGG+AGG - chr6_4:80714077-80714096 Msa0999050:intron 50.0%
CCTGTGTGTCTTCGTATGGA+GGG + chr6_4:80714112-80714131 None:intergenic 50.0%
TCCTGTGTGTCTTCGTATGG+AGG + chr6_4:80714113-80714132 None:intergenic 50.0%
CGTTCCTGTGTGTCTTCGTA+TGG + chr6_4:80714116-80714135 None:intergenic 50.0%
GACACACAGGAACGTCGTTA+TGG - chr6_4:80714122-80714141 Msa0999050:intron 50.0%
AGGAACGTCGTTATGGTGAC+AGG - chr6_4:80714129-80714148 Msa0999050:intron 50.0%
TATGGTGACAGGTCTAGTCC+AGG - chr6_4:80714140-80714159 Msa0999050:intron 50.0%
ATTGACAACTGGAGGACGAC+CGG + chr6_4:80714225-80714244 None:intergenic 50.0%
CGCCAATCATTGACAACTGG+AGG + chr6_4:80714233-80714252 None:intergenic 50.0%
CGACGCCAATCATTGACAAC+TGG + chr6_4:80714236-80714255 None:intergenic 50.0%
ATCTCTAACAGGTCGGACCA+CGG + chr6_4:80714345-80714364 None:intergenic 50.0%
!! TTTCCGCTGTTTGGTTTGGG+GGG + chr6_4:80714407-80714426 None:intergenic 50.0%
CGATGCTTCATCACTGACAC+AGG - chr6_4:80714433-80714452 Msa0999050:intron 50.0%
! AGCATGTCGGCATTGAAGCA+TGG + chr6_4:80714662-80714681 None:intergenic 50.0%
TCTCATCTCCCCCTTTAGTG+AGG - chr6_4:80715049-80715068 Msa0999050:intron 50.0%
ACTCAGCCACCTCACTAAAG+GGG + chr6_4:80715061-80715080 None:intergenic 50.0%
CAACTCAGCCACCTCACTAA+AGG + chr6_4:80715063-80715082 None:intergenic 50.0%
TGGAGCAACAGGTTCAGGAT+CGG + chr6_4:80715225-80715244 None:intergenic 50.0%
ACTGTTGGAGCAACAGGTTC+AGG + chr6_4:80715230-80715249 None:intergenic 50.0%
TGAGGAACTGTTGGAGCAAC+AGG + chr6_4:80715236-80715255 None:intergenic 50.0%
TGTTGGGCTTGAGGAACTGT+TGG + chr6_4:80715245-80715264 None:intergenic 50.0%
CCTGACTGCAAAACAGGTTG+AGG + chr6_4:80715278-80715297 None:intergenic 50.0%
! CCTCAACCTGTTTTGCAGTC+AGG - chr6_4:80715275-80715294 Msa0999050:intron 50.0%
TGGACTCCTGGAGTATGAGA+AGG + chr6_4:80715425-80715444 None:intergenic 50.0%
TCTCATACTCCAGGAGTCCA+AGG - chr6_4:80715425-80715444 Msa0999050:intron 50.0%
TGTGTATCACCTTGGACTCC+TGG + chr6_4:80715437-80715456 None:intergenic 50.0%
TCAACAATTTCCACCGTCCG+TGG - chr6_4:80715666-80715685 Msa0999050:intron 50.0%
CAACAATTTCCACCGTCCGT+GGG - chr6_4:80715667-80715686 Msa0999050:intron 50.0%
!! GGGTGGTGCTGTAAATAGTC+AGG - chr6_4:80715687-80715706 Msa0999050:intron 50.0%
! GGTACAGAAGGTGCATGCAA+TGG + chr6_4:80715817-80715836 None:intergenic 50.0%
!! GCATGTGGCATTGGTGCATT+CGG + chr6_4:80715856-80715875 None:intergenic 50.0%
GAGGCATGATGGTATGCATG+TGG + chr6_4:80715871-80715890 None:intergenic 50.0%
!! TAGCAGGCTTTGAGGCATGA+TGG + chr6_4:80715882-80715901 None:intergenic 50.0%
TGCCTCAAAGCCTGCTAATG+AGG - chr6_4:80715885-80715904 Msa0999050:intron 50.0%
AGCCTCATTAGCAGGCTTTG+AGG + chr6_4:80715890-80715909 None:intergenic 50.0%
! GAACTGGAGCAGGAAAGTAC+TGG + chr6_4:80716099-80716118 None:intergenic 50.0%
TTCCTGCTCCAGTTCAAGGT+TGG - chr6_4:80716104-80716123 Msa0999050:intron 50.0%
CCCATTTGCCAACCTTGAAC+TGG + chr6_4:80716115-80716134 None:intergenic 50.0%
GGCTGTGAATAACTTGGCAC+AGG + chr6_4:80716408-80716427 None:intergenic 50.0%
TACACTTGGGGCTTGATGTG+GGG + chr6_4:80716472-80716491 None:intergenic 50.0%
CATACACTTGGGGCTTGATG+TGG + chr6_4:80716474-80716493 None:intergenic 50.0%
CCTTCCATGTCTTCCTTGCA+CGG - chr6_4:80716733-80716752 Msa0999050:intron 50.0%
!! GGGAGTGATGGTGGTACATT+AGG + chr6_4:80716766-80716785 None:intergenic 50.0%
!! ATGAACTGCTCTGGCTTGGA+GGG + chr6_4:80716795-80716814 None:intergenic 50.0%
!! AATGAACTGCTCTGGCTTGG+AGG + chr6_4:80716796-80716815 None:intergenic 50.0%
TGCAATGAACTGCTCTGGCT+TGG + chr6_4:80716799-80716818 None:intergenic 50.0%
TGAAGACTGCACGGTTCCTA+CGG + chr6_4:80716845-80716864 None:intergenic 50.0%
!! TGCATGTGGTGGATAACCCA+GGG + chr6_4:80716869-80716888 None:intergenic 50.0%
!! ATGCATGTGGTGGATAACCC+AGG + chr6_4:80716870-80716889 None:intergenic 50.0%
TGGGTTATCCACCACATGCA+TGG - chr6_4:80716869-80716888 Msa0999050:intron 50.0%
GAACCTTGAAAGGATGGCAG+GGG + chr6_4:80716901-80716920 None:intergenic 50.0%
GGAACCTTGAAAGGATGGCA+GGG + chr6_4:80716902-80716921 None:intergenic 50.0%
CTGAAGGTGGTACATTAGGC+AGG + chr6_4:80716924-80716943 None:intergenic 50.0%
CTGCCTAATGTACCACCTTC+AGG - chr6_4:80716922-80716941 Msa0999050:intron 50.0%
! ATGGATTGCCTAGGTTCGGA+GGG + chr6_4:80716957-80716976 None:intergenic 50.0%
!! TGGGATGGATTGCCTAGGTT+CGG + chr6_4:80716961-80716980 None:intergenic 50.0%
! GCATATGATGACGATGGGGT+TGG + chr6_4:80716994-80717013 None:intergenic 50.0%
TCATATGCATCAGTCCCACC+AGG - chr6_4:80717006-80717025 Msa0999050:intron 50.0%
TCAATGTGCAGGCAAGGAGT+TGG - chr6_4:80717474-80717493 Msa0999050:intron 50.0%
CAATGTGCAGGCAAGGAGTT+GGG - chr6_4:80717475-80717494 Msa0999050:intron 50.0%
! CTATCAGGCAGCTGCTGATT+TGG + chr6_4:80717540-80717559 None:intergenic 50.0%
CAAATCAGCAGCTGCCTGAT+AGG - chr6_4:80717538-80717557 Msa0999050:intron 50.0%
! CGAATGGATTCCCTCCTTTG+GGG + chr6_4:80717593-80717612 None:intergenic 50.0%
! CCGAATGGATTCCCTCCTTT+GGG + chr6_4:80717594-80717613 None:intergenic 50.0%
CCCAAAGGAGGGAATCCATT+CGG - chr6_4:80717591-80717610 Msa0999050:intron 50.0%
CCAAAGGAGGGAATCCATTC+GGG - chr6_4:80717592-80717611 Msa0999050:intron 50.0%
! GATTTGTGATGACCGGCTCT+GGG - chr6_4:80717747-80717766 Msa0999050:five_prime_UTR 50.0%
! TTTTCACTTCGACCCAGAGC+CGG + chr6_4:80717762-80717781 None:intergenic 50.0%
TCTTACGAGCGTGCGATTCG+AGG - chr6_4:80710276-80710295 Msa0999050:intron 55.0%
GTGGGCAACTTGGGGCTTAT+CGG - chr6_4:80712334-80712353 Msa0999050:intron 55.0%
ACCTCTGACAAACCACCGAG+AGG - chr6_4:80713857-80713876 Msa0999050:intron 55.0%
! TCCTCTCGGTGGTTTGTCAG+AGG + chr6_4:80713861-80713880 None:intergenic 55.0%
CTTACGACCTTTCCTCTCGG+TGG + chr6_4:80713872-80713891 None:intergenic 55.0%
CCCTCCATACGAAGACACAC+AGG - chr6_4:80714109-80714128 Msa0999050:intron 55.0%
AGTCCAGGTGGAAGAAGTCC+TGG - chr6_4:80714155-80714174 Msa0999050:intron 55.0%
GATCCAGGACTTCTTCCACC+TGG + chr6_4:80714161-80714180 None:intergenic 55.0%
TTGACAACTGGAGGACGACC+GGG + chr6_4:80714224-80714243 None:intergenic 55.0%
TCTCTAACAGGTCGGACCAC+GGG + chr6_4:80714344-80714363 None:intergenic 55.0%
GGGGGTCCACTTATCCTAAG+AGG + chr6_4:80714389-80714408 None:intergenic 55.0%
! TCGGCAGCTTTTCCGCTGTT+TGG + chr6_4:80714416-80714435 None:intergenic 55.0%
CATCTCCCCCTTTAGTGAGG+TGG - chr6_4:80715052-80715071 Msa0999050:intron 55.0%
CTCAGCCACCTCACTAAAGG+GGG + chr6_4:80715060-80715079 None:intergenic 55.0%
AACTGCATCCTCTGGCAGCT+TGG - chr6_4:80715133-80715152 Msa0999050:intron 55.0%
ACTGGATACCAAGCTGCCAG+AGG + chr6_4:80715144-80715163 None:intergenic 55.0%
CTAGGAGCTGCTGCTGGAAT+AGG + chr6_4:80715523-80715542 None:intergenic 55.0%
CCAAAACTAGGAGCTGCTGC+TGG + chr6_4:80715529-80715548 None:intergenic 55.0%
! CCAGCAGCAGCTCCTAGTTT+TGG - chr6_4:80715526-80715545 Msa0999050:intron 55.0%
TTCTCAGCTTTCCCACCCAG+TGG - chr6_4:80715553-80715572 Msa0999050:intron 55.0%
! GATGGCACTGAAGTGCCACT+GGG + chr6_4:80715571-80715590 None:intergenic 55.0%
TGGTTGCGGATGCTGCAAAC+TGG + chr6_4:80715626-80715645 None:intergenic 55.0%
! GAAGCAGGGAACGTTGGTTG+CGG + chr6_4:80715640-80715659 None:intergenic 55.0%
CTAGCAGAAGCAGGGAACGT+TGG + chr6_4:80715646-80715665 None:intergenic 55.0%
TTTACAGCACCACCCACGGA+CGG + chr6_4:80715682-80715701 None:intergenic 55.0%
CATGCACCTTCTGTACCCAC+AGG - chr6_4:80715820-80715839 Msa0999050:intron 55.0%
ACCTTCTGTACCCACAGGAC+AGG - chr6_4:80715825-80715844 Msa0999050:intron 55.0%
CCTTCTGTACCCACAGGACA+GGG - chr6_4:80715826-80715845 Msa0999050:intron 55.0%
CTTCTGTACCCACAGGACAG+GGG - chr6_4:80715827-80715846 Msa0999050:intron 55.0%
TGCCAACCTTGAACTGGAGC+AGG + chr6_4:80716109-80716128 None:intergenic 55.0%
CCGTGCAAGGAAGACATGGA+AGG + chr6_4:80716736-80716755 None:intergenic 55.0%
ATTAGGCAACGCACCGTGCA+AGG + chr6_4:80716749-80716768 None:intergenic 55.0%
!! TCTGGCTTGGAGGGTGCATT+GGG + chr6_4:80716786-80716805 None:intergenic 55.0%
AATCCACCACTGCCTACCGT+AGG - chr6_4:80716826-80716845 Msa0999050:intron 55.0%
AACCGTGCAGTCTTCAACCC+TGG - chr6_4:80716849-80716868 Msa0999050:intron 55.0%
ACCGTGCAGTCTTCAACCCT+GGG - chr6_4:80716850-80716869 Msa0999050:intron 55.0%
ACCCAGGGTTGAAGACTGCA+CGG + chr6_4:80716854-80716873 None:intergenic 55.0%
GGGAACCTTGAAAGGATGGC+AGG + chr6_4:80716903-80716922 None:intergenic 55.0%
GGCAGGGAACCTTGAAAGGA+TGG + chr6_4:80716907-80716926 None:intergenic 55.0%
ATTACGCACCCTCCGAACCT+AGG - chr6_4:80716946-80716965 Msa0999050:intron 55.0%
!! GATGGATTGCCTAGGTTCGG+AGG + chr6_4:80716958-80716977 None:intergenic 55.0%
!! AGGCATGGGATGGATTGCCT+AGG + chr6_4:80716966-80716985 None:intergenic 55.0%
TAGGCAATCCATCCCATGCC+TGG - chr6_4:80716965-80716984 Msa0999050:intron 55.0%
GTCATACGCTGGGCAGCAAA+TGG - chr6_4:80717122-80717141 Msa0999050:intron 55.0%
TTAGAGCTGGGAGTGGTTCC+CGG + chr6_4:80717564-80717583 None:intergenic 55.0%
TTGGGGAAGGGGTTAGAGCT+GGG + chr6_4:80717576-80717595 None:intergenic 55.0%
TTTGGGGAAGGGGTTAGAGC+TGG + chr6_4:80717577-80717596 None:intergenic 55.0%
! AGCTCTAACCCCTTCCCCAA+AGG - chr6_4:80717576-80717595 Msa0999050:intron 55.0%
TCTAACCCCTTCCCCAAAGG+AGG - chr6_4:80717579-80717598 Msa0999050:intron 55.0%
CTAACCCCTTCCCCAAAGGA+GGG - chr6_4:80717580-80717599 Msa0999050:intron 55.0%
! GATTCCCTCCTTTGGGGAAG+GGG + chr6_4:80717587-80717606 None:intergenic 55.0%
! GGATTCCCTCCTTTGGGGAA+GGG + chr6_4:80717588-80717607 None:intergenic 55.0%
! TGGATTCCCTCCTTTGGGGA+AGG + chr6_4:80717589-80717608 None:intergenic 55.0%
! CCCGAATGGATTCCCTCCTT+TGG + chr6_4:80717595-80717614 None:intergenic 55.0%
! GGATTTGTGATGACCGGCTC+TGG - chr6_4:80717746-80717765 Msa0999050:five_prime_UTR 55.0%
GGTGCATCCTGGTGTCTGAC+AGG - chr6_4:80709978-80709997 Msa0999050:intron 60.0%
CACGACACCTGTCAGACACC+AGG + chr6_4:80709988-80710007 None:intergenic 60.0%
GGTGACAGGTCTAGTCCAGG+TGG - chr6_4:80714143-80714162 Msa0999050:intron 60.0%
TCCCGAACGAGCTAGAGACC+TGG - chr6_4:80714304-80714323 Msa0999050:intron 60.0%
! CCCAGGTCTCTAGCTCGTTC+GGG + chr6_4:80714308-80714327 None:intergenic 60.0%
CCCGAACGAGCTAGAGACCT+GGG - chr6_4:80714305-80714324 Msa0999050:intron 60.0%
! GCCCAGGTCTCTAGCTCGTT+CGG + chr6_4:80714309-80714328 None:intergenic 60.0%
TAACAGGTCGGACCACGGGT+GGG + chr6_4:80714340-80714359 None:intergenic 60.0%
GGACCCCCCAAACCAAACAG+CGG - chr6_4:80714401-80714420 Msa0999050:intron 60.0%
! GCACTGAAGTGCCACTGGGT+GGG + chr6_4:80715567-80715586 None:intergenic 60.0%
! GGATGGCACTGAAGTGCCAC+TGG + chr6_4:80715572-80715591 None:intergenic 60.0%
CAATTTCCACCGTCCGTGGG+TGG - chr6_4:80715670-80715689 Msa0999050:intron 60.0%
CCCTGTCCTGTGGGTACAGA+AGG + chr6_4:80715829-80715848 None:intergenic 60.0%
TTCGGATGCCCCTGTCCTGT+GGG + chr6_4:80715838-80715857 None:intergenic 60.0%
ATTCGGATGCCCCTGTCCTG+TGG + chr6_4:80715839-80715858 None:intergenic 60.0%
TTGGCAAATGGGTCCTCCGC+AGG - chr6_4:80716123-80716142 Msa0999050:intron 60.0%
TGGCAAATGGGTCCTCCGCA+GGG - chr6_4:80716124-80716143 Msa0999050:intron 60.0%
TGCATTGGAAAGCCCTGCGG+AGG + chr6_4:80716139-80716158 None:intergenic 60.0%
CGCACCGTGCAAGGAAGACA+TGG + chr6_4:80716740-80716759 None:intergenic 60.0%
GGGTGCATTGGGAGTGATGG+TGG + chr6_4:80716775-80716794 None:intergenic 60.0%
! GGAGGGTGCATTGGGAGTGA+TGG + chr6_4:80716778-80716797 None:intergenic 60.0%
!! CTCTGGCTTGGAGGGTGCAT+TGG + chr6_4:80716787-80716806 None:intergenic 60.0%
GTTCCTACGGTAGGCAGTGG+TGG + chr6_4:80716832-80716851 None:intergenic 60.0%
ACGGTTCCTACGGTAGGCAG+TGG + chr6_4:80716835-80716854 None:intergenic 60.0%
GACTGCACGGTTCCTACGGT+AGG + chr6_4:80716841-80716860 None:intergenic 60.0%
GGTGGAGTCCATGCATGTGG+TGG + chr6_4:80716880-80716899 None:intergenic 60.0%
AGGGGTGGAGTCCATGCATG+TGG + chr6_4:80716883-80716902 None:intergenic 60.0%
CCTTGAAAGGATGGCAGGGG+TGG + chr6_4:80716898-80716917 None:intergenic 60.0%
CCACCCCTGCCATCCTTTCA+AGG - chr6_4:80716895-80716914 Msa0999050:intron 60.0%
GGGTGCGTAATGCCTGAAGG+TGG + chr6_4:80716937-80716956 None:intergenic 60.0%
! GGAGGGTGCGTAATGCCTGA+AGG + chr6_4:80716940-80716959 None:intergenic 60.0%
GTTGGAGTCCAGGCATGGGA+TGG + chr6_4:80716976-80716995 None:intergenic 60.0%
TGGGGTTGGAGTCCAGGCAT+GGG + chr6_4:80716980-80716999 None:intergenic 60.0%
ATGGGGTTGGAGTCCAGGCA+TGG + chr6_4:80716981-80717000 None:intergenic 60.0%
TGACGATGGGGTTGGAGTCC+AGG + chr6_4:80716986-80717005 None:intergenic 60.0%
TCAGCAGCTGCCTGATAGGC+CGG - chr6_4:80717542-80717561 Msa0999050:intron 60.0%
GAAGGGGTTAGAGCTGGGAG+TGG + chr6_4:80717571-80717590 None:intergenic 60.0%
CTAACAGGTCGGACCACGGG+TGG + chr6_4:80714341-80714360 None:intergenic 65.0%
! GGCACTGAAGTGCCACTGGG+TGG + chr6_4:80715568-80715587 None:intergenic 65.0%
CAGCAGCTGCCTGATAGGCC+GGG - chr6_4:80717543-80717562 Msa0999050:intron 65.0%
GGAGTGGTTCCCGGCCTATC+AGG + chr6_4:80717555-80717574 None:intergenic 65.0%
! CGGGTGGGCTTGAAGAGCCC+AGG + chr6_4:80714325-80714344 None:intergenic 70.0%
GGGCTCTTCAAGCCCACCCG+TGG - chr6_4:80714325-80714344 Msa0999050:intron 70.0%
ACAGCACCACCCACGGACGG+TGG + chr6_4:80715679-80715698 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 80709280 80718133 80709280 ID=Msa0999050;Name=Msa0999050
chr6_4 mRNA 80709280 80718133 80709280 ID=Msa0999050-mRNA-1;Parent=Msa0999050;Name=Msa0999050-mRNA-1;_AED=0.06;_eAED=0.06;_QI=269|0.92|0.93|1|0.85|0.8|15|516|715
chr6_4 exon 80709280 80709928 80709280 ID=Msa0999050-mRNA-1:exon:15366;Parent=Msa0999050-mRNA-1
chr6_4 exon 80710247 80710292 80710247 ID=Msa0999050-mRNA-1:exon:15365;Parent=Msa0999050-mRNA-1
chr6_4 exon 80710386 80710683 80710386 ID=Msa0999050-mRNA-1:exon:15364;Parent=Msa0999050-mRNA-1
chr6_4 exon 80710925 80711008 80710925 ID=Msa0999050-mRNA-1:exon:15363;Parent=Msa0999050-mRNA-1
chr6_4 exon 80711239 80711337 80711239 ID=Msa0999050-mRNA-1:exon:15362;Parent=Msa0999050-mRNA-1
chr6_4 exon 80711435 80711599 80711435 ID=Msa0999050-mRNA-1:exon:15361;Parent=Msa0999050-mRNA-1
chr6_4 exon 80711705 80711895 80711705 ID=Msa0999050-mRNA-1:exon:15360;Parent=Msa0999050-mRNA-1
chr6_4 exon 80711967 80712282 80711967 ID=Msa0999050-mRNA-1:exon:15359;Parent=Msa0999050-mRNA-1
chr6_4 exon 80712959 80713366 80712959 ID=Msa0999050-mRNA-1:exon:15358;Parent=Msa0999050-mRNA-1
chr6_4 exon 80713527 80713623 80713527 ID=Msa0999050-mRNA-1:exon:15357;Parent=Msa0999050-mRNA-1
chr6_4 exon 80713704 80713765 80713704 ID=Msa0999050-mRNA-1:exon:15356;Parent=Msa0999050-mRNA-1
chr6_4 exon 80713868 80713955 80713868 ID=Msa0999050-mRNA-1:exon:15355;Parent=Msa0999050-mRNA-1
chr6_4 exon 80714459 80714520 80714459 ID=Msa0999050-mRNA-1:exon:15354;Parent=Msa0999050-mRNA-1
chr6_4 exon 80717614 80717816 80717614 ID=Msa0999050-mRNA-1:exon:15353;Parent=Msa0999050-mRNA-1
chr6_4 exon 80717969 80718133 80717969 ID=Msa0999050-mRNA-1:exon:15352;Parent=Msa0999050-mRNA-1
chr6_4 five_prime_UTR 80717969 80718133 80717969 ID=Msa0999050-mRNA-1:five_prime_utr;Parent=Msa0999050-mRNA-1
chr6_4 five_prime_UTR 80717713 80717816 80717713 ID=Msa0999050-mRNA-1:five_prime_utr;Parent=Msa0999050-mRNA-1
chr6_4 CDS 80717614 80717712 80717614 ID=Msa0999050-mRNA-1:cds;Parent=Msa0999050-mRNA-1
chr6_4 CDS 80714459 80714520 80714459 ID=Msa0999050-mRNA-1:cds;Parent=Msa0999050-mRNA-1
chr6_4 CDS 80713868 80713955 80713868 ID=Msa0999050-mRNA-1:cds;Parent=Msa0999050-mRNA-1
chr6_4 CDS 80713704 80713765 80713704 ID=Msa0999050-mRNA-1:cds;Parent=Msa0999050-mRNA-1
chr6_4 CDS 80713527 80713623 80713527 ID=Msa0999050-mRNA-1:cds;Parent=Msa0999050-mRNA-1
chr6_4 CDS 80712959 80713366 80712959 ID=Msa0999050-mRNA-1:cds;Parent=Msa0999050-mRNA-1
chr6_4 CDS 80711967 80712282 80711967 ID=Msa0999050-mRNA-1:cds;Parent=Msa0999050-mRNA-1
chr6_4 CDS 80711705 80711895 80711705 ID=Msa0999050-mRNA-1:cds;Parent=Msa0999050-mRNA-1
chr6_4 CDS 80711435 80711599 80711435 ID=Msa0999050-mRNA-1:cds;Parent=Msa0999050-mRNA-1
chr6_4 CDS 80711239 80711337 80711239 ID=Msa0999050-mRNA-1:cds;Parent=Msa0999050-mRNA-1
chr6_4 CDS 80710925 80711008 80710925 ID=Msa0999050-mRNA-1:cds;Parent=Msa0999050-mRNA-1
chr6_4 CDS 80710386 80710683 80710386 ID=Msa0999050-mRNA-1:cds;Parent=Msa0999050-mRNA-1
chr6_4 CDS 80710247 80710292 80710247 ID=Msa0999050-mRNA-1:cds;Parent=Msa0999050-mRNA-1
chr6_4 CDS 80709796 80709928 80709796 ID=Msa0999050-mRNA-1:cds;Parent=Msa0999050-mRNA-1
chr6_4 three_prime_UTR 80709280 80709795 80709280 ID=Msa0999050-mRNA-1:three_prime_utr;Parent=Msa0999050-mRNA-1
Gene Sequence

>Msa0999050

ATGGGGACTCGGTTTAAAGAAGATGAGAGAAACGAACGCTCGATTCGAACTCTTTTAAAGCTTGAACCGAATCGGAGATGTATTAACTGTAATAGTTTGGGACCACAATATGTGTGCACAAATTTCTGGACGTTTGTTTGCACTAATTGTAGTGGAATACACCGTGAATTTACACATCGTGTGAAATCAGTTTCAATGGCTAAATTTACTTCACAAGAAGTTACCGCACTTCAAGAAGGAGGAAATCAGCGTGCAAAAGAGATTTATTTTAAAGAATGGGATGCACAACGCAATTCTTTCCCTGACAGCAGTAATGTTAACAGGCTCCGAGAGTTTGTTAAGCATGTTTATGAGGATAGGAGATTCACTGGAGATAGGACCTCTGACAAACCACCGAGAGGAAAGGTCGGTGACAAAGACGATTCCTATGAAAACAGGAGAGTTGAGGCATATCAGGGAGGATCTAAAAGCCCTCCATACGAAGACACACAGGAACGTCGTTATGGTGACAGGTCTAGTCCAGGTGGAAGAAGTCCTGGATCTGATCAAGAAAGTAGGCAATATGGCGATTATAAGAGAAGTCCCGGTCGTCCTCCAGTTGTCAATGATTGGCGTCGTGAAGACCGTAGAGTATCAGATGGAGATTATAAGGTGGAAAGTCAATCTCCCGAACGAGCTAGAGACCTGGGCTCTTCAAGCCCACCCGTGGTCCGACCTGTTAGAGATATTTTGGGAGAAAATGTAATACCTCTTAGGATAAGTGGACCCCCCAAACCAAACAGCGGAAAAGCTGCCGATGCTTCATCACTGACACAGAGAACTGCATCCTCTGGCAGCTTGGTATCCAGTAACGAAAGCCAAGTAGAGATTAAACTTGAGACTACTAAGAGCCTTATTGATTTTGATGCCGATCCTGAACCTGTTGCTCCAACAGTTCCTCAAGCCCAACAATCTAGTGTGCCTCAACCTGTTTTGCAGTCAGGAAATCCCAGTGATGACAATTGGGCTTCTTTTGATGTTGCTTCTGAGGCAAAAGCAAATCCAAGCACCTCAAATTTAAATCCGCTTGAATCTGTTTTGTCCCAATTGTCCGTGTCGGAATCTTTACCTTCTCATACTCCAGGAGTCCAAGGACCTATTCCAGCAGCAGCTCCTAGTTTTGGCAATTTCTCAGCTTTCCCACCCAGTGGCACTTCAGTGCCATCCGTATCACCTCATAATAATGTAGGACAATGGGCCAGTTTGCAGCATCCGCAACCAACGTTCCCTGCTTCTGCTAGTCAACAATTTCCACCGTCCGTGGGTGGTGCTGTAAATAGTCAGCCATTGCATGCACCTTCTGTACCCACAGGACAGGGGCATCCGAATGCACCAATGCCACATGCATACCATCATGCCTCAAAGCCTGCTAATGAGGCTTTTAACAGTGTTGTTTCTCAACCTTCTGCTGTAGAAGTTAAACCAAGTGGAAGAACAGAACTTCCTGAAGATCTGTTCACTGTAAAACACCAGTACTTTCCTGCTCCAGTTCAAGGTTGGCAAATGGGTCCTCCGCAGGGCTTTCCAATGCAATATAATAATGTGGCGCCTGTGCCAAGTTATTCACAGCCGTCAAGGTCAACAAATCCATTCGATGTCAGCAGTAAACAAACCCCACATCAAGCCCCAAGTTTTCCTTCCATGTCTTCCTTGCACGGTGCGTTGCCTAATGTACCACCATCACTCCCAATGCACCCTCCAAGCCAGAGCAGTTCATTGCATGCATGGAATCCACCACTGCCTACCGTAGGAACCGTGCAGTCTTCAACCCTGGGTTATCCACCACATGCATGGACTCCACCCCTGCCATCCTTTCAAGGTTCCCTGCCTAATGTACCACCTTCAGGCATTACGCACCCTCCGAACCTAGGCAATCCATCCCATGCCTGGACTCCAACCCCATCGTCATCATATGCATCAGTCCCACCAGGGTCATACGCTGGGCAGCAAATGGCAACTAATATACCAATGCCAAGGCAAGGAGTTGGGAATTTCGGAACTGAGGGAAACATGTTCGGCTTGTCAAATCCAAATCAGCAGCTGCCTGATAGGCCGGGAACCACTCCCAGCTCTAACCCCTTCCCCAAAGGAGGGAATCCATTCGGGTAA
Protein sequence

>Msa0999050

MGTRFKEDERNERSIRTLLKLEPNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHRVKSVSMAKFTSQEVTALQEGGNQRAKEIYFKEWDAQRNSFPDSSNVNRLREFVKHVYEDRRFTGDRTSDKPPRGKVGDKDDSYENRRVEAYQGGSKSPPYEDTQERRYGDRSSPGGRSPGSDQESRQYGDYKRSPGRPPVVNDWRREDRRVSDGDYKVESQSPERARDLGSSSPPVVRPVRDILGENVIPLRISGPPKPNSGKAADASSLTQRTASSGSLVSSNESQVEIKLETTKSLIDFDADPEPVAPTVPQAQQSSVPQPVLQSGNPSDDNWASFDVASEAKANPSTSNLNPLESVLSQLSVSESLPSHTPGVQGPIPAAAPSFGNFSAFPPSGTSVPSVSPHNNVGQWASLQHPQPTFPASASQQFPPSVGGAVNSQPLHAPSVPTGQGHPNAPMPHAYHHASKPANEAFNSVVSQPSAVEVKPSGRTELPEDLFTVKHQYFPAPVQGWQMGPPQGFPMQYNNVAPVPSYSQPSRSTNPFDVSSKQTPHQAPSFPSMSSLHGALPNVPPSLPMHPPSQSSSLHAWNPPLPTVGTVQSSTLGYPPHAWTPPLPSFQGSLPNVPPSGITHPPNLGNPSHAWTPTPSSSYASVPPGSYAGQQMATNIPMPRQGVGNFGTEGNMFGLSNPNQQLPDRPGTTPSSNPFPKGGNPFG*