AlfalfaGEDB | Msa0670270

M. sativa cultivar zhongmu-4 / Msa0670270

KEGG: K00213
GO: -
PFAM: PF08555.13

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0670270	XP_013454497.1	98.529	136	2	0	1	136	1	136	1.22e-92	274

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0670270	A0A072UHD3	98.529	136	2	0	1	136	1	136	5.82e-93	274

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0000490	Msa0670270	-0.814633	1.395120e-51	-8.615850e-47
Msa0008410	Msa0670270	0.807628	4.605294e-50	-8.615850e-47
Msa0013050	Msa0670270	-0.835121	2.017933e-56	-8.615850e-47
Msa0023830	Msa0670270	-0.811421	7.061969e-51	-8.615850e-47
Msa0025730	Msa0670270	0.822953	1.797722e-53	-8.615850e-47
Msa0028660	Msa0670270	0.806548	7.797433e-50	-8.615850e-47
Msa0030310	Msa0670270	0.810967	8.856534e-51	-8.615850e-47
Msa0030380	Msa0670270	0.807005	6.244559e-50	-8.615850e-47
Msa0032260	Msa0670270	0.830514	2.814065e-55	-8.615850e-47
Msa0043170	Msa0670270	0.805413	1.351379e-49	-8.615850e-47
Msa0044710	Msa0670270	0.823357	1.446882e-53	-8.615850e-47
Msa0057140	Msa0670270	0.838642	2.547270e-57	-8.615850e-47
Msa0081230	Msa0670270	0.806645	7.439795e-50	-8.615850e-47
Msa0084940	Msa0670270	0.821442	4.028576e-53	-8.615850e-47
Msa0085360	Msa0670270	-0.823464	1.365823e-53	-8.615850e-47
Msa0087290	Msa0670270	0.821087	4.866008e-53	-8.615850e-47
Msa0094920	Msa0670270	0.827024	1.965260e-54	-8.615850e-47
Msa0095010	Msa0670270	0.977280	1.822491e-143	-8.615850e-47
Msa0095380	Msa0670270	0.813439	2.557998e-51	-8.615850e-47
Msa0104290	Msa0670270	0.811139	8.128172e-51	-8.615850e-47
Msa0115390	Msa0670270	0.807318	5.359595e-50	-8.615850e-47
Msa0610370	Msa0670270	0.803659	3.137084e-49	-8.615850e-47
Msa0610390	Msa0670270	0.804871	1.753954e-49	-8.615850e-47
Msa0618010	Msa0670270	0.830177	3.401775e-55	-8.615850e-47
Msa0619070	Msa0670270	0.859371	4.331334e-63	-8.615850e-47
Msa0623700	Msa0670270	0.809856	1.538506e-50	-8.615850e-47
Msa0623860	Msa0670270	0.803658	3.139041e-49	-8.615850e-47
Msa0625280	Msa0670270	0.980018	2.921258e-149	-8.615850e-47
Msa0638280	Msa0670270	0.800893	1.163782e-48	-8.615850e-47
Msa0638320	Msa0670270	0.812413	4.292375e-51	-8.615850e-47
Msa0647380	Msa0670270	0.807774	4.288285e-50	-8.615850e-47
Msa0650920	Msa0670270	0.815830	7.559404e-52	-8.615850e-47
Msa0663900	Msa0670270	0.821469	3.971352e-53	-8.615850e-47
Msa0669850	Msa0670270	0.842780	2.098307e-58	-8.615850e-47
Msa0670270	Msa0677270	0.810286	1.243227e-50	-8.615850e-47
Msa0670270	Msa0687630	0.806193	9.266381e-50	-8.615850e-47
Msa0670270	Msa0690250	0.804422	2.176860e-49	-8.615850e-47
Msa0670270	Msa0692840	0.807908	4.017551e-50	-8.615850e-47
Msa0670270	Msa0692940	0.822309	2.538040e-53	-8.615850e-47
Msa0670270	Msa0698060	0.804334	2.271108e-49	-8.615850e-47
Msa0670270	Msa0709500	0.833546	5.013169e-56	-8.615850e-47
Msa0670270	Msa0711490	0.809184	2.145535e-50	-8.615850e-47
Msa0670270	Msa0712310	0.811045	8.519925e-51	-8.615850e-47
Msa0670270	Msa0718740	0.827319	1.670735e-54	-8.615850e-47
Msa0670270	Msa0726830	0.833441	5.324963e-56	-8.615850e-47
Msa0670270	Msa0734660	0.814861	1.242045e-51	-8.615850e-47
Msa0670270	Msa0735310	0.808931	2.429789e-50	-8.615850e-47
Msa0670270	Msa0743260	0.810509	1.112717e-50	-8.615850e-47
Msa0670270	Msa0771720	0.800236	1.584269e-48	-8.615850e-47
Msa0670270	Msa0776220	0.817282	3.575211e-52	-8.615850e-47
Msa0670270	Msa0782490	0.817012	4.111226e-52	-8.615850e-47
Msa0670270	Msa0790390	-0.820792	5.686921e-53	-8.615850e-47
Msa0670270	Msa0790850	0.837199	5.983404e-57	-8.615850e-47
Msa0670270	Msa0792090	0.815212	1.038102e-51	-8.615850e-47
Msa0670270	Msa0795030	0.812372	4.383568e-51	-8.615850e-47
Msa0670270	Msa0798440	0.808848	2.532025e-50	-8.615850e-47
Msa0670270	Msa0802410	0.809503	1.832132e-50	-8.615850e-47
Msa0670270	Msa0806920	0.809930	1.482879e-50	-8.615850e-47
Msa0670270	Msa0813670	0.803540	3.320799e-49	-8.615850e-47
Msa0670270	Msa0813720	0.827884	1.222576e-54	-8.615850e-47
Msa0670270	Msa0814250	0.813932	1.992619e-51	-8.615850e-47
Msa0670270	Msa0814320	0.818859	1.573446e-52	-8.615850e-47
Msa0670270	Msa0830990	0.814717	1.336388e-51	-8.615850e-47
Msa0670270	Msa0831870	0.843615	1.256554e-58	-8.615850e-47
Msa0670270	Msa0833310	0.833241	5.971669e-56	-8.615850e-47
Msa0670270	Msa0842830	0.852940	3.318345e-61	-8.615850e-47
Msa0670270	Msa0860080	0.809711	1.653440e-50	-8.615850e-47
Msa0670270	Msa0874500	0.815389	9.477927e-52	-8.615850e-47
Msa0670270	Msa0876580	0.803871	2.834200e-49	-8.615850e-47
Msa0670270	Msa0899230	0.805605	1.231478e-49	-8.615850e-47
Msa0670270	Msa0900630	0.804214	2.404787e-49	-8.615850e-47
Msa0670270	Msa0905380	0.814089	1.839441e-51	-8.615850e-47
Msa0670270	Msa0909000	-0.824154	9.414276e-54	-8.615850e-47
Msa0670270	Msa0926460	0.803765	2.981647e-49	-8.615850e-47
Msa0670270	Msa0937240	0.813714	2.225794e-51	-8.615850e-47
Msa0670270	Msa0965860	0.801425	9.059352e-49	-8.615850e-47
Msa0670270	Msa0971020	0.841125	5.742934e-58	-8.615850e-47
Msa0670270	Msa0974530	0.824355	8.444084e-54	-8.615850e-47
Msa0670270	Msa0974810	0.840524	8.258677e-58	-8.615850e-47
Msa0670270	Msa1012370	0.806045	9.955503e-50	-8.615850e-47
Msa0670270	Msa1013040	0.816525	5.286541e-52	-8.615850e-47
Msa0670270	Msa1026760	0.805272	1.445955e-49	-8.615850e-47
Msa0670270	Msa1026790	0.802544	5.334915e-49	-8.615850e-47
Msa0670270	Msa1039880	0.805659	1.199686e-49	-8.615850e-47
Msa0670270	Msa1040890	0.823892	1.084223e-53	-8.615850e-47
Msa0670270	Msa1046300	0.803787	2.950904e-49	-8.615850e-47
Msa0670270	Msa1053260	0.804213	2.406205e-49	-8.615850e-47
Msa0670270	Msa1072460	-0.819535	1.103587e-52	-8.615850e-47
Msa0670270	Msa1084470	0.854325	1.327210e-61	-8.615850e-47
Msa0670270	Msa1089840	0.814527	1.472415e-51	-8.615850e-47
Msa0670270	Msa1091530	0.826497	2.625764e-54	-8.615850e-47
Msa0670270	Msa1096230	0.806977	6.330177e-50	-8.615850e-47
Msa0670270	Msa1101580	0.808229	3.432296e-50	-8.615850e-47
Msa0670270	Msa1126120	-0.815082	1.108957e-51	-8.615850e-47
Msa0670270	Msa1126770	0.803286	3.747833e-49	-8.615850e-47
Msa0670270	Msa1127830	0.813661	2.286329e-51	-8.615850e-47
Msa0670270	Msa1130210	-0.807909	4.015073e-50	-8.615850e-47
Msa0670270	Msa1134110	0.803612	3.207873e-49	-8.615850e-47
Msa0670270	Msa1138900	-0.800352	1.500375e-48	-8.615850e-47
Msa0670270	Msa1143840	0.816774	4.649586e-52	-8.615850e-47
Msa0670270	Msa1166010	0.800874	1.174172e-48	-8.615850e-47
Msa0670270	Msa1171360	0.833015	6.798301e-56	-8.615850e-47
Msa0670270	Msa1171870	0.835066	2.082992e-56	-8.615850e-47
Msa0670270	Msa1187520	0.821358	4.213139e-53	-8.615850e-47
Msa0670270	Msa1193950	-0.802573	5.261403e-49	-8.615850e-47
Msa0670270	Msa1207270	0.804232	2.384626e-49	-8.615850e-47
Msa0670270	Msa1217430	-0.811923	5.490540e-51	-8.615850e-47
Msa0670270	Msa1217830	0.829561	4.804343e-55	-8.615850e-47
Msa0670270	Msa1217860	0.817019	4.096559e-52	-8.615850e-47
Msa0670270	Msa1233500	0.801673	8.058450e-49	-8.615850e-47
Msa0670270	Msa1236070	-0.806829	6.801092e-50	-8.615850e-47
Msa0670270	Msa1236640	-0.802237	6.172209e-49	-8.615850e-47
Msa0670270	Msa1237030	0.809781	1.596989e-50	-8.615850e-47
Msa0670270	Msa1253800	0.825343	4.937169e-54	-8.615850e-47
Msa0670270	Msa1254510	0.807284	5.449439e-50	-8.615850e-47
Msa0670270	Msa1254710	0.800970	1.122616e-48	-8.615850e-47
Msa0670270	Msa1255040	-0.807900	4.032449e-50	-8.615850e-47
Msa0670270	Msa1267260	0.831027	2.106581e-55	-8.615850e-47
Msa0670270	Msa1269300	0.817238	3.657215e-52	-8.615850e-47
Msa0670270	Msa1269580	-0.802866	4.578367e-49	-8.615850e-47
Msa0670270	Msa1275360	0.802042	6.767163e-49	-8.615850e-47
Msa0670270	Msa1276190	0.805155	1.529941e-49	-8.615850e-47
Msa0670270	Msa1282920	0.811805	5.825296e-51	-8.615850e-47
Msa0670270	Msa1290190	0.804115	2.521835e-49	-8.615850e-47
Msa0670270	Msa1300350	-0.801701	7.953953e-49	-8.615850e-47
Msa0670270	Msa1302190	-0.808287	3.336008e-50	-8.615850e-47
Msa0670270	Msa1306430	0.837050	6.532994e-57	-8.615850e-47
Msa0670270	Msa1322190	0.803154	3.990560e-49	-8.615850e-47
Msa0670270	Msa1335940	0.829436	5.152887e-55	-8.615850e-47
Msa0670270	Msa1341070	0.805576	1.248865e-49	-8.615850e-47
Msa0670270	Msa1355700	0.800446	1.435776e-48	-8.615850e-47
Msa0670270	Msa1362880	0.825564	4.377269e-54	-8.615850e-47
Msa0670270	Msa1382410	0.806039	9.982697e-50	-8.615850e-47
Msa0670270	Msa1397810	0.806744	7.088348e-50	-8.615850e-47
Msa0670270	Msa1403580	-0.830111	3.529449e-55	-8.615850e-47
Msa0670270	Msa1403930	-0.821331	4.272720e-53	-8.615850e-47
Msa0670270	Msa1404190	0.814494	1.497186e-51	-8.615850e-47
Msa0670270	Msa1412930	-0.820083	8.271470e-53	-8.615850e-47
Msa0670270	Msa1429360	-0.800990	1.112209e-48	-8.615850e-47
Msa0670270	Msa1438700	0.804946	1.691930e-49	-8.615850e-47
Msa0670270	Msa1439960	0.822986	1.766040e-53	-8.615850e-47
Msa0670270	Msa1440000	0.825814	3.817525e-54	-8.615850e-47
Msa0670270	Msa1443290	-0.816394	5.657731e-52	-8.615850e-47
Msa0670270	Msa1444310	0.804161	2.467285e-49	-8.615850e-47
Msa0670270	Msa1452470	0.811673	6.223540e-51	-8.615850e-47
Msa0670270	Msa1454110	0.800760	1.239186e-48	-8.615850e-47
Msa0670270	Msa1460470	0.808138	3.589041e-50	-8.615850e-47
Msa0670270	Msa1461280	0.810100	1.363123e-50	-8.615850e-47
Msa0670270	Msa1465960	0.843840	1.093879e-58	-8.615850e-47
Msa0127310	Msa0670270	0.814336	1.623058e-51	-8.615850e-47
Msa0136390	Msa0670270	0.805401	1.359046e-49	-8.615850e-47
Msa0137040	Msa0670270	0.814922	1.203958e-51	-8.615850e-47
Msa0145520	Msa0670270	0.800308	1.531706e-48	-8.615850e-47
Msa0148120	Msa0670270	0.814191	1.746517e-51	-8.615850e-47
Msa0155880	Msa0670270	0.805816	1.111811e-49	-8.615850e-47
Msa0156650	Msa0670270	-0.811945	5.430168e-51	-8.615850e-47
Msa0162770	Msa0670270	-0.849243	3.665505e-60	-8.615850e-47
Msa0168640	Msa0670270	-0.813262	2.798475e-51	-8.615850e-47
Msa0173740	Msa0670270	0.815628	8.388137e-52	-8.615850e-47
Msa0173820	Msa0670270	0.808290	3.330091e-50	-8.615850e-47
Msa0173990	Msa0670270	0.812100	5.025226e-51	-8.615850e-47
Msa0177700	Msa0670270	-0.810817	9.543802e-51	-8.615850e-47
Msa0178990	Msa0670270	0.812562	3.983287e-51	-8.615850e-47
Msa0182280	Msa0670270	0.810963	8.873654e-51	-8.615850e-47
Msa0188680	Msa0670270	-0.800900	1.160000e-48	-8.615850e-47
Msa0189520	Msa0670270	0.813759	2.175852e-51	-8.615850e-47
Msa0194480	Msa0670270	0.801499	8.748073e-49	-8.615850e-47
Msa0199690	Msa0670270	0.828233	1.007443e-54	-8.615850e-47
Msa0223290	Msa0670270	0.806254	8.995875e-50	-8.615850e-47
Msa0229490	Msa0670270	-0.808127	3.607272e-50	-8.615850e-47
Msa0231880	Msa0670270	0.805531	1.276524e-49	-8.615850e-47
Msa0236270	Msa0670270	0.809740	1.629896e-50	-8.615850e-47
Msa0236980	Msa0670270	0.813571	2.392767e-51	-8.615850e-47
Msa0238250	Msa0670270	-0.803057	4.179651e-49	-8.615850e-47
Msa0369050	Msa0670270	0.803440	3.483363e-49	-8.615850e-47
Msa0369220	Msa0670270	0.807935	3.964611e-50	-8.615850e-47
Msa0376690	Msa0670270	0.827176	1.807579e-54	-8.615850e-47
Msa0377530	Msa0670270	0.804113	2.523862e-49	-8.615850e-47
Msa0377900	Msa0670270	-0.810232	1.277161e-50	-8.615850e-47
Msa0380040	Msa0670270	0.811266	7.630571e-51	-8.615850e-47
Msa0385580	Msa0670270	0.800855	1.184649e-48	-8.615850e-47
Msa0398950	Msa0670270	0.804561	2.036523e-49	-8.615850e-47
Msa0402330	Msa0670270	0.817765	2.783052e-52	-8.615850e-47
Msa0404000	Msa0670270	0.801330	9.472975e-49	-8.615850e-47
Msa0404030	Msa0670270	0.804831	1.788295e-49	-8.615850e-47
Msa0414950	Msa0670270	-0.812496	4.116811e-51	-8.615850e-47
Msa0419520	Msa0670270	0.804914	1.718449e-49	-8.615850e-47
Msa0419640	Msa0670270	-0.812876	3.400919e-51	-8.615850e-47
Msa0420000	Msa0670270	0.817659	2.940917e-52	-8.615850e-47
Msa0421600	Msa0670270	0.803821	2.903729e-49	-8.615850e-47
Msa0421780	Msa0670270	-0.812437	4.241295e-51	-8.615850e-47
Msa0429290	Msa0670270	0.829403	5.250543e-55	-8.615850e-47
Msa0436280	Msa0670270	-0.801973	6.991709e-49	-8.615850e-47
Msa0446580	Msa0670270	0.806491	8.015692e-50	-8.615850e-47
Msa0467960	Msa0670270	-0.815974	7.023123e-52	-8.615850e-47
Msa0471590	Msa0670270	0.827317	1.672845e-54	-8.615850e-47
Msa0473830	Msa0670270	-0.801771	7.695481e-49	-8.615850e-47
Msa0475580	Msa0670270	0.838015	3.696330e-57	-8.615850e-47
Msa0242680	Msa0670270	0.810471	1.133968e-50	-8.615850e-47
Msa0244270	Msa0670270	0.800695	1.277243e-48	-8.615850e-47
Msa0255080	Msa0670270	0.806118	9.606007e-50	-8.615850e-47
Msa0259370	Msa0670270	0.800412	1.458793e-48	-8.615850e-47
Msa0260210	Msa0670270	0.824479	7.895637e-54	-8.615850e-47
Msa0262310	Msa0670270	0.814686	1.357440e-51	-8.615850e-47
Msa0270220	Msa0670270	-0.817182	3.766160e-52	-8.615850e-47
Msa0271360	Msa0670270	0.809513	1.823573e-50	-8.615850e-47
Msa0280430	Msa0670270	0.807537	4.815537e-50	-8.615850e-47
Msa0280490	Msa0670270	0.813749	2.186272e-51	-8.615850e-47
Msa0288240	Msa0670270	0.800216	1.599620e-48	-8.615850e-47
Msa0291500	Msa0670270	0.800811	1.209817e-48	-8.615850e-47
Msa0291520	Msa0670270	0.813611	2.344706e-51	-8.615850e-47
Msa0295330	Msa0670270	0.802133	6.483825e-49	-8.615850e-47
Msa0302650	Msa0670270	0.803905	2.789092e-49	-8.615850e-47
Msa0304290	Msa0670270	0.829877	4.024211e-55	-8.615850e-47
Msa0304330	Msa0670270	0.830420	2.966000e-55	-8.615850e-47
Msa0307830	Msa0670270	-0.811489	6.825761e-51	-8.615850e-47
Msa0308200	Msa0670270	0.800205	1.607664e-48	-8.615850e-47
Msa0320100	Msa0670270	0.810092	1.368937e-50	-8.615850e-47
Msa0326670	Msa0670270	0.819290	1.255047e-52	-8.615850e-47
Msa0327410	Msa0670270	0.816843	4.487585e-52	-8.615850e-47
Msa0328210	Msa0670270	0.802351	5.846806e-49	-8.615850e-47
Msa0329350	Msa0670270	0.802539	5.347623e-49	-8.615850e-47
Msa0337650	Msa0670270	0.833215	6.060073e-56	-8.615850e-47
Msa0347360	Msa0670270	0.805524	1.280854e-49	-8.615850e-47
Msa0355270	Msa0670270	0.819619	1.056065e-52	-8.615850e-47
Msa0493920	Msa0670270	0.815850	7.483859e-52	-8.615850e-47
Msa0508590	Msa0670270	0.825430	4.708755e-54	-8.615850e-47
Msa0508630	Msa0670270	0.829088	6.260582e-55	-8.615850e-47
Msa0509390	Msa0670270	0.824634	7.258892e-54	-8.615850e-47
Msa0518070	Msa0670270	-0.801364	9.325107e-49	-8.615850e-47
Msa0519220	Msa0670270	0.820481	6.704216e-53	-8.615850e-47
Msa0525340	Msa0670270	0.806159	9.420438e-50	-8.615850e-47
Msa0526890	Msa0670270	0.803952	2.727253e-49	-8.615850e-47
Msa0530850	Msa0670270	0.804767	1.844528e-49	-8.615850e-47
Msa0534900	Msa0670270	0.801562	8.493297e-49	-8.615850e-47
Msa0535030	Msa0670270	0.827353	1.639714e-54	-8.615850e-47
Msa0535060	Msa0670270	0.828394	9.211367e-55	-8.615850e-47
Msa0546360	Msa0670270	0.802548	5.324686e-49	-8.615850e-47
Msa0547140	Msa0670270	0.803704	3.070507e-49	-8.615850e-47
Msa0553220	Msa0670270	-0.827804	1.277777e-54	-8.615850e-47
Msa0555950	Msa0670270	0.818128	2.303896e-52	-8.615850e-47
Msa0568820	Msa0670270	0.855034	8.267809e-62	-8.615850e-47
Msa0579370	Msa0670270	0.814217	1.724116e-51	-8.615850e-47
Msa0581070	Msa0670270	0.805958	1.037908e-49	-8.615850e-47
Msa0590650	Msa0670270	0.821736	3.444922e-53	-8.615850e-47
Msa0590680	Msa0670270	0.823107	1.654871e-53	-8.615850e-47
Msa0591060	Msa0670270	0.823917	1.069585e-53	-8.615850e-47
Msa0591540	Msa0670270	0.805506	1.291872e-49	-8.615850e-47
Msa0591770	Msa0670270	0.831365	1.740083e-55	-8.615850e-47
Msa0601850	Msa0670270	0.801175	1.019202e-48	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0670270	MtrunA17_Chr4g0000361	98.529	136	2	0	1	136	1	136	1.12e-96	274
Msa0670270	MtrunA17_Chr3g0138861	63.014	73	27	0	64	136	1	73	5.41e-31	105

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0670270	AT1G16810.3	61.111	144	48	2	1	136	1	144	5.80e-47	149
Msa0670270	AT1G16810.2	61.111	144	48	2	1	136	1	144	5.80e-47	149
Msa0670270	AT1G16810.1	61.111	144	48	2	1	136	1	144	5.80e-47	149

Find 40 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCATTTACTTCTTGATCATT+AGG	0.263557	4_4:+12685958	None:intergenic
CGCTCATGTTTGCGAGATAT+TGG	0.302036	4_4:+12685779	None:intergenic
AATCACCCAGGACCAACTTT+AGG	0.323685	4_4:+12685742	None:intergenic
GTGAGATTTATTAGAAATCT+TGG	0.347606	4_4:+12685825	None:intergenic
TTTGACTTAGATTCTGTTGA+TGG	0.349817	4_4:-12685574	Msa0670270:three_prime_UTR
CGAGATATTGGTTGAAATCC+TGG	0.357664	4_4:+12685791	None:intergenic
AACCCAAAGAATAACTGAAT+TGG	0.374907	4_4:+12685433	None:intergenic
GCAACTTGATGTTCATAGAT+TGG	0.407231	4_4:-12685848	Msa0670270:CDS
GGAAAAGCATTGGATGTTGC+TGG	0.421175	4_4:-12687019	Msa0670270:CDS
GATATTCCTAAAGTTGGTCC+TGG	0.441241	4_4:-12685748	Msa0670270:CDS
AGAGCTATTGTGCAAGCATA+TGG	0.470832	4_4:+12685652	None:intergenic
ATGATGGGAGTGAATTGAGC+AGG	0.471811	4_4:-12685939	Msa0670270:CDS
CATTATGATATTCCTAAAGT+TGG	0.473152	4_4:-12685754	Msa0670270:CDS
AACAAACAAATACAAATGAC+AGG	0.476276	4_4:+12685686	None:intergenic
AGTTGGTCCTGGGTGATTCA+AGG	0.478909	4_4:-12685737	Msa0670270:exon
AATGATCAAGAAGTAAATGA+TGG	0.482714	4_4:-12685955	Msa0670270:CDS
TCTATGTACCGCCTCTCTGC+TGG	0.489804	4_4:+12685880	None:intergenic
TTGACTTAGATTCTGTTGAT+GGG	0.507882	4_4:-12685573	Msa0670270:three_prime_UTR
ATCTCACCGCGATAGAATCC+AGG	0.518832	4_4:-12685809	Msa0670270:CDS
GAAGCTGAAGGGAAAAGCAT+TGG	0.531649	4_4:-12687029	Msa0670270:CDS
ACTGAAGATGAAATCTCAGC+AGG	0.540124	4_4:-12686938	Msa0670270:intron
AGATGATCATCATAATGAGC+AGG	0.545898	4_4:+12685907	None:intergenic
TCGGCATATGAGAATGTTGT+TGG	0.556165	4_4:-12687061	Msa0670270:CDS
TGATGGGAGTGAATTGAGCA+GGG	0.558875	4_4:-12685938	Msa0670270:CDS
ATGATCAAGAAGTAAATGAT+GGG	0.571574	4_4:-12685954	Msa0670270:CDS
GAGTTGTTCAAGTATGAAGA+AGG	0.582106	4_4:-12685715	Msa0670270:three_prime_UTR
ATATTCCTAAAGTTGGTCCT+GGG	0.598854	4_4:-12685747	Msa0670270:CDS
TCATTGTTGCACAGATATGT+CGG	0.603982	4_4:-12687080	Msa0670270:intron
TGACTTAGATTCTGTTGATG+GGG	0.615060	4_4:-12685572	Msa0670270:three_prime_UTR
GTCTTTCATTCAATTCACAA+AGG	0.615169	4_4:-12687454	Msa0670270:intron
AACAACTCCTTGAATCACCC+AGG	0.629413	4_4:+12685730	None:intergenic
ATCTTACACCAGCAGAGAGG+CGG	0.643614	4_4:-12685888	Msa0670270:CDS
GCATATGAGAATGTTGTTGG+TGG	0.647733	4_4:-12687058	Msa0670270:CDS
ACAAACAAATACAAATGACA+GGG	0.651390	4_4:+12685687	None:intergenic
TGAAATCCTGGATTCTATCG+CGG	0.661087	4_4:+12685803	None:intergenic
TGGTGGTAAACTGAAGCTGA+AGG	0.678860	4_4:-12687041	Msa0670270:CDS
AAAGCATTGGATGTTGCTGG+CGG	0.694873	4_4:-12687016	Msa0670270:CDS
GGTGGTAAACTGAAGCTGAA+GGG	0.696896	4_4:-12687040	Msa0670270:CDS
ATCATCTTACACCAGCAGAG+AGG	0.709383	4_4:-12685891	Msa0670270:CDS
CAAACAAATACAAATGACAG+GGG	0.732012	4_4:+12685688	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATATAAAAATTTCATAGA+AGG	+	chr4_4:12687424-12687443	None:intergenic	10.0%
!!	AAATATAAAAATTTCATAGA+AGG	+	chr4_4:12687424-12687443	None:intergenic	10.0%
!!	TAATAATAAATTCACCAAAA+CGG	+	chr4_4:12685731-12685750	None:intergenic	15.0%
!!!	CATAGTATTATGTTTTAAAA+TGG	-	chr4_4:12686134-12686153	Msa0670270:intron	15.0%
!!	AAAAAAATTATGTTCAAGTA+AGG	+	chr4_4:12686386-12686405	None:intergenic	15.0%
!!!	TTTTTTTACTGAAAATCATA+AGG	-	chr4_4:12686399-12686418	Msa0670270:intron	15.0%
!!!	TTTTTTACTGAAAATCATAA+GGG	-	chr4_4:12686400-12686419	Msa0670270:intron	15.0%
!!!	TCAACAATAAATATCATTTT+CGG	-	chr4_4:12686450-12686469	Msa0670270:intron	15.0%
!!	TAAATATATTGCACAATTTA+TGG	+	chr4_4:12686917-12686936	None:intergenic	15.0%
!!	TAATAATAAATTCACCAAAA+CGG	+	chr4_4:12685731-12685750	None:intergenic	15.0%
!!!	CATAGTATTATGTTTTAAAA+TGG	-	chr4_4:12686134-12686153	Msa0670270:intron	15.0%
!!	AAAAAAATTATGTTCAAGTA+AGG	+	chr4_4:12686386-12686405	None:intergenic	15.0%
!!!	TTTTTTTACTGAAAATCATA+AGG	-	chr4_4:12686399-12686418	Msa0670270:intron	15.0%
!!!	TTTTTTACTGAAAATCATAA+GGG	-	chr4_4:12686400-12686419	Msa0670270:intron	15.0%
!!!	TCAACAATAAATATCATTTT+CGG	-	chr4_4:12686450-12686469	Msa0670270:intron	15.0%
!!	TAAATATATTGCACAATTTA+TGG	+	chr4_4:12686917-12686936	None:intergenic	15.0%
!!!	TTATGTTTTAAAATGGTCAA+TGG	-	chr4_4:12686141-12686160	Msa0670270:intron	20.0%
!!!	TTCTCATCATAATTTTCTTT+GGG	+	chr4_4:12686250-12686269	None:intergenic	20.0%
!!!	ATTCTCATCATAATTTTCTT+TGG	+	chr4_4:12686251-12686270	None:intergenic	20.0%
!!	ATTATAGTAAATGAGTATCT+GGG	-	chr4_4:12686317-12686336	Msa0670270:intron	20.0%
!!	GAGTATTATAACAATATGAA+TGG	-	chr4_4:12686684-12686703	Msa0670270:intron	20.0%
!!!	GATTTTGAAAGAGAAAAAAA+AGG	+	chr4_4:12686839-12686858	None:intergenic	20.0%
!!	AACTAAAACCAAAAAGATTA+AGG	+	chr4_4:12686892-12686911	None:intergenic	20.0%
!!!	TTATGTTTTAAAATGGTCAA+TGG	-	chr4_4:12686141-12686160	Msa0670270:intron	20.0%
!!!	TTCTCATCATAATTTTCTTT+GGG	+	chr4_4:12686250-12686269	None:intergenic	20.0%
!!!	ATTCTCATCATAATTTTCTT+TGG	+	chr4_4:12686251-12686270	None:intergenic	20.0%
!!	ATTATAGTAAATGAGTATCT+GGG	-	chr4_4:12686317-12686336	Msa0670270:intron	20.0%
!!	GAGTATTATAACAATATGAA+TGG	-	chr4_4:12686684-12686703	Msa0670270:intron	20.0%
!!!	GATTTTGAAAGAGAAAAAAA+AGG	+	chr4_4:12686839-12686858	None:intergenic	20.0%
!!	AACTAAAACCAAAAAGATTA+AGG	+	chr4_4:12686892-12686911	None:intergenic	20.0%
!!	AACATGACAATTAGGTTTTA+GGG	+	chr4_4:12685620-12685639	None:intergenic	25.0%
!!	TAACATGACAATTAGGTTTT+AGG	+	chr4_4:12685621-12685640	None:intergenic	25.0%
!	TAAAACCTAATTGTCATGTT+AGG	-	chr4_4:12685620-12685639	Msa0670270:three_prime_UTR	25.0%
!	AAAACCTAATTGTCATGTTA+GGG	-	chr4_4:12685621-12685640	Msa0670270:three_prime_UTR	25.0%
!	GATTATAGTAAATGAGTATC+TGG	-	chr4_4:12686316-12686335	Msa0670270:intron	25.0%
!!	ATAAATATCATTTTCGGCAA+TGG	-	chr4_4:12686456-12686475	Msa0670270:intron	25.0%
!!	TAAATATCATTTTCGGCAAT+GGG	-	chr4_4:12686457-12686476	Msa0670270:intron	25.0%
!!!	TTTTTGGTTTACATTTCCTA+AGG	-	chr4_4:12686534-12686553	Msa0670270:intron	25.0%
!	TAATACAAAATCCCCTAATT+TGG	+	chr4_4:12686750-12686769	None:intergenic	25.0%
!	TTGAAAGAGAAAAAAAAGGA+AGG	+	chr4_4:12686835-12686854	None:intergenic	25.0%
!	AAAAGATTAAGGATCTGTTT+CGG	+	chr4_4:12686881-12686900	None:intergenic	25.0%
!!	AAACAGATCCTTAATCTTTT+TGG	-	chr4_4:12686881-12686900	Msa0670270:intron	25.0%
!	TCATTTACTTCTTGATCATT+AGG	+	chr4_4:12686998-12687017	None:intergenic	25.0%
!	AATGATCAAGAAGTAAATGA+TGG	-	chr4_4:12686998-12687017	Msa0670270:CDS	25.0%
!	ATGATCAAGAAGTAAATGAT+GGG	-	chr4_4:12686999-12687018	Msa0670270:CDS	25.0%
!	GTGAGATTTATTAGAAATCT+TGG	+	chr4_4:12687131-12687150	None:intergenic	25.0%
!	CATTATGATATTCCTAAAGT+TGG	-	chr4_4:12687199-12687218	Msa0670270:intron	25.0%
!	ACAAACAAATACAAATGACA+GGG	+	chr4_4:12687269-12687288	None:intergenic	25.0%
!	AACAAACAAATACAAATGAC+AGG	+	chr4_4:12687270-12687289	None:intergenic	25.0%
!!	AACATGACAATTAGGTTTTA+GGG	+	chr4_4:12685620-12685639	None:intergenic	25.0%
!!	TAACATGACAATTAGGTTTT+AGG	+	chr4_4:12685621-12685640	None:intergenic	25.0%
!	TAAAACCTAATTGTCATGTT+AGG	-	chr4_4:12685620-12685639	Msa0670270:three_prime_UTR	25.0%
!	AAAACCTAATTGTCATGTTA+GGG	-	chr4_4:12685621-12685640	Msa0670270:three_prime_UTR	25.0%
!	GATTATAGTAAATGAGTATC+TGG	-	chr4_4:12686316-12686335	Msa0670270:intron	25.0%
!!	ATAAATATCATTTTCGGCAA+TGG	-	chr4_4:12686456-12686475	Msa0670270:intron	25.0%
!!	TAAATATCATTTTCGGCAAT+GGG	-	chr4_4:12686457-12686476	Msa0670270:intron	25.0%
!!!	TTTTTGGTTTACATTTCCTA+AGG	-	chr4_4:12686534-12686553	Msa0670270:intron	25.0%
!	TAATACAAAATCCCCTAATT+TGG	+	chr4_4:12686750-12686769	None:intergenic	25.0%
!	TTGAAAGAGAAAAAAAAGGA+AGG	+	chr4_4:12686835-12686854	None:intergenic	25.0%
!	AAAAGATTAAGGATCTGTTT+CGG	+	chr4_4:12686881-12686900	None:intergenic	25.0%
!!	AAACAGATCCTTAATCTTTT+TGG	-	chr4_4:12686881-12686900	Msa0670270:intron	25.0%
!	TCATTTACTTCTTGATCATT+AGG	+	chr4_4:12686998-12687017	None:intergenic	25.0%
!	AATGATCAAGAAGTAAATGA+TGG	-	chr4_4:12686998-12687017	Msa0670270:CDS	25.0%
!	ATGATCAAGAAGTAAATGAT+GGG	-	chr4_4:12686999-12687018	Msa0670270:CDS	25.0%
!	GTGAGATTTATTAGAAATCT+TGG	+	chr4_4:12687131-12687150	None:intergenic	25.0%
!	CATTATGATATTCCTAAAGT+TGG	-	chr4_4:12687199-12687218	Msa0670270:intron	25.0%
!	ACAAACAAATACAAATGACA+GGG	+	chr4_4:12687269-12687288	None:intergenic	25.0%
!	AACAAACAAATACAAATGAC+AGG	+	chr4_4:12687270-12687289	None:intergenic	25.0%
	GTCTTTCATTCAATTCACAA+AGG	-	chr4_4:12685499-12685518	Msa0670270:three_prime_UTR	30.0%
	TAAACCCTAACATGACAATT+AGG	+	chr4_4:12685628-12685647	None:intergenic	30.0%
!	ATAAGATGTTTTACTTGGCT+AGG	+	chr4_4:12686055-12686074	None:intergenic	30.0%
	TAGCCAAGTAAAACATCTTA+TGG	-	chr4_4:12686054-12686073	Msa0670270:intron	30.0%
!	ACACCATAAGATGTTTTACT+TGG	+	chr4_4:12686060-12686079	None:intergenic	30.0%
	AGTAAAACATCTTATGGTGT+TGG	-	chr4_4:12686060-12686079	Msa0670270:intron	30.0%
	GTATGATGTAACAAGAATCA+AGG	+	chr4_4:12686111-12686130	None:intergenic	30.0%
!	ATAATTTTCTTTGGGTCAGA+AGG	+	chr4_4:12686242-12686261	None:intergenic	30.0%
!	TGTATGAATTTTGCAAGAAC+AGG	-	chr4_4:12686272-12686291	Msa0670270:intron	30.0%
!	TTTGTAGTCACTGTTCTTTT+TGG	-	chr4_4:12686518-12686537	Msa0670270:intron	30.0%
	GAAGGACTCAAAAAATGTAT+TGG	+	chr4_4:12686728-12686747	None:intergenic	30.0%
!!!	TTTTTGAGTCCTTCCAAATT+AGG	-	chr4_4:12686734-12686753	Msa0670270:intron	30.0%
!!	TTTTGAGTCCTTCCAAATTA+GGG	-	chr4_4:12686735-12686754	Msa0670270:intron	30.0%
	AAAGAGAAAAAAAAGGAAGG+AGG	+	chr4_4:12686832-12686851	None:intergenic	30.0%
!!	GTGCCATTTGTATTTAATGT+AGG	-	chr4_4:12686947-12686966	Msa0670270:CDS	30.0%
	CCACCTACATTAAATACAAA+TGG	+	chr4_4:12686953-12686972	None:intergenic	30.0%
	CCATTTGTATTTAATGTAGG+TGG	-	chr4_4:12686950-12686969	Msa0670270:CDS	30.0%
	CAAACAAATACAAATGACAG+GGG	+	chr4_4:12687268-12687287	None:intergenic	30.0%
!	TTTGACTTAGATTCTGTTGA+TGG	-	chr4_4:12687379-12687398	Msa0670270:intron	30.0%
	TTGACTTAGATTCTGTTGAT+GGG	-	chr4_4:12687380-12687399	Msa0670270:intron	30.0%
	GTCTTTCATTCAATTCACAA+AGG	-	chr4_4:12685499-12685518	Msa0670270:three_prime_UTR	30.0%
	TAAACCCTAACATGACAATT+AGG	+	chr4_4:12685628-12685647	None:intergenic	30.0%
!	ATAAGATGTTTTACTTGGCT+AGG	+	chr4_4:12686055-12686074	None:intergenic	30.0%
	TAGCCAAGTAAAACATCTTA+TGG	-	chr4_4:12686054-12686073	Msa0670270:intron	30.0%
!	ACACCATAAGATGTTTTACT+TGG	+	chr4_4:12686060-12686079	None:intergenic	30.0%
	AGTAAAACATCTTATGGTGT+TGG	-	chr4_4:12686060-12686079	Msa0670270:intron	30.0%
	GTATGATGTAACAAGAATCA+AGG	+	chr4_4:12686111-12686130	None:intergenic	30.0%
!	ATAATTTTCTTTGGGTCAGA+AGG	+	chr4_4:12686242-12686261	None:intergenic	30.0%
!	TGTATGAATTTTGCAAGAAC+AGG	-	chr4_4:12686272-12686291	Msa0670270:intron	30.0%
!	TTTGTAGTCACTGTTCTTTT+TGG	-	chr4_4:12686518-12686537	Msa0670270:intron	30.0%
	GAAGGACTCAAAAAATGTAT+TGG	+	chr4_4:12686728-12686747	None:intergenic	30.0%
!!!	TTTTTGAGTCCTTCCAAATT+AGG	-	chr4_4:12686734-12686753	Msa0670270:intron	30.0%
!!	TTTTGAGTCCTTCCAAATTA+GGG	-	chr4_4:12686735-12686754	Msa0670270:intron	30.0%
	AAAGAGAAAAAAAAGGAAGG+AGG	+	chr4_4:12686832-12686851	None:intergenic	30.0%
!!	GTGCCATTTGTATTTAATGT+AGG	-	chr4_4:12686947-12686966	Msa0670270:CDS	30.0%
	CCACCTACATTAAATACAAA+TGG	+	chr4_4:12686953-12686972	None:intergenic	30.0%
	CCATTTGTATTTAATGTAGG+TGG	-	chr4_4:12686950-12686969	Msa0670270:CDS	30.0%
	CAAACAAATACAAATGACAG+GGG	+	chr4_4:12687268-12687287	None:intergenic	30.0%
!	TTTGACTTAGATTCTGTTGA+TGG	-	chr4_4:12687379-12687398	Msa0670270:intron	30.0%
	TTGACTTAGATTCTGTTGAT+GGG	-	chr4_4:12687380-12687399	Msa0670270:intron	30.0%
	GAATGAAAGACGAAAAACGA+TGG	+	chr4_4:12685490-12685509	None:intergenic	35.0%
	TAAAGACATGAATGTTTGGG+GGG	+	chr4_4:12685673-12685692	None:intergenic	35.0%
	CTAAAGACATGAATGTTTGG+GGG	+	chr4_4:12685674-12685693	None:intergenic	35.0%
	CCTAAAGACATGAATGTTTG+GGG	+	chr4_4:12685675-12685694	None:intergenic	35.0%
	CCCTAAAGACATGAATGTTT+GGG	+	chr4_4:12685676-12685695	None:intergenic	35.0%
	CCCAAACATTCATGTCTTTA+GGG	-	chr4_4:12685673-12685692	Msa0670270:three_prime_UTR	35.0%
	ACCCTAAAGACATGAATGTT+TGG	+	chr4_4:12685677-12685696	None:intergenic	35.0%
	TCATTGTTGCACAGATATGT+CGG	-	chr4_4:12685873-12685892	Msa0670270:CDS	35.0%
	TCAAATCACCTAGATTGCAA+TGG	+	chr4_4:12686298-12686317	None:intergenic	35.0%
	AATCAACTAGGTTGCATAAC+AGG	+	chr4_4:12686499-12686518	None:intergenic	35.0%
	CAGTGACTACAAAATCAACT+AGG	+	chr4_4:12686511-12686530	None:intergenic	35.0%
	GGACTCAAAAAATGTATTGG+AGG	+	chr4_4:12686725-12686744	None:intergenic	35.0%
	TTTGAGTCCTTCCAAATTAG+GGG	-	chr4_4:12686736-12686755	Msa0670270:intron	35.0%
	ACAAAATCCCCTAATTTGGA+AGG	+	chr4_4:12686746-12686765	None:intergenic	35.0%
	AAAAAAAAGGAAGGAGGAAG+TGG	+	chr4_4:12686826-12686845	None:intergenic	35.0%
	AGATGATCATCATAATGAGC+AGG	+	chr4_4:12687049-12687068	None:intergenic	35.0%
	GCAACTTGATGTTCATAGAT+TGG	-	chr4_4:12687105-12687124	Msa0670270:intron	35.0%
!	ATATTCCTAAAGTTGGTCCT+GGG	-	chr4_4:12687206-12687225	Msa0670270:intron	35.0%
	GAGTTGTTCAAGTATGAAGA+AGG	-	chr4_4:12687238-12687257	Msa0670270:intron	35.0%
	TGACTTAGATTCTGTTGATG+GGG	-	chr4_4:12687381-12687400	Msa0670270:intron	35.0%
	GTATTCGATACTTCCAATTC+AGG	-	chr4_4:12687507-12687526	Msa0670270:five_prime_UTR	35.0%
	GAATGAAAGACGAAAAACGA+TGG	+	chr4_4:12685490-12685509	None:intergenic	35.0%
	TAAAGACATGAATGTTTGGG+GGG	+	chr4_4:12685673-12685692	None:intergenic	35.0%
	CTAAAGACATGAATGTTTGG+GGG	+	chr4_4:12685674-12685693	None:intergenic	35.0%
	CCTAAAGACATGAATGTTTG+GGG	+	chr4_4:12685675-12685694	None:intergenic	35.0%
	CCCTAAAGACATGAATGTTT+GGG	+	chr4_4:12685676-12685695	None:intergenic	35.0%
	CCCAAACATTCATGTCTTTA+GGG	-	chr4_4:12685673-12685692	Msa0670270:three_prime_UTR	35.0%
	ACCCTAAAGACATGAATGTT+TGG	+	chr4_4:12685677-12685696	None:intergenic	35.0%
	TCATTGTTGCACAGATATGT+CGG	-	chr4_4:12685873-12685892	Msa0670270:CDS	35.0%
	TCAAATCACCTAGATTGCAA+TGG	+	chr4_4:12686298-12686317	None:intergenic	35.0%
	AATCAACTAGGTTGCATAAC+AGG	+	chr4_4:12686499-12686518	None:intergenic	35.0%
	CAGTGACTACAAAATCAACT+AGG	+	chr4_4:12686511-12686530	None:intergenic	35.0%
	GGACTCAAAAAATGTATTGG+AGG	+	chr4_4:12686725-12686744	None:intergenic	35.0%
	TTTGAGTCCTTCCAAATTAG+GGG	-	chr4_4:12686736-12686755	Msa0670270:intron	35.0%
	ACAAAATCCCCTAATTTGGA+AGG	+	chr4_4:12686746-12686765	None:intergenic	35.0%
	AAAAAAAAGGAAGGAGGAAG+TGG	+	chr4_4:12686826-12686845	None:intergenic	35.0%
	AGATGATCATCATAATGAGC+AGG	+	chr4_4:12687049-12687068	None:intergenic	35.0%
	GCAACTTGATGTTCATAGAT+TGG	-	chr4_4:12687105-12687124	Msa0670270:intron	35.0%
!	ATATTCCTAAAGTTGGTCCT+GGG	-	chr4_4:12687206-12687225	Msa0670270:intron	35.0%
	GAGTTGTTCAAGTATGAAGA+AGG	-	chr4_4:12687238-12687257	Msa0670270:intron	35.0%
	TGACTTAGATTCTGTTGATG+GGG	-	chr4_4:12687381-12687400	Msa0670270:intron	35.0%
	AAAGACATGAATGTTTGGGG+GGG	+	chr4_4:12685672-12685691	None:intergenic	40.0%
	CCCCAAACATTCATGTCTTT+AGG	-	chr4_4:12685672-12685691	Msa0670270:three_prime_UTR	40.0%
!	AGCTTATCTACTCACCGTTT+TGG	-	chr4_4:12685714-12685733	Msa0670270:three_prime_UTR	40.0%
	TCGGCATATGAGAATGTTGT+TGG	-	chr4_4:12685892-12685911	Msa0670270:CDS	40.0%
	GCATATGAGAATGTTGTTGG+TGG	-	chr4_4:12685895-12685914	Msa0670270:CDS	40.0%
	ACTGAAGATGAAATCTCAGC+AGG	-	chr4_4:12686015-12686034	Msa0670270:intron	40.0%
	TTCTGTTTGATGTGCTGCAA+TGG	-	chr4_4:12686164-12686183	Msa0670270:intron	40.0%
	CTGAAAATCATAAGGGACAG+TGG	-	chr4_4:12686407-12686426	Msa0670270:intron	40.0%
!	GCAATGGGTTTCAGTAAACA+GGG	-	chr4_4:12686472-12686491	Msa0670270:intron	40.0%
	TAAGGATCTGTTTCGGAGTT+TGG	+	chr4_4:12686874-12686893	None:intergenic	40.0%
	TGAAATCCTGGATTCTATCG+CGG	+	chr4_4:12687153-12687172	None:intergenic	40.0%
!	CGAGATATTGGTTGAAATCC+TGG	+	chr4_4:12687165-12687184	None:intergenic	40.0%
!	GATATTCCTAAAGTTGGTCC+TGG	-	chr4_4:12687205-12687224	Msa0670270:intron	40.0%
	AGAGCTATTGTGCAAGCATA+TGG	+	chr4_4:12687304-12687323	None:intergenic	40.0%
	AAAGACATGAATGTTTGGGG+GGG	+	chr4_4:12685672-12685691	None:intergenic	40.0%
	CCCCAAACATTCATGTCTTT+AGG	-	chr4_4:12685672-12685691	Msa0670270:three_prime_UTR	40.0%
!	AGCTTATCTACTCACCGTTT+TGG	-	chr4_4:12685714-12685733	Msa0670270:three_prime_UTR	40.0%
	TCGGCATATGAGAATGTTGT+TGG	-	chr4_4:12685892-12685911	Msa0670270:CDS	40.0%
	GCATATGAGAATGTTGTTGG+TGG	-	chr4_4:12685895-12685914	Msa0670270:CDS	40.0%
	ACTGAAGATGAAATCTCAGC+AGG	-	chr4_4:12686015-12686034	Msa0670270:intron	40.0%
	TTCTGTTTGATGTGCTGCAA+TGG	-	chr4_4:12686164-12686183	Msa0670270:intron	40.0%
	CTGAAAATCATAAGGGACAG+TGG	-	chr4_4:12686407-12686426	Msa0670270:intron	40.0%
!	GCAATGGGTTTCAGTAAACA+GGG	-	chr4_4:12686472-12686491	Msa0670270:intron	40.0%
	TAAGGATCTGTTTCGGAGTT+TGG	+	chr4_4:12686874-12686893	None:intergenic	40.0%
	TGAAATCCTGGATTCTATCG+CGG	+	chr4_4:12687153-12687172	None:intergenic	40.0%
!	CGAGATATTGGTTGAAATCC+TGG	+	chr4_4:12687165-12687184	None:intergenic	40.0%
!	GATATTCCTAAAGTTGGTCC+TGG	-	chr4_4:12687205-12687224	Msa0670270:intron	40.0%
	AGAGCTATTGTGCAAGCATA+TGG	+	chr4_4:12687304-12687323	None:intergenic	40.0%
	AAGACATGAATGTTTGGGGG+GGG	+	chr4_4:12685671-12685690	None:intergenic	45.0%
	TGGTGGTAAACTGAAGCTGA+AGG	-	chr4_4:12685912-12685931	Msa0670270:CDS	45.0%
	GGTGGTAAACTGAAGCTGAA+GGG	-	chr4_4:12685913-12685932	Msa0670270:CDS	45.0%
!	GAAGCTGAAGGGAAAAGCAT+TGG	-	chr4_4:12685924-12685943	Msa0670270:CDS	45.0%
!!	GGAAAAGCATTGGATGTTGC+TGG	-	chr4_4:12685934-12685953	Msa0670270:CDS	45.0%
!!	AAAGCATTGGATGTTGCTGG+CGG	-	chr4_4:12685937-12685956	Msa0670270:CDS	45.0%
	AGAACAGGCCATTGCAATCT+AGG	-	chr4_4:12686287-12686306	Msa0670270:intron	45.0%
!	GGCAATGGGTTTCAGTAAAC+AGG	-	chr4_4:12686471-12686490	Msa0670270:intron	45.0%
	ACATTTCCTAAGGCTCCGTT+CGG	-	chr4_4:12686544-12686563	Msa0670270:intron	45.0%
	AAAAGGAAGGAGGAAGTGGA+GGG	+	chr4_4:12686822-12686841	None:intergenic	45.0%
	AAAAAGGAAGGAGGAAGTGG+AGG	+	chr4_4:12686823-12686842	None:intergenic	45.0%
	ATCTGTTTCGGAGTTTGGAG+GGG	+	chr4_4:12686869-12686888	None:intergenic	45.0%
	GATCTGTTTCGGAGTTTGGA+GGG	+	chr4_4:12686870-12686889	None:intergenic	45.0%
!	ATGATGGGAGTGAATTGAGC+AGG	-	chr4_4:12687014-12687033	Msa0670270:CDS	45.0%
	TGATGGGAGTGAATTGAGCA+GGG	-	chr4_4:12687015-12687034	Msa0670270:CDS	45.0%
	ATCATCTTACACCAGCAGAG+AGG	-	chr4_4:12687062-12687081	Msa0670270:CDS	45.0%
	CGCTCATGTTTGCGAGATAT+TGG	+	chr4_4:12687177-12687196	None:intergenic	45.0%
	AATCACCCAGGACCAACTTT+AGG	+	chr4_4:12687214-12687233	None:intergenic	45.0%
	AACAACTCCTTGAATCACCC+AGG	+	chr4_4:12687226-12687245	None:intergenic	45.0%
	AAGACATGAATGTTTGGGGG+GGG	+	chr4_4:12685671-12685690	None:intergenic	45.0%
	TGGTGGTAAACTGAAGCTGA+AGG	-	chr4_4:12685912-12685931	Msa0670270:CDS	45.0%
	GGTGGTAAACTGAAGCTGAA+GGG	-	chr4_4:12685913-12685932	Msa0670270:CDS	45.0%
!	GAAGCTGAAGGGAAAAGCAT+TGG	-	chr4_4:12685924-12685943	Msa0670270:CDS	45.0%
!!	GGAAAAGCATTGGATGTTGC+TGG	-	chr4_4:12685934-12685953	Msa0670270:CDS	45.0%
!!	AAAGCATTGGATGTTGCTGG+CGG	-	chr4_4:12685937-12685956	Msa0670270:CDS	45.0%
	AGAACAGGCCATTGCAATCT+AGG	-	chr4_4:12686287-12686306	Msa0670270:intron	45.0%
!	GGCAATGGGTTTCAGTAAAC+AGG	-	chr4_4:12686471-12686490	Msa0670270:intron	45.0%
	ACATTTCCTAAGGCTCCGTT+CGG	-	chr4_4:12686544-12686563	Msa0670270:intron	45.0%
	AAAAGGAAGGAGGAAGTGGA+GGG	+	chr4_4:12686822-12686841	None:intergenic	45.0%
	AAAAAGGAAGGAGGAAGTGG+AGG	+	chr4_4:12686823-12686842	None:intergenic	45.0%
	ATCTGTTTCGGAGTTTGGAG+GGG	+	chr4_4:12686869-12686888	None:intergenic	45.0%
	GATCTGTTTCGGAGTTTGGA+GGG	+	chr4_4:12686870-12686889	None:intergenic	45.0%
!	ATGATGGGAGTGAATTGAGC+AGG	-	chr4_4:12687014-12687033	Msa0670270:CDS	45.0%
	TGATGGGAGTGAATTGAGCA+GGG	-	chr4_4:12687015-12687034	Msa0670270:CDS	45.0%
	ATCATCTTACACCAGCAGAG+AGG	-	chr4_4:12687062-12687081	Msa0670270:CDS	45.0%
	CGCTCATGTTTGCGAGATAT+TGG	+	chr4_4:12687177-12687196	None:intergenic	45.0%
	AATCACCCAGGACCAACTTT+AGG	+	chr4_4:12687214-12687233	None:intergenic	45.0%
	AACAACTCCTTGAATCACCC+AGG	+	chr4_4:12687226-12687245	None:intergenic	45.0%
	AGACATGAATGTTTGGGGGG+GGG	+	chr4_4:12685670-12685689	None:intergenic	50.0%
	CATTTCCTAAGGCTCCGTTC+GGG	-	chr4_4:12686545-12686564	Msa0670270:intron	50.0%
!!	GAGGGAATGGATGGCTTTGT+GGG	-	chr4_4:12686579-12686598	Msa0670270:intron	50.0%
!!	AGGGAATGGATGGCTTTGTG+GGG	-	chr4_4:12686580-12686599	Msa0670270:intron	50.0%
	TGGAGGGAATAGAGGACTTC+GGG	+	chr4_4:12686806-12686825	None:intergenic	50.0%
	GTGGAGGGAATAGAGGACTT+CGG	+	chr4_4:12686807-12686826	None:intergenic	50.0%
	TTTCGGAGTTTGGAGGGGAA+GGG	+	chr4_4:12686864-12686883	None:intergenic	50.0%
	GGATCTGTTTCGGAGTTTGG+AGG	+	chr4_4:12686871-12686890	None:intergenic	50.0%
	ATCTTACACCAGCAGAGAGG+CGG	-	chr4_4:12687065-12687084	Msa0670270:CDS	50.0%
	ATCTCACCGCGATAGAATCC+AGG	-	chr4_4:12687144-12687163	Msa0670270:intron	50.0%
	AGTTGGTCCTGGGTGATTCA+AGG	-	chr4_4:12687216-12687235	Msa0670270:intron	50.0%
	AGACATGAATGTTTGGGGGG+GGG	+	chr4_4:12685670-12685689	None:intergenic	50.0%
	CATTTCCTAAGGCTCCGTTC+GGG	-	chr4_4:12686545-12686564	Msa0670270:intron	50.0%
!!	GAGGGAATGGATGGCTTTGT+GGG	-	chr4_4:12686579-12686598	Msa0670270:intron	50.0%
!!	AGGGAATGGATGGCTTTGTG+GGG	-	chr4_4:12686580-12686599	Msa0670270:intron	50.0%
	TGGAGGGAATAGAGGACTTC+GGG	+	chr4_4:12686806-12686825	None:intergenic	50.0%
	GTGGAGGGAATAGAGGACTT+CGG	+	chr4_4:12686807-12686826	None:intergenic	50.0%
	TTTCGGAGTTTGGAGGGGAA+GGG	+	chr4_4:12686864-12686883	None:intergenic	50.0%
	GGATCTGTTTCGGAGTTTGG+AGG	+	chr4_4:12686871-12686890	None:intergenic	50.0%
	ATCTTACACCAGCAGAGAGG+CGG	-	chr4_4:12687065-12687084	Msa0670270:CDS	50.0%
	ATCTCACCGCGATAGAATCC+AGG	-	chr4_4:12687144-12687163	Msa0670270:intron	50.0%
	AGTTGGTCCTGGGTGATTCA+AGG	-	chr4_4:12687216-12687235	Msa0670270:intron	50.0%
	ACATGAATGTTTGGGGGGGG+GGG	+	chr4_4:12685668-12685687	None:intergenic	55.0%
	GACATGAATGTTTGGGGGGG+GGG	+	chr4_4:12685669-12685688	None:intergenic	55.0%
	AAACTCCCGAACGGAGCCTT+AGG	+	chr4_4:12686553-12686572	None:intergenic	55.0%
	TAAGGCTCCGTTCGGGAGTT+TGG	-	chr4_4:12686552-12686571	Msa0670270:intron	55.0%
	TTTGGAGGGGAGGGAATGGA+TGG	-	chr4_4:12686570-12686589	Msa0670270:intron	55.0%
!	GGAGGGAATGGATGGCTTTG+TGG	-	chr4_4:12686578-12686597	Msa0670270:intron	55.0%
!!	GGGAATGGATGGCTTTGTGG+GGG	-	chr4_4:12686581-12686600	Msa0670270:intron	55.0%
!!	AATGGATGGCTTTGTGGGGG+AGG	-	chr4_4:12686584-12686603	Msa0670270:intron	55.0%
!!	ATGGATGGCTTTGTGGGGGA+GGG	-	chr4_4:12686585-12686604	Msa0670270:intron	55.0%
	GGAATAGAGGACTTCGGGAG+GGG	+	chr4_4:12686801-12686820	None:intergenic	55.0%
	GGGAATAGAGGACTTCGGGA+GGG	+	chr4_4:12686802-12686821	None:intergenic	55.0%
	AGGGAATAGAGGACTTCGGG+AGG	+	chr4_4:12686803-12686822	None:intergenic	55.0%
	GGAGGAAGTGGAGGGAATAG+AGG	+	chr4_4:12686814-12686833	None:intergenic	55.0%
	GTTTCGGAGTTTGGAGGGGA+AGG	+	chr4_4:12686865-12686884	None:intergenic	55.0%
	TCTATGTACCGCCTCTCTGC+TGG	+	chr4_4:12687076-12687095	None:intergenic	55.0%
	ACATGAATGTTTGGGGGGGG+GGG	+	chr4_4:12685668-12685687	None:intergenic	55.0%
	GACATGAATGTTTGGGGGGG+GGG	+	chr4_4:12685669-12685688	None:intergenic	55.0%
	AAACTCCCGAACGGAGCCTT+AGG	+	chr4_4:12686553-12686572	None:intergenic	55.0%
	TAAGGCTCCGTTCGGGAGTT+TGG	-	chr4_4:12686552-12686571	Msa0670270:intron	55.0%
	TTTGGAGGGGAGGGAATGGA+TGG	-	chr4_4:12686570-12686589	Msa0670270:intron	55.0%
!	GGAGGGAATGGATGGCTTTG+TGG	-	chr4_4:12686578-12686597	Msa0670270:intron	55.0%
!!	GGGAATGGATGGCTTTGTGG+GGG	-	chr4_4:12686581-12686600	Msa0670270:intron	55.0%
!!	AATGGATGGCTTTGTGGGGG+AGG	-	chr4_4:12686584-12686603	Msa0670270:intron	55.0%
!!	ATGGATGGCTTTGTGGGGGA+GGG	-	chr4_4:12686585-12686604	Msa0670270:intron	55.0%
	GGAATAGAGGACTTCGGGAG+GGG	+	chr4_4:12686801-12686820	None:intergenic	55.0%
	GGGAATAGAGGACTTCGGGA+GGG	+	chr4_4:12686802-12686821	None:intergenic	55.0%
	AGGGAATAGAGGACTTCGGG+AGG	+	chr4_4:12686803-12686822	None:intergenic	55.0%
	GGAGGAAGTGGAGGGAATAG+AGG	+	chr4_4:12686814-12686833	None:intergenic	55.0%
	GTTTCGGAGTTTGGAGGGGA+AGG	+	chr4_4:12686865-12686884	None:intergenic	55.0%
	TCTATGTACCGCCTCTCTGC+TGG	+	chr4_4:12687076-12687095	None:intergenic	55.0%
	ATGAATGTTTGGGGGGGGGG+GGG	+	chr4_4:12685666-12685685	None:intergenic	60.0%
	CATGAATGTTTGGGGGGGGG+GGG	+	chr4_4:12685667-12685686	None:intergenic	60.0%
	GCTCCGTTCGGGAGTTTGGA+GGG	-	chr4_4:12686556-12686575	Msa0670270:intron	60.0%
	CTCCGTTCGGGAGTTTGGAG+GGG	-	chr4_4:12686557-12686576	Msa0670270:intron	60.0%
	CTCCCCTCCAAACTCCCGAA+CGG	+	chr4_4:12686562-12686581	None:intergenic	60.0%
	GTTCGGGAGTTTGGAGGGGA+GGG	-	chr4_4:12686561-12686580	Msa0670270:intron	60.0%
	GGAGTTTGGAGGGGAGGGAA+TGG	-	chr4_4:12686566-12686585	Msa0670270:intron	60.0%
!	GGCTTTGTGGGGGAGGGAAA+TGG	-	chr4_4:12686591-12686610	Msa0670270:intron	60.0%
	TAGAGGACTTCGGGAGGGGA+GGG	+	chr4_4:12686797-12686816	None:intergenic	60.0%
	ATAGAGGACTTCGGGAGGGG+AGG	+	chr4_4:12686798-12686817	None:intergenic	60.0%
	ATGAATGTTTGGGGGGGGGG+GGG	+	chr4_4:12685666-12685685	None:intergenic	60.0%
	CATGAATGTTTGGGGGGGGG+GGG	+	chr4_4:12685667-12685686	None:intergenic	60.0%
	GCTCCGTTCGGGAGTTTGGA+GGG	-	chr4_4:12686556-12686575	Msa0670270:intron	60.0%
	CTCCGTTCGGGAGTTTGGAG+GGG	-	chr4_4:12686557-12686576	Msa0670270:intron	60.0%
	CTCCCCTCCAAACTCCCGAA+CGG	+	chr4_4:12686562-12686581	None:intergenic	60.0%
	GTTCGGGAGTTTGGAGGGGA+GGG	-	chr4_4:12686561-12686580	Msa0670270:intron	60.0%
	GGAGTTTGGAGGGGAGGGAA+TGG	-	chr4_4:12686566-12686585	Msa0670270:intron	60.0%
!	GGCTTTGTGGGGGAGGGAAA+TGG	-	chr4_4:12686591-12686610	Msa0670270:intron	60.0%
	TAGAGGACTTCGGGAGGGGA+GGG	+	chr4_4:12686797-12686816	None:intergenic	60.0%
	ATAGAGGACTTCGGGAGGGG+AGG	+	chr4_4:12686798-12686817	None:intergenic	60.0%
	GGCTCCGTTCGGGAGTTTGG+AGG	-	chr4_4:12686555-12686574	Msa0670270:intron	65.0%
	CGTTCGGGAGTTTGGAGGGG+AGG	-	chr4_4:12686560-12686579	Msa0670270:intron	65.0%
	TTCGGGAGGGGAGGGCTTTG+GGG	+	chr4_4:12686789-12686808	None:intergenic	65.0%
	CTTCGGGAGGGGAGGGCTTT+GGG	+	chr4_4:12686790-12686809	None:intergenic	65.0%
	ACTTCGGGAGGGGAGGGCTT+TGG	+	chr4_4:12686791-12686810	None:intergenic	65.0%
	CGGAGTTTGGAGGGGAAGGG+AGG	+	chr4_4:12686861-12686880	None:intergenic	65.0%
	GGCTCCGTTCGGGAGTTTGG+AGG	-	chr4_4:12686555-12686574	Msa0670270:intron	65.0%
	CGTTCGGGAGTTTGGAGGGG+AGG	-	chr4_4:12686560-12686579	Msa0670270:intron	65.0%
	TTCGGGAGGGGAGGGCTTTG+GGG	+	chr4_4:12686789-12686808	None:intergenic	65.0%
	CTTCGGGAGGGGAGGGCTTT+GGG	+	chr4_4:12686790-12686809	None:intergenic	65.0%
	ACTTCGGGAGGGGAGGGCTT+TGG	+	chr4_4:12686791-12686810	None:intergenic	65.0%
	CGGAGTTTGGAGGGGAAGGG+AGG	+	chr4_4:12686861-12686880	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_4	gene	12685448	12687527	12685448	ID=Msa0670270;Name=Msa0670270
chr4_4	mRNA	12685448	12687527	12685448	ID=Msa0670270-mRNA-1;Parent=Msa0670270;Name=Msa0670270-mRNA-1;_AED=0.01;_eAED=0.01;_QI=75\|1\|1\|1\|0.5\|0.33\|3\|296\|136
chr4_4	exon	12685448	12686006	12685448	ID=Msa0670270-mRNA-1:exon:3841;Parent=Msa0670270-mRNA-1
chr4_4	exon	12686939	12687088	12686939	ID=Msa0670270-mRNA-1:exon:3840;Parent=Msa0670270-mRNA-1
chr4_4	exon	12687455	12687527	12687455	ID=Msa0670270-mRNA-1:exon:3839;Parent=Msa0670270-mRNA-1
chr4_4	five_prime_UTR	12687455	12687527	12687455	ID=Msa0670270-mRNA-1:five_prime_utr;Parent=Msa0670270-mRNA-1
chr4_4	five_prime_UTR	12687087	12687088	12687087	ID=Msa0670270-mRNA-1:five_prime_utr;Parent=Msa0670270-mRNA-1
chr4_4	CDS	12686939	12687086	12686939	ID=Msa0670270-mRNA-1:cds;Parent=Msa0670270-mRNA-1
chr4_4	CDS	12685744	12686006	12685744	ID=Msa0670270-mRNA-1:cds;Parent=Msa0670270-mRNA-1
chr4_4	three_prime_UTR	12685448	12685743	12685448	ID=Msa0670270-mRNA-1:three_prime_utr;Parent=Msa0670270-mRNA-1

Gene Sequence

>Msa0670270

ATGTCGGCATATGAGAATGTTGTTGGTGGTAAACTGAAGCTGAAGGGAAAAGCATTGGATGTTGCTGGCGGAATCAAGAAGAAGAAAAAGAAGAACAAAAGAAATCAACAACAGTTTTTGCAAGCAACTGAAGATGAAATCTCAGCAGGTGGAAGTACAGAACAAGCTAAAGATCCTAATGATCAAGAAGTAAATGATGGGAGTGAATTGAGCAGGGAAGAGAAGCCTGCTCATTATGATGATCATCTTACACCAGCAGAGAGGCGGTACATAGAACAGAGAGAGCAACTTGATGTTCATAGATTGGCCAAGATTTCTAATAAATCTCACCGCGATAGAATCCAGGATTTCAACCAATATCTCGCAAACATGAGCGAGCATTATGATATTCCTAAAGTTGGTCCTGGGTGA

Protein sequence

>Msa0670270

MSAYENVVGGKLKLKGKALDVAGGIKKKKKKNKRNQQQFLQATEDEISAGGSTEQAKDPNDQEVNDGSELSREEKPAHYDDHLTPAERRYIEQREQLDVHRLAKISNKSHRDRIQDFNQYLANMSEHYDIPKVGPG*