Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1000690 | AFK45025.1 | 95.804 | 143 | 5 | 1 | 1 | 143 | 1 | 142 | 1.16e-93 | 277 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1000690 | I3SXN3 | 95.804 | 143 | 5 | 1 | 1 | 143 | 1 | 142 | 5.53e-94 | 277 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002380 | Msa1000690 | 0.803436 | 3.489484e-49 | -8.615850e-47 |
| Msa0004980 | Msa1000690 | 0.818161 | 2.264122e-52 | -8.615850e-47 |
| Msa0014800 | Msa1000690 | 0.808283 | 3.341617e-50 | -8.615850e-47 |
| Msa0023000 | Msa1000690 | 0.809258 | 2.068036e-50 | -8.615850e-47 |
| Msa0030380 | Msa1000690 | 0.843971 | 1.008946e-58 | -8.615850e-47 |
| Msa0044710 | Msa1000690 | 0.819227 | 1.297374e-52 | -8.615850e-47 |
| Msa0047980 | Msa1000690 | 0.823198 | 1.576125e-53 | -8.615850e-47 |
| Msa0051170 | Msa1000690 | 0.830693 | 2.542944e-55 | -8.615850e-47 |
| Msa0051270 | Msa1000690 | 0.824463 | 7.963700e-54 | -8.615850e-47 |
| Msa0057140 | Msa1000690 | 0.805680 | 1.187872e-49 | -8.615850e-47 |
| Msa0060770 | Msa1000690 | 0.805370 | 1.379521e-49 | -8.615850e-47 |
| Msa0064350 | Msa1000690 | 0.813347 | 2.680067e-51 | -8.615850e-47 |
| Msa0073670 | Msa1000690 | 0.816530 | 5.274385e-52 | -8.615850e-47 |
| Msa0607340 | Msa1000690 | -0.810219 | 1.285424e-50 | -8.615850e-47 |
| Msa0618010 | Msa1000690 | 0.827855 | 1.241957e-54 | -8.615850e-47 |
| Msa0621120 | Msa1000690 | 0.808301 | 3.312043e-50 | -8.615850e-47 |
| Msa0623860 | Msa1000690 | 0.804131 | 2.502505e-49 | -8.615850e-47 |
| Msa0627910 | Msa1000690 | 0.802833 | 4.650438e-49 | -8.615850e-47 |
| Msa0639120 | Msa1000690 | 0.801616 | 8.279530e-49 | -8.615850e-47 |
| Msa0647380 | Msa1000690 | 0.801017 | 1.097934e-48 | -8.615850e-47 |
| Msa0650190 | Msa1000690 | 0.827935 | 1.188620e-54 | -8.615850e-47 |
| Msa0650920 | Msa1000690 | 0.806757 | 7.043549e-50 | -8.615850e-47 |
| Msa0663900 | Msa1000690 | 0.815532 | 8.808547e-52 | -8.615850e-47 |
| Msa0669850 | Msa1000690 | 0.827484 | 1.525139e-54 | -8.615850e-47 |
| Msa0673010 | Msa1000690 | -0.808944 | 2.414276e-50 | -8.615850e-47 |
| Msa0677290 | Msa1000690 | 0.807945 | 3.945165e-50 | -8.615850e-47 |
| Msa0678860 | Msa1000690 | 0.818952 | 1.498261e-52 | -8.615850e-47 |
| Msa0680240 | Msa1000690 | 0.803156 | 3.987613e-49 | -8.615850e-47 |
| Msa0684180 | Msa1000690 | -0.808328 | 3.268660e-50 | -8.615850e-47 |
| Msa0687000 | Msa1000690 | 0.801707 | 7.928960e-49 | -8.615850e-47 |
| Msa0687630 | Msa1000690 | 0.806422 | 8.290155e-50 | -8.615850e-47 |
| Msa0692940 | Msa1000690 | 0.819137 | 1.360374e-52 | -8.615850e-47 |
| Msa0709500 | Msa1000690 | 0.816733 | 4.749783e-52 | -8.615850e-47 |
| Msa0712310 | Msa1000690 | 0.817887 | 2.612120e-52 | -8.615850e-47 |
| Msa0722020 | Msa1000690 | 0.808729 | 2.684290e-50 | -8.615850e-47 |
| Msa0724830 | Msa1000690 | 0.800580 | 1.348565e-48 | -8.615850e-47 |
| Msa0734660 | Msa1000690 | 0.818598 | 1.803037e-52 | -8.615850e-47 |
| Msa0743260 | Msa1000690 | 0.804235 | 2.380786e-49 | -8.615850e-47 |
| Msa0747700 | Msa1000690 | 0.807485 | 4.940342e-50 | -8.615850e-47 |
| Msa0755340 | Msa1000690 | 0.830124 | 3.503077e-55 | -8.615850e-47 |
| Msa0763020 | Msa1000690 | 0.828739 | 7.603157e-55 | -8.615850e-47 |
| Msa0763070 | Msa1000690 | 0.831788 | 1.368350e-55 | -8.615850e-47 |
| Msa0771720 | Msa1000690 | 0.814238 | 1.706026e-51 | -8.615850e-47 |
| Msa0775260 | Msa1000690 | 0.805692 | 1.180656e-49 | -8.615850e-47 |
| Msa0776220 | Msa1000690 | 0.812278 | 4.595597e-51 | -8.615850e-47 |
| Msa0787750 | Msa1000690 | 0.836006 | 1.205151e-56 | -8.615850e-47 |
| Msa0790390 | Msa1000690 | -0.835720 | 1.424183e-56 | -8.615850e-47 |
| Msa0790850 | Msa1000690 | 0.821618 | 3.667980e-53 | -8.615850e-47 |
| Msa0797120 | Msa1000690 | 0.831291 | 1.814704e-55 | -8.615850e-47 |
| Msa0805500 | Msa1000690 | 0.830428 | 2.952906e-55 | -8.615850e-47 |
| Msa0813670 | Msa1000690 | 0.811345 | 7.332652e-51 | -8.615850e-47 |
| Msa0813720 | Msa1000690 | 0.846777 | 1.754477e-59 | -8.615850e-47 |
| Msa0813740 | Msa1000690 | 0.801974 | 6.989177e-49 | -8.615850e-47 |
| Msa0819030 | Msa1000690 | -0.808831 | 2.553029e-50 | -8.615850e-47 |
| Msa0830990 | Msa1000690 | 0.820033 | 8.494792e-53 | -8.615850e-47 |
| Msa0831580 | Msa1000690 | 0.811346 | 7.330440e-51 | -8.615850e-47 |
| Msa0136390 | Msa1000690 | 0.805884 | 1.076152e-49 | -8.615850e-47 |
| Msa0137820 | Msa1000690 | 0.800146 | 1.652588e-48 | -8.615850e-47 |
| Msa0140650 | Msa1000690 | 0.801432 | 9.027362e-49 | -8.615850e-47 |
| Msa0143080 | Msa1000690 | 0.836257 | 1.040555e-56 | -8.615850e-47 |
| Msa0169570 | Msa1000690 | 0.809012 | 2.334370e-50 | -8.615850e-47 |
| Msa0173740 | Msa1000690 | 0.847759 | 9.434807e-60 | -8.615850e-47 |
| Msa0173820 | Msa1000690 | 0.845329 | 4.346175e-59 | -8.615850e-47 |
| Msa0173830 | Msa1000690 | 0.830275 | 3.218022e-55 | -8.615850e-47 |
| Msa0178990 | Msa1000690 | 0.811855 | 5.682600e-51 | -8.615850e-47 |
| Msa0182930 | Msa1000690 | 0.809686 | 1.673768e-50 | -8.615850e-47 |
| Msa0183460 | Msa1000690 | 0.812085 | 5.061611e-51 | -8.615850e-47 |
| Msa0188680 | Msa1000690 | -0.822889 | 1.860408e-53 | -8.615850e-47 |
| Msa0194480 | Msa1000690 | 0.821008 | 5.071982e-53 | -8.615850e-47 |
| Msa0194970 | Msa1000690 | 0.822299 | 2.551455e-53 | -8.615850e-47 |
| Msa0196130 | Msa1000690 | -0.806650 | 7.420346e-50 | -8.615850e-47 |
| Msa0199690 | Msa1000690 | 0.832829 | 7.558644e-56 | -8.615850e-47 |
| Msa0199880 | Msa1000690 | 0.824010 | 1.017235e-53 | -8.615850e-47 |
| Msa0233350 | Msa1000690 | 0.801423 | 9.068499e-49 | -8.615850e-47 |
| Msa0236270 | Msa1000690 | 0.834218 | 3.402911e-56 | -8.615850e-47 |
| Msa0236980 | Msa1000690 | 0.835155 | 1.978060e-56 | -8.615850e-47 |
| Msa0238250 | Msa1000690 | -0.803085 | 4.123964e-49 | -8.615850e-47 |
| Msa0369220 | Msa1000690 | 0.836089 | 1.147936e-56 | -8.615850e-47 |
| Msa0372670 | Msa1000690 | 0.813298 | 2.746873e-51 | -8.615850e-47 |
| Msa0376510 | Msa1000690 | 0.804777 | 1.835204e-49 | -8.615850e-47 |
| Msa0376690 | Msa1000690 | 0.810614 | 1.055858e-50 | -8.615850e-47 |
| Msa0378080 | Msa1000690 | 0.807239 | 5.570893e-50 | -8.615850e-47 |
| Msa0379080 | Msa1000690 | 0.808175 | 3.523371e-50 | -8.615850e-47 |
| Msa0380040 | Msa1000690 | 0.811040 | 8.539043e-51 | -8.615850e-47 |
| Msa0388050 | Msa1000690 | 0.807270 | 5.485309e-50 | -8.615850e-47 |
| Msa0392940 | Msa1000690 | 0.814834 | 1.258685e-51 | -8.615850e-47 |
| Msa0398950 | Msa1000690 | 0.824007 | 1.019197e-53 | -8.615850e-47 |
| Msa0402330 | Msa1000690 | 0.809073 | 2.266015e-50 | -8.615850e-47 |
| Msa0422910 | Msa1000690 | 0.803802 | 2.930294e-49 | -8.615850e-47 |
| Msa0429290 | Msa1000690 | 0.813317 | 2.721391e-51 | -8.615850e-47 |
| Msa0465790 | Msa1000690 | 0.803174 | 3.953295e-49 | -8.615850e-47 |
| Msa0468160 | Msa1000690 | 0.823429 | 1.392108e-53 | -8.615850e-47 |
| Msa0469910 | Msa1000690 | -0.804066 | 2.581791e-49 | -8.615850e-47 |
| Msa0471590 | Msa1000690 | 0.829122 | 6.141421e-55 | -8.615850e-47 |
| Msa0475580 | Msa1000690 | 0.801035 | 1.088879e-48 | -8.615850e-47 |
| Msa1000690 | Msa1013040 | 0.810496 | 1.119767e-50 | -8.615850e-47 |
| Msa1000690 | Msa1026760 | 0.802117 | 6.530889e-49 | -8.615850e-47 |
| Msa1000690 | Msa1026790 | 0.800363 | 1.492949e-48 | -8.615850e-47 |
| Msa1000690 | Msa1040400 | 0.800437 | 1.442206e-48 | -8.615850e-47 |
| Msa1000690 | Msa1047400 | 0.806744 | 7.090406e-50 | -8.615850e-47 |
| Msa1000690 | Msa1084470 | 0.812841 | 3.460202e-51 | -8.615850e-47 |
| Msa1000690 | Msa1089840 | 0.825378 | 4.842117e-54 | -8.615850e-47 |
| Msa1000690 | Msa1100720 | 0.808381 | 3.184788e-50 | -8.615850e-47 |
| Msa1000690 | Msa1109570 | 0.804762 | 1.848890e-49 | -8.615850e-47 |
| Msa1000690 | Msa1125760 | 0.807157 | 5.798701e-50 | -8.615850e-47 |
| Msa1000690 | Msa1126510 | 0.812382 | 4.360154e-51 | -8.615850e-47 |
| Msa1000690 | Msa1126770 | 0.802835 | 4.646259e-49 | -8.615850e-47 |
| Msa1000690 | Msa1134110 | 0.807572 | 4.735371e-50 | -8.615850e-47 |
| Msa1000690 | Msa1137700 | 0.801283 | 9.686908e-49 | -8.615850e-47 |
| Msa1000690 | Msa1138870 | 0.811169 | 8.009700e-51 | -8.615850e-47 |
| Msa1000690 | Msa1143840 | 0.828981 | 6.645487e-55 | -8.615850e-47 |
| Msa1000690 | Msa1143930 | -0.804057 | 2.592724e-49 | -8.615850e-47 |
| Msa1000690 | Msa1165870 | 0.802221 | 6.218785e-49 | -8.615850e-47 |
| Msa1000690 | Msa1166860 | 0.806026 | 1.004733e-49 | -8.615850e-47 |
| Msa1000690 | Msa1171360 | 0.816248 | 6.100099e-52 | -8.615850e-47 |
| Msa1000690 | Msa1171870 | 0.817302 | 3.538674e-52 | -8.615850e-47 |
| Msa1000690 | Msa1175330 | 0.809630 | 1.721078e-50 | -8.615850e-47 |
| Msa1000690 | Msa1187840 | 0.811185 | 7.944533e-51 | -8.615850e-47 |
| Msa1000690 | Msa1190930 | 0.820808 | 5.639425e-53 | -8.615850e-47 |
| Msa1000690 | Msa1204250 | 0.822764 | 1.989554e-53 | -8.615850e-47 |
| Msa1000690 | Msa1211090 | 0.810486 | 1.125245e-50 | -8.615850e-47 |
| Msa1000690 | Msa1217660 | 0.813044 | 3.122989e-51 | -8.615850e-47 |
| Msa1000690 | Msa1217830 | 0.806941 | 6.440129e-50 | -8.615850e-47 |
| Msa1000690 | Msa1218600 | 0.800351 | 1.500911e-48 | -8.615850e-47 |
| Msa1000690 | Msa1249870 | 0.805157 | 1.528422e-49 | -8.615850e-47 |
| Msa1000690 | Msa1252740 | 0.801573 | 8.446223e-49 | -8.615850e-47 |
| Msa1000690 | Msa1260130 | 0.827591 | 1.437944e-54 | -8.615850e-47 |
| Msa1000690 | Msa1269300 | 0.830026 | 3.702588e-55 | -8.615850e-47 |
| Msa1000690 | Msa1283170 | 0.818961 | 1.491026e-52 | -8.615850e-47 |
| Msa1000690 | Msa1288170 | 0.804994 | 1.653451e-49 | -8.615850e-47 |
| Msa1000690 | Msa1288190 | 0.802284 | 6.035080e-49 | -8.615850e-47 |
| Msa1000690 | Msa1290190 | 0.803450 | 3.466757e-49 | -8.615850e-47 |
| Msa1000690 | Msa1293510 | 0.807223 | 5.614906e-50 | -8.615850e-47 |
| Msa1000690 | Msa1295110 | 0.815464 | 9.123822e-52 | -8.615850e-47 |
| Msa1000690 | Msa1300050 | 0.806960 | 6.381099e-50 | -8.615850e-47 |
| Msa1000690 | Msa1302190 | -0.818936 | 1.510922e-52 | -8.615850e-47 |
| Msa1000690 | Msa1304820 | 0.812776 | 3.575794e-51 | -8.615850e-47 |
| Msa1000690 | Msa1306430 | 0.821437 | 4.038682e-53 | -8.615850e-47 |
| Msa1000690 | Msa1315870 | 0.818019 | 2.438799e-52 | -8.615850e-47 |
| Msa1000690 | Msa1316830 | 0.818817 | 1.607743e-52 | -8.615850e-47 |
| Msa1000690 | Msa1333110 | 0.818153 | 2.273723e-52 | -8.615850e-47 |
| Msa1000690 | Msa1335940 | 0.810637 | 1.043970e-50 | -8.615850e-47 |
| Msa1000690 | Msa1340020 | 0.818770 | 1.648323e-52 | -8.615850e-47 |
| Msa1000690 | Msa1365150 | 0.835906 | 1.277242e-56 | -8.615850e-47 |
| Msa1000690 | Msa1367880 | 0.822828 | 1.922530e-53 | -8.615850e-47 |
| Msa1000690 | Msa1368210 | 0.801117 | 1.047678e-48 | -8.615850e-47 |
| Msa1000690 | Msa1375990 | 0.810967 | 8.858873e-51 | -8.615850e-47 |
| Msa1000690 | Msa1382410 | 0.816476 | 5.423505e-52 | -8.615850e-47 |
| Msa1000690 | Msa1397940 | 0.815638 | 8.343954e-52 | -8.615850e-47 |
| Msa1000690 | Msa1403580 | -0.846914 | 1.609976e-59 | -8.615850e-47 |
| Msa1000690 | Msa1403800 | 0.825921 | 3.600139e-54 | -8.615850e-47 |
| Msa1000690 | Msa1404010 | 0.814631 | 1.396682e-51 | -8.615850e-47 |
| Msa1000690 | Msa1404190 | 0.811677 | 6.211886e-51 | -8.615850e-47 |
| Msa1000690 | Msa1417530 | 0.810879 | 9.254464e-51 | -8.615850e-47 |
| Msa1000690 | Msa1427830 | 0.800843 | 1.191542e-48 | -8.615850e-47 |
| Msa1000690 | Msa1431040 | 0.809917 | 1.492606e-50 | -8.615850e-47 |
| Msa1000690 | Msa1432400 | 0.806087 | 9.752477e-50 | -8.615850e-47 |
| Msa1000690 | Msa1440000 | 0.816047 | 6.764571e-52 | -8.615850e-47 |
| Msa1000690 | Msa1443290 | -0.831711 | 1.429640e-55 | -8.615850e-47 |
| Msa1000690 | Msa1449880 | 0.803694 | 3.084443e-49 | -8.615850e-47 |
| Msa1000690 | Msa1451550 | 0.802342 | 5.870136e-49 | -8.615850e-47 |
| Msa1000690 | Msa1452470 | 0.814318 | 1.637936e-51 | -8.615850e-47 |
| Msa1000690 | Msa1453620 | 0.843003 | 1.830555e-58 | -8.615850e-47 |
| Msa1000690 | Msa1454110 | 0.811953 | 5.408991e-51 | -8.615850e-47 |
| Msa1000690 | Msa1460470 | 0.815684 | 8.147971e-52 | -8.615850e-47 |
| Msa1000690 | Msa1461280 | 0.822546 | 2.235891e-53 | -8.615850e-47 |
| Msa1000690 | Msa1465960 | 0.818847 | 1.583324e-52 | -8.615850e-47 |
| Msa0242230 | Msa1000690 | 0.815132 | 1.081137e-51 | -8.615850e-47 |
| Msa0244270 | Msa1000690 | 0.841315 | 5.119528e-58 | -8.615850e-47 |
| Msa0260830 | Msa1000690 | 0.800517 | 1.389051e-48 | -8.615850e-47 |
| Msa0262310 | Msa1000690 | 0.804990 | 1.656467e-49 | -8.615850e-47 |
| Msa0270220 | Msa1000690 | -0.837269 | 5.743647e-57 | -8.615850e-47 |
| Msa0280430 | Msa1000690 | 0.822755 | 1.998588e-53 | -8.615850e-47 |
| Msa0280490 | Msa1000690 | 0.810256 | 1.261683e-50 | -8.615850e-47 |
| Msa0288240 | Msa1000690 | 0.802460 | 5.551203e-49 | -8.615850e-47 |
| Msa0298700 | Msa1000690 | 0.815365 | 9.595645e-52 | -8.615850e-47 |
| Msa0300120 | Msa1000690 | 0.815170 | 1.060517e-51 | -8.615850e-47 |
| Msa0304920 | Msa1000690 | 0.811079 | 8.374167e-51 | -8.615850e-47 |
| Msa0307830 | Msa1000690 | -0.828341 | 9.489951e-55 | -8.615850e-47 |
| Msa0328210 | Msa1000690 | 0.844914 | 5.628047e-59 | -8.615850e-47 |
| Msa0337650 | Msa1000690 | 0.815637 | 8.347302e-52 | -8.615850e-47 |
| Msa0344640 | Msa1000690 | 0.806177 | 9.334423e-50 | -8.615850e-47 |
| Msa0355270 | Msa1000690 | 0.803782 | 2.957069e-49 | -8.615850e-47 |
| Msa0358170 | Msa1000690 | 0.819739 | 9.914703e-53 | -8.615850e-47 |
| Msa0487910 | Msa1000690 | 0.818906 | 1.535033e-52 | -8.615850e-47 |
| Msa0508870 | Msa1000690 | 0.814106 | 1.824155e-51 | -8.615850e-47 |
| Msa0519220 | Msa1000690 | 0.812809 | 3.517197e-51 | -8.615850e-47 |
| Msa0535030 | Msa1000690 | 0.810685 | 1.019235e-50 | -8.615850e-47 |
| Msa0535060 | Msa1000690 | 0.805585 | 1.243232e-49 | -8.615850e-47 |
| Msa0546360 | Msa1000690 | 0.801387 | 9.224618e-49 | -8.615850e-47 |
| Msa0553220 | Msa1000690 | -0.821001 | 5.092359e-53 | -8.615850e-47 |
| Msa0560470 | Msa1000690 | 0.814780 | 1.293986e-51 | -8.615850e-47 |
| Msa0562300 | Msa1000690 | -0.813492 | 2.490500e-51 | -8.615850e-47 |
| Msa0571700 | Msa1000690 | 0.808736 | 2.674754e-50 | -8.615850e-47 |
| Msa0580710 | Msa1000690 | 0.811489 | 6.824628e-51 | -8.615850e-47 |
| Msa0585900 | Msa1000690 | 0.801304 | 9.589591e-49 | -8.615850e-47 |
| Msa0590680 | Msa1000690 | 0.836432 | 9.388350e-57 | -8.615850e-47 |
| Msa0591770 | Msa1000690 | 0.820665 | 6.083351e-53 | -8.615850e-47 |
| Msa0594910 | Msa1000690 | 0.805182 | 1.510544e-49 | -8.615850e-47 |
| Msa0842830 | Msa1000690 | 0.804301 | 2.307254e-49 | -8.615850e-47 |
| Msa0847080 | Msa1000690 | 0.839431 | 1.591569e-57 | -8.615850e-47 |
| Msa0854120 | Msa1000690 | 0.812834 | 3.472934e-51 | -8.615850e-47 |
| Msa0874500 | Msa1000690 | 0.819818 | 9.511399e-53 | -8.615850e-47 |
| Msa0877410 | Msa1000690 | 0.813889 | 2.036935e-51 | -8.615850e-47 |
| Msa0878980 | Msa1000690 | -0.810902 | 9.150389e-51 | -8.615850e-47 |
| Msa0900630 | Msa1000690 | 0.914905 | 1.107033e-84 | -8.615850e-47 |
| Msa0905260 | Msa1000690 | 0.822629 | 2.138670e-53 | -8.615850e-47 |
| Msa0926460 | Msa1000690 | 0.947548 | 5.431171e-106 | -8.615850e-47 |
| Msa0933290 | Msa1000690 | 0.814053 | 1.873747e-51 | -8.615850e-47 |
| Msa0937240 | Msa1000690 | 0.801312 | 9.555243e-49 | -8.615850e-47 |
| Msa0937550 | Msa1000690 | 0.804645 | 1.955448e-49 | -8.615850e-47 |
| Msa0950320 | Msa1000690 | 0.812785 | 3.559465e-51 | -8.615850e-47 |
| Msa0959840 | Msa1000690 | 0.800249 | 1.575024e-48 | -8.615850e-47 |
| Msa0965860 | Msa1000690 | 0.954434 | 2.981221e-112 | -8.615850e-47 |
| Msa0974530 | Msa1000690 | 0.814683 | 1.359764e-51 | -8.615850e-47 |
| Msa0974810 | Msa1000690 | 0.819396 | 1.187468e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1000690 | MtrunA17_Chr6g0486801 | 89.865 | 148 | 14 | 1 | 1 | 148 | 1 | 147 | 1.81e-88 | 254 |
| Msa1000690 | MtrunA17_Chr7g0265411 | 90.164 | 122 | 12 | 0 | 1 | 122 | 1 | 122 | 4.28e-80 | 233 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1000690 | AT3G18760.1 | 64.122 | 131 | 46 | 1 | 1 | 131 | 1 | 130 | 6.77e-56 | 172 |
| Msa1000690 | AT3G18760.2 | 59.701 | 134 | 48 | 2 | 1 | 134 | 1 | 128 | 9.59e-50 | 156 |
Find 44 sgRNAs with CRISPR-Local
Find 144 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAGCTCTTTGTTGATTTC+GGG | 0.181534 | 6_4:-83887747 | None:intergenic |
| ATGCAGCTCTTTGTTGATTT+CGG | 0.208605 | 6_4:-83887748 | None:intergenic |
| GTCACTGAGGTTAAGAGTTT+TGG | 0.239764 | 6_4:+83886254 | Msa1000690:CDS |
| TAGATAATTTCTTTATAGTT+TGG | 0.260210 | 6_4:+83888140 | Msa1000690:three_prime_UTR |
| TCATGCTCACTTGCATCATT+TGG | 0.288871 | 6_4:-83887716 | None:intergenic |
| CTCTAATTGGTTTAGTTTCA+AGG | 0.335670 | 6_4:+83886198 | Msa1000690:CDS |
| AAATAAAGTGAACTAAAATA+TGG | 0.363176 | 6_4:+83887962 | Msa1000690:exon |
| TTGGTTTAGTTTCAAGGATT+GGG | 0.366475 | 6_4:+83886204 | Msa1000690:CDS |
| AACATGTGTGTAAAAGAAAT+GGG | 0.380053 | 6_4:+83886228 | Msa1000690:CDS |
| ATTGGTTTAGTTTCAAGGAT+TGG | 0.385789 | 6_4:+83886203 | Msa1000690:CDS |
| GCGTGATGGCAGATTCTATC+AGG | 0.387307 | 6_4:+83886307 | Msa1000690:CDS |
| GTAGTTTGTCCTCCTTGTTT+AGG | 0.396913 | 6_4:-83887773 | None:intergenic |
| GGAACGATGCAGTTGGGTTA+TGG | 0.403450 | 6_4:+83886275 | Msa1000690:CDS |
| TTAGAAGGCAATATATTTAG+TGG | 0.427305 | 6_4:-83888285 | None:intergenic |
| ACTATCAATAAGCACATGTT+TGG | 0.443485 | 6_4:-83888047 | None:intergenic |
| CAGTTTACTAAACATCTTCA+AGG | 0.445754 | 6_4:-83888099 | None:intergenic |
| AAACATGTGTGTAAAAGAAA+TGG | 0.446983 | 6_4:+83886227 | Msa1000690:CDS |
| CAAACTACTGCGTTGGCTAC+TGG | 0.454974 | 6_4:+83887788 | Msa1000690:CDS |
| AACAAAAGCATGCAATCATA+AGG | 0.460708 | 6_4:-83886152 | None:intergenic |
| GTTGATACTATAGTGTTAAA+CGG | 0.467880 | 6_4:-83885386 | None:intergenic |
| GTATCACTATCCTCGCCATC+AGG | 0.482219 | 6_4:-83887897 | None:intergenic |
| CTTGAGTTCATGGGAGATGA+AGG | 0.503780 | 6_4:+83887837 | Msa1000690:CDS |
| ATGATTGATTCACAAATGTA+CGG | 0.519292 | 6_4:+83888167 | Msa1000690:three_prime_UTR |
| AACTTATGCCACCAGGTGAT+CGG | 0.520839 | 6_4:-83888218 | None:intergenic |
| AAAATTGGGCTTGAGTTCAT+GGG | 0.544552 | 6_4:+83887828 | Msa1000690:CDS |
| TCTGAAATAAATAGACCTGA+TGG | 0.565799 | 6_4:+83887882 | Msa1000690:CDS |
| CTTGAGCTAATCCGATCACC+TGG | 0.575409 | 6_4:+83888207 | Msa1000690:three_prime_UTR |
| TTGTTTGTTTCCATTAGGAG+AGG | 0.579555 | 6_4:+83887999 | Msa1000690:three_prime_UTR |
| AGGAGGACAAACTACTGCGT+TGG | 0.582013 | 6_4:+83887781 | Msa1000690:CDS |
| ACTCCGGCGAGCTCAGTAGA+CGG | 0.588707 | 6_4:-83885429 | None:intergenic |
| AGATATCAACTTATGCCACC+AGG | 0.617848 | 6_4:-83888225 | None:intergenic |
| AATAAATAGACCTGATGGCG+AGG | 0.631134 | 6_4:+83887887 | Msa1000690:CDS |
| AAGAAATGGGGTTGTCACTG+AGG | 0.631658 | 6_4:+83886241 | Msa1000690:CDS |
| TCTCCGTCTACTGAGCTCGC+CGG | 0.633600 | 6_4:+83885426 | Msa1000690:five_prime_UTR |
| GGCGAGGATAGTGATACAGA+CGG | 0.636843 | 6_4:+83887903 | Msa1000690:CDS |
| CTCAGTAGACGGAGACACCA+CGG | 0.646671 | 6_4:-83885418 | None:intergenic |
| ATGAACGATGATGATAACTC+CGG | 0.654481 | 6_4:-83885445 | None:intergenic |
| AAAAGCATGCAATCATAAGG+TGG | 0.660043 | 6_4:-83886149 | None:intergenic |
| AATGATGCAAGTGAGCATGA+TGG | 0.687340 | 6_4:+83887719 | Msa1000690:CDS |
| ACATGTGTGTAAAAGAAATG+GGG | 0.688446 | 6_4:+83886229 | Msa1000690:CDS |
| AGAGCTGCATTACCTAAACA+AGG | 0.691182 | 6_4:+83887761 | Msa1000690:CDS |
| GAGCTAATCCGATCACCTGG+TGG | 0.701855 | 6_4:+83888210 | Msa1000690:three_prime_UTR |
| GTATCAACTCAACAGCGCCG+TGG | 0.717418 | 6_4:+83885401 | Msa1000690:five_prime_UTR |
| GCTGCATTACCTAAACAAGG+AGG | 0.778109 | 6_4:+83887764 | Msa1000690:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCATTTTCTTAAATTATTAT+CGG | + | chr6_4:83885762-83885781 | Msa1000690:intron | 10.0% |
| !! | TTAAATAGATTATTTGTATT+TGG | + | chr6_4:83886948-83886967 | Msa1000690:intron | 10.0% |
| !! | AAAAAAAAAAATACATTAGA+AGG | - | chr6_4:83888303-83888322 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTTTTGAAG+AGG | + | chr6_4:83888312-83888331 | Msa1000690:three_prime_UTR | 10.0% |
| !! | AGCTTATATTACATTTAAAT+TGG | - | chr6_4:83885592-83885611 | None:intergenic | 15.0% |
| !! | AATAAATAAATAAATCATGC+AGG | - | chr6_4:83886524-83886543 | None:intergenic | 15.0% |
| !! | TATAAAAATAGAATTTGACA+TGG | + | chr6_4:83887019-83887038 | Msa1000690:intron | 15.0% |
| !!! | TGTTTTTATAAACTATCTTA+AGG | + | chr6_4:83887095-83887114 | Msa1000690:intron | 15.0% |
| !!! | TTCTATTTTTTAATGAATGT+AGG | + | chr6_4:83887692-83887711 | Msa1000690:intron | 15.0% |
| !!! | TCTATTTTTTAATGAATGTA+GGG | + | chr6_4:83887693-83887712 | Msa1000690:intron | 15.0% |
| !! | AAATAAAGTGAACTAAAATA+TGG | + | chr6_4:83887962-83887981 | Msa1000690:exon | 15.0% |
| !! | TAGATAATTTCTTTATAGTT+TGG | + | chr6_4:83888140-83888159 | Msa1000690:three_prime_UTR | 15.0% |
| !! | AAAATTGAAAGCAAAAATGA+CGG | - | chr6_4:83885511-83885530 | None:intergenic | 20.0% |
| !! | TTTAATGTAATTACATTCGT+CGG | - | chr6_4:83885737-83885756 | None:intergenic | 20.0% |
| !! | CAAACTTTGATAAATTATTG+AGG | + | chr6_4:83886420-83886439 | Msa1000690:intron | 20.0% |
| !! | TAGAGAATTTCAATCAAATA+TGG | - | chr6_4:83886722-83886741 | None:intergenic | 20.0% |
| !! | ATAGTTTATAAAAACAGTGT+AGG | - | chr6_4:83887091-83887110 | None:intergenic | 20.0% |
| !!! | AGTCTTTTAGATTTATAACA+TGG | - | chr6_4:83887187-83887206 | None:intergenic | 20.0% |
| ! | GTTGATACTATAGTGTTAAA+CGG | - | chr6_4:83885389-83885408 | None:intergenic | 25.0% |
| ! | TTGGAAAAAAAAATCCATGA+CGG | - | chr6_4:83885573-83885592 | None:intergenic | 25.0% |
| ! | TTCTATTCAAGTGTAAGTAA+TGG | - | chr6_4:83885659-83885678 | None:intergenic | 25.0% |
| ! | ATTACTTACACTTGAATAGA+AGG | + | chr6_4:83885658-83885677 | Msa1000690:intron | 25.0% |
| ! | TCATTGAACAAATTGAGAAA+AGG | - | chr6_4:83885712-83885731 | None:intergenic | 25.0% |
| ! | ATGACATAACAAGTTAACTA+TGG | - | chr6_4:83886096-83886115 | None:intergenic | 25.0% |
| ! | AAACATGTGTGTAAAAGAAA+TGG | + | chr6_4:83886227-83886246 | Msa1000690:CDS | 25.0% |
| ! | AACATGTGTGTAAAAGAAAT+GGG | + | chr6_4:83886228-83886247 | Msa1000690:CDS | 25.0% |
| !! | AATTTTGCAAAACATGTATC+CGG | - | chr6_4:83886359-83886378 | None:intergenic | 25.0% |
| !! | TGTTTTGCAAAATTGACTAT+TGG | + | chr6_4:83886365-83886384 | Msa1000690:intron | 25.0% |
| !!! | CTTTTTAATTAAAGAGAGAC+AGG | + | chr6_4:83886478-83886497 | Msa1000690:intron | 25.0% |
| !!! | ATAGACAGGGTTTTAAAAAA+TGG | + | chr6_4:83886614-83886633 | Msa1000690:intron | 25.0% |
| ! | TTATTGGATGTTTAAATAGC+AGG | + | chr6_4:83886890-83886909 | Msa1000690:intron | 25.0% |
| ! | TTGTATTTGGATATATGCAT+TGG | + | chr6_4:83886961-83886980 | Msa1000690:intron | 25.0% |
| ! | AAATAGAATTTGACATGGAT+AGG | + | chr6_4:83887024-83887043 | Msa1000690:intron | 25.0% |
| ! | TTAAGGATGAAATCAATTCA+TGG | + | chr6_4:83887112-83887131 | Msa1000690:intron | 25.0% |
| ! | TAAGGATGAAATCAATTCAT+GGG | + | chr6_4:83887113-83887132 | Msa1000690:intron | 25.0% |
| ! | CTATTTAACAATACTGAGAA+TGG | - | chr6_4:83887247-83887266 | None:intergenic | 25.0% |
| ! | GTATTGGAATTTGAACAAAT+TGG | + | chr6_4:83887278-83887297 | Msa1000690:intron | 25.0% |
| ! | GAATTTGAACAAATTGGTAT+TGG | + | chr6_4:83887284-83887303 | Msa1000690:intron | 25.0% |
| ! | TTGTACTAAATATCGTATCA+CGG | - | chr6_4:83887333-83887352 | None:intergenic | 25.0% |
| !!! | TGACTTTTAGAACTTTCAAT+AGG | - | chr6_4:83887498-83887517 | None:intergenic | 25.0% |
| !! | ATAAAATCGTTTTGCATCAT+AGG | + | chr6_4:83888022-83888041 | Msa1000690:three_prime_UTR | 25.0% |
| !! | ATGATTGATTCACAAATGTA+CGG | + | chr6_4:83888167-83888186 | Msa1000690:three_prime_UTR | 25.0% |
| ! | TTAGAAGGCAATATATTTAG+TGG | - | chr6_4:83888288-83888307 | None:intergenic | 25.0% |
| !! | CATATATTTGTTTTCCGTCA+TGG | + | chr6_4:83885556-83885575 | Msa1000690:intron | 30.0% |
| GAACAAATTGAGAAAAGGTT+TGG | - | chr6_4:83885707-83885726 | None:intergenic | 30.0% | |
| CAAATTAAGCTGATGAAACA+GGG | + | chr6_4:83886070-83886089 | Msa1000690:intron | 30.0% | |
| ! | AACAAAAGCATGCAATCATA+AGG | - | chr6_4:83886155-83886174 | None:intergenic | 30.0% |
| !!! | AGAGCTTCTTTTTTCACATT+CGG | - | chr6_4:83886182-83886201 | None:intergenic | 30.0% |
| ! | GTGAAAAAAGAAGCTCTAAT+TGG | + | chr6_4:83886185-83886204 | Msa1000690:CDS | 30.0% |
| ! | CTCTAATTGGTTTAGTTTCA+AGG | + | chr6_4:83886198-83886217 | Msa1000690:CDS | 30.0% |
| ! | ATTGGTTTAGTTTCAAGGAT+TGG | + | chr6_4:83886203-83886222 | Msa1000690:CDS | 30.0% |
| ! | TTGGTTTAGTTTCAAGGATT+GGG | + | chr6_4:83886204-83886223 | Msa1000690:CDS | 30.0% |
| ACATGTGTGTAAAAGAAATG+GGG | + | chr6_4:83886229-83886248 | Msa1000690:CDS | 30.0% | |
| TTTAATTAAAGAGAGACAGG+AGG | + | chr6_4:83886481-83886500 | Msa1000690:intron | 30.0% | |
| AAATAAATCATGCAGGCATT+GGG | - | chr6_4:83886517-83886536 | None:intergenic | 30.0% | |
| TAAATAAATCATGCAGGCAT+TGG | - | chr6_4:83886518-83886537 | None:intergenic | 30.0% | |
| ATATAATCTAGGTGATGTGA+TGG | + | chr6_4:83886551-83886570 | Msa1000690:intron | 30.0% | |
| CTATATGCATCACACTAATT+TGG | - | chr6_4:83886598-83886617 | None:intergenic | 30.0% | |
| CAACAACATAATTGTGATTG+AGG | + | chr6_4:83886687-83886706 | Msa1000690:intron | 30.0% | |
| TGAAATTCTCTACAACATCA+AGG | + | chr6_4:83886730-83886749 | Msa1000690:intron | 30.0% | |
| !!! | CTATGCAGAGTTTTAAACAA+CGG | - | chr6_4:83886786-83886805 | None:intergenic | 30.0% |
| GATGTTTAAATAGCAGGTTA+TGG | + | chr6_4:83886896-83886915 | Msa1000690:intron | 30.0% | |
| ATACTTGTTTAGGTAGTGTT+TGG | - | chr6_4:83887159-83887178 | None:intergenic | 30.0% | |
| CATGGCATAAATACTTGTTT+AGG | - | chr6_4:83887169-83887188 | None:intergenic | 30.0% | |
| TTGTTAAATAGCAGCTATAG+TGG | + | chr6_4:83887256-83887275 | Msa1000690:intron | 30.0% | |
| AGTGTTGTAATCATAGATTG+TGG | - | chr6_4:83887429-83887448 | None:intergenic | 30.0% | |
| ! | TCTGAAATAAATAGACCTGA+TGG | + | chr6_4:83887882-83887901 | Msa1000690:CDS | 30.0% |
| !!! | CTGTTTTGTTTGTTTCCATT+AGG | + | chr6_4:83887994-83888013 | Msa1000690:three_prime_UTR | 30.0% |
| ACTATCAATAAGCACATGTT+TGG | - | chr6_4:83888050-83888069 | None:intergenic | 30.0% | |
| CAGTTTACTAAACATCTTCA+AGG | - | chr6_4:83888102-83888121 | None:intergenic | 30.0% | |
| ATGAACGATGATGATAACTC+CGG | - | chr6_4:83885448-83885467 | None:intergenic | 35.0% | |
| !! | TCGTTCATTTTGATATCCTC+AGG | + | chr6_4:83885460-83885479 | Msa1000690:five_prime_UTR | 35.0% |
| CAAATTGAGAAAAGGTTTGG+CGG | - | chr6_4:83885704-83885723 | None:intergenic | 35.0% | |
| CTCAAATAAGCTATGAAGCA+TGG | - | chr6_4:83885823-83885842 | None:intergenic | 35.0% | |
| GCAAATTAAGCTGATGAAAC+AGG | + | chr6_4:83886069-83886088 | Msa1000690:intron | 35.0% | |
| ! | AAAAGCATGCAATCATAAGG+TGG | - | chr6_4:83886152-83886171 | None:intergenic | 35.0% |
| ! | CTCACACTCATTATTTTCAC+CGG | + | chr6_4:83886337-83886356 | Msa1000690:intron | 35.0% |
| TTAGTGTGATGCATATAGAC+AGG | + | chr6_4:83886600-83886619 | Msa1000690:intron | 35.0% | |
| TAGTGTGATGCATATAGACA+GGG | + | chr6_4:83886601-83886620 | Msa1000690:intron | 35.0% | |
| AATTGTGATTGAGGTTGCAT+TGG | + | chr6_4:83886696-83886715 | Msa1000690:intron | 35.0% | |
| ! | CGTTGTTTAAAACTCTGCAT+AGG | + | chr6_4:83886784-83886803 | Msa1000690:intron | 35.0% |
| GTTTCACATAACACAACTCT+TGG | + | chr6_4:83886849-83886868 | Msa1000690:intron | 35.0% | |
| ACATAACACAACTCTTGGTT+TGG | + | chr6_4:83886854-83886873 | Msa1000690:intron | 35.0% | |
| CATAACACAACTCTTGGTTT+GGG | + | chr6_4:83886855-83886874 | Msa1000690:intron | 35.0% | |
| ! | ATAACACAACTCTTGGTTTG+GGG | + | chr6_4:83886856-83886875 | Msa1000690:intron | 35.0% |
| ! | TGGGGTAGAAGTTGATTTAT+TGG | + | chr6_4:83886874-83886893 | Msa1000690:intron | 35.0% |
| AGAATGGTAATATCCACATG+GGG | - | chr6_4:83887231-83887250 | None:intergenic | 35.0% | |
| GAGAATGGTAATATCCACAT+GGG | - | chr6_4:83887232-83887251 | None:intergenic | 35.0% | |
| TGAGAATGGTAATATCCACA+TGG | - | chr6_4:83887233-83887252 | None:intergenic | 35.0% | |
| AATAGCAGCTATAGTGGTAT+TGG | + | chr6_4:83887262-83887281 | Msa1000690:intron | 35.0% | |
| ! | TTAGTTTGAGAGTCTGTCTT+TGG | + | chr6_4:83887596-83887615 | Msa1000690:intron | 35.0% |
| !! | ATGCAGCTCTTTGTTGATTT+CGG | - | chr6_4:83887751-83887770 | None:intergenic | 35.0% |
| AAAAATTGGGCTTGAGTTCA+TGG | + | chr6_4:83887827-83887846 | Msa1000690:CDS | 35.0% | |
| AAAATTGGGCTTGAGTTCAT+GGG | + | chr6_4:83887828-83887847 | Msa1000690:CDS | 35.0% | |
| TTGTTTGTTTCCATTAGGAG+AGG | + | chr6_4:83887999-83888018 | Msa1000690:three_prime_UTR | 35.0% | |
| ! | ACGATTTTATCCTCTCCTAA+TGG | - | chr6_4:83888012-83888031 | None:intergenic | 35.0% |
| ! | AAATGACGGAAGAGAAAGAG+AGG | - | chr6_4:83885497-83885516 | None:intergenic | 40.0% |
| ! | TGCAGATTTCGTTTTCGTGA+TGG | - | chr6_4:83885538-83885557 | None:intergenic | 40.0% |
| ACACTTGAATAGAAGGCAAG+CGG | + | chr6_4:83885665-83885684 | Msa1000690:intron | 40.0% | |
| ! | GTCACTGAGGTTAAGAGTTT+TGG | + | chr6_4:83886254-83886273 | Msa1000690:CDS | 40.0% |
| !!! | AGTTTTGGAACGATGCAGTT+GGG | + | chr6_4:83886269-83886288 | Msa1000690:CDS | 40.0% |
| ! | TATGGTGTGAAAAAGCGTGA+TGG | + | chr6_4:83886293-83886312 | Msa1000690:CDS | 40.0% |
| ! | GCAACACAATGCTTTTGATG+TGG | + | chr6_4:83886658-83886677 | Msa1000690:intron | 40.0% |
| CATGGATAGGAGACAAAAAG+TGG | + | chr6_4:83887037-83887056 | Msa1000690:intron | 40.0% | |
| ! | CAGTGTTTTCAAACTCCACT+AGG | - | chr6_4:83887399-83887418 | None:intergenic | 40.0% |
| AAAAGAGTTGCACGTTCTTC+TGG | + | chr6_4:83887626-83887645 | Msa1000690:intron | 40.0% | |
| TCATGCTCACTTGCATCATT+TGG | - | chr6_4:83887719-83887738 | None:intergenic | 40.0% | |
| AATGATGCAAGTGAGCATGA+TGG | + | chr6_4:83887719-83887738 | Msa1000690:CDS | 40.0% | |
| !! | TGCAGCTCTTTGTTGATTTC+GGG | - | chr6_4:83887750-83887769 | None:intergenic | 40.0% |
| AGAGCTGCATTACCTAAACA+AGG | + | chr6_4:83887761-83887780 | Msa1000690:CDS | 40.0% | |
| ! | GTAGTTTGTCCTCCTTGTTT+AGG | - | chr6_4:83887776-83887795 | None:intergenic | 40.0% |
| AAGCAGCGTGACACAAAAAT+TGG | + | chr6_4:83887813-83887832 | Msa1000690:CDS | 40.0% | |
| AGCAGCGTGACACAAAAATT+GGG | + | chr6_4:83887814-83887833 | Msa1000690:CDS | 40.0% | |
| ! | AATAAATAGACCTGATGGCG+AGG | + | chr6_4:83887887-83887906 | Msa1000690:CDS | 40.0% |
| AGATATCAACTTATGCCACC+AGG | - | chr6_4:83888228-83888247 | None:intergenic | 40.0% | |
| CACTTGAATAGAAGGCAAGC+GGG | + | chr6_4:83885666-83885685 | Msa1000690:intron | 45.0% | |
| TGAAGCATGGACACAAACTC+CGG | - | chr6_4:83885810-83885829 | None:intergenic | 45.0% | |
| AAGAAATGGGGTTGTCACTG+AGG | + | chr6_4:83886241-83886260 | Msa1000690:CDS | 45.0% | |
| !!! | GAGTTTTGGAACGATGCAGT+TGG | + | chr6_4:83886268-83886287 | Msa1000690:CDS | 45.0% |
| ATGGTTCGATTCTGTAGCAC+AGG | + | chr6_4:83886633-83886652 | Msa1000690:intron | 45.0% | |
| AACGGTCAGTGTATCTGTTG+TGG | - | chr6_4:83886768-83886787 | None:intergenic | 45.0% | |
| CTGCATAGGTAGATGCGAAT+TGG | + | chr6_4:83886798-83886817 | Msa1000690:intron | 45.0% | |
| !! | CGTTCTTCTGGAACTTCGAA+TGG | + | chr6_4:83887638-83887657 | Msa1000690:intron | 45.0% |
| GCTGCATTACCTAAACAAGG+AGG | + | chr6_4:83887764-83887783 | Msa1000690:CDS | 45.0% | |
| CTTGAGTTCATGGGAGATGA+AGG | + | chr6_4:83887837-83887856 | Msa1000690:CDS | 45.0% | |
| AACTTATGCCACCAGGTGAT+CGG | - | chr6_4:83888221-83888240 | None:intergenic | 45.0% | |
| !! | TATTTATTTATATATAATCT+AGG | + | chr6_4:83886540-83886559 | Msa1000690:intron | 5.0% |
| AGAGGATAGCTTCGAACCTG+AGG | - | chr6_4:83885479-83885498 | None:intergenic | 50.0% | |
| TGACGTGTTCGTTTCGTGTC+CGG | + | chr6_4:83885788-83885807 | Msa1000690:intron | 50.0% | |
| GGAACGATGCAGTTGGGTTA+TGG | + | chr6_4:83886275-83886294 | Msa1000690:CDS | 50.0% | |
| GCGTGATGGCAGATTCTATC+AGG | + | chr6_4:83886307-83886326 | Msa1000690:CDS | 50.0% | |
| ! | CCACATGGGGCATTTAGAAG+AGG | - | chr6_4:83887218-83887237 | None:intergenic | 50.0% |
| CCTCTTCTAAATGCCCCATG+TGG | + | chr6_4:83887215-83887234 | Msa1000690:intron | 50.0% | |
| GCTATAGCACTGTTGCCTAG+TGG | + | chr6_4:83887381-83887400 | Msa1000690:intron | 50.0% | |
| AGGAGGACAAACTACTGCGT+TGG | + | chr6_4:83887781-83887800 | Msa1000690:CDS | 50.0% | |
| !! | CAAACTACTGCGTTGGCTAC+TGG | + | chr6_4:83887788-83887807 | Msa1000690:CDS | 50.0% |
| GTATCACTATCCTCGCCATC+AGG | - | chr6_4:83887900-83887919 | None:intergenic | 50.0% | |
| GGCGAGGATAGTGATACAGA+CGG | + | chr6_4:83887903-83887922 | Msa1000690:CDS | 50.0% | |
| CTTGAGCTAATCCGATCACC+TGG | + | chr6_4:83888207-83888226 | Msa1000690:three_prime_UTR | 50.0% | |
| GTATCAACTCAACAGCGCCG+TGG | + | chr6_4:83885401-83885420 | Msa1000690:five_prime_UTR | 55.0% | |
| CTCAGTAGACGGAGACACCA+CGG | - | chr6_4:83885421-83885440 | None:intergenic | 55.0% | |
| GAGCTAATCCGATCACCTGG+TGG | + | chr6_4:83888210-83888229 | Msa1000690:three_prime_UTR | 55.0% | |
| TCTCCGTCTACTGAGCTCGC+CGG | + | chr6_4:83885426-83885445 | Msa1000690:five_prime_UTR | 60.0% | |
| ACTCCGGCGAGCTCAGTAGA+CGG | - | chr6_4:83885432-83885451 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 83885373 | 83888336 | 83885373 | ID=Msa1000690;Name=Msa1000690 |
| chr6_4 | mRNA | 83885373 | 83888336 | 83885373 | ID=Msa1000690-mRNA-1;Parent=Msa1000690;Name=Msa1000690-mRNA-1;_AED=0.00;_eAED=0.00;_QI=132|1|1|1|0.5|0.33|3|359|148 |
| chr6_4 | exon | 83885373 | 83885481 | 83885373 | ID=Msa1000690-mRNA-1:exon:16231;Parent=Msa1000690-mRNA-1 |
| chr6_4 | exon | 83886123 | 83886328 | 83886123 | ID=Msa1000690-mRNA-1:exon:16232;Parent=Msa1000690-mRNA-1 |
| chr6_4 | exon | 83887714 | 83888336 | 83887714 | ID=Msa1000690-mRNA-1:exon:16233;Parent=Msa1000690-mRNA-1 |
| chr6_4 | five_prime_UTR | 83885373 | 83885481 | 83885373 | ID=Msa1000690-mRNA-1:five_prime_utr;Parent=Msa1000690-mRNA-1 |
| chr6_4 | five_prime_UTR | 83886123 | 83886145 | 83886123 | ID=Msa1000690-mRNA-1:five_prime_utr;Parent=Msa1000690-mRNA-1 |
| chr6_4 | CDS | 83886146 | 83886328 | 83886146 | ID=Msa1000690-mRNA-1:cds;Parent=Msa1000690-mRNA-1 |
| chr6_4 | CDS | 83887714 | 83887977 | 83887714 | ID=Msa1000690-mRNA-1:cds;Parent=Msa1000690-mRNA-1 |
| chr6_4 | three_prime_UTR | 83887978 | 83888336 | 83887978 | ID=Msa1000690-mRNA-1:three_prime_utr;Parent=Msa1000690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
