AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1204250


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1204250 MtrunA17_Chr4g0068941 96.109 257 6 1 1 257 1 253 4.32e-179 492
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1204250 AT5G30490.1 57.269 227 81 4 33 251 16 234 1.42e-65 204
Msa1204250 AT5G30490.2 57.269 227 81 4 33 251 16 234 1.42e-65 204
Msa1204250 AT5G30490.3 57.269 227 81 4 33 251 16 234 1.42e-65 204

Find 80 sgRNAs with CRISPR-Local

Find 324 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAACTGCTAATAACTTTAT+TGG 0.127150 8_1:-59773533 None:intergenic
GTAGAACTGGATGTCTTATT+TGG 0.132758 8_1:+59773707 Msa1204250:intron
ATACCTTGGCGAATTATTTA+TGG 0.175905 8_1:+59774936 Msa1204250:three_prime_UTR
GAAGAGTTCAAACCAGTATT+TGG 0.182757 8_1:+59774774 Msa1204250:CDS
AAATGACATGGTACTTAATA+TGG 0.196878 8_1:+59775083 Msa1204250:three_prime_UTR
AAAGGACTGGGGAGAATTTA+AGG 0.207621 8_1:+59774711 Msa1204250:CDS
TAAAATATACAGATGTATTT+TGG 0.214657 8_1:+59775124 Msa1204250:three_prime_UTR
TTGCATATCTGGTCGCTTCC+TGG 0.258995 8_1:-59774872 None:intergenic
GTTTATTATCTTGGTGTTCC+TGG 0.283769 8_1:+59774970 Msa1204250:three_prime_UTR
GTATATTCATCGATCTCTTC+TGG 0.294235 8_1:-59775335 None:intergenic
TTGTCATGAGTTTATTATCT+TGG 0.301389 8_1:+59774961 Msa1204250:three_prime_UTR
TGGTGTTCCTGGAAATGTTT+TGG 0.311183 8_1:+59774981 Msa1204250:three_prime_UTR
TCAGAAGCCAAAACATTTCC+AGG 0.336395 8_1:-59774988 None:intergenic
ACAGCGTCGTCTTGCATATC+TGG 0.348328 8_1:-59774883 None:intergenic
TCCAGGCTTTCCCCTGGAAC+AGG 0.356037 8_1:-59773346 None:intergenic
TTTATTCATTTGTTCCCATA+TGG 0.359963 8_1:-59773503 None:intergenic
CCCAGGAGATTCAGTTGTCT+TGG 0.360854 8_1:-59773739 None:intergenic
TCTGTCAAAGAACCTGTTCC+AGG 0.362610 8_1:+59773334 Msa1204250:CDS
AGGAAACCTTATCCAAATAC+TGG 0.366492 8_1:-59774786 None:intergenic
GTTCTCTGAGGCTCACTTCA+TGG 0.369524 8_1:-59775169 None:intergenic
GTAATCTGTTCGCTGCAAAA+AGG 0.374277 8_1:-59774806 None:intergenic
TAGAACTGGATGTCTTATTT+GGG 0.385492 8_1:+59773708 Msa1204250:intron
CTTTCGTTTCTGCCTCAAGC+AGG 0.388900 8_1:+59773862 Msa1204250:CDS
TGTACTTGATAAGACCAAAA+AGG 0.392164 8_1:+59774693 Msa1204250:CDS
AGCAGAAGGTGCAGGAGCTT+TGG 0.392692 8_1:-59774626 None:intergenic
TTCAAACCAGTATTTGGATA+AGG 0.393487 8_1:+59774780 Msa1204250:CDS
GGAAAGCCTGGAACCAAAAC+AGG 0.393883 8_1:+59773357 Msa1204250:CDS
ACTGAGGTTCGAGACTTTGC+TGG 0.395239 8_1:+59774544 Msa1204250:CDS
CACGATTGGCATTGCAATCC+AGG 0.397589 8_1:+59774854 Msa1204250:CDS
AAGCTCAAGTTGATGCCATA+TGG 0.405389 8_1:+59773488 Msa1204250:CDS
AAATGAAGGCAGTTGAAGTA+TGG 0.405927 8_1:+59774908 Msa1204250:exon
ACCTGTTCCAGGGGAAAGCC+TGG 0.406254 8_1:+59773345 Msa1204250:CDS
CCCTCTCTCGCTCAAATTCA+CGG 0.409298 8_1:-59774828 None:intergenic
GAACCAAAACAGGATGTTAC+TGG 0.415009 8_1:+59773367 Msa1204250:CDS
TTTGGTTCCAGGCTTTCCCC+TGG 0.416515 8_1:-59773352 None:intergenic
TCACCAGTAACATCCTGTTT+TGG 0.423793 8_1:-59773370 None:intergenic
CTGGATGTCTTATTTGGGAT+TGG 0.424113 8_1:+59773713 Msa1204250:CDS
TTAATATGGATGAGGAAAAC+AGG 0.433111 8_1:+59775097 Msa1204250:three_prime_UTR
CCCAAGACAACTGAATCTCC+TGG 0.433746 8_1:+59773738 Msa1204250:CDS
ATTGTTTCAGATACAATCAA+TGG 0.433797 8_1:+59773298 Msa1204250:intron
TGCTGCTGCTGCTCTTGCAG+CGG 0.435556 8_1:+59773827 Msa1204250:CDS
ATATGGGAACAAATGAATAA+AGG 0.438066 8_1:+59773505 Msa1204250:CDS
CCAGGAGATTCAGTTGTCTT+GGG 0.439891 8_1:-59773738 None:intergenic
CAAAATGATTCTTGTAAGCT+AGG 0.446612 8_1:-59775217 None:intergenic
CTAAAATTGATATTGATCAA+TGG 0.459264 8_1:-59775267 None:intergenic
AGCTCAAGTTGATGCCATAT+GGG 0.464195 8_1:+59773489 Msa1204250:CDS
GAATTTAAGGAAGAAAATAA+AGG 0.476093 8_1:+59774724 Msa1204250:CDS
CGAAGATCTCTTCTTTGATG+TGG 0.495435 8_1:-59773584 None:intergenic
GCTTGTGGATTCTGATTCAA+AGG 0.498471 8_1:+59774588 Msa1204250:CDS
TTCGTTTCTGCCTCAAGCAG+GGG 0.501811 8_1:+59773864 Msa1204250:CDS
TCAAAGTGTACCTGGTGTGC+TGG 0.507207 8_1:+59773773 Msa1204250:CDS
GCATCCACAGCAGAAGGTGC+AGG 0.508516 8_1:-59774634 None:intergenic
TTTCGTTTCTGCCTCAAGCA+GGG 0.511551 8_1:+59773863 Msa1204250:CDS
GCGAGAGAGGGATGCACGAT+TGG 0.512295 8_1:+59774840 Msa1204250:CDS
AGCTCCTGCACCTTCTGCTG+TGG 0.517744 8_1:+59774630 Msa1204250:CDS
CACATCAAAGAAGAGATCTT+CGG 0.526656 8_1:+59773585 Msa1204250:CDS
AGCACACCAGGTACACTTTG+AGG 0.529967 8_1:-59773771 None:intergenic
TGTGCTCCTCAAAGTGTACC+TGG 0.545125 8_1:+59773765 Msa1204250:CDS
TAAGGAAGAAAATAAAGGAC+TGG 0.554675 8_1:+59774729 Msa1204250:CDS
CTGTCAAAGAACCTGTTCCA+GGG 0.556764 8_1:+59773335 Msa1204250:CDS
GTACTGCCTTCCAGCACACC+AGG 0.559479 8_1:-59773783 None:intergenic
ACCGTGAATTTGAGCGAGAG+AGG 0.565595 8_1:+59774827 Msa1204250:CDS
CATGGTACTTAATATGGATG+AGG 0.570166 8_1:+59775089 Msa1204250:three_prime_UTR
TGGAATGCTTTCAAATGACA+TGG 0.576365 8_1:+59775071 Msa1204250:three_prime_UTR
AGACGACGCTGTATAAATGA+AGG 0.577491 8_1:+59774894 Msa1204250:exon
CCGTGAATTTGAGCGAGAGA+GGG 0.577774 8_1:+59774828 Msa1204250:CDS
CTTTGAGGAGCACACTGCCC+AGG 0.584341 8_1:-59773756 None:intergenic
CCAAGACAACTGAATCTCCT+GGG 0.592003 8_1:+59773739 Msa1204250:CDS
TCGTTTCTGCCTCAAGCAGG+GGG 0.596370 8_1:+59773865 Msa1204250:CDS
AGGACAGCATCCACAGCAGA+AGG 0.596814 8_1:-59774640 None:intergenic
AAACCATAAATAATTCGCCA+AGG 0.622206 8_1:-59774939 None:intergenic
GAAGTATGGAGTTGATACCT+TGG 0.624618 8_1:+59774922 Msa1204250:three_prime_UTR
AGTGTACCTGGTGTGCTGGA+AGG 0.640031 8_1:+59773777 Msa1204250:CDS
GAAGGCAGTACAAGTGACGA+AGG 0.646723 8_1:+59773795 Msa1204250:CDS
TGCAGAATATGGGATAGCAA+AGG 0.647146 8_1:-59775368 None:intergenic
TGTGGATTCTGATTCAAAGG+AGG 0.652024 8_1:+59774591 Msa1204250:CDS
TTTCCATTATCAGATTACTG+AGG 0.657648 8_1:+59774528 Msa1204250:intron
TGTCAAAGAACCTGTTCCAG+GGG 0.662815 8_1:+59773336 Msa1204250:CDS
TGTGAATGACATGTTCTCTG+AGG 0.694386 8_1:-59775181 None:intergenic
AAGGCAGTACAAGTGACGAA+GGG 0.707515 8_1:+59773796 Msa1204250:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAAAAACAAAACAA+CGG - chr8_1:59773621-59773640 None:intergenic 10.0%
!! AAAAATAAAAAACAAAACAA+CGG - chr8_1:59773621-59773640 None:intergenic 10.0%
!!! TAAAATATACAGATGTATTT+TGG + chr8_1:59775124-59775143 Msa1204250:three_prime_UTR 15.0%
!!! TAAAATATACAGATGTATTT+TGG + chr8_1:59775124-59775143 Msa1204250:three_prime_UTR 15.0%
!!! ATGTTTATTTTCGAGATTTA+TGG + chr8_1:59773414-59773433 Msa1204250:intron 20.0%
!! AAAACTGCTAATAACTTTAT+TGG - chr8_1:59773536-59773555 None:intergenic 20.0%
!!! TGTTTTATTTTTACGGTTAT+TGG - chr8_1:59774326-59774345 None:intergenic 20.0%
!! TAACCGTAAAAATAAAACAT+TGG + chr8_1:59774327-59774346 Msa1204250:intron 20.0%
!!! GAACCAATGTTTTATTTTTA+CGG - chr8_1:59774333-59774352 None:intergenic 20.0%
!! TTCCAATATTTGATATAGTA+GGG + chr8_1:59774350-59774369 Msa1204250:intron 20.0%
!! GTTCTATGAATAATGAATAA+TGG - chr8_1:59774470-59774489 None:intergenic 20.0%
!! AATTGAATATAAAAAGCTTG+TGG + chr8_1:59774573-59774592 Msa1204250:CDS 20.0%
!! GAATTTAAGGAAGAAAATAA+AGG + chr8_1:59774724-59774743 Msa1204250:CDS 20.0%
!! CTAAAATTGATATTGATCAA+TGG - chr8_1:59775270-59775289 None:intergenic 20.0%
!!! AGTTTTAAATGAACTAATGT+CGG - chr8_1:59775294-59775313 None:intergenic 20.0%
!!! ATGTTTATTTTCGAGATTTA+TGG + chr8_1:59773414-59773433 Msa1204250:intron 20.0%
!! AAAACTGCTAATAACTTTAT+TGG - chr8_1:59773536-59773555 None:intergenic 20.0%
!!! TGTTTTATTTTTACGGTTAT+TGG - chr8_1:59774326-59774345 None:intergenic 20.0%
!! TAACCGTAAAAATAAAACAT+TGG + chr8_1:59774327-59774346 Msa1204250:intron 20.0%
!!! GAACCAATGTTTTATTTTTA+CGG - chr8_1:59774333-59774352 None:intergenic 20.0%
!! TTCCAATATTTGATATAGTA+GGG + chr8_1:59774350-59774369 Msa1204250:intron 20.0%
!! GTTCTATGAATAATGAATAA+TGG - chr8_1:59774470-59774489 None:intergenic 20.0%
!! AATTGAATATAAAAAGCTTG+TGG + chr8_1:59774573-59774592 Msa1204250:CDS 20.0%
!! GAATTTAAGGAAGAAAATAA+AGG + chr8_1:59774724-59774743 Msa1204250:CDS 20.0%
!! CTAAAATTGATATTGATCAA+TGG - chr8_1:59775270-59775289 None:intergenic 20.0%
!!! AGTTTTAAATGAACTAATGT+CGG - chr8_1:59775294-59775313 None:intergenic 20.0%
! AAAAACAAATCTAGATGGAT+CGG - chr8_1:59773100-59773119 None:intergenic 25.0%
! CTATGAAAAACAAATCTAGA+TGG - chr8_1:59773105-59773124 None:intergenic 25.0%
!!! GATTTGTTTTTCATAGTGAT+TGG + chr8_1:59773109-59773128 Msa1204250:intron 25.0%
! TGGAAAATTGTAGTGAATTA+GGG - chr8_1:59773168-59773187 None:intergenic 25.0%
! ATATGAAAAAGGAGTAAAAG+AGG - chr8_1:59773191-59773210 None:intergenic 25.0%
! ATTGTTTCAGATACAATCAA+TGG + chr8_1:59773298-59773317 Msa1204250:intron 25.0%
! TTTATTCATTTGTTCCCATA+TGG - chr8_1:59773506-59773525 None:intergenic 25.0%
! ATATGGGAACAAATGAATAA+AGG + chr8_1:59773505-59773524 Msa1204250:CDS 25.0%
! CAATTAGTATTGTCAAATAG+CGG + chr8_1:59774136-59774155 Msa1204250:intron 25.0%
! AATTCCACTATGTTATAACA+GGG - chr8_1:59774171-59774190 None:intergenic 25.0%
! AAATTCCACTATGTTATAAC+AGG - chr8_1:59774172-59774191 None:intergenic 25.0%
! GTTCCAATATTTGATATAGT+AGG + chr8_1:59774349-59774368 Msa1204250:intron 25.0%
! GAAACTCAAATGTAATATGT+AGG - chr8_1:59774492-59774511 None:intergenic 25.0%
!!! TTTTCTTCTTGATTTGTTCA+AGG - chr8_1:59774663-59774682 None:intergenic 25.0%
! TTGTCATGAGTTTATTATCT+TGG + chr8_1:59774961-59774980 Msa1204250:three_prime_UTR 25.0%
! AAATGACATGGTACTTAATA+TGG + chr8_1:59775083-59775102 Msa1204250:three_prime_UTR 25.0%
! TGATCAATGGCTTAAAAAAA+TGG - chr8_1:59775257-59775276 None:intergenic 25.0%
!!! TTTAAAACTCATTTTACGTC+TGG + chr8_1:59775305-59775324 Msa1204250:three_prime_UTR 25.0%
! AAAAACAAATCTAGATGGAT+CGG - chr8_1:59773100-59773119 None:intergenic 25.0%
! CTATGAAAAACAAATCTAGA+TGG - chr8_1:59773105-59773124 None:intergenic 25.0%
!!! GATTTGTTTTTCATAGTGAT+TGG + chr8_1:59773109-59773128 Msa1204250:intron 25.0%
! TGGAAAATTGTAGTGAATTA+GGG - chr8_1:59773168-59773187 None:intergenic 25.0%
! ATATGAAAAAGGAGTAAAAG+AGG - chr8_1:59773191-59773210 None:intergenic 25.0%
! ATTGTTTCAGATACAATCAA+TGG + chr8_1:59773298-59773317 Msa1204250:intron 25.0%
! TTTATTCATTTGTTCCCATA+TGG - chr8_1:59773506-59773525 None:intergenic 25.0%
! ATATGGGAACAAATGAATAA+AGG + chr8_1:59773505-59773524 Msa1204250:CDS 25.0%
! CAATTAGTATTGTCAAATAG+CGG + chr8_1:59774136-59774155 Msa1204250:intron 25.0%
! AATTCCACTATGTTATAACA+GGG - chr8_1:59774171-59774190 None:intergenic 25.0%
! AAATTCCACTATGTTATAAC+AGG - chr8_1:59774172-59774191 None:intergenic 25.0%
! GTTCCAATATTTGATATAGT+AGG + chr8_1:59774349-59774368 Msa1204250:intron 25.0%
! GAAACTCAAATGTAATATGT+AGG - chr8_1:59774492-59774511 None:intergenic 25.0%
!!! TTTTCTTCTTGATTTGTTCA+AGG - chr8_1:59774663-59774682 None:intergenic 25.0%
! TTGTCATGAGTTTATTATCT+TGG + chr8_1:59774961-59774980 Msa1204250:three_prime_UTR 25.0%
! AAATGACATGGTACTTAATA+TGG + chr8_1:59775083-59775102 Msa1204250:three_prime_UTR 25.0%
! TGATCAATGGCTTAAAAAAA+TGG - chr8_1:59775257-59775276 None:intergenic 25.0%
!!! TTTAAAACTCATTTTACGTC+TGG + chr8_1:59775305-59775324 Msa1204250:three_prime_UTR 25.0%
GTGGAAAATTGTAGTGAATT+AGG - chr8_1:59773169-59773188 None:intergenic 30.0%
!! GTTGCTTTGGATTACAATTT+TGG + chr8_1:59773272-59773291 Msa1204250:intron 30.0%
ACATTCACAATTTGAGTAGA+AGG - chr8_1:59773689-59773708 None:intergenic 30.0%
TCAAATTGTGAATGTAGAAC+TGG + chr8_1:59773694-59773713 Msa1204250:intron 30.0%
!! TAGAACTGGATGTCTTATTT+GGG + chr8_1:59773708-59773727 Msa1204250:intron 30.0%
ATTAGCACCTGACTAAAAAT+AGG - chr8_1:59773928-59773947 None:intergenic 30.0%
ATCCAAGAAAATTGTGACAT+AGG + chr8_1:59774079-59774098 Msa1204250:intron 30.0%
! TGACAATACTAATTGGTGAT+TGG - chr8_1:59774131-59774150 None:intergenic 30.0%
CGCTATTTGACAATACTAAT+TGG - chr8_1:59774138-59774157 None:intergenic 30.0%
!! TACAAAGTGTTGTCAAATAG+CGG + chr8_1:59774228-59774247 Msa1204250:intron 30.0%
AGCCCTACTATATCAAATAT+TGG - chr8_1:59774355-59774374 None:intergenic 30.0%
ATTGTATGGTATGCTCAAAT+TGG - chr8_1:59774396-59774415 None:intergenic 30.0%
AATTTGAGCATACCATACAA+TGG + chr8_1:59774395-59774414 Msa1204250:intron 30.0%
ATGGAAAATTGTCCATTGTA+TGG - chr8_1:59774410-59774429 None:intergenic 30.0%
TGAATTCAAACCACTTCAAA+TGG - chr8_1:59774429-59774448 None:intergenic 30.0%
AAGTGGTTTGAATTCATGTT+TGG + chr8_1:59774433-59774452 Msa1204250:intron 30.0%
TTTCCATTATCAGATTACTG+AGG + chr8_1:59774528-59774547 Msa1204250:intron 30.0%
TGTACTTGATAAGACCAAAA+AGG + chr8_1:59774693-59774712 Msa1204250:CDS 30.0%
TAAGGAAGAAAATAAAGGAC+TGG + chr8_1:59774729-59774748 Msa1204250:CDS 30.0%
TTCAAACCAGTATTTGGATA+AGG + chr8_1:59774780-59774799 Msa1204250:CDS 30.0%
ATACCTTGGCGAATTATTTA+TGG + chr8_1:59774936-59774955 Msa1204250:three_prime_UTR 30.0%
AAACCATAAATAATTCGCCA+AGG - chr8_1:59774942-59774961 None:intergenic 30.0%
!! AAAGATTTTGATCACATCAG+TGG + chr8_1:59775020-59775039 Msa1204250:three_prime_UTR 30.0%
!! AAGATTTTGATCACATCAGT+GGG + chr8_1:59775021-59775040 Msa1204250:three_prime_UTR 30.0%
!!! TCTTTTTGAGGTTCAAGATT+TGG + chr8_1:59775051-59775070 Msa1204250:three_prime_UTR 30.0%
TTAATATGGATGAGGAAAAC+AGG + chr8_1:59775097-59775116 Msa1204250:three_prime_UTR 30.0%
CAAAATGATTCTTGTAAGCT+AGG - chr8_1:59775220-59775239 None:intergenic 30.0%
GTGGAAAATTGTAGTGAATT+AGG - chr8_1:59773169-59773188 None:intergenic 30.0%
!! GTTGCTTTGGATTACAATTT+TGG + chr8_1:59773272-59773291 Msa1204250:intron 30.0%
ACATTCACAATTTGAGTAGA+AGG - chr8_1:59773689-59773708 None:intergenic 30.0%
TCAAATTGTGAATGTAGAAC+TGG + chr8_1:59773694-59773713 Msa1204250:intron 30.0%
!! TAGAACTGGATGTCTTATTT+GGG + chr8_1:59773708-59773727 Msa1204250:intron 30.0%
ATTAGCACCTGACTAAAAAT+AGG - chr8_1:59773928-59773947 None:intergenic 30.0%
ATCCAAGAAAATTGTGACAT+AGG + chr8_1:59774079-59774098 Msa1204250:intron 30.0%
! TGACAATACTAATTGGTGAT+TGG - chr8_1:59774131-59774150 None:intergenic 30.0%
CGCTATTTGACAATACTAAT+TGG - chr8_1:59774138-59774157 None:intergenic 30.0%
!! TACAAAGTGTTGTCAAATAG+CGG + chr8_1:59774228-59774247 Msa1204250:intron 30.0%
AGCCCTACTATATCAAATAT+TGG - chr8_1:59774355-59774374 None:intergenic 30.0%
ATTGTATGGTATGCTCAAAT+TGG - chr8_1:59774396-59774415 None:intergenic 30.0%
AATTTGAGCATACCATACAA+TGG + chr8_1:59774395-59774414 Msa1204250:intron 30.0%
ATGGAAAATTGTCCATTGTA+TGG - chr8_1:59774410-59774429 None:intergenic 30.0%
TGAATTCAAACCACTTCAAA+TGG - chr8_1:59774429-59774448 None:intergenic 30.0%
AAGTGGTTTGAATTCATGTT+TGG + chr8_1:59774433-59774452 Msa1204250:intron 30.0%
TTTCCATTATCAGATTACTG+AGG + chr8_1:59774528-59774547 Msa1204250:intron 30.0%
TGTACTTGATAAGACCAAAA+AGG + chr8_1:59774693-59774712 Msa1204250:CDS 30.0%
TAAGGAAGAAAATAAAGGAC+TGG + chr8_1:59774729-59774748 Msa1204250:CDS 30.0%
TTCAAACCAGTATTTGGATA+AGG + chr8_1:59774780-59774799 Msa1204250:CDS 30.0%
ATACCTTGGCGAATTATTTA+TGG + chr8_1:59774936-59774955 Msa1204250:three_prime_UTR 30.0%
AAACCATAAATAATTCGCCA+AGG - chr8_1:59774942-59774961 None:intergenic 30.0%
!! AAAGATTTTGATCACATCAG+TGG + chr8_1:59775020-59775039 Msa1204250:three_prime_UTR 30.0%
!! AAGATTTTGATCACATCAGT+GGG + chr8_1:59775021-59775040 Msa1204250:three_prime_UTR 30.0%
!!! TCTTTTTGAGGTTCAAGATT+TGG + chr8_1:59775051-59775070 Msa1204250:three_prime_UTR 30.0%
TTAATATGGATGAGGAAAAC+AGG + chr8_1:59775097-59775116 Msa1204250:three_prime_UTR 30.0%
CAAAATGATTCTTGTAAGCT+AGG - chr8_1:59775220-59775239 None:intergenic 30.0%
TGAAAAAGGAGTAAAAGAGG+TGG - chr8_1:59773188-59773207 None:intergenic 35.0%
! TTTCATGCTAGTTGTTGCTT+TGG + chr8_1:59773259-59773278 Msa1204250:intron 35.0%
! GTGGTTTTTGCAGTAGATTT+AGG - chr8_1:59773568-59773587 None:intergenic 35.0%
CACATCAAAGAAGAGATCTT+CGG + chr8_1:59773585-59773604 Msa1204250:CDS 35.0%
! GTAGAACTGGATGTCTTATT+TGG + chr8_1:59773707-59773726 Msa1204250:intron 35.0%
! GTCCTATGTCACAATTTTCT+TGG - chr8_1:59774084-59774103 None:intergenic 35.0%
AGAAAATTGTGACATAGGAC+TGG + chr8_1:59774084-59774103 Msa1204250:intron 35.0%
AACAAATCGTCATTGTTCTG+CGG + chr8_1:59774193-59774212 Msa1204250:intron 35.0%
AAATAGCGGTTATAGCATTG+CGG + chr8_1:59774242-59774261 Msa1204250:intron 35.0%
TATGGTATGCTCAAATTGGT+TGG - chr8_1:59774392-59774411 None:intergenic 35.0%
! GGACAATTTTCCATTTGAAG+TGG + chr8_1:59774416-59774435 Msa1204250:intron 35.0%
GAACCTCAGTAATCTGATAA+TGG - chr8_1:59774534-59774553 None:intergenic 35.0%
TTGATAAGACCAAAAAGGAC+TGG + chr8_1:59774698-59774717 Msa1204250:CDS 35.0%
TGATAAGACCAAAAAGGACT+GGG + chr8_1:59774699-59774718 Msa1204250:CDS 35.0%
GAAGAGTTCAAACCAGTATT+TGG + chr8_1:59774774-59774793 Msa1204250:CDS 35.0%
AGGAAACCTTATCCAAATAC+TGG - chr8_1:59774789-59774808 None:intergenic 35.0%
AAATGAAGGCAGTTGAAGTA+TGG + chr8_1:59774908-59774927 Msa1204250:exon 35.0%
!! GTTTATTATCTTGGTGTTCC+TGG + chr8_1:59774970-59774989 Msa1204250:three_prime_UTR 35.0%
!!! AAATGTTTTGGCTTCTGAAG+AGG + chr8_1:59774993-59775012 Msa1204250:three_prime_UTR 35.0%
TGGAATGCTTTCAAATGACA+TGG + chr8_1:59775071-59775090 Msa1204250:three_prime_UTR 35.0%
CATGGTACTTAATATGGATG+AGG + chr8_1:59775089-59775108 Msa1204250:three_prime_UTR 35.0%
GTATATTCATCGATCTCTTC+TGG - chr8_1:59775338-59775357 None:intergenic 35.0%
TGAAAAAGGAGTAAAAGAGG+TGG - chr8_1:59773188-59773207 None:intergenic 35.0%
! TTTCATGCTAGTTGTTGCTT+TGG + chr8_1:59773259-59773278 Msa1204250:intron 35.0%
! GTGGTTTTTGCAGTAGATTT+AGG - chr8_1:59773568-59773587 None:intergenic 35.0%
CACATCAAAGAAGAGATCTT+CGG + chr8_1:59773585-59773604 Msa1204250:CDS 35.0%
! GTAGAACTGGATGTCTTATT+TGG + chr8_1:59773707-59773726 Msa1204250:intron 35.0%
! GTCCTATGTCACAATTTTCT+TGG - chr8_1:59774084-59774103 None:intergenic 35.0%
AGAAAATTGTGACATAGGAC+TGG + chr8_1:59774084-59774103 Msa1204250:intron 35.0%
AACAAATCGTCATTGTTCTG+CGG + chr8_1:59774193-59774212 Msa1204250:intron 35.0%
AAATAGCGGTTATAGCATTG+CGG + chr8_1:59774242-59774261 Msa1204250:intron 35.0%
TATGGTATGCTCAAATTGGT+TGG - chr8_1:59774392-59774411 None:intergenic 35.0%
! GGACAATTTTCCATTTGAAG+TGG + chr8_1:59774416-59774435 Msa1204250:intron 35.0%
GAACCTCAGTAATCTGATAA+TGG - chr8_1:59774534-59774553 None:intergenic 35.0%
TTGATAAGACCAAAAAGGAC+TGG + chr8_1:59774698-59774717 Msa1204250:CDS 35.0%
TGATAAGACCAAAAAGGACT+GGG + chr8_1:59774699-59774718 Msa1204250:CDS 35.0%
GAAGAGTTCAAACCAGTATT+TGG + chr8_1:59774774-59774793 Msa1204250:CDS 35.0%
AGGAAACCTTATCCAAATAC+TGG - chr8_1:59774789-59774808 None:intergenic 35.0%
AAATGAAGGCAGTTGAAGTA+TGG + chr8_1:59774908-59774927 Msa1204250:exon 35.0%
!! GTTTATTATCTTGGTGTTCC+TGG + chr8_1:59774970-59774989 Msa1204250:three_prime_UTR 35.0%
!!! AAATGTTTTGGCTTCTGAAG+AGG + chr8_1:59774993-59775012 Msa1204250:three_prime_UTR 35.0%
TGGAATGCTTTCAAATGACA+TGG + chr8_1:59775071-59775090 Msa1204250:three_prime_UTR 35.0%
CATGGTACTTAATATGGATG+AGG + chr8_1:59775089-59775108 Msa1204250:three_prime_UTR 35.0%
GTATATTCATCGATCTCTTC+TGG - chr8_1:59775338-59775357 None:intergenic 35.0%
!!! TAACATCCTGTTTTGGTTCC+AGG - chr8_1:59773366-59773385 None:intergenic 40.0%
GAACCAAAACAGGATGTTAC+TGG + chr8_1:59773367-59773386 Msa1204250:CDS 40.0%
! TCACCAGTAACATCCTGTTT+TGG - chr8_1:59773373-59773392 None:intergenic 40.0%
AAAACAGGATGTTACTGGTG+AGG + chr8_1:59773372-59773391 Msa1204250:intron 40.0%
AAACAGGATGTTACTGGTGA+GGG + chr8_1:59773373-59773392 Msa1204250:intron 40.0%
! CTAGCAACACAAAGAGCATA+TGG - chr8_1:59773462-59773481 None:intergenic 40.0%
!! AAGCTCAAGTTGATGCCATA+TGG + chr8_1:59773488-59773507 Msa1204250:CDS 40.0%
!! AGCTCAAGTTGATGCCATAT+GGG + chr8_1:59773489-59773508 Msa1204250:CDS 40.0%
CGAAGATCTCTTCTTTGATG+TGG - chr8_1:59773587-59773606 None:intergenic 40.0%
!! CTGGATGTCTTATTTGGGAT+TGG + chr8_1:59773713-59773732 Msa1204250:CDS 40.0%
! CTGACTAAAAATAGGAGCAC+TGG - chr8_1:59773920-59773939 None:intergenic 40.0%
!!! CAGTGCTCCTATTTTTAGTC+AGG + chr8_1:59773918-59773937 Msa1204250:intron 40.0%
GGGAAAAACCTTGTGCATTT+AGG + chr8_1:59773959-59773978 Msa1204250:intron 40.0%
ACCTTGTGCATTTAGGCAAT+AGG + chr8_1:59773966-59773985 Msa1204250:intron 40.0%
CCTTGTGCATTTAGGCAATA+GGG + chr8_1:59773967-59773986 Msa1204250:intron 40.0%
GCAACCCTGTTATAACATAG+TGG + chr8_1:59774164-59774183 Msa1204250:intron 40.0%
ATGTTGTCAATTGCGGATCA+CGG - chr8_1:59774298-59774317 None:intergenic 40.0%
TGATCCGCAATTGACAACAT+TGG + chr8_1:59774298-59774317 Msa1204250:intron 40.0%
GGAACCAATGTTGTCAATTG+CGG - chr8_1:59774305-59774324 None:intergenic 40.0%
GCTTGTGGATTCTGATTCAA+AGG + chr8_1:59774588-59774607 Msa1204250:CDS 40.0%
TGTGGATTCTGATTCAAAGG+AGG + chr8_1:59774591-59774610 Msa1204250:CDS 40.0%
GATAAGACCAAAAAGGACTG+GGG + chr8_1:59774700-59774719 Msa1204250:CDS 40.0%
! AAATTCTCCCCAGTCCTTTT+TGG - chr8_1:59774710-59774729 None:intergenic 40.0%
AAAGGACTGGGGAGAATTTA+AGG + chr8_1:59774711-59774730 Msa1204250:CDS 40.0%
GTAATCTGTTCGCTGCAAAA+AGG - chr8_1:59774809-59774828 None:intergenic 40.0%
AGACGACGCTGTATAAATGA+AGG + chr8_1:59774894-59774913 Msa1204250:exon 40.0%
!! GAAGTATGGAGTTGATACCT+TGG + chr8_1:59774922-59774941 Msa1204250:three_prime_UTR 40.0%
! TGGTGTTCCTGGAAATGTTT+TGG + chr8_1:59774981-59775000 Msa1204250:three_prime_UTR 40.0%
TCAGAAGCCAAAACATTTCC+AGG - chr8_1:59774991-59775010 None:intergenic 40.0%
! GTGGGTGATGATTCTTTTTG+AGG + chr8_1:59775039-59775058 Msa1204250:three_prime_UTR 40.0%
TGTGAATGACATGTTCTCTG+AGG - chr8_1:59775184-59775203 None:intergenic 40.0%
!!! TAACATCCTGTTTTGGTTCC+AGG - chr8_1:59773366-59773385 None:intergenic 40.0%
GAACCAAAACAGGATGTTAC+TGG + chr8_1:59773367-59773386 Msa1204250:CDS 40.0%
! TCACCAGTAACATCCTGTTT+TGG - chr8_1:59773373-59773392 None:intergenic 40.0%
AAAACAGGATGTTACTGGTG+AGG + chr8_1:59773372-59773391 Msa1204250:intron 40.0%
AAACAGGATGTTACTGGTGA+GGG + chr8_1:59773373-59773392 Msa1204250:intron 40.0%
! CTAGCAACACAAAGAGCATA+TGG - chr8_1:59773462-59773481 None:intergenic 40.0%
!! AAGCTCAAGTTGATGCCATA+TGG + chr8_1:59773488-59773507 Msa1204250:CDS 40.0%
!! AGCTCAAGTTGATGCCATAT+GGG + chr8_1:59773489-59773508 Msa1204250:CDS 40.0%
CGAAGATCTCTTCTTTGATG+TGG - chr8_1:59773587-59773606 None:intergenic 40.0%
!! CTGGATGTCTTATTTGGGAT+TGG + chr8_1:59773713-59773732 Msa1204250:CDS 40.0%
! CTGACTAAAAATAGGAGCAC+TGG - chr8_1:59773920-59773939 None:intergenic 40.0%
!!! CAGTGCTCCTATTTTTAGTC+AGG + chr8_1:59773918-59773937 Msa1204250:intron 40.0%
GGGAAAAACCTTGTGCATTT+AGG + chr8_1:59773959-59773978 Msa1204250:intron 40.0%
ACCTTGTGCATTTAGGCAAT+AGG + chr8_1:59773966-59773985 Msa1204250:intron 40.0%
CCTTGTGCATTTAGGCAATA+GGG + chr8_1:59773967-59773986 Msa1204250:intron 40.0%
GCAACCCTGTTATAACATAG+TGG + chr8_1:59774164-59774183 Msa1204250:intron 40.0%
ATGTTGTCAATTGCGGATCA+CGG - chr8_1:59774298-59774317 None:intergenic 40.0%
TGATCCGCAATTGACAACAT+TGG + chr8_1:59774298-59774317 Msa1204250:intron 40.0%
GGAACCAATGTTGTCAATTG+CGG - chr8_1:59774305-59774324 None:intergenic 40.0%
GCTTGTGGATTCTGATTCAA+AGG + chr8_1:59774588-59774607 Msa1204250:CDS 40.0%
TGTGGATTCTGATTCAAAGG+AGG + chr8_1:59774591-59774610 Msa1204250:CDS 40.0%
GATAAGACCAAAAAGGACTG+GGG + chr8_1:59774700-59774719 Msa1204250:CDS 40.0%
! AAATTCTCCCCAGTCCTTTT+TGG - chr8_1:59774710-59774729 None:intergenic 40.0%
AAAGGACTGGGGAGAATTTA+AGG + chr8_1:59774711-59774730 Msa1204250:CDS 40.0%
GTAATCTGTTCGCTGCAAAA+AGG - chr8_1:59774809-59774828 None:intergenic 40.0%
AGACGACGCTGTATAAATGA+AGG + chr8_1:59774894-59774913 Msa1204250:exon 40.0%
!! GAAGTATGGAGTTGATACCT+TGG + chr8_1:59774922-59774941 Msa1204250:three_prime_UTR 40.0%
! TGGTGTTCCTGGAAATGTTT+TGG + chr8_1:59774981-59775000 Msa1204250:three_prime_UTR 40.0%
TCAGAAGCCAAAACATTTCC+AGG - chr8_1:59774991-59775010 None:intergenic 40.0%
! GTGGGTGATGATTCTTTTTG+AGG + chr8_1:59775039-59775058 Msa1204250:three_prime_UTR 40.0%
TGTGAATGACATGTTCTCTG+AGG - chr8_1:59775184-59775203 None:intergenic 40.0%
TCTGTCAAAGAACCTGTTCC+AGG + chr8_1:59773334-59773353 Msa1204250:CDS 45.0%
CTGTCAAAGAACCTGTTCCA+GGG + chr8_1:59773335-59773354 Msa1204250:CDS 45.0%
TGTCAAAGAACCTGTTCCAG+GGG + chr8_1:59773336-59773355 Msa1204250:CDS 45.0%
CCAGGAGATTCAGTTGTCTT+GGG - chr8_1:59773741-59773760 None:intergenic 45.0%
CCAAGACAACTGAATCTCCT+GGG + chr8_1:59773739-59773758 Msa1204250:CDS 45.0%
AAGGCAGTACAAGTGACGAA+GGG + chr8_1:59773796-59773815 Msa1204250:CDS 45.0%
TTTCGTTTCTGCCTCAAGCA+GGG + chr8_1:59773863-59773882 Msa1204250:CDS 45.0%
! AAGGTTTTTCCCACTTCAGC+TGG - chr8_1:59773951-59773970 None:intergenic 45.0%
CCCTATTGCCTAAATGCACA+AGG - chr8_1:59773970-59773989 None:intergenic 45.0%
TGCATTTAGGCAATAGGGAG+AGG + chr8_1:59773972-59773991 Msa1204250:intron 45.0%
CAATTGCGGATCACGGAAAA+TGG - chr8_1:59774291-59774310 None:intergenic 45.0%
TCTGTCAAAGAACCTGTTCC+AGG + chr8_1:59773334-59773353 Msa1204250:CDS 45.0%
CTGTCAAAGAACCTGTTCCA+GGG + chr8_1:59773335-59773354 Msa1204250:CDS 45.0%
TGTCAAAGAACCTGTTCCAG+GGG + chr8_1:59773336-59773355 Msa1204250:CDS 45.0%
CCAGGAGATTCAGTTGTCTT+GGG - chr8_1:59773741-59773760 None:intergenic 45.0%
CCAAGACAACTGAATCTCCT+GGG + chr8_1:59773739-59773758 Msa1204250:CDS 45.0%
AAGGCAGTACAAGTGACGAA+GGG + chr8_1:59773796-59773815 Msa1204250:CDS 45.0%
TTTCGTTTCTGCCTCAAGCA+GGG + chr8_1:59773863-59773882 Msa1204250:CDS 45.0%
! AAGGTTTTTCCCACTTCAGC+TGG - chr8_1:59773951-59773970 None:intergenic 45.0%
CCCTATTGCCTAAATGCACA+AGG - chr8_1:59773970-59773989 None:intergenic 45.0%
TGCATTTAGGCAATAGGGAG+AGG + chr8_1:59773972-59773991 Msa1204250:intron 45.0%
CAATTGCGGATCACGGAAAA+TGG - chr8_1:59774291-59774310 None:intergenic 45.0%
!! TATATATATATATATGAAAA+AGG - chr8_1:59773202-59773221 None:intergenic 5.0%
!! TATATATATATATATGAAAA+AGG - chr8_1:59773202-59773221 None:intergenic 5.0%
!! AAGAGCGCGCAAGGTTTTAC+CGG - chr8_1:59773065-59773084 None:intergenic 50.0%
! GAGAGAAAAAAGAGCGCGCA+AGG - chr8_1:59773074-59773093 None:intergenic 50.0%
GGAAAGCCTGGAACCAAAAC+AGG + chr8_1:59773357-59773376 Msa1204250:CDS 50.0%
CCCAAGACAACTGAATCTCC+TGG + chr8_1:59773738-59773757 Msa1204250:CDS 50.0%
CCCAGGAGATTCAGTTGTCT+TGG - chr8_1:59773742-59773761 None:intergenic 50.0%
TGTGCTCCTCAAAGTGTACC+TGG + chr8_1:59773765-59773784 Msa1204250:CDS 50.0%
AGCACACCAGGTACACTTTG+AGG - chr8_1:59773774-59773793 None:intergenic 50.0%
TCAAAGTGTACCTGGTGTGC+TGG + chr8_1:59773773-59773792 Msa1204250:CDS 50.0%
GAAGGCAGTACAAGTGACGA+AGG + chr8_1:59773795-59773814 Msa1204250:CDS 50.0%
CTTTCGTTTCTGCCTCAAGC+AGG + chr8_1:59773862-59773881 Msa1204250:CDS 50.0%
TTCGTTTCTGCCTCAAGCAG+GGG + chr8_1:59773864-59773883 Msa1204250:CDS 50.0%
AGGTGCTAATCCAGCTGAAG+TGG + chr8_1:59773938-59773957 Msa1204250:intron 50.0%
GGTGCTAATCCAGCTGAAGT+GGG + chr8_1:59773939-59773958 Msa1204250:intron 50.0%
GGATCACGGAAAATGGCAGT+TGG - chr8_1:59774284-59774303 None:intergenic 50.0%
ACTGAGGTTCGAGACTTTGC+TGG + chr8_1:59774544-59774563 Msa1204250:CDS 50.0%
ACCGTGAATTTGAGCGAGAG+AGG + chr8_1:59774827-59774846 Msa1204250:CDS 50.0%
CCCTCTCTCGCTCAAATTCA+CGG - chr8_1:59774831-59774850 None:intergenic 50.0%
CCGTGAATTTGAGCGAGAGA+GGG + chr8_1:59774828-59774847 Msa1204250:CDS 50.0%
CACGATTGGCATTGCAATCC+AGG + chr8_1:59774854-59774873 Msa1204250:CDS 50.0%
TTGCATATCTGGTCGCTTCC+TGG - chr8_1:59774875-59774894 None:intergenic 50.0%
ACAGCGTCGTCTTGCATATC+TGG - chr8_1:59774886-59774905 None:intergenic 50.0%
!! GTTCTCTGAGGCTCACTTCA+TGG - chr8_1:59775172-59775191 None:intergenic 50.0%
! GTTTTACCGGCGGAACTCAT+GGG - chr8_1:59773052-59773071 None:intergenic 50.0%
!! AAGAGCGCGCAAGGTTTTAC+CGG - chr8_1:59773065-59773084 None:intergenic 50.0%
! GAGAGAAAAAAGAGCGCGCA+AGG - chr8_1:59773074-59773093 None:intergenic 50.0%
GGAAAGCCTGGAACCAAAAC+AGG + chr8_1:59773357-59773376 Msa1204250:CDS 50.0%
CCCAAGACAACTGAATCTCC+TGG + chr8_1:59773738-59773757 Msa1204250:CDS 50.0%
CCCAGGAGATTCAGTTGTCT+TGG - chr8_1:59773742-59773761 None:intergenic 50.0%
TGTGCTCCTCAAAGTGTACC+TGG + chr8_1:59773765-59773784 Msa1204250:CDS 50.0%
AGCACACCAGGTACACTTTG+AGG - chr8_1:59773774-59773793 None:intergenic 50.0%
TCAAAGTGTACCTGGTGTGC+TGG + chr8_1:59773773-59773792 Msa1204250:CDS 50.0%
GAAGGCAGTACAAGTGACGA+AGG + chr8_1:59773795-59773814 Msa1204250:CDS 50.0%
CTTTCGTTTCTGCCTCAAGC+AGG + chr8_1:59773862-59773881 Msa1204250:CDS 50.0%
TTCGTTTCTGCCTCAAGCAG+GGG + chr8_1:59773864-59773883 Msa1204250:CDS 50.0%
AGGTGCTAATCCAGCTGAAG+TGG + chr8_1:59773938-59773957 Msa1204250:intron 50.0%
GGTGCTAATCCAGCTGAAGT+GGG + chr8_1:59773939-59773958 Msa1204250:intron 50.0%
GGATCACGGAAAATGGCAGT+TGG - chr8_1:59774284-59774303 None:intergenic 50.0%
ACTGAGGTTCGAGACTTTGC+TGG + chr8_1:59774544-59774563 Msa1204250:CDS 50.0%
ACCGTGAATTTGAGCGAGAG+AGG + chr8_1:59774827-59774846 Msa1204250:CDS 50.0%
CCCTCTCTCGCTCAAATTCA+CGG - chr8_1:59774831-59774850 None:intergenic 50.0%
CCGTGAATTTGAGCGAGAGA+GGG + chr8_1:59774828-59774847 Msa1204250:CDS 50.0%
CACGATTGGCATTGCAATCC+AGG + chr8_1:59774854-59774873 Msa1204250:CDS 50.0%
TTGCATATCTGGTCGCTTCC+TGG - chr8_1:59774875-59774894 None:intergenic 50.0%
ACAGCGTCGTCTTGCATATC+TGG - chr8_1:59774886-59774905 None:intergenic 50.0%
!! GTTCTCTGAGGCTCACTTCA+TGG - chr8_1:59775172-59775191 None:intergenic 50.0%
! TTTGGTTCCAGGCTTTCCCC+TGG - chr8_1:59773355-59773374 None:intergenic 55.0%
AGTGTACCTGGTGTGCTGGA+AGG + chr8_1:59773777-59773796 Msa1204250:CDS 55.0%
TCGTTTCTGCCTCAAGCAGG+GGG + chr8_1:59773865-59773884 Msa1204250:CDS 55.0%
CACAACTTTCCCCCTGCTTG+AGG - chr8_1:59773877-59773896 None:intergenic 55.0%
CTCAAGCAGGGGGAAAGTTG+TGG + chr8_1:59773875-59773894 Msa1204250:CDS 55.0%
! AGCAGAAGGTGCAGGAGCTT+TGG - chr8_1:59774629-59774648 None:intergenic 55.0%
AGGACAGCATCCACAGCAGA+AGG - chr8_1:59774643-59774662 None:intergenic 55.0%
! GGTTTTACCGGCGGAACTCA+TGG - chr8_1:59773053-59773072 None:intergenic 55.0%
! TTTGGTTCCAGGCTTTCCCC+TGG - chr8_1:59773355-59773374 None:intergenic 55.0%
AGTGTACCTGGTGTGCTGGA+AGG + chr8_1:59773777-59773796 Msa1204250:CDS 55.0%
TCGTTTCTGCCTCAAGCAGG+GGG + chr8_1:59773865-59773884 Msa1204250:CDS 55.0%
CACAACTTTCCCCCTGCTTG+AGG - chr8_1:59773877-59773896 None:intergenic 55.0%
CTCAAGCAGGGGGAAAGTTG+TGG + chr8_1:59773875-59773894 Msa1204250:CDS 55.0%
! AGCAGAAGGTGCAGGAGCTT+TGG - chr8_1:59774629-59774648 None:intergenic 55.0%
AGGACAGCATCCACAGCAGA+AGG - chr8_1:59774643-59774662 None:intergenic 55.0%
! AGCGCGCAAGGTTTTACCGG+CGG - chr8_1:59773062-59773081 None:intergenic 60.0%
ACCTGTTCCAGGGGAAAGCC+TGG + chr8_1:59773345-59773364 Msa1204250:CDS 60.0%
TCCAGGCTTTCCCCTGGAAC+AGG - chr8_1:59773349-59773368 None:intergenic 60.0%
! CTTTGAGGAGCACACTGCCC+AGG - chr8_1:59773759-59773778 None:intergenic 60.0%
GTACTGCCTTCCAGCACACC+AGG - chr8_1:59773786-59773805 None:intergenic 60.0%
TGCTGCTGCTGCTCTTGCAG+CGG + chr8_1:59773827-59773846 Msa1204250:CDS 60.0%
AGCTCCTGCACCTTCTGCTG+TGG + chr8_1:59774630-59774649 Msa1204250:CDS 60.0%
! GCATCCACAGCAGAAGGTGC+AGG - chr8_1:59774637-59774656 None:intergenic 60.0%
GCGAGAGAGGGATGCACGAT+TGG + chr8_1:59774840-59774859 Msa1204250:CDS 60.0%
! AGCGCGCAAGGTTTTACCGG+CGG - chr8_1:59773062-59773081 None:intergenic 60.0%
ACCTGTTCCAGGGGAAAGCC+TGG + chr8_1:59773345-59773364 Msa1204250:CDS 60.0%
TCCAGGCTTTCCCCTGGAAC+AGG - chr8_1:59773349-59773368 None:intergenic 60.0%
! CTTTGAGGAGCACACTGCCC+AGG - chr8_1:59773759-59773778 None:intergenic 60.0%
GTACTGCCTTCCAGCACACC+AGG - chr8_1:59773786-59773805 None:intergenic 60.0%
TGCTGCTGCTGCTCTTGCAG+CGG + chr8_1:59773827-59773846 Msa1204250:CDS 60.0%
AGCTCCTGCACCTTCTGCTG+TGG + chr8_1:59774630-59774649 Msa1204250:CDS 60.0%
! GCATCCACAGCAGAAGGTGC+AGG - chr8_1:59774637-59774656 None:intergenic 60.0%
GCGAGAGAGGGATGCACGAT+TGG + chr8_1:59774840-59774859 Msa1204250:CDS 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 59773052 59775380 59773052 ID=Msa1204250;Name=Msa1204250
chr8_1 mRNA 59773052 59775380 59773052 ID=Msa1204250-mRNA-1;Parent=Msa1204250;Name=Msa1204250-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0.75|0.6|0.8|1|1|5|471|257
chr8_1 exon 59773052 59773064 59773052 ID=Msa1204250-mRNA-1:exon:19282;Parent=Msa1204250-mRNA-1
chr8_1 exon 59773308 59773388 59773308 ID=Msa1204250-mRNA-1:exon:19283;Parent=Msa1204250-mRNA-1
chr8_1 exon 59773482 59773606 59773482 ID=Msa1204250-mRNA-1:exon:19284;Parent=Msa1204250-mRNA-1
chr8_1 exon 59773711 59773896 59773711 ID=Msa1204250-mRNA-1:exon:19285;Parent=Msa1204250-mRNA-1
chr8_1 exon 59774541 59775380 59774541 ID=Msa1204250-mRNA-1:exon:19286;Parent=Msa1204250-mRNA-1
chr8_1 CDS 59773052 59773064 59773052 ID=Msa1204250-mRNA-1:cds;Parent=Msa1204250-mRNA-1
chr8_1 CDS 59773308 59773388 59773308 ID=Msa1204250-mRNA-1:cds;Parent=Msa1204250-mRNA-1
chr8_1 CDS 59773482 59773606 59773482 ID=Msa1204250-mRNA-1:cds;Parent=Msa1204250-mRNA-1
chr8_1 CDS 59773711 59773896 59773711 ID=Msa1204250-mRNA-1:cds;Parent=Msa1204250-mRNA-1
chr8_1 CDS 59774541 59774909 59774541 ID=Msa1204250-mRNA-1:cds;Parent=Msa1204250-mRNA-1
chr8_1 three_prime_UTR 59774910 59775380 59774910 ID=Msa1204250-mRNA-1:three_prime_utr;Parent=Msa1204250-mRNA-1
Gene Sequence

>Msa1204250

ATGAGTTCCGCCGATACAATCAATGGAAATTCTGCAAAATCTGTCAAAGAACCTGTTCCAGGGGAAAGCCTGGAACCAAAACAGGATGTTACTGAAGTAAAAGCTCAAGTTGATGCCATATGGGAACAAATGAATAAAGGAGTGTCCAATAAAGTTATTAGCAGTTTTAAAAGCAAGCCTAAATCTACTGCAAAAACCACATCAAAGAAGAGATCTTCGAACTGGATGTCTTATTTGGGATTGGCGCCCAAGACAACTGAATCTCCTGGGCAGTGTGCTCCTCAAAGTGTACCTGGTGTGCTGGAAGGCAGTACAAGTGACGAAGGGAAGAAGTTTGCTGCTGCTGCTCTTGCAGCGGTGAAAGACGATGCTTTCGTTTCTGCCTCAAGCAGGGGGAAAGTTGTGATTACTGAGGTTCGAGACTTTGCTGGTAAAGAAATTGAATATAAAAAGCTTGTGGATTCTGATTCAAAGGAGGCAATTGAAAGAGCCAAAGCTCCTGCACCTTCTGCTGTGGATGCTGTCCTTGAACAAATCAAGAAGAAAACAAAGCTCAGTGTACTTGATAAGACCAAAAAGGACTGGGGAGAATTTAAGGAAGAAAATAAAGGACTGGAAAATGAGCTTGATACTTACAAGAAGAGTTCAAACCAGTATTTGGATAAGGTTTCCTTTTTGCAGCGAACAGATTACCGTGAATTTGAGCGAGAGAGGGATGCACGATTGGCATTGCAATCCAGGAAGCGACCAGATATGCAAGACGACGCTGTATAA

Protein sequence

>Msa1204250

MSSADTINGNSAKSVKEPVPGESLEPKQDVTEVKAQVDAIWEQMNKGVSNKVISSFKSKPKSTAKTTSKKRSSNWMSYLGLAPKTTESPGQCAPQSVPGVLEGSTSDEGKKFAAAALAAVKDDAFVSASSRGKVVITEVRDFAGKEIEYKKLVDSDSKEAIERAKAPAPSAVDAVLEQIKKKTKLSVLDKTKKDWGEFKEENKGLENELDTYKKSSNQYLDKVSFLQRTDYREFERERDARLALQSRKRPDMQDDAV*