AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1333110


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1333110 MtrunA17_Chr4g0068941 96.109 257 6 1 1 257 1 253 4.32e-179 492
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1333110 AT5G30490.1 57.269 227 81 4 33 251 16 234 1.42e-65 204
Msa1333110 AT5G30490.2 57.269 227 81 4 33 251 16 234 1.42e-65 204
Msa1333110 AT5G30490.3 57.269 227 81 4 33 251 16 234 1.42e-65 204

Find 80 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAACTGCTAATAACTTTAT+TGG 0.127150 8_4:-53159322 None:intergenic
GTAGAACTGGATGTCTTATT+TGG 0.132758 8_4:+53159496 Msa1333110:intron
ATACCTTGGCGAATTATTTA+TGG 0.175905 8_4:+53160725 Msa1333110:three_prime_UTR
GAAGAGTTCAAACCAGTATT+TGG 0.182757 8_4:+53160563 Msa1333110:CDS
AAATGACATGGTACTTAATA+TGG 0.196878 8_4:+53160872 Msa1333110:three_prime_UTR
AAAGGACTGGGGAGAATTTA+AGG 0.207621 8_4:+53160500 Msa1333110:CDS
TAAAATATACAGATGTATTT+TGG 0.214657 8_4:+53160913 Msa1333110:three_prime_UTR
TTGCATATCTGGTCGCTTCC+TGG 0.258995 8_4:-53160661 None:intergenic
GTTTATTATCTTGGTGTTCC+TGG 0.283769 8_4:+53160759 Msa1333110:three_prime_UTR
GTATATTCATCGATCTCTTC+TGG 0.294235 8_4:-53161124 None:intergenic
TTGTCATGAGTTTATTATCT+TGG 0.301389 8_4:+53160750 Msa1333110:three_prime_UTR
TGGTGTTCCTGGAAATGTTT+TGG 0.311183 8_4:+53160770 Msa1333110:three_prime_UTR
TCAGAAGCCAAAACATTTCC+AGG 0.336395 8_4:-53160777 None:intergenic
ACAGCGTCGTCTTGCATATC+TGG 0.348328 8_4:-53160672 None:intergenic
TCCAGGCTTTCCCCTGGAAC+AGG 0.356037 8_4:-53159135 None:intergenic
TTTATTCATTTGTTCCCATA+TGG 0.359963 8_4:-53159292 None:intergenic
CCCAGGAGATTCAGTTGTCT+TGG 0.360854 8_4:-53159528 None:intergenic
TCTGTCAAAGAACCTGTTCC+AGG 0.362610 8_4:+53159123 Msa1333110:CDS
AGGAAACCTTATCCAAATAC+TGG 0.366492 8_4:-53160575 None:intergenic
GTTCTCTGAGGCTCACTTCA+TGG 0.369524 8_4:-53160958 None:intergenic
GTAATCTGTTCGCTGCAAAA+AGG 0.374277 8_4:-53160595 None:intergenic
TAGAACTGGATGTCTTATTT+GGG 0.385492 8_4:+53159497 Msa1333110:intron
CTTTCGTTTCTGCCTCAAGC+AGG 0.388900 8_4:+53159651 Msa1333110:CDS
TGTACTTGATAAGACCAAAA+AGG 0.392164 8_4:+53160482 Msa1333110:CDS
AGCAGAAGGTGCAGGAGCTT+TGG 0.392692 8_4:-53160415 None:intergenic
TTCAAACCAGTATTTGGATA+AGG 0.393487 8_4:+53160569 Msa1333110:CDS
GGAAAGCCTGGAACCAAAAC+AGG 0.393883 8_4:+53159146 Msa1333110:CDS
ACTGAGGTTCGAGACTTTGC+TGG 0.395239 8_4:+53160333 Msa1333110:CDS
CACGATTGGCATTGCAATCC+AGG 0.397589 8_4:+53160643 Msa1333110:CDS
AAGCTCAAGTTGATGCCATA+TGG 0.405389 8_4:+53159277 Msa1333110:CDS
AAATGAAGGCAGTTGAAGTA+TGG 0.405927 8_4:+53160697 Msa1333110:exon
ACCTGTTCCAGGGGAAAGCC+TGG 0.406254 8_4:+53159134 Msa1333110:CDS
CCCTCTCTCGCTCAAATTCA+CGG 0.409298 8_4:-53160617 None:intergenic
GAACCAAAACAGGATGTTAC+TGG 0.415009 8_4:+53159156 Msa1333110:CDS
TTTGGTTCCAGGCTTTCCCC+TGG 0.416515 8_4:-53159141 None:intergenic
TCACCAGTAACATCCTGTTT+TGG 0.423793 8_4:-53159159 None:intergenic
CTGGATGTCTTATTTGGGAT+TGG 0.424113 8_4:+53159502 Msa1333110:CDS
TTAATATGGATGAGGAAAAC+AGG 0.433111 8_4:+53160886 Msa1333110:three_prime_UTR
CCCAAGACAACTGAATCTCC+TGG 0.433746 8_4:+53159527 Msa1333110:CDS
ATTGTTTCAGATACAATCAA+TGG 0.433797 8_4:+53159087 Msa1333110:intron
TGCTGCTGCTGCTCTTGCAG+CGG 0.435556 8_4:+53159616 Msa1333110:CDS
ATATGGGAACAAATGAATAA+AGG 0.438066 8_4:+53159294 Msa1333110:CDS
CCAGGAGATTCAGTTGTCTT+GGG 0.439891 8_4:-53159527 None:intergenic
CAAAATGATTCTTGTAAGCT+AGG 0.446612 8_4:-53161006 None:intergenic
CTAAAATTGATATTGATCAA+TGG 0.459264 8_4:-53161056 None:intergenic
AGCTCAAGTTGATGCCATAT+GGG 0.464195 8_4:+53159278 Msa1333110:CDS
GAATTTAAGGAAGAAAATAA+AGG 0.476093 8_4:+53160513 Msa1333110:CDS
CGAAGATCTCTTCTTTGATG+TGG 0.495435 8_4:-53159373 None:intergenic
GCTTGTGGATTCTGATTCAA+AGG 0.498471 8_4:+53160377 Msa1333110:CDS
TTCGTTTCTGCCTCAAGCAG+GGG 0.501811 8_4:+53159653 Msa1333110:CDS
TCAAAGTGTACCTGGTGTGC+TGG 0.507207 8_4:+53159562 Msa1333110:CDS
GCATCCACAGCAGAAGGTGC+AGG 0.508516 8_4:-53160423 None:intergenic
TTTCGTTTCTGCCTCAAGCA+GGG 0.511551 8_4:+53159652 Msa1333110:CDS
GCGAGAGAGGGATGCACGAT+TGG 0.512295 8_4:+53160629 Msa1333110:CDS
AGCTCCTGCACCTTCTGCTG+TGG 0.517744 8_4:+53160419 Msa1333110:CDS
CACATCAAAGAAGAGATCTT+CGG 0.526656 8_4:+53159374 Msa1333110:CDS
AGCACACCAGGTACACTTTG+AGG 0.529967 8_4:-53159560 None:intergenic
TGTGCTCCTCAAAGTGTACC+TGG 0.545125 8_4:+53159554 Msa1333110:CDS
TAAGGAAGAAAATAAAGGAC+TGG 0.554675 8_4:+53160518 Msa1333110:CDS
CTGTCAAAGAACCTGTTCCA+GGG 0.556764 8_4:+53159124 Msa1333110:CDS
GTACTGCCTTCCAGCACACC+AGG 0.559479 8_4:-53159572 None:intergenic
ACCGTGAATTTGAGCGAGAG+AGG 0.565595 8_4:+53160616 Msa1333110:CDS
CATGGTACTTAATATGGATG+AGG 0.570166 8_4:+53160878 Msa1333110:three_prime_UTR
TGGAATGCTTTCAAATGACA+TGG 0.576365 8_4:+53160860 Msa1333110:three_prime_UTR
AGACGACGCTGTATAAATGA+AGG 0.577491 8_4:+53160683 Msa1333110:exon
CCGTGAATTTGAGCGAGAGA+GGG 0.577774 8_4:+53160617 Msa1333110:CDS
CTTTGAGGAGCACACTGCCC+AGG 0.584341 8_4:-53159545 None:intergenic
CCAAGACAACTGAATCTCCT+GGG 0.592003 8_4:+53159528 Msa1333110:CDS
TCGTTTCTGCCTCAAGCAGG+GGG 0.596370 8_4:+53159654 Msa1333110:CDS
AGGACAGCATCCACAGCAGA+AGG 0.596814 8_4:-53160429 None:intergenic
AAACCATAAATAATTCGCCA+AGG 0.622206 8_4:-53160728 None:intergenic
GAAGTATGGAGTTGATACCT+TGG 0.624618 8_4:+53160711 Msa1333110:three_prime_UTR
AGTGTACCTGGTGTGCTGGA+AGG 0.640031 8_4:+53159566 Msa1333110:CDS
GAAGGCAGTACAAGTGACGA+AGG 0.646723 8_4:+53159584 Msa1333110:CDS
TGCAGAATATGGGATAGCAA+AGG 0.647146 8_4:-53161157 None:intergenic
TGTGGATTCTGATTCAAAGG+AGG 0.652024 8_4:+53160380 Msa1333110:CDS
TTTCCATTATCAGATTACTG+AGG 0.657648 8_4:+53160317 Msa1333110:intron
TGTCAAAGAACCTGTTCCAG+GGG 0.662815 8_4:+53159125 Msa1333110:CDS
TGTGAATGACATGTTCTCTG+AGG 0.694386 8_4:-53160970 None:intergenic
AAGGCAGTACAAGTGACGAA+GGG 0.707515 8_4:+53159585 Msa1333110:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAAAAACAAAACAA+CGG - chr8_4:53159410-53159429 None:intergenic 10.0%
!! AAAAATAAAAAACAAAACAA+CGG - chr8_4:53159410-53159429 None:intergenic 10.0%
!!! TAAAATATACAGATGTATTT+TGG + chr8_4:53160913-53160932 Msa1333110:three_prime_UTR 15.0%
!!! TAAAATATACAGATGTATTT+TGG + chr8_4:53160913-53160932 Msa1333110:three_prime_UTR 15.0%
!!! ATGTTTATTTTCGAGATTTA+TGG + chr8_4:53159203-53159222 Msa1333110:intron 20.0%
!! AAAACTGCTAATAACTTTAT+TGG - chr8_4:53159325-53159344 None:intergenic 20.0%
!!! TGTTTTATTTTTACGGTTAT+TGG - chr8_4:53160115-53160134 None:intergenic 20.0%
!! TAACCGTAAAAATAAAACAT+TGG + chr8_4:53160116-53160135 Msa1333110:intron 20.0%
!!! GAACCAATGTTTTATTTTTA+CGG - chr8_4:53160122-53160141 None:intergenic 20.0%
!! TTCCAATATTTGATATAGTA+GGG + chr8_4:53160139-53160158 Msa1333110:intron 20.0%
!! GTTCTATGAATAATGAATAA+TGG - chr8_4:53160259-53160278 None:intergenic 20.0%
!! AATTGAATATAAAAAGCTTG+TGG + chr8_4:53160362-53160381 Msa1333110:CDS 20.0%
!! GAATTTAAGGAAGAAAATAA+AGG + chr8_4:53160513-53160532 Msa1333110:CDS 20.0%
!! CTAAAATTGATATTGATCAA+TGG - chr8_4:53161059-53161078 None:intergenic 20.0%
!!! AGTTTTAAATGAACTAATGT+CGG - chr8_4:53161083-53161102 None:intergenic 20.0%
!!! ATGTTTATTTTCGAGATTTA+TGG + chr8_4:53159203-53159222 Msa1333110:intron 20.0%
!! AAAACTGCTAATAACTTTAT+TGG - chr8_4:53159325-53159344 None:intergenic 20.0%
!!! TGTTTTATTTTTACGGTTAT+TGG - chr8_4:53160115-53160134 None:intergenic 20.0%
!! TAACCGTAAAAATAAAACAT+TGG + chr8_4:53160116-53160135 Msa1333110:intron 20.0%
!!! GAACCAATGTTTTATTTTTA+CGG - chr8_4:53160122-53160141 None:intergenic 20.0%
!! TTCCAATATTTGATATAGTA+GGG + chr8_4:53160139-53160158 Msa1333110:intron 20.0%
!! GTTCTATGAATAATGAATAA+TGG - chr8_4:53160259-53160278 None:intergenic 20.0%
!! AATTGAATATAAAAAGCTTG+TGG + chr8_4:53160362-53160381 Msa1333110:CDS 20.0%
!! GAATTTAAGGAAGAAAATAA+AGG + chr8_4:53160513-53160532 Msa1333110:CDS 20.0%
!! CTAAAATTGATATTGATCAA+TGG - chr8_4:53161059-53161078 None:intergenic 20.0%
!!! AGTTTTAAATGAACTAATGT+CGG - chr8_4:53161083-53161102 None:intergenic 20.0%
! AAAAACAAATCTAGATGGAT+CGG - chr8_4:53158907-53158926 None:intergenic 25.0%
! CTATGAAAAACAAATCTAGA+TGG - chr8_4:53158912-53158931 None:intergenic 25.0%
!!! GATTTGTTTTTCATAGTGAT+TGG + chr8_4:53158916-53158935 Msa1333110:intron 25.0%
! TGGAAAATTGTAGTGAATTA+GGG - chr8_4:53158975-53158994 None:intergenic 25.0%
! ATATGAAAAAGGAGTAAAAG+AGG - chr8_4:53158998-53159017 None:intergenic 25.0%
! ATTGTTTCAGATACAATCAA+TGG + chr8_4:53159087-53159106 Msa1333110:intron 25.0%
! TTTATTCATTTGTTCCCATA+TGG - chr8_4:53159295-53159314 None:intergenic 25.0%
! ATATGGGAACAAATGAATAA+AGG + chr8_4:53159294-53159313 Msa1333110:CDS 25.0%
! CAATTAGTATTGTCAAATAG+CGG + chr8_4:53159925-53159944 Msa1333110:intron 25.0%
! AATTCCACTATGTTATAACA+GGG - chr8_4:53159960-53159979 None:intergenic 25.0%
! AAATTCCACTATGTTATAAC+AGG - chr8_4:53159961-53159980 None:intergenic 25.0%
! GTTCCAATATTTGATATAGT+AGG + chr8_4:53160138-53160157 Msa1333110:intron 25.0%
! GAAACTCAAATGTAATATGT+AGG - chr8_4:53160281-53160300 None:intergenic 25.0%
!!! TTTTCTTCTTGATTTGTTCA+AGG - chr8_4:53160452-53160471 None:intergenic 25.0%
! TTGTCATGAGTTTATTATCT+TGG + chr8_4:53160750-53160769 Msa1333110:three_prime_UTR 25.0%
! AAATGACATGGTACTTAATA+TGG + chr8_4:53160872-53160891 Msa1333110:three_prime_UTR 25.0%
! TGATCAATGGCTTAAAAAAA+TGG - chr8_4:53161046-53161065 None:intergenic 25.0%
!!! TTTAAAACTCATTTTACGTC+TGG + chr8_4:53161094-53161113 Msa1333110:three_prime_UTR 25.0%
! AAAAACAAATCTAGATGGAT+CGG - chr8_4:53158907-53158926 None:intergenic 25.0%
! CTATGAAAAACAAATCTAGA+TGG - chr8_4:53158912-53158931 None:intergenic 25.0%
!!! GATTTGTTTTTCATAGTGAT+TGG + chr8_4:53158916-53158935 Msa1333110:intron 25.0%
! TGGAAAATTGTAGTGAATTA+GGG - chr8_4:53158975-53158994 None:intergenic 25.0%
! ATATGAAAAAGGAGTAAAAG+AGG - chr8_4:53158998-53159017 None:intergenic 25.0%
! ATTGTTTCAGATACAATCAA+TGG + chr8_4:53159087-53159106 Msa1333110:intron 25.0%
! TTTATTCATTTGTTCCCATA+TGG - chr8_4:53159295-53159314 None:intergenic 25.0%
! ATATGGGAACAAATGAATAA+AGG + chr8_4:53159294-53159313 Msa1333110:CDS 25.0%
! CAATTAGTATTGTCAAATAG+CGG + chr8_4:53159925-53159944 Msa1333110:intron 25.0%
! AATTCCACTATGTTATAACA+GGG - chr8_4:53159960-53159979 None:intergenic 25.0%
! AAATTCCACTATGTTATAAC+AGG - chr8_4:53159961-53159980 None:intergenic 25.0%
! GTTCCAATATTTGATATAGT+AGG + chr8_4:53160138-53160157 Msa1333110:intron 25.0%
! GAAACTCAAATGTAATATGT+AGG - chr8_4:53160281-53160300 None:intergenic 25.0%
!!! TTTTCTTCTTGATTTGTTCA+AGG - chr8_4:53160452-53160471 None:intergenic 25.0%
! TTGTCATGAGTTTATTATCT+TGG + chr8_4:53160750-53160769 Msa1333110:three_prime_UTR 25.0%
! AAATGACATGGTACTTAATA+TGG + chr8_4:53160872-53160891 Msa1333110:three_prime_UTR 25.0%
! TGATCAATGGCTTAAAAAAA+TGG - chr8_4:53161046-53161065 None:intergenic 25.0%
!!! TTTAAAACTCATTTTACGTC+TGG + chr8_4:53161094-53161113 Msa1333110:three_prime_UTR 25.0%
GTGGAAAATTGTAGTGAATT+AGG - chr8_4:53158976-53158995 None:intergenic 30.0%
!! GTTGCTTTGGATTACAATTT+TGG + chr8_4:53159061-53159080 Msa1333110:intron 30.0%
ACATTCACAATTTGAGTAGA+AGG - chr8_4:53159478-53159497 None:intergenic 30.0%
TCAAATTGTGAATGTAGAAC+TGG + chr8_4:53159483-53159502 Msa1333110:intron 30.0%
!! TAGAACTGGATGTCTTATTT+GGG + chr8_4:53159497-53159516 Msa1333110:intron 30.0%
ATTAGCACCTGACTAAAAAT+AGG - chr8_4:53159717-53159736 None:intergenic 30.0%
ATCCAAGAAAATTGTGACAT+AGG + chr8_4:53159868-53159887 Msa1333110:intron 30.0%
! TGACAATACTAATTGGTGAT+TGG - chr8_4:53159920-53159939 None:intergenic 30.0%
CGCTATTTGACAATACTAAT+TGG - chr8_4:53159927-53159946 None:intergenic 30.0%
AAATAGCTGTTATAGCATTG+CGG + chr8_4:53160031-53160050 Msa1333110:intron 30.0%
AGCCCTACTATATCAAATAT+TGG - chr8_4:53160144-53160163 None:intergenic 30.0%
ATTGTATGGTATGCTCAAAT+TGG - chr8_4:53160185-53160204 None:intergenic 30.0%
AATTTGAGCATACCATACAA+TGG + chr8_4:53160184-53160203 Msa1333110:intron 30.0%
ATGGAAAATTGTCCATTGTA+TGG - chr8_4:53160199-53160218 None:intergenic 30.0%
TGAATTCAAACCACTTCAAA+TGG - chr8_4:53160218-53160237 None:intergenic 30.0%
AAGTGGTTTGAATTCATGTT+TGG + chr8_4:53160222-53160241 Msa1333110:intron 30.0%
TTTCCATTATCAGATTACTG+AGG + chr8_4:53160317-53160336 Msa1333110:intron 30.0%
TGTACTTGATAAGACCAAAA+AGG + chr8_4:53160482-53160501 Msa1333110:CDS 30.0%
TAAGGAAGAAAATAAAGGAC+TGG + chr8_4:53160518-53160537 Msa1333110:CDS 30.0%
TTCAAACCAGTATTTGGATA+AGG + chr8_4:53160569-53160588 Msa1333110:CDS 30.0%
ATACCTTGGCGAATTATTTA+TGG + chr8_4:53160725-53160744 Msa1333110:three_prime_UTR 30.0%
AAACCATAAATAATTCGCCA+AGG - chr8_4:53160731-53160750 None:intergenic 30.0%
!! AAAGATTTTGATCACATCAG+TGG + chr8_4:53160809-53160828 Msa1333110:three_prime_UTR 30.0%
!! AAGATTTTGATCACATCAGT+GGG + chr8_4:53160810-53160829 Msa1333110:three_prime_UTR 30.0%
!!! TCTTTTTGAGGTTCAAGATT+TGG + chr8_4:53160840-53160859 Msa1333110:three_prime_UTR 30.0%
TTAATATGGATGAGGAAAAC+AGG + chr8_4:53160886-53160905 Msa1333110:three_prime_UTR 30.0%
CAAAATGATTCTTGTAAGCT+AGG - chr8_4:53161009-53161028 None:intergenic 30.0%
GTGGAAAATTGTAGTGAATT+AGG - chr8_4:53158976-53158995 None:intergenic 30.0%
!! GTTGCTTTGGATTACAATTT+TGG + chr8_4:53159061-53159080 Msa1333110:intron 30.0%
ACATTCACAATTTGAGTAGA+AGG - chr8_4:53159478-53159497 None:intergenic 30.0%
TCAAATTGTGAATGTAGAAC+TGG + chr8_4:53159483-53159502 Msa1333110:intron 30.0%
!! TAGAACTGGATGTCTTATTT+GGG + chr8_4:53159497-53159516 Msa1333110:intron 30.0%
ATTAGCACCTGACTAAAAAT+AGG - chr8_4:53159717-53159736 None:intergenic 30.0%
ATCCAAGAAAATTGTGACAT+AGG + chr8_4:53159868-53159887 Msa1333110:intron 30.0%
! TGACAATACTAATTGGTGAT+TGG - chr8_4:53159920-53159939 None:intergenic 30.0%
CGCTATTTGACAATACTAAT+TGG - chr8_4:53159927-53159946 None:intergenic 30.0%
AAATAGCTGTTATAGCATTG+CGG + chr8_4:53160031-53160050 Msa1333110:intron 30.0%
AGCCCTACTATATCAAATAT+TGG - chr8_4:53160144-53160163 None:intergenic 30.0%
ATTGTATGGTATGCTCAAAT+TGG - chr8_4:53160185-53160204 None:intergenic 30.0%
AATTTGAGCATACCATACAA+TGG + chr8_4:53160184-53160203 Msa1333110:intron 30.0%
ATGGAAAATTGTCCATTGTA+TGG - chr8_4:53160199-53160218 None:intergenic 30.0%
TGAATTCAAACCACTTCAAA+TGG - chr8_4:53160218-53160237 None:intergenic 30.0%
AAGTGGTTTGAATTCATGTT+TGG + chr8_4:53160222-53160241 Msa1333110:intron 30.0%
TTTCCATTATCAGATTACTG+AGG + chr8_4:53160317-53160336 Msa1333110:intron 30.0%
TGTACTTGATAAGACCAAAA+AGG + chr8_4:53160482-53160501 Msa1333110:CDS 30.0%
TAAGGAAGAAAATAAAGGAC+TGG + chr8_4:53160518-53160537 Msa1333110:CDS 30.0%
TTCAAACCAGTATTTGGATA+AGG + chr8_4:53160569-53160588 Msa1333110:CDS 30.0%
ATACCTTGGCGAATTATTTA+TGG + chr8_4:53160725-53160744 Msa1333110:three_prime_UTR 30.0%
AAACCATAAATAATTCGCCA+AGG - chr8_4:53160731-53160750 None:intergenic 30.0%
!! AAAGATTTTGATCACATCAG+TGG + chr8_4:53160809-53160828 Msa1333110:three_prime_UTR 30.0%
!! AAGATTTTGATCACATCAGT+GGG + chr8_4:53160810-53160829 Msa1333110:three_prime_UTR 30.0%
!!! TCTTTTTGAGGTTCAAGATT+TGG + chr8_4:53160840-53160859 Msa1333110:three_prime_UTR 30.0%
TTAATATGGATGAGGAAAAC+AGG + chr8_4:53160886-53160905 Msa1333110:three_prime_UTR 30.0%
CAAAATGATTCTTGTAAGCT+AGG - chr8_4:53161009-53161028 None:intergenic 30.0%
TGAAAAAGGAGTAAAAGAGG+TGG - chr8_4:53158995-53159014 None:intergenic 35.0%
! TTTCATGCTAGTTGTTGCTT+TGG + chr8_4:53159048-53159067 Msa1333110:intron 35.0%
! GTGGTTTTTGCAGTAGATTT+AGG - chr8_4:53159357-53159376 None:intergenic 35.0%
CACATCAAAGAAGAGATCTT+CGG + chr8_4:53159374-53159393 Msa1333110:CDS 35.0%
! GTAGAACTGGATGTCTTATT+TGG + chr8_4:53159496-53159515 Msa1333110:intron 35.0%
! GTCCTATGTCACAATTTTCT+TGG - chr8_4:53159873-53159892 None:intergenic 35.0%
AGAAAATTGTGACATAGGAC+TGG + chr8_4:53159873-53159892 Msa1333110:intron 35.0%
AACAAATCGTCATTGTTCTG+CGG + chr8_4:53159982-53160001 Msa1333110:intron 35.0%
TATGGTATGCTCAAATTGGT+TGG - chr8_4:53160181-53160200 None:intergenic 35.0%
! GGACAATTTTCCATTTGAAG+TGG + chr8_4:53160205-53160224 Msa1333110:intron 35.0%
GAACCTCAGTAATCTGATAA+TGG - chr8_4:53160323-53160342 None:intergenic 35.0%
TTGATAAGACCAAAAAGGAC+TGG + chr8_4:53160487-53160506 Msa1333110:CDS 35.0%
TGATAAGACCAAAAAGGACT+GGG + chr8_4:53160488-53160507 Msa1333110:CDS 35.0%
GAAGAGTTCAAACCAGTATT+TGG + chr8_4:53160563-53160582 Msa1333110:CDS 35.0%
AGGAAACCTTATCCAAATAC+TGG - chr8_4:53160578-53160597 None:intergenic 35.0%
AAATGAAGGCAGTTGAAGTA+TGG + chr8_4:53160697-53160716 Msa1333110:exon 35.0%
!! GTTTATTATCTTGGTGTTCC+TGG + chr8_4:53160759-53160778 Msa1333110:three_prime_UTR 35.0%
!!! AAATGTTTTGGCTTCTGAAG+AGG + chr8_4:53160782-53160801 Msa1333110:three_prime_UTR 35.0%
TGGAATGCTTTCAAATGACA+TGG + chr8_4:53160860-53160879 Msa1333110:three_prime_UTR 35.0%
CATGGTACTTAATATGGATG+AGG + chr8_4:53160878-53160897 Msa1333110:three_prime_UTR 35.0%
GTATATTCATCGATCTCTTC+TGG - chr8_4:53161127-53161146 None:intergenic 35.0%
TGAAAAAGGAGTAAAAGAGG+TGG - chr8_4:53158995-53159014 None:intergenic 35.0%
! TTTCATGCTAGTTGTTGCTT+TGG + chr8_4:53159048-53159067 Msa1333110:intron 35.0%
! GTGGTTTTTGCAGTAGATTT+AGG - chr8_4:53159357-53159376 None:intergenic 35.0%
CACATCAAAGAAGAGATCTT+CGG + chr8_4:53159374-53159393 Msa1333110:CDS 35.0%
! GTAGAACTGGATGTCTTATT+TGG + chr8_4:53159496-53159515 Msa1333110:intron 35.0%
! GTCCTATGTCACAATTTTCT+TGG - chr8_4:53159873-53159892 None:intergenic 35.0%
AGAAAATTGTGACATAGGAC+TGG + chr8_4:53159873-53159892 Msa1333110:intron 35.0%
AACAAATCGTCATTGTTCTG+CGG + chr8_4:53159982-53160001 Msa1333110:intron 35.0%
TATGGTATGCTCAAATTGGT+TGG - chr8_4:53160181-53160200 None:intergenic 35.0%
! GGACAATTTTCCATTTGAAG+TGG + chr8_4:53160205-53160224 Msa1333110:intron 35.0%
GAACCTCAGTAATCTGATAA+TGG - chr8_4:53160323-53160342 None:intergenic 35.0%
TTGATAAGACCAAAAAGGAC+TGG + chr8_4:53160487-53160506 Msa1333110:CDS 35.0%
TGATAAGACCAAAAAGGACT+GGG + chr8_4:53160488-53160507 Msa1333110:CDS 35.0%
GAAGAGTTCAAACCAGTATT+TGG + chr8_4:53160563-53160582 Msa1333110:CDS 35.0%
AGGAAACCTTATCCAAATAC+TGG - chr8_4:53160578-53160597 None:intergenic 35.0%
AAATGAAGGCAGTTGAAGTA+TGG + chr8_4:53160697-53160716 Msa1333110:exon 35.0%
!! GTTTATTATCTTGGTGTTCC+TGG + chr8_4:53160759-53160778 Msa1333110:three_prime_UTR 35.0%
!!! AAATGTTTTGGCTTCTGAAG+AGG + chr8_4:53160782-53160801 Msa1333110:three_prime_UTR 35.0%
TGGAATGCTTTCAAATGACA+TGG + chr8_4:53160860-53160879 Msa1333110:three_prime_UTR 35.0%
CATGGTACTTAATATGGATG+AGG + chr8_4:53160878-53160897 Msa1333110:three_prime_UTR 35.0%
GTATATTCATCGATCTCTTC+TGG - chr8_4:53161127-53161146 None:intergenic 35.0%
!!! TAACATCCTGTTTTGGTTCC+AGG - chr8_4:53159155-53159174 None:intergenic 40.0%
GAACCAAAACAGGATGTTAC+TGG + chr8_4:53159156-53159175 Msa1333110:CDS 40.0%
! TCACCAGTAACATCCTGTTT+TGG - chr8_4:53159162-53159181 None:intergenic 40.0%
AAAACAGGATGTTACTGGTG+AGG + chr8_4:53159161-53159180 Msa1333110:intron 40.0%
AAACAGGATGTTACTGGTGA+GGG + chr8_4:53159162-53159181 Msa1333110:intron 40.0%
!! AAGCTCAAGTTGATGCCATA+TGG + chr8_4:53159277-53159296 Msa1333110:CDS 40.0%
!! AGCTCAAGTTGATGCCATAT+GGG + chr8_4:53159278-53159297 Msa1333110:CDS 40.0%
CGAAGATCTCTTCTTTGATG+TGG - chr8_4:53159376-53159395 None:intergenic 40.0%
!! CTGGATGTCTTATTTGGGAT+TGG + chr8_4:53159502-53159521 Msa1333110:CDS 40.0%
! CTGACTAAAAATAGGAGCAC+TGG - chr8_4:53159709-53159728 None:intergenic 40.0%
!!! CAGTGCTCCTATTTTTAGTC+AGG + chr8_4:53159707-53159726 Msa1333110:intron 40.0%
GGGAAAAACCTTGTGCATTT+AGG + chr8_4:53159748-53159767 Msa1333110:intron 40.0%
ACCTTGTGCATTTAGGCAAT+AGG + chr8_4:53159755-53159774 Msa1333110:intron 40.0%
CCTTGTGCATTTAGGCAATA+GGG + chr8_4:53159756-53159775 Msa1333110:intron 40.0%
GCAACCCTGTTATAACATAG+TGG + chr8_4:53159953-53159972 Msa1333110:intron 40.0%
ATGTTGTCAATTGCGGATCA+CGG - chr8_4:53160087-53160106 None:intergenic 40.0%
TGATCCGCAATTGACAACAT+TGG + chr8_4:53160087-53160106 Msa1333110:intron 40.0%
GGAACCAATGTTGTCAATTG+CGG - chr8_4:53160094-53160113 None:intergenic 40.0%
GCTTGTGGATTCTGATTCAA+AGG + chr8_4:53160377-53160396 Msa1333110:CDS 40.0%
TGTGGATTCTGATTCAAAGG+AGG + chr8_4:53160380-53160399 Msa1333110:CDS 40.0%
GATAAGACCAAAAAGGACTG+GGG + chr8_4:53160489-53160508 Msa1333110:CDS 40.0%
! AAATTCTCCCCAGTCCTTTT+TGG - chr8_4:53160499-53160518 None:intergenic 40.0%
AAAGGACTGGGGAGAATTTA+AGG + chr8_4:53160500-53160519 Msa1333110:CDS 40.0%
GTAATCTGTTCGCTGCAAAA+AGG - chr8_4:53160598-53160617 None:intergenic 40.0%
AGACGACGCTGTATAAATGA+AGG + chr8_4:53160683-53160702 Msa1333110:exon 40.0%
!! GAAGTATGGAGTTGATACCT+TGG + chr8_4:53160711-53160730 Msa1333110:three_prime_UTR 40.0%
! TGGTGTTCCTGGAAATGTTT+TGG + chr8_4:53160770-53160789 Msa1333110:three_prime_UTR 40.0%
TCAGAAGCCAAAACATTTCC+AGG - chr8_4:53160780-53160799 None:intergenic 40.0%
! GTGGGTGATGATTCTTTTTG+AGG + chr8_4:53160828-53160847 Msa1333110:three_prime_UTR 40.0%
TGTGAATGACATGTTCTCTG+AGG - chr8_4:53160973-53160992 None:intergenic 40.0%
!!! TAACATCCTGTTTTGGTTCC+AGG - chr8_4:53159155-53159174 None:intergenic 40.0%
GAACCAAAACAGGATGTTAC+TGG + chr8_4:53159156-53159175 Msa1333110:CDS 40.0%
! TCACCAGTAACATCCTGTTT+TGG - chr8_4:53159162-53159181 None:intergenic 40.0%
AAAACAGGATGTTACTGGTG+AGG + chr8_4:53159161-53159180 Msa1333110:intron 40.0%
AAACAGGATGTTACTGGTGA+GGG + chr8_4:53159162-53159181 Msa1333110:intron 40.0%
!! AAGCTCAAGTTGATGCCATA+TGG + chr8_4:53159277-53159296 Msa1333110:CDS 40.0%
!! AGCTCAAGTTGATGCCATAT+GGG + chr8_4:53159278-53159297 Msa1333110:CDS 40.0%
CGAAGATCTCTTCTTTGATG+TGG - chr8_4:53159376-53159395 None:intergenic 40.0%
!! CTGGATGTCTTATTTGGGAT+TGG + chr8_4:53159502-53159521 Msa1333110:CDS 40.0%
! CTGACTAAAAATAGGAGCAC+TGG - chr8_4:53159709-53159728 None:intergenic 40.0%
!!! CAGTGCTCCTATTTTTAGTC+AGG + chr8_4:53159707-53159726 Msa1333110:intron 40.0%
GGGAAAAACCTTGTGCATTT+AGG + chr8_4:53159748-53159767 Msa1333110:intron 40.0%
ACCTTGTGCATTTAGGCAAT+AGG + chr8_4:53159755-53159774 Msa1333110:intron 40.0%
CCTTGTGCATTTAGGCAATA+GGG + chr8_4:53159756-53159775 Msa1333110:intron 40.0%
GCAACCCTGTTATAACATAG+TGG + chr8_4:53159953-53159972 Msa1333110:intron 40.0%
ATGTTGTCAATTGCGGATCA+CGG - chr8_4:53160087-53160106 None:intergenic 40.0%
TGATCCGCAATTGACAACAT+TGG + chr8_4:53160087-53160106 Msa1333110:intron 40.0%
GGAACCAATGTTGTCAATTG+CGG - chr8_4:53160094-53160113 None:intergenic 40.0%
GCTTGTGGATTCTGATTCAA+AGG + chr8_4:53160377-53160396 Msa1333110:CDS 40.0%
TGTGGATTCTGATTCAAAGG+AGG + chr8_4:53160380-53160399 Msa1333110:CDS 40.0%
GATAAGACCAAAAAGGACTG+GGG + chr8_4:53160489-53160508 Msa1333110:CDS 40.0%
! AAATTCTCCCCAGTCCTTTT+TGG - chr8_4:53160499-53160518 None:intergenic 40.0%
AAAGGACTGGGGAGAATTTA+AGG + chr8_4:53160500-53160519 Msa1333110:CDS 40.0%
GTAATCTGTTCGCTGCAAAA+AGG - chr8_4:53160598-53160617 None:intergenic 40.0%
AGACGACGCTGTATAAATGA+AGG + chr8_4:53160683-53160702 Msa1333110:exon 40.0%
!! GAAGTATGGAGTTGATACCT+TGG + chr8_4:53160711-53160730 Msa1333110:three_prime_UTR 40.0%
! TGGTGTTCCTGGAAATGTTT+TGG + chr8_4:53160770-53160789 Msa1333110:three_prime_UTR 40.0%
TCAGAAGCCAAAACATTTCC+AGG - chr8_4:53160780-53160799 None:intergenic 40.0%
! GTGGGTGATGATTCTTTTTG+AGG + chr8_4:53160828-53160847 Msa1333110:three_prime_UTR 40.0%
TGTGAATGACATGTTCTCTG+AGG - chr8_4:53160973-53160992 None:intergenic 40.0%
TCTGTCAAAGAACCTGTTCC+AGG + chr8_4:53159123-53159142 Msa1333110:CDS 45.0%
CTGTCAAAGAACCTGTTCCA+GGG + chr8_4:53159124-53159143 Msa1333110:CDS 45.0%
TGTCAAAGAACCTGTTCCAG+GGG + chr8_4:53159125-53159144 Msa1333110:CDS 45.0%
CCAGGAGATTCAGTTGTCTT+GGG - chr8_4:53159530-53159549 None:intergenic 45.0%
CCAAGACAACTGAATCTCCT+GGG + chr8_4:53159528-53159547 Msa1333110:CDS 45.0%
AAGGCAGTACAAGTGACGAA+GGG + chr8_4:53159585-53159604 Msa1333110:CDS 45.0%
TTTCGTTTCTGCCTCAAGCA+GGG + chr8_4:53159652-53159671 Msa1333110:CDS 45.0%
! AAGGTTTTTCCCACTTCAGC+TGG - chr8_4:53159740-53159759 None:intergenic 45.0%
CCCTATTGCCTAAATGCACA+AGG - chr8_4:53159759-53159778 None:intergenic 45.0%
TGCATTTAGGCAATAGGGAG+AGG + chr8_4:53159761-53159780 Msa1333110:intron 45.0%
CAATTGCGGATCACGGAAAA+TGG - chr8_4:53160080-53160099 None:intergenic 45.0%
TCTGTCAAAGAACCTGTTCC+AGG + chr8_4:53159123-53159142 Msa1333110:CDS 45.0%
CTGTCAAAGAACCTGTTCCA+GGG + chr8_4:53159124-53159143 Msa1333110:CDS 45.0%
TGTCAAAGAACCTGTTCCAG+GGG + chr8_4:53159125-53159144 Msa1333110:CDS 45.0%
CCAGGAGATTCAGTTGTCTT+GGG - chr8_4:53159530-53159549 None:intergenic 45.0%
CCAAGACAACTGAATCTCCT+GGG + chr8_4:53159528-53159547 Msa1333110:CDS 45.0%
AAGGCAGTACAAGTGACGAA+GGG + chr8_4:53159585-53159604 Msa1333110:CDS 45.0%
TTTCGTTTCTGCCTCAAGCA+GGG + chr8_4:53159652-53159671 Msa1333110:CDS 45.0%
! AAGGTTTTTCCCACTTCAGC+TGG - chr8_4:53159740-53159759 None:intergenic 45.0%
CCCTATTGCCTAAATGCACA+AGG - chr8_4:53159759-53159778 None:intergenic 45.0%
TGCATTTAGGCAATAGGGAG+AGG + chr8_4:53159761-53159780 Msa1333110:intron 45.0%
CAATTGCGGATCACGGAAAA+TGG - chr8_4:53160080-53160099 None:intergenic 45.0%
!! TATATATATAAATATGAAAA+AGG - chr8_4:53159009-53159028 None:intergenic 5.0%
!! TATATATATAAATATGAAAA+AGG - chr8_4:53159009-53159028 None:intergenic 5.0%
!! AAGAGCGCGCAAGGTTTTAC+CGG - chr8_4:53158872-53158891 None:intergenic 50.0%
! GAGAGAAAAAAGAGCGCGCA+AGG - chr8_4:53158881-53158900 None:intergenic 50.0%
GGAAAGCCTGGAACCAAAAC+AGG + chr8_4:53159146-53159165 Msa1333110:CDS 50.0%
CCCAAGACAACTGAATCTCC+TGG + chr8_4:53159527-53159546 Msa1333110:CDS 50.0%
CCCAGGAGATTCAGTTGTCT+TGG - chr8_4:53159531-53159550 None:intergenic 50.0%
TGTGCTCCTCAAAGTGTACC+TGG + chr8_4:53159554-53159573 Msa1333110:CDS 50.0%
AGCACACCAGGTACACTTTG+AGG - chr8_4:53159563-53159582 None:intergenic 50.0%
TCAAAGTGTACCTGGTGTGC+TGG + chr8_4:53159562-53159581 Msa1333110:CDS 50.0%
GAAGGCAGTACAAGTGACGA+AGG + chr8_4:53159584-53159603 Msa1333110:CDS 50.0%
CTTTCGTTTCTGCCTCAAGC+AGG + chr8_4:53159651-53159670 Msa1333110:CDS 50.0%
TTCGTTTCTGCCTCAAGCAG+GGG + chr8_4:53159653-53159672 Msa1333110:CDS 50.0%
AGGTGCTAATCCAGCTGAAG+TGG + chr8_4:53159727-53159746 Msa1333110:intron 50.0%
GGTGCTAATCCAGCTGAAGT+GGG + chr8_4:53159728-53159747 Msa1333110:intron 50.0%
GGATCACGGAAAATGGCAGT+TGG - chr8_4:53160073-53160092 None:intergenic 50.0%
ACTGAGGTTCGAGACTTTGC+TGG + chr8_4:53160333-53160352 Msa1333110:CDS 50.0%
ACCGTGAATTTGAGCGAGAG+AGG + chr8_4:53160616-53160635 Msa1333110:CDS 50.0%
CCCTCTCTCGCTCAAATTCA+CGG - chr8_4:53160620-53160639 None:intergenic 50.0%
CCGTGAATTTGAGCGAGAGA+GGG + chr8_4:53160617-53160636 Msa1333110:CDS 50.0%
CACGATTGGCATTGCAATCC+AGG + chr8_4:53160643-53160662 Msa1333110:CDS 50.0%
TTGCATATCTGGTCGCTTCC+TGG - chr8_4:53160664-53160683 None:intergenic 50.0%
ACAGCGTCGTCTTGCATATC+TGG - chr8_4:53160675-53160694 None:intergenic 50.0%
!! GTTCTCTGAGGCTCACTTCA+TGG - chr8_4:53160961-53160980 None:intergenic 50.0%
! GTTTTACCGGCGGAACTCAT+GGG - chr8_4:53158859-53158878 None:intergenic 50.0%
!! AAGAGCGCGCAAGGTTTTAC+CGG - chr8_4:53158872-53158891 None:intergenic 50.0%
! GAGAGAAAAAAGAGCGCGCA+AGG - chr8_4:53158881-53158900 None:intergenic 50.0%
GGAAAGCCTGGAACCAAAAC+AGG + chr8_4:53159146-53159165 Msa1333110:CDS 50.0%
CCCAAGACAACTGAATCTCC+TGG + chr8_4:53159527-53159546 Msa1333110:CDS 50.0%
CCCAGGAGATTCAGTTGTCT+TGG - chr8_4:53159531-53159550 None:intergenic 50.0%
TGTGCTCCTCAAAGTGTACC+TGG + chr8_4:53159554-53159573 Msa1333110:CDS 50.0%
AGCACACCAGGTACACTTTG+AGG - chr8_4:53159563-53159582 None:intergenic 50.0%
TCAAAGTGTACCTGGTGTGC+TGG + chr8_4:53159562-53159581 Msa1333110:CDS 50.0%
GAAGGCAGTACAAGTGACGA+AGG + chr8_4:53159584-53159603 Msa1333110:CDS 50.0%
CTTTCGTTTCTGCCTCAAGC+AGG + chr8_4:53159651-53159670 Msa1333110:CDS 50.0%
TTCGTTTCTGCCTCAAGCAG+GGG + chr8_4:53159653-53159672 Msa1333110:CDS 50.0%
AGGTGCTAATCCAGCTGAAG+TGG + chr8_4:53159727-53159746 Msa1333110:intron 50.0%
GGTGCTAATCCAGCTGAAGT+GGG + chr8_4:53159728-53159747 Msa1333110:intron 50.0%
GGATCACGGAAAATGGCAGT+TGG - chr8_4:53160073-53160092 None:intergenic 50.0%
ACTGAGGTTCGAGACTTTGC+TGG + chr8_4:53160333-53160352 Msa1333110:CDS 50.0%
ACCGTGAATTTGAGCGAGAG+AGG + chr8_4:53160616-53160635 Msa1333110:CDS 50.0%
CCCTCTCTCGCTCAAATTCA+CGG - chr8_4:53160620-53160639 None:intergenic 50.0%
CCGTGAATTTGAGCGAGAGA+GGG + chr8_4:53160617-53160636 Msa1333110:CDS 50.0%
CACGATTGGCATTGCAATCC+AGG + chr8_4:53160643-53160662 Msa1333110:CDS 50.0%
TTGCATATCTGGTCGCTTCC+TGG - chr8_4:53160664-53160683 None:intergenic 50.0%
ACAGCGTCGTCTTGCATATC+TGG - chr8_4:53160675-53160694 None:intergenic 50.0%
!! GTTCTCTGAGGCTCACTTCA+TGG - chr8_4:53160961-53160980 None:intergenic 50.0%
! TTTGGTTCCAGGCTTTCCCC+TGG - chr8_4:53159144-53159163 None:intergenic 55.0%
AGTGTACCTGGTGTGCTGGA+AGG + chr8_4:53159566-53159585 Msa1333110:CDS 55.0%
TCGTTTCTGCCTCAAGCAGG+GGG + chr8_4:53159654-53159673 Msa1333110:CDS 55.0%
CACAACTTTCCCCCTGCTTG+AGG - chr8_4:53159666-53159685 None:intergenic 55.0%
CTCAAGCAGGGGGAAAGTTG+TGG + chr8_4:53159664-53159683 Msa1333110:CDS 55.0%
! AGCAGAAGGTGCAGGAGCTT+TGG - chr8_4:53160418-53160437 None:intergenic 55.0%
AGGACAGCATCCACAGCAGA+AGG - chr8_4:53160432-53160451 None:intergenic 55.0%
! GGTTTTACCGGCGGAACTCA+TGG - chr8_4:53158860-53158879 None:intergenic 55.0%
! TTTGGTTCCAGGCTTTCCCC+TGG - chr8_4:53159144-53159163 None:intergenic 55.0%
AGTGTACCTGGTGTGCTGGA+AGG + chr8_4:53159566-53159585 Msa1333110:CDS 55.0%
TCGTTTCTGCCTCAAGCAGG+GGG + chr8_4:53159654-53159673 Msa1333110:CDS 55.0%
CACAACTTTCCCCCTGCTTG+AGG - chr8_4:53159666-53159685 None:intergenic 55.0%
CTCAAGCAGGGGGAAAGTTG+TGG + chr8_4:53159664-53159683 Msa1333110:CDS 55.0%
! AGCAGAAGGTGCAGGAGCTT+TGG - chr8_4:53160418-53160437 None:intergenic 55.0%
AGGACAGCATCCACAGCAGA+AGG - chr8_4:53160432-53160451 None:intergenic 55.0%
! AGCGCGCAAGGTTTTACCGG+CGG - chr8_4:53158869-53158888 None:intergenic 60.0%
ACCTGTTCCAGGGGAAAGCC+TGG + chr8_4:53159134-53159153 Msa1333110:CDS 60.0%
TCCAGGCTTTCCCCTGGAAC+AGG - chr8_4:53159138-53159157 None:intergenic 60.0%
! CTTTGAGGAGCACACTGCCC+AGG - chr8_4:53159548-53159567 None:intergenic 60.0%
GTACTGCCTTCCAGCACACC+AGG - chr8_4:53159575-53159594 None:intergenic 60.0%
TGCTGCTGCTGCTCTTGCAG+CGG + chr8_4:53159616-53159635 Msa1333110:CDS 60.0%
AGCTCCTGCACCTTCTGCTG+TGG + chr8_4:53160419-53160438 Msa1333110:CDS 60.0%
! GCATCCACAGCAGAAGGTGC+AGG - chr8_4:53160426-53160445 None:intergenic 60.0%
GCGAGAGAGGGATGCACGAT+TGG + chr8_4:53160629-53160648 Msa1333110:CDS 60.0%
! AGCGCGCAAGGTTTTACCGG+CGG - chr8_4:53158869-53158888 None:intergenic 60.0%
ACCTGTTCCAGGGGAAAGCC+TGG + chr8_4:53159134-53159153 Msa1333110:CDS 60.0%
TCCAGGCTTTCCCCTGGAAC+AGG - chr8_4:53159138-53159157 None:intergenic 60.0%
! CTTTGAGGAGCACACTGCCC+AGG - chr8_4:53159548-53159567 None:intergenic 60.0%
GTACTGCCTTCCAGCACACC+AGG - chr8_4:53159575-53159594 None:intergenic 60.0%
TGCTGCTGCTGCTCTTGCAG+CGG + chr8_4:53159616-53159635 Msa1333110:CDS 60.0%
AGCTCCTGCACCTTCTGCTG+TGG + chr8_4:53160419-53160438 Msa1333110:CDS 60.0%
! GCATCCACAGCAGAAGGTGC+AGG - chr8_4:53160426-53160445 None:intergenic 60.0%
GCGAGAGAGGGATGCACGAT+TGG + chr8_4:53160629-53160648 Msa1333110:CDS 60.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 53158859 53161169 53158859 ID=Msa1333110;Name=Msa1333110
chr8_4 mRNA 53158859 53161169 53158859 ID=Msa1333110-mRNA-1;Parent=Msa1333110;Name=Msa1333110-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0.75|0.6|0.8|1|1|5|471|257
chr8_4 exon 53158859 53158871 53158859 ID=Msa1333110-mRNA-1:exon:16181;Parent=Msa1333110-mRNA-1
chr8_4 exon 53159097 53159177 53159097 ID=Msa1333110-mRNA-1:exon:16182;Parent=Msa1333110-mRNA-1
chr8_4 exon 53159271 53159395 53159271 ID=Msa1333110-mRNA-1:exon:16183;Parent=Msa1333110-mRNA-1
chr8_4 exon 53159500 53159685 53159500 ID=Msa1333110-mRNA-1:exon:16184;Parent=Msa1333110-mRNA-1
chr8_4 exon 53160330 53161169 53160330 ID=Msa1333110-mRNA-1:exon:16185;Parent=Msa1333110-mRNA-1
chr8_4 CDS 53158859 53158871 53158859 ID=Msa1333110-mRNA-1:cds;Parent=Msa1333110-mRNA-1
chr8_4 CDS 53159097 53159177 53159097 ID=Msa1333110-mRNA-1:cds;Parent=Msa1333110-mRNA-1
chr8_4 CDS 53159271 53159395 53159271 ID=Msa1333110-mRNA-1:cds;Parent=Msa1333110-mRNA-1
chr8_4 CDS 53159500 53159685 53159500 ID=Msa1333110-mRNA-1:cds;Parent=Msa1333110-mRNA-1
chr8_4 CDS 53160330 53160698 53160330 ID=Msa1333110-mRNA-1:cds;Parent=Msa1333110-mRNA-1
chr8_4 three_prime_UTR 53160699 53161169 53160699 ID=Msa1333110-mRNA-1:three_prime_utr;Parent=Msa1333110-mRNA-1
Gene Sequence

>Msa1333110

ATGAGTTCCGCCGATACAATCAATGGAAATTCTGCAAAATCTGTCAAAGAACCTGTTCCAGGGGAAAGCCTGGAACCAAAACAGGATGTTACTGAAGTAAAAGCTCAAGTTGATGCCATATGGGAACAAATGAATAAAGGAGTGTCCAATAAAGTTATTAGCAGTTTTAAAAGCAAGCCTAAATCTACTGCAAAAACCACATCAAAGAAGAGATCTTCGAACTGGATGTCTTATTTGGGATTGGCGCCCAAGACAACTGAATCTCCTGGGCAGTGTGCTCCTCAAAGTGTACCTGGTGTGCTGGAAGGCAGTACAAGTGACGAAGGGAAGAAGTTTGCTGCTGCTGCTCTTGCAGCGGTGAAAGACGATGCTTTCGTTTCTGCCTCAAGCAGGGGGAAAGTTGTGATTACTGAGGTTCGAGACTTTGCTGGTAAAGAAATTGAATATAAAAAGCTTGTGGATTCTGATTCAAAGGAGGCAATTGAAAGAGCCAAAGCTCCTGCACCTTCTGCTGTGGATGCTGTCCTTGAACAAATCAAGAAGAAAACAAAGCTCAGTGTACTTGATAAGACCAAAAAGGACTGGGGAGAATTTAAGGAAGAAAATAAAGGACTGGAAAATGAGCTTGATACTTACAAGAAGAGTTCAAACCAGTATTTGGATAAGGTTTCCTTTTTGCAGCGAACAGATTACCGTGAATTTGAGCGAGAGAGGGATGCACGATTGGCATTGCAATCCAGGAAGCGACCAGATATGCAAGACGACGCTGTATAA

Protein sequence

>Msa1333110

MSSADTINGNSAKSVKEPVPGESLEPKQDVTEVKAQVDAIWEQMNKGVSNKVISSFKSKPKSTAKTTSKKRSSNWMSYLGLAPKTTESPGQCAPQSVPGVLEGSTSDEGKKFAAAALAAVKDDAFVSASSRGKVVITEVRDFAGKEIEYKKLVDSDSKEAIERAKAPAPSAVDAVLEQIKKKTKLSVLDKTKKDWGEFKEENKGLENELDTYKKSSNQYLDKVSFLQRTDYREFERERDARLALQSRKRPDMQDDAV*