Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1023300 | XP_003623196.1 | 79.018 | 224 | 12 | 1 | 1 | 189 | 1 | 224 | 2.08e-118 | 345 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1023300 | sp|P32110|GSTX6_SOYBN | 58.667 | 225 | 57 | 2 | 1 | 189 | 1 | 225 | 1.58e-83 | 249 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1023300 | G7L6H0 | 79.018 | 224 | 12 | 1 | 1 | 189 | 1 | 224 | 9.92e-119 | 345 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007470 | Msa1023300 | 0.808693 | 2.732541e-50 | -8.615850e-47 |
| Msa0009340 | Msa1023300 | 0.818827 | 1.599349e-52 | -8.615850e-47 |
| Msa0012710 | Msa1023300 | 0.816296 | 5.950277e-52 | -8.615850e-47 |
| Msa0015090 | Msa1023300 | 0.800446 | 1.435906e-48 | -8.615850e-47 |
| Msa0017320 | Msa1023300 | 0.830106 | 3.538992e-55 | -8.615850e-47 |
| Msa0042270 | Msa1023300 | 0.828927 | 6.849173e-55 | -8.615850e-47 |
| Msa0049910 | Msa1023300 | 0.809929 | 1.483604e-50 | -8.615850e-47 |
| Msa0051210 | Msa1023300 | 0.802074 | 6.665759e-49 | -8.615850e-47 |
| Msa0051450 | Msa1023300 | 0.813043 | 3.125935e-51 | -8.615850e-47 |
| Msa0055640 | Msa1023300 | 0.810692 | 1.015860e-50 | -8.615850e-47 |
| Msa0056060 | Msa1023300 | 0.804550 | 2.047233e-49 | -8.615850e-47 |
| Msa0061500 | Msa1023300 | 0.830581 | 2.709892e-55 | -8.615850e-47 |
| Msa0065650 | Msa1023300 | 0.811294 | 7.522888e-51 | -8.615850e-47 |
| Msa0092410 | Msa1023300 | 0.819364 | 1.207449e-52 | -8.615850e-47 |
| Msa0101830 | Msa1023300 | 0.819821 | 9.496856e-53 | -8.615850e-47 |
| Msa0103860 | Msa1023300 | 0.800173 | 1.631730e-48 | -8.615850e-47 |
| Msa0107400 | Msa1023300 | 0.802522 | 5.389947e-49 | -8.615850e-47 |
| Msa0654620 | Msa1023300 | 0.811592 | 6.481929e-51 | -8.615850e-47 |
| Msa0679810 | Msa1023300 | 0.805027 | 1.627774e-49 | -8.615850e-47 |
| Msa0692650 | Msa1023300 | 0.833407 | 5.428682e-56 | -8.615850e-47 |
| Msa0742150 | Msa1023300 | 0.862535 | 4.731175e-64 | -8.615850e-47 |
| Msa0770170 | Msa1023300 | 0.806460 | 8.137333e-50 | -8.615850e-47 |
| Msa0771580 | Msa1023300 | 0.810192 | 1.302236e-50 | -8.615850e-47 |
| Msa0775560 | Msa1023300 | 0.840843 | 6.811894e-58 | -8.615850e-47 |
| Msa0786070 | Msa1023300 | 0.870960 | 9.828866e-67 | -8.615850e-47 |
| Msa0786780 | Msa1023300 | 0.818893 | 1.545115e-52 | -8.615850e-47 |
| Msa0788540 | Msa1023300 | 0.818807 | 1.616354e-52 | -8.615850e-47 |
| Msa0805910 | Msa1023300 | 0.815592 | 8.544303e-52 | -8.615850e-47 |
| Msa0805920 | Msa1023300 | 0.818840 | 1.588560e-52 | -8.615850e-47 |
| Msa0812950 | Msa1023300 | 0.845773 | 3.295605e-59 | -8.615850e-47 |
| Msa0823440 | Msa1023300 | 0.851945 | 6.376572e-61 | -8.615850e-47 |
| Msa0138020 | Msa1023300 | 0.814238 | 1.705916e-51 | -8.615850e-47 |
| Msa0142280 | Msa1023300 | 0.814386 | 1.581704e-51 | -8.615850e-47 |
| Msa0152560 | Msa1023300 | 0.839918 | 1.188451e-57 | -8.615850e-47 |
| Msa0153980 | Msa1023300 | 0.805767 | 1.138650e-49 | -8.615850e-47 |
| Msa0155340 | Msa1023300 | 0.838397 | 2.946831e-57 | -8.615850e-47 |
| Msa0164910 | Msa1023300 | 0.806204 | 9.214940e-50 | -8.615850e-47 |
| Msa0187310 | Msa1023300 | 0.814711 | 1.340710e-51 | -8.615850e-47 |
| Msa0187920 | Msa1023300 | 0.812334 | 4.467610e-51 | -8.615850e-47 |
| Msa0189610 | Msa1023300 | 0.830656 | 2.596626e-55 | -8.615850e-47 |
| Msa0194530 | Msa1023300 | 0.815435 | 9.257493e-52 | -8.615850e-47 |
| Msa0196670 | Msa1023300 | 0.812977 | 3.231670e-51 | -8.615850e-47 |
| Msa0225470 | Msa1023300 | 0.829767 | 4.280765e-55 | -8.615850e-47 |
| Msa0236070 | Msa1023300 | 0.818625 | 1.777727e-52 | -8.615850e-47 |
| Msa0364790 | Msa1023300 | 0.843756 | 1.151903e-58 | -8.615850e-47 |
| Msa0371950 | Msa1023300 | 0.828291 | 9.755636e-55 | -8.615850e-47 |
| Msa0410580 | Msa1023300 | 0.803818 | 2.906756e-49 | -8.615850e-47 |
| Msa0438040 | Msa1023300 | 0.808665 | 2.770478e-50 | -8.615850e-47 |
| Msa0456770 | Msa1023300 | 0.819519 | 1.113170e-52 | -8.615850e-47 |
| Msa0481280 | Msa1023300 | 0.814407 | 1.565232e-51 | -8.615850e-47 |
| Msa1013070 | Msa1023300 | 0.808213 | 3.459000e-50 | -8.615850e-47 |
| Msa1023300 | Msa1023310 | 0.867771 | 1.069955e-65 | -8.615850e-47 |
| Msa1023300 | Msa1054510 | 0.825008 | 5.923662e-54 | -8.615850e-47 |
| Msa1023300 | Msa1062020 | 0.952943 | 8.103707e-111 | -8.615850e-47 |
| Msa1023300 | Msa1062030 | 0.909500 | 5.319851e-82 | -8.615850e-47 |
| Msa1023300 | Msa1062040 | 0.824646 | 7.212301e-54 | -8.615850e-47 |
| Msa1023300 | Msa1094280 | 0.816940 | 4.267795e-52 | -8.615850e-47 |
| Msa1023300 | Msa1107190 | 0.862294 | 5.612837e-64 | -8.615850e-47 |
| Msa1023300 | Msa1107200 | 0.835952 | 1.243539e-56 | -8.615850e-47 |
| Msa1023300 | Msa1115280 | 0.808975 | 2.378109e-50 | -8.615850e-47 |
| Msa1023300 | Msa1138530 | 0.804356 | 2.246362e-49 | -8.615850e-47 |
| Msa1023300 | Msa1144040 | 0.807522 | 4.850674e-50 | -8.615850e-47 |
| Msa1023300 | Msa1150780 | 0.805535 | 1.273532e-49 | -8.615850e-47 |
| Msa1023300 | Msa1150790 | 0.888822 | 4.199349e-73 | -8.615850e-47 |
| Msa1023300 | Msa1150800 | 0.981219 | 4.650871e-152 | -8.615850e-47 |
| Msa1023300 | Msa1150810 | 0.957476 | 2.475018e-115 | -8.615850e-47 |
| Msa1023300 | Msa1182430 | 0.818671 | 1.735679e-52 | -8.615850e-47 |
| Msa1023300 | Msa1220880 | 0.800381 | 1.479922e-48 | -8.615850e-47 |
| Msa1023300 | Msa1224200 | 0.801919 | 7.173572e-49 | -8.615850e-47 |
| Msa1023300 | Msa1246700 | 0.818526 | 1.872551e-52 | -8.615850e-47 |
| Msa1023300 | Msa1270660 | 0.811447 | 6.970843e-51 | -8.615850e-47 |
| Msa1023300 | Msa1276340 | 0.803982 | 2.687841e-49 | -8.615850e-47 |
| Msa1023300 | Msa1279480 | 0.829728 | 4.375178e-55 | -8.615850e-47 |
| Msa1023300 | Msa1280170 | 0.813124 | 3.000080e-51 | -8.615850e-47 |
| Msa1023300 | Msa1291450 | 0.812673 | 3.766035e-51 | -8.615850e-47 |
| Msa1023300 | Msa1307180 | 0.802223 | 6.211675e-49 | -8.615850e-47 |
| Msa1023300 | Msa1316360 | 0.813360 | 2.662042e-51 | -8.615850e-47 |
| Msa1023300 | Msa1335230 | 0.807363 | 5.242136e-50 | -8.615850e-47 |
| Msa1023300 | Msa1338400 | 0.811562 | 6.580964e-51 | -8.615850e-47 |
| Msa1023300 | Msa1347330 | 0.833818 | 4.284982e-56 | -8.615850e-47 |
| Msa1023300 | Msa1352660 | 0.818637 | 1.766909e-52 | -8.615850e-47 |
| Msa1023300 | Msa1355890 | 0.858744 | 6.677453e-63 | -8.615850e-47 |
| Msa1023300 | Msa1365270 | 0.804103 | 2.536300e-49 | -8.615850e-47 |
| Msa1023300 | Msa1372280 | 0.809110 | 2.224489e-50 | -8.615850e-47 |
| Msa1023300 | Msa1376450 | 0.803220 | 3.867894e-49 | -8.615850e-47 |
| Msa1023300 | Msa1377080 | 0.801938 | 7.110021e-49 | -8.615850e-47 |
| Msa1023300 | Msa1420270 | 0.801222 | 9.970261e-49 | -8.615850e-47 |
| Msa1023300 | Msa1421210 | 0.841295 | 5.183052e-58 | -8.615850e-47 |
| Msa1023300 | Msa1430130 | 0.837370 | 5.410314e-57 | -8.615850e-47 |
| Msa1023300 | Msa1430550 | 0.803912 | 2.779285e-49 | -8.615850e-47 |
| Msa1023300 | Msa1448700 | 0.817122 | 3.884468e-52 | -8.615850e-47 |
| Msa1023300 | Msa1457160 | 0.803664 | 3.129109e-49 | -8.615850e-47 |
| Msa1023300 | Msa1460750 | 0.838796 | 2.323596e-57 | -8.615850e-47 |
| Msa1023300 | Msa1460800 | 0.801514 | 8.685073e-49 | -8.615850e-47 |
| Msa1023300 | Msa1462360 | 0.811587 | 6.498332e-51 | -8.615850e-47 |
| Msa1023300 | Msa1463600 | 0.807371 | 5.222269e-50 | -8.615850e-47 |
| Msa0244140 | Msa1023300 | 0.814330 | 1.627996e-51 | -8.615850e-47 |
| Msa0244190 | Msa1023300 | 0.820535 | 6.514660e-53 | -8.615850e-47 |
| Msa0268140 | Msa1023300 | 0.819918 | 9.024252e-53 | -8.615850e-47 |
| Msa0269560 | Msa1023300 | 0.804036 | 2.619492e-49 | -8.615850e-47 |
| Msa0271550 | Msa1023300 | 0.817032 | 4.068358e-52 | -8.615850e-47 |
| Msa0299000 | Msa1023300 | 0.818669 | 1.737034e-52 | -8.615850e-47 |
| Msa0310440 | Msa1023300 | 0.802096 | 6.598373e-49 | -8.615850e-47 |
| Msa0319290 | Msa1023300 | 0.838026 | 3.672337e-57 | -8.615850e-47 |
| Msa0321080 | Msa1023300 | 0.812376 | 4.374177e-51 | -8.615850e-47 |
| Msa0524440 | Msa1023300 | 0.801552 | 8.533867e-49 | -8.615850e-47 |
| Msa0545290 | Msa1023300 | 0.805379 | 1.373538e-49 | -8.615850e-47 |
| Msa0600890 | Msa1023300 | 0.802760 | 4.814203e-49 | -8.615850e-47 |
| Msa0847470 | Msa1023300 | 0.818495 | 1.902239e-52 | -8.615850e-47 |
| Msa0853440 | Msa1023300 | 0.842919 | 1.927237e-58 | -8.615850e-47 |
| Msa0862280 | Msa1023300 | 0.829531 | 4.887904e-55 | -8.615850e-47 |
| Msa0882400 | Msa1023300 | 0.834964 | 2.209760e-56 | -8.615850e-47 |
| Msa0898320 | Msa1023300 | 0.812858 | 3.431590e-51 | -8.615850e-47 |
| Msa0932100 | Msa1023300 | 0.839179 | 1.850104e-57 | -8.615850e-47 |
| Msa0932190 | Msa1023300 | 0.821063 | 4.926839e-53 | -8.615850e-47 |
| Msa0947480 | Msa1023300 | 0.815526 | 8.837101e-52 | -8.615850e-47 |
| Msa0970230 | Msa1023300 | 0.841664 | 4.142181e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1023300 | MtrunA17_Chr7g0240581 | 79.018 | 224 | 12 | 1 | 1 | 189 | 1 | 224 | 1.91e-122 | 345 |
| Msa1023300 | MtrunA17_Chr7g0240561 | 66.071 | 224 | 41 | 1 | 1 | 189 | 1 | 224 | 3.11e-101 | 291 |
| Msa1023300 | MtrunA17_Chr7g0240551 | 64.286 | 224 | 45 | 1 | 1 | 189 | 1 | 224 | 4.97e-97 | 280 |
| Msa1023300 | MtrunA17_Chr7g0240531 | 61.161 | 224 | 52 | 1 | 1 | 189 | 1 | 224 | 2.75e-91 | 266 |
| Msa1023300 | MtrunA17_Chr7g0240541 | 60.268 | 224 | 54 | 1 | 1 | 189 | 1 | 224 | 3.52e-88 | 258 |
| Msa1023300 | MtrunA17_Chr7g0240511 | 61.607 | 224 | 46 | 2 | 1 | 189 | 1 | 219 | 6.55e-88 | 257 |
| Msa1023300 | MtrunA17_Chr7g0240521 | 64.000 | 225 | 45 | 2 | 1 | 189 | 8 | 232 | 1.82e-85 | 251 |
| Msa1023300 | MtrunA17_Chr7g0240681 | 56.444 | 225 | 62 | 2 | 1 | 189 | 1 | 225 | 2.92e-82 | 243 |
| Msa1023300 | MtrunA17_Chr7g0240631 | 55.157 | 223 | 65 | 1 | 1 | 188 | 1 | 223 | 3.63e-82 | 243 |
| Msa1023300 | MtrunA17_Chr7g0240641 | 55.157 | 223 | 65 | 1 | 1 | 188 | 1 | 223 | 1.83e-81 | 241 |
| Msa1023300 | MtrunA17_Chr4g0008791 | 50.673 | 223 | 75 | 1 | 1 | 188 | 1 | 223 | 2.68e-75 | 225 |
| Msa1023300 | MtrunA17_Chr7g0240691 | 50.685 | 219 | 72 | 2 | 6 | 188 | 36 | 254 | 7.53e-73 | 220 |
| Msa1023300 | MtrunA17_Chr7g0240611 | 52.915 | 223 | 66 | 2 | 1 | 188 | 1 | 219 | 4.52e-72 | 217 |
| Msa1023300 | MtrunA17_Chr4g0008781 | 51.174 | 213 | 69 | 3 | 3 | 180 | 4 | 216 | 6.36e-66 | 201 |
| Msa1023300 | MtrunA17_Chr7g0240671 | 50.725 | 207 | 63 | 2 | 8 | 179 | 5 | 207 | 1.96e-62 | 192 |
| Msa1023300 | MtrunA17_Chr7g0240651 | 52.703 | 222 | 66 | 2 | 1 | 187 | 1 | 218 | 1.12e-60 | 188 |
| Msa1023300 | MtrunA17_Chr7g0240661 | 50.935 | 214 | 66 | 2 | 1 | 179 | 1 | 210 | 8.88e-55 | 173 |
| Msa1023300 | MtrunA17_Chr1g0196771 | 38.073 | 218 | 99 | 3 | 6 | 187 | 2 | 219 | 3.53e-44 | 146 |
| Msa1023300 | MtrunA17_Chr8g0379581 | 34.562 | 217 | 107 | 3 | 4 | 185 | 2 | 218 | 4.69e-38 | 130 |
| Msa1023300 | MtrunA17_Chr5g0417011 | 34.842 | 221 | 103 | 3 | 1 | 180 | 1 | 221 | 6.83e-37 | 127 |
| Msa1023300 | MtrunA17_Chr1g0212301 | 36.150 | 213 | 98 | 3 | 7 | 181 | 3 | 215 | 1.17e-36 | 127 |
| Msa1023300 | MtrunA17_Chr6g0483141 | 37.379 | 206 | 94 | 3 | 8 | 178 | 4 | 209 | 4.00e-36 | 125 |
| Msa1023300 | MtrunA17_Chr3g0132581 | 37.443 | 219 | 102 | 3 | 5 | 188 | 3 | 221 | 2.81e-35 | 123 |
| Msa1023300 | MtrunA17_Chr8g0379561 | 36.574 | 216 | 101 | 4 | 1 | 181 | 1 | 215 | 6.69e-35 | 122 |
| Msa1023300 | MtrunA17_Chr1g0196691 | 33.182 | 220 | 107 | 5 | 8 | 188 | 29 | 247 | 3.06e-32 | 116 |
| Msa1023300 | MtrunA17_Chr1g0196661 | 34.545 | 220 | 105 | 5 | 8 | 189 | 4 | 222 | 4.83e-32 | 115 |
| Msa1023300 | MtrunA17_Chr1g0196721 | 35.000 | 220 | 104 | 5 | 7 | 188 | 2 | 220 | 1.02e-31 | 114 |
| Msa1023300 | MtrunA17_Chr5g0415411 | 33.182 | 220 | 102 | 3 | 1 | 177 | 1 | 218 | 2.25e-30 | 110 |
| Msa1023300 | MtrunA17_Chr8g0363751 | 35.160 | 219 | 99 | 4 | 5 | 180 | 3 | 221 | 6.90e-30 | 109 |
| Msa1023300 | MtrunA17_Chr4g0029341 | 32.075 | 212 | 107 | 3 | 6 | 180 | 3 | 214 | 4.57e-29 | 107 |
| Msa1023300 | MtrunA17_Chr1g0196711 | 32.692 | 208 | 101 | 4 | 8 | 177 | 4 | 210 | 2.70e-28 | 105 |
| Msa1023300 | MtrunA17_Chr2g0312781 | 31.250 | 208 | 105 | 4 | 1 | 172 | 15 | 220 | 6.77e-22 | 89.0 |
| Msa1023300 | MtrunA17_Chr2g0312751 | 29.630 | 216 | 111 | 5 | 6 | 182 | 3 | 216 | 4.18e-21 | 86.7 |
| Msa1023300 | MtrunA17_Chr2g0312771 | 29.808 | 208 | 108 | 4 | 6 | 177 | 3 | 208 | 8.83e-21 | 85.9 |
| Msa1023300 | MtrunA17_Chr2g0312731 | 31.034 | 203 | 102 | 5 | 6 | 172 | 3 | 203 | 1.11e-20 | 85.5 |
| Msa1023300 | MtrunA17_Chr3g0107731 | 33.166 | 199 | 95 | 4 | 7 | 169 | 9 | 205 | 1.84e-20 | 85.1 |
| Msa1023300 | MtrunA17_Chr3g0107741 | 31.683 | 202 | 100 | 4 | 4 | 169 | 6 | 205 | 7.20e-20 | 83.6 |
| Msa1023300 | MtrunA17_Chr2g0312791 | 29.902 | 204 | 104 | 3 | 6 | 172 | 3 | 204 | 7.56e-20 | 83.2 |
| Msa1023300 | MtrunA17_Chr5g0433801 | 32.524 | 206 | 101 | 5 | 3 | 172 | 2 | 205 | 5.24e-19 | 81.3 |
| Msa1023300 | MtrunA17_Chr8g0357241 | 32.447 | 188 | 89 | 4 | 6 | 157 | 3 | 188 | 5.87e-18 | 78.2 |
| Msa1023300 | MtrunA17_Chr8g0357211 | 32.620 | 187 | 88 | 4 | 6 | 156 | 3 | 187 | 1.04e-17 | 77.8 |
| Msa1023300 | MtrunA17_Chr2g0312811 | 29.524 | 210 | 108 | 5 | 6 | 177 | 3 | 210 | 2.01e-17 | 77.0 |
| Msa1023300 | MtrunA17_Chr2g0312681 | 30.846 | 201 | 101 | 6 | 8 | 172 | 5 | 203 | 3.89e-17 | 76.3 |
| Msa1023300 | MtrunA17_Chr8g0391631 | 50.704 | 71 | 33 | 1 | 7 | 75 | 21 | 91 | 1.51e-16 | 73.6 |
| Msa1023300 | MtrunA17_Chr2g0312721 | 29.268 | 205 | 107 | 4 | 6 | 174 | 3 | 205 | 2.25e-16 | 73.9 |
| Msa1023300 | MtrunA17_Chr2g0312691 | 30.808 | 198 | 99 | 6 | 8 | 169 | 5 | 200 | 3.47e-16 | 73.6 |
| Msa1023300 | MtrunA17_Chr4g0069471 | 32.768 | 177 | 82 | 4 | 3 | 142 | 21 | 197 | 1.28e-15 | 71.6 |
| Msa1023300 | MtrunA17_Chr2g0312711 | 30.244 | 205 | 106 | 6 | 8 | 177 | 5 | 207 | 1.44e-13 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1023300 | AT3G09270.1 | 41.964 | 224 | 91 | 4 | 3 | 188 | 2 | 224 | 6.25e-52 | 166 |
| Msa1023300 | AT2G29420.1 | 39.908 | 218 | 96 | 3 | 3 | 185 | 5 | 222 | 4.04e-46 | 151 |
| Msa1023300 | AT2G29490.1 | 38.942 | 208 | 91 | 4 | 1 | 172 | 1 | 208 | 7.89e-34 | 120 |
| Msa1023300 | AT2G29460.1 | 37.557 | 221 | 102 | 6 | 1 | 185 | 1 | 221 | 3.72e-32 | 115 |
| Msa1023300 | AT2G29450.1 | 35.874 | 223 | 106 | 4 | 3 | 188 | 2 | 224 | 1.44e-31 | 114 |
| Msa1023300 | AT2G29480.1 | 37.500 | 208 | 94 | 5 | 1 | 172 | 1 | 208 | 1.14e-30 | 112 |
| Msa1023300 | AT1G10370.1 | 36.019 | 211 | 91 | 4 | 1 | 169 | 1 | 209 | 2.15e-30 | 111 |
| Msa1023300 | AT2G29440.1 | 34.375 | 224 | 110 | 5 | 1 | 188 | 1 | 223 | 4.09e-30 | 110 |
| Msa1023300 | AT1G10360.1 | 34.466 | 206 | 93 | 3 | 6 | 169 | 4 | 209 | 1.99e-29 | 108 |
| Msa1023300 | AT2G29470.1 | 37.799 | 209 | 93 | 6 | 1 | 172 | 1 | 209 | 2.04e-29 | 108 |
| Msa1023300 | AT1G69930.1 | 30.973 | 226 | 111 | 3 | 2 | 184 | 7 | 230 | 2.95e-26 | 100 |
| Msa1023300 | AT5G62480.1 | 31.818 | 220 | 106 | 4 | 5 | 180 | 6 | 225 | 1.77e-25 | 99.0 |
| Msa1023300 | AT5G62480.2 | 33.333 | 195 | 110 | 4 | 5 | 180 | 6 | 199 | 7.20e-25 | 96.7 |
| Msa1023300 | AT1G59700.1 | 33.945 | 218 | 101 | 3 | 5 | 179 | 4 | 221 | 1.44e-24 | 96.3 |
| Msa1023300 | AT5G62480.3 | 33.846 | 195 | 108 | 5 | 5 | 180 | 6 | 198 | 5.52e-24 | 94.4 |
| Msa1023300 | AT1G27130.1 | 30.667 | 225 | 112 | 5 | 1 | 182 | 1 | 224 | 7.53e-24 | 94.4 |
| Msa1023300 | AT1G59670.1 | 32.692 | 208 | 97 | 4 | 5 | 169 | 4 | 211 | 1.40e-23 | 94.0 |
| Msa1023300 | AT1G53680.1 | 31.905 | 210 | 103 | 4 | 1 | 172 | 1 | 208 | 5.92e-23 | 92.0 |
| Msa1023300 | AT1G74590.1 | 29.204 | 226 | 120 | 4 | 1 | 186 | 1 | 226 | 4.99e-22 | 89.7 |
| Msa1023300 | AT1G78370.1 | 31.373 | 204 | 102 | 4 | 10 | 177 | 7 | 208 | 8.41e-22 | 88.6 |
| Msa1023300 | AT1G78320.1 | 32.367 | 207 | 102 | 5 | 5 | 175 | 2 | 206 | 1.12e-21 | 88.6 |
| Msa1023300 | AT1G69920.1 | 31.004 | 229 | 109 | 6 | 1 | 182 | 26 | 252 | 1.51e-21 | 89.0 |
| Msa1023300 | AT1G78320.2 | 33.702 | 181 | 107 | 4 | 5 | 175 | 2 | 179 | 2.74e-21 | 86.7 |
| Msa1023300 | AT1G27140.1 | 30.837 | 227 | 112 | 5 | 1 | 183 | 1 | 226 | 2.86e-20 | 85.1 |
| Msa1023300 | AT1G78380.1 | 30.435 | 207 | 104 | 4 | 8 | 177 | 5 | 208 | 4.58e-20 | 84.3 |
| Msa1023300 | AT1G17170.1 | 30.233 | 215 | 113 | 5 | 6 | 185 | 3 | 215 | 1.22e-19 | 83.2 |
| Msa1023300 | AT1G78340.1 | 32.370 | 173 | 81 | 3 | 6 | 142 | 3 | 175 | 6.36e-19 | 81.3 |
| Msa1023300 | AT1G78360.1 | 30.288 | 208 | 104 | 5 | 8 | 177 | 5 | 209 | 6.59e-17 | 75.9 |
| Msa1023300 | AT1G17190.1 | 30.047 | 213 | 109 | 5 | 1 | 177 | 1 | 209 | 3.84e-16 | 73.9 |
Find 39 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGCTTAAGGATAATTTCTT+TGG | 0.282538 | 7_1:+50666978 | Msa1023300:CDS |
| ACAGGAACCTTCTTGTAAAC+AGG | 0.304362 | 7_1:-50665805 | None:intergenic |
| GCCTCCTAGAGAAGGACTTT+TGG | 0.337294 | 7_1:+50667166 | Msa1023300:CDS |
| AATTCTTGAGAATGAGCTTA+AGG | 0.354197 | 7_1:+50666965 | Msa1023300:CDS |
| TTCTTTGGTGGAGAGGAGAT+TGG | 0.368042 | 7_1:+50666993 | Msa1023300:CDS |
| GGCAATTTATCCTTAACAAC+TGG | 0.375316 | 7_1:-50667146 | None:intergenic |
| TTGACTCCATTTGTAAAGCT+TGG | 0.384299 | 7_1:-50667108 | None:intergenic |
| CACCAACCATCCAGTTGTTA+AGG | 0.388600 | 7_1:+50667136 | Msa1023300:CDS |
| CGCTAAGATGGCATCAAATC+AGG | 0.389304 | 7_1:+50665645 | None:intergenic |
| TGACTCCATTTGTAAAGCTT+GGG | 0.390868 | 7_1:-50667107 | None:intergenic |
| TTTGTTGCTTCTTGTACAAT+GGG | 0.408906 | 7_1:-50667056 | None:intergenic |
| TACAAATATGAGTTAGAAAA+GGG | 0.419037 | 7_1:+50665748 | Msa1023300:CDS |
| GTTTGTTGCTTCTTGTACAA+TGG | 0.430175 | 7_1:-50667057 | None:intergenic |
| ATCACAAGGGATTCTGATAT+AGG | 0.433145 | 7_1:-50665847 | None:intergenic |
| ATCTCCACCCTGCTCACAAA+TGG | 0.436953 | 7_1:-50665700 | None:intergenic |
| ATACAAATATGAGTTAGAAA+AGG | 0.446746 | 7_1:+50665747 | Msa1023300:CDS |
| CTTAAGGATAATTTCTTTGG+TGG | 0.454634 | 7_1:+50666981 | Msa1023300:CDS |
| GGAGATTGCTCTAACATTGA+AGG | 0.460355 | 7_1:+50665717 | Msa1023300:CDS |
| AATTTCCCAAGCTTTACAAA+TGG | 0.474830 | 7_1:+50667102 | Msa1023300:CDS |
| ATCCTTAACAACTGGATGGT+TGG | 0.488666 | 7_1:-50667138 | None:intergenic |
| TTATCATTATGAACTAATAC+AGG | 0.517988 | 7_1:-50665823 | None:intergenic |
| GGATAATTTCTTTGGTGGAG+AGG | 0.526031 | 7_1:+50666986 | Msa1023300:CDS |
| GATAAATTGCCTCCTAGAGA+AGG | 0.547220 | 7_1:+50667158 | Msa1023300:CDS |
| TGGCAAGTCCATTTGTGAGC+AGG | 0.549506 | 7_1:+50665692 | Msa1023300:CDS |
| TAAGCCAAAAGTCCTTCTCT+AGG | 0.550201 | 7_1:-50667170 | None:intergenic |
| CAGGAACCTTCTTGTAAACA+GGG | 0.551890 | 7_1:-50665804 | None:intergenic |
| AGAACGTGAGAAAGCTATTG+AGG | 0.557970 | 7_1:+50666923 | Msa1023300:CDS |
| ATTTATCCTTAACAACTGGA+TGG | 0.561475 | 7_1:-50667142 | None:intergenic |
| AATATGAGTTAGAAAAGGGA+GGG | 0.564400 | 7_1:+50665752 | Msa1023300:CDS |
| ATACAACCCTGTTTACAAGA+AGG | 0.566628 | 7_1:+50665798 | Msa1023300:CDS |
| GGCAAGTCCATTTGTGAGCA+GGG | 0.574715 | 7_1:+50665693 | Msa1023300:CDS |
| AAATATGAGTTAGAAAAGGG+AGG | 0.578650 | 7_1:+50665751 | Msa1023300:CDS |
| GAGATTGCTCTAACATTGAA+GGG | 0.597295 | 7_1:+50665718 | Msa1023300:CDS |
| CGACATACTCAAGAATCACA+AGG | 0.607291 | 7_1:-50665861 | None:intergenic |
| GCCAAAAGTCCTTCTCTAGG+AGG | 0.619286 | 7_1:-50667167 | None:intergenic |
| ACCAGTGTTTAAGTGCTGCA+CGG | 0.628510 | 7_1:+50666874 | Msa1023300:intron |
| TTGTTGCTTCTTGTACAATG+GGG | 0.684989 | 7_1:-50667055 | None:intergenic |
| GACATACTCAAGAATCACAA+GGG | 0.702786 | 7_1:-50665860 | None:intergenic |
| AAGTCCATTTGTGAGCAGGG+TGG | 0.747804 | 7_1:+50665696 | Msa1023300:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGTTTTCATTTTTAAATTA+CGG | + | chr7_1:50666377-50666396 | Msa1023300:intron | 10.0% |
| !!! | TACTTTTCTTTTTAAAATTA+CGG | - | chr7_1:50666506-50666525 | None:intergenic | 10.0% |
| !!! | TAGTTTTCATTTTTAAATTA+CGG | + | chr7_1:50666377-50666396 | Msa1023300:intron | 10.0% |
| !!! | TACTTTTCTTTTTAAAATTA+CGG | - | chr7_1:50666506-50666525 | None:intergenic | 10.0% |
| !! | AATAAATATGATATTTGAAG+CGG | - | chr7_1:50666610-50666629 | None:intergenic | 15.0% |
| !! | AATATTTAAGAAGAATAATC+TGG | + | chr7_1:50666740-50666759 | Msa1023300:intron | 15.0% |
| !! | AATAAATATGATATTTGAAG+CGG | - | chr7_1:50666610-50666629 | None:intergenic | 15.0% |
| !! | AATATTTAAGAAGAATAATC+TGG | + | chr7_1:50666740-50666759 | Msa1023300:intron | 15.0% |
| !! | ATACAAATATGAGTTAGAAA+AGG | + | chr7_1:50665747-50665766 | Msa1023300:CDS | 20.0% |
| !! | TACAAATATGAGTTAGAAAA+GGG | + | chr7_1:50665748-50665767 | Msa1023300:CDS | 20.0% |
| !! | TTATCATTATGAACTAATAC+AGG | - | chr7_1:50665826-50665845 | None:intergenic | 20.0% |
| !!! | TCACTTTTAAAGTGTATAAA+TGG | + | chr7_1:50666051-50666070 | Msa1023300:intron | 20.0% |
| !!! | ACACTGGTTTTAAAAAATTA+AGG | - | chr7_1:50666862-50666881 | None:intergenic | 20.0% |
| !! | ATACAAATATGAGTTAGAAA+AGG | + | chr7_1:50665747-50665766 | Msa1023300:CDS | 20.0% |
| !! | TACAAATATGAGTTAGAAAA+GGG | + | chr7_1:50665748-50665767 | Msa1023300:CDS | 20.0% |
| !! | TTATCATTATGAACTAATAC+AGG | - | chr7_1:50665826-50665845 | None:intergenic | 20.0% |
| !!! | TCACTTTTAAAGTGTATAAA+TGG | + | chr7_1:50666051-50666070 | Msa1023300:intron | 20.0% |
| !!! | ACACTGGTTTTAAAAAATTA+AGG | - | chr7_1:50666862-50666881 | None:intergenic | 20.0% |
| ! | TGTATATTATATGCAGAGAT+CGG | - | chr7_1:50666096-50666115 | None:intergenic | 25.0% |
| ! | TAAAATATTTCACAAGCATG+TGG | + | chr7_1:50666186-50666205 | Msa1023300:intron | 25.0% |
| !!! | ATGTATTGTTTTTCTCTATG+CGG | - | chr7_1:50666263-50666282 | None:intergenic | 25.0% |
| ! | ATAGAGAAAAACAATACATG+TGG | + | chr7_1:50666264-50666283 | Msa1023300:intron | 25.0% |
| ! | TTATTCAACAAAACGAGTAA+CGG | + | chr7_1:50666625-50666644 | Msa1023300:intron | 25.0% |
| ! | ATGACTATTATATATGCATG+TGG | + | chr7_1:50666648-50666667 | Msa1023300:intron | 25.0% |
| !! | TGAAATATAATGACTTGTGA+CGG | - | chr7_1:50666697-50666716 | None:intergenic | 25.0% |
| ! | TGTATATTATATGCAGAGAT+CGG | - | chr7_1:50666096-50666115 | None:intergenic | 25.0% |
| ! | TAAAATATTTCACAAGCATG+TGG | + | chr7_1:50666186-50666205 | Msa1023300:intron | 25.0% |
| !!! | ATGTATTGTTTTTCTCTATG+CGG | - | chr7_1:50666263-50666282 | None:intergenic | 25.0% |
| ! | ATAGAGAAAAACAATACATG+TGG | + | chr7_1:50666264-50666283 | Msa1023300:intron | 25.0% |
| ! | TTATTCAACAAAACGAGTAA+CGG | + | chr7_1:50666625-50666644 | Msa1023300:intron | 25.0% |
| ! | ATGACTATTATATATGCATG+TGG | + | chr7_1:50666648-50666667 | Msa1023300:intron | 25.0% |
| !! | TGAAATATAATGACTTGTGA+CGG | - | chr7_1:50666697-50666716 | None:intergenic | 25.0% |
| AAATATGAGTTAGAAAAGGG+AGG | + | chr7_1:50665751-50665770 | Msa1023300:CDS | 30.0% | |
| AATATGAGTTAGAAAAGGGA+GGG | + | chr7_1:50665752-50665771 | Msa1023300:CDS | 30.0% | |
| !! | CAATATTGGATTTTGTTTCC+AGG | - | chr7_1:50665893-50665912 | None:intergenic | 30.0% |
| TACCTTATCATCTATGAACT+TGG | - | chr7_1:50665956-50665975 | None:intergenic | 30.0% | |
| AAATACCACAAACTTCACTA+AGG | + | chr7_1:50666309-50666328 | Msa1023300:intron | 30.0% | |
| AATACCACAAACTTCACTAA+GGG | + | chr7_1:50666310-50666329 | Msa1023300:intron | 30.0% | |
| AATTCTTGAGAATGAGCTTA+AGG | + | chr7_1:50666965-50666984 | Msa1023300:CDS | 30.0% | |
| GAGCTTAAGGATAATTTCTT+TGG | + | chr7_1:50666978-50666997 | Msa1023300:CDS | 30.0% | |
| CTTAAGGATAATTTCTTTGG+TGG | + | chr7_1:50666981-50667000 | Msa1023300:CDS | 30.0% | |
| ! | TTTGTTGCTTCTTGTACAAT+GGG | - | chr7_1:50667059-50667078 | None:intergenic | 30.0% |
| AATTTCCCAAGCTTTACAAA+TGG | + | chr7_1:50667102-50667121 | Msa1023300:CDS | 30.0% | |
| ATTTATCCTTAACAACTGGA+TGG | - | chr7_1:50667145-50667164 | None:intergenic | 30.0% | |
| AAATATGAGTTAGAAAAGGG+AGG | + | chr7_1:50665751-50665770 | Msa1023300:CDS | 30.0% | |
| AATATGAGTTAGAAAAGGGA+GGG | + | chr7_1:50665752-50665771 | Msa1023300:CDS | 30.0% | |
| !! | CAATATTGGATTTTGTTTCC+AGG | - | chr7_1:50665893-50665912 | None:intergenic | 30.0% |
| TACCTTATCATCTATGAACT+TGG | - | chr7_1:50665956-50665975 | None:intergenic | 30.0% | |
| AAATACCACAAACTTCACTA+AGG | + | chr7_1:50666309-50666328 | Msa1023300:intron | 30.0% | |
| AATACCACAAACTTCACTAA+GGG | + | chr7_1:50666310-50666329 | Msa1023300:intron | 30.0% | |
| AATTCTTGAGAATGAGCTTA+AGG | + | chr7_1:50666965-50666984 | Msa1023300:CDS | 30.0% | |
| GAGCTTAAGGATAATTTCTT+TGG | + | chr7_1:50666978-50666997 | Msa1023300:CDS | 30.0% | |
| CTTAAGGATAATTTCTTTGG+TGG | + | chr7_1:50666981-50667000 | Msa1023300:CDS | 30.0% | |
| ! | TTTGTTGCTTCTTGTACAAT+GGG | - | chr7_1:50667059-50667078 | None:intergenic | 30.0% |
| AATTTCCCAAGCTTTACAAA+TGG | + | chr7_1:50667102-50667121 | Msa1023300:CDS | 30.0% | |
| ATTTATCCTTAACAACTGGA+TGG | - | chr7_1:50667145-50667164 | None:intergenic | 30.0% | |
| ! | CAGGAAAATGTGAAGCTTTT+TGG | + | chr7_1:50665664-50665683 | Msa1023300:CDS | 35.0% |
| !!! | TGTGAAGCTTTTTGGAATGA+TGG | + | chr7_1:50665672-50665691 | Msa1023300:CDS | 35.0% |
| GAGATTGCTCTAACATTGAA+GGG | + | chr7_1:50665718-50665737 | Msa1023300:CDS | 35.0% | |
| ATACAACCCTGTTTACAAGA+AGG | + | chr7_1:50665798-50665817 | Msa1023300:CDS | 35.0% | |
| ATCACAAGGGATTCTGATAT+AGG | - | chr7_1:50665850-50665869 | None:intergenic | 35.0% | |
| GACATACTCAAGAATCACAA+GGG | - | chr7_1:50665863-50665882 | None:intergenic | 35.0% | |
| TAAGGATCAGAAGGCAATAT+TGG | - | chr7_1:50665907-50665926 | None:intergenic | 35.0% | |
| GACCAAGTTCATAGATGATA+AGG | + | chr7_1:50665951-50665970 | Msa1023300:intron | 35.0% | |
| GAATTACGTTCATGTGATCT+CGG | - | chr7_1:50666137-50666156 | None:intergenic | 35.0% | |
| ATATTTCACAAGCATGTGGA+TGG | + | chr7_1:50666190-50666209 | Msa1023300:intron | 35.0% | |
| ATACGCTAGAGAGACATTTA+GGG | - | chr7_1:50666573-50666592 | None:intergenic | 35.0% | |
| TATACGCTAGAGAGACATTT+AGG | - | chr7_1:50666574-50666593 | None:intergenic | 35.0% | |
| !! | TATAATGACTTGTGACGGAT+TGG | - | chr7_1:50666692-50666711 | None:intergenic | 35.0% |
| ! | TTGTTGCTTCTTGTACAATG+GGG | - | chr7_1:50667058-50667077 | None:intergenic | 35.0% |
| ! | GTTTGTTGCTTCTTGTACAA+TGG | - | chr7_1:50667060-50667079 | None:intergenic | 35.0% |
| TGACTCCATTTGTAAAGCTT+GGG | - | chr7_1:50667110-50667129 | None:intergenic | 35.0% | |
| TTGACTCCATTTGTAAAGCT+TGG | - | chr7_1:50667111-50667130 | None:intergenic | 35.0% | |
| GGCAATTTATCCTTAACAAC+TGG | - | chr7_1:50667149-50667168 | None:intergenic | 35.0% | |
| ! | CAGGAAAATGTGAAGCTTTT+TGG | + | chr7_1:50665664-50665683 | Msa1023300:CDS | 35.0% |
| !!! | TGTGAAGCTTTTTGGAATGA+TGG | + | chr7_1:50665672-50665691 | Msa1023300:CDS | 35.0% |
| GAGATTGCTCTAACATTGAA+GGG | + | chr7_1:50665718-50665737 | Msa1023300:CDS | 35.0% | |
| ATACAACCCTGTTTACAAGA+AGG | + | chr7_1:50665798-50665817 | Msa1023300:CDS | 35.0% | |
| ATCACAAGGGATTCTGATAT+AGG | - | chr7_1:50665850-50665869 | None:intergenic | 35.0% | |
| GACATACTCAAGAATCACAA+GGG | - | chr7_1:50665863-50665882 | None:intergenic | 35.0% | |
| TAAGGATCAGAAGGCAATAT+TGG | - | chr7_1:50665907-50665926 | None:intergenic | 35.0% | |
| GACCAAGTTCATAGATGATA+AGG | + | chr7_1:50665951-50665970 | Msa1023300:intron | 35.0% | |
| GAATTACGTTCATGTGATCT+CGG | - | chr7_1:50666137-50666156 | None:intergenic | 35.0% | |
| ATATTTCACAAGCATGTGGA+TGG | + | chr7_1:50666190-50666209 | Msa1023300:intron | 35.0% | |
| ATACGCTAGAGAGACATTTA+GGG | - | chr7_1:50666573-50666592 | None:intergenic | 35.0% | |
| TATACGCTAGAGAGACATTT+AGG | - | chr7_1:50666574-50666593 | None:intergenic | 35.0% | |
| !! | TATAATGACTTGTGACGGAT+TGG | - | chr7_1:50666692-50666711 | None:intergenic | 35.0% |
| ! | TTGTTGCTTCTTGTACAATG+GGG | - | chr7_1:50667058-50667077 | None:intergenic | 35.0% |
| ! | GTTTGTTGCTTCTTGTACAA+TGG | - | chr7_1:50667060-50667079 | None:intergenic | 35.0% |
| TGACTCCATTTGTAAAGCTT+GGG | - | chr7_1:50667110-50667129 | None:intergenic | 35.0% | |
| TTGACTCCATTTGTAAAGCT+TGG | - | chr7_1:50667111-50667130 | None:intergenic | 35.0% | |
| GGCAATTTATCCTTAACAAC+TGG | - | chr7_1:50667149-50667168 | None:intergenic | 35.0% | |
| GGAGATTGCTCTAACATTGA+AGG | + | chr7_1:50665717-50665736 | Msa1023300:CDS | 40.0% | |
| CAGGAACCTTCTTGTAAACA+GGG | - | chr7_1:50665807-50665826 | None:intergenic | 40.0% | |
| ACAGGAACCTTCTTGTAAAC+AGG | - | chr7_1:50665808-50665827 | None:intergenic | 40.0% | |
| CGACATACTCAAGAATCACA+AGG | - | chr7_1:50665864-50665883 | None:intergenic | 40.0% | |
| ! | GCTCTTTTGTAAGGATCAGA+AGG | - | chr7_1:50665916-50665935 | None:intergenic | 40.0% |
| TGATCCTTACAAAAGAGCCT+TGG | + | chr7_1:50665918-50665937 | Msa1023300:intron | 40.0% | |
| ! | TCTTTATTTGTGCGCATGTG+TGG | + | chr7_1:50666162-50666181 | Msa1023300:intron | 40.0% |
| ! | AACTTCACTAAGGGTGTGTT+TGG | + | chr7_1:50666319-50666338 | Msa1023300:intron | 40.0% |
| TGTGTTTGGATGGAAGGTTT+AGG | + | chr7_1:50666333-50666352 | Msa1023300:intron | 40.0% | |
| ! | ATTTGAAGCGGTTCTCAATG+TGG | - | chr7_1:50666598-50666617 | None:intergenic | 40.0% |
| AGAACGTGAGAAAGCTATTG+AGG | + | chr7_1:50666923-50666942 | Msa1023300:CDS | 40.0% | |
| GGATAATTTCTTTGGTGGAG+AGG | + | chr7_1:50666986-50667005 | Msa1023300:CDS | 40.0% | |
| ! | CTGCAGTCTTCATAGCTTTT+TGG | + | chr7_1:50667030-50667049 | Msa1023300:CDS | 40.0% |
| ATCCTTAACAACTGGATGGT+TGG | - | chr7_1:50667141-50667160 | None:intergenic | 40.0% | |
| GATAAATTGCCTCCTAGAGA+AGG | + | chr7_1:50667158-50667177 | Msa1023300:CDS | 40.0% | |
| TAAGCCAAAAGTCCTTCTCT+AGG | - | chr7_1:50667173-50667192 | None:intergenic | 40.0% | |
| GGAGATTGCTCTAACATTGA+AGG | + | chr7_1:50665717-50665736 | Msa1023300:CDS | 40.0% | |
| CAGGAACCTTCTTGTAAACA+GGG | - | chr7_1:50665807-50665826 | None:intergenic | 40.0% | |
| ACAGGAACCTTCTTGTAAAC+AGG | - | chr7_1:50665808-50665827 | None:intergenic | 40.0% | |
| CGACATACTCAAGAATCACA+AGG | - | chr7_1:50665864-50665883 | None:intergenic | 40.0% | |
| ! | GCTCTTTTGTAAGGATCAGA+AGG | - | chr7_1:50665916-50665935 | None:intergenic | 40.0% |
| TGATCCTTACAAAAGAGCCT+TGG | + | chr7_1:50665918-50665937 | Msa1023300:intron | 40.0% | |
| ! | TCTTTATTTGTGCGCATGTG+TGG | + | chr7_1:50666162-50666181 | Msa1023300:intron | 40.0% |
| ! | AACTTCACTAAGGGTGTGTT+TGG | + | chr7_1:50666319-50666338 | Msa1023300:intron | 40.0% |
| TGTGTTTGGATGGAAGGTTT+AGG | + | chr7_1:50666333-50666352 | Msa1023300:intron | 40.0% | |
| ! | ATTTGAAGCGGTTCTCAATG+TGG | - | chr7_1:50666598-50666617 | None:intergenic | 40.0% |
| AGAACGTGAGAAAGCTATTG+AGG | + | chr7_1:50666923-50666942 | Msa1023300:CDS | 40.0% | |
| GGATAATTTCTTTGGTGGAG+AGG | + | chr7_1:50666986-50667005 | Msa1023300:CDS | 40.0% | |
| ! | CTGCAGTCTTCATAGCTTTT+TGG | + | chr7_1:50667030-50667049 | Msa1023300:CDS | 40.0% |
| ATCCTTAACAACTGGATGGT+TGG | - | chr7_1:50667141-50667160 | None:intergenic | 40.0% | |
| GATAAATTGCCTCCTAGAGA+AGG | + | chr7_1:50667158-50667177 | Msa1023300:CDS | 40.0% | |
| TAAGCCAAAAGTCCTTCTCT+AGG | - | chr7_1:50667173-50667192 | None:intergenic | 40.0% | |
| TTGAGTATGTCGATGAGACC+TGG | + | chr7_1:50665872-50665891 | Msa1023300:intron | 45.0% | |
| AGAGATCGGAGTTCGAACTT+CGG | - | chr7_1:50666082-50666101 | None:intergenic | 45.0% | |
| ! | TGATCTCGGTTCAGTTGGTA+GGG | - | chr7_1:50666123-50666142 | None:intergenic | 45.0% |
| TCATGTGATCTCGGTTCAGT+TGG | - | chr7_1:50666128-50666147 | None:intergenic | 45.0% | |
| CACACCCTTAGTGAAGTTTG+TGG | - | chr7_1:50666317-50666336 | None:intergenic | 45.0% | |
| ! | TCACTAAGGGTGTGTTTGGA+TGG | + | chr7_1:50666323-50666342 | Msa1023300:intron | 45.0% |
| ! | TAAGGGTGTGTTTGGATGGA+AGG | + | chr7_1:50666327-50666346 | Msa1023300:intron | 45.0% |
| TTGGATGGAAGGTTTAGGAG+TGG | + | chr7_1:50666338-50666357 | Msa1023300:intron | 45.0% | |
| ATGGAAGGTTTAGGAGTGGA+AGG | + | chr7_1:50666342-50666361 | Msa1023300:intron | 45.0% | |
| TGGAAGGTTTAGGAGTGGAA+GGG | + | chr7_1:50666343-50666362 | Msa1023300:intron | 45.0% | |
| TTGGATTGAGGGTTTAGGAG+GGG | - | chr7_1:50666545-50666564 | None:intergenic | 45.0% | |
| CTTGGATTGAGGGTTTAGGA+GGG | - | chr7_1:50666546-50666565 | None:intergenic | 45.0% | |
| TGTGCTTGGATTGAGGGTTT+AGG | - | chr7_1:50666550-50666569 | None:intergenic | 45.0% | |
| TTAGGGTGTGCTTGGATTGA+GGG | - | chr7_1:50666556-50666575 | None:intergenic | 45.0% | |
| ! | TTTAGGGTGTGCTTGGATTG+AGG | - | chr7_1:50666557-50666576 | None:intergenic | 45.0% |
| ! | AGAGACATTTAGGGTGTGCT+TGG | - | chr7_1:50666564-50666583 | None:intergenic | 45.0% |
| ! | ACCAGTGTTTAAGTGCTGCA+CGG | + | chr7_1:50666874-50666893 | Msa1023300:intron | 45.0% |
| TTCTTTGGTGGAGAGGAGAT+TGG | + | chr7_1:50666993-50667012 | Msa1023300:CDS | 45.0% | |
| CACCAACCATCCAGTTGTTA+AGG | + | chr7_1:50667136-50667155 | Msa1023300:CDS | 45.0% | |
| TTGAGTATGTCGATGAGACC+TGG | + | chr7_1:50665872-50665891 | Msa1023300:intron | 45.0% | |
| AGAGATCGGAGTTCGAACTT+CGG | - | chr7_1:50666082-50666101 | None:intergenic | 45.0% | |
| ! | TGATCTCGGTTCAGTTGGTA+GGG | - | chr7_1:50666123-50666142 | None:intergenic | 45.0% |
| TCATGTGATCTCGGTTCAGT+TGG | - | chr7_1:50666128-50666147 | None:intergenic | 45.0% | |
| CACACCCTTAGTGAAGTTTG+TGG | - | chr7_1:50666317-50666336 | None:intergenic | 45.0% | |
| ! | TCACTAAGGGTGTGTTTGGA+TGG | + | chr7_1:50666323-50666342 | Msa1023300:intron | 45.0% |
| ! | TAAGGGTGTGTTTGGATGGA+AGG | + | chr7_1:50666327-50666346 | Msa1023300:intron | 45.0% |
| TTGGATGGAAGGTTTAGGAG+TGG | + | chr7_1:50666338-50666357 | Msa1023300:intron | 45.0% | |
| ATGGAAGGTTTAGGAGTGGA+AGG | + | chr7_1:50666342-50666361 | Msa1023300:intron | 45.0% | |
| TGGAAGGTTTAGGAGTGGAA+GGG | + | chr7_1:50666343-50666362 | Msa1023300:intron | 45.0% | |
| TTGGATTGAGGGTTTAGGAG+GGG | - | chr7_1:50666545-50666564 | None:intergenic | 45.0% | |
| CTTGGATTGAGGGTTTAGGA+GGG | - | chr7_1:50666546-50666565 | None:intergenic | 45.0% | |
| TGTGCTTGGATTGAGGGTTT+AGG | - | chr7_1:50666550-50666569 | None:intergenic | 45.0% | |
| TTAGGGTGTGCTTGGATTGA+GGG | - | chr7_1:50666556-50666575 | None:intergenic | 45.0% | |
| ! | TTTAGGGTGTGCTTGGATTG+AGG | - | chr7_1:50666557-50666576 | None:intergenic | 45.0% |
| ! | AGAGACATTTAGGGTGTGCT+TGG | - | chr7_1:50666564-50666583 | None:intergenic | 45.0% |
| ! | ACCAGTGTTTAAGTGCTGCA+CGG | + | chr7_1:50666874-50666893 | Msa1023300:intron | 45.0% |
| TTCTTTGGTGGAGAGGAGAT+TGG | + | chr7_1:50666993-50667012 | Msa1023300:CDS | 45.0% | |
| CACCAACCATCCAGTTGTTA+AGG | + | chr7_1:50667136-50667155 | Msa1023300:CDS | 45.0% | |
| TGGCAAGTCCATTTGTGAGC+AGG | + | chr7_1:50665692-50665711 | Msa1023300:CDS | 50.0% | |
| GGCAAGTCCATTTGTGAGCA+GGG | + | chr7_1:50665693-50665712 | Msa1023300:CDS | 50.0% | |
| AAGTCCATTTGTGAGCAGGG+TGG | + | chr7_1:50665696-50665715 | Msa1023300:CDS | 50.0% | |
| ATCTCCACCCTGCTCACAAA+TGG | - | chr7_1:50665703-50665722 | None:intergenic | 50.0% | |
| ! | CGAGCCAAGGCTCTTTTGTA+AGG | - | chr7_1:50665925-50665944 | None:intergenic | 50.0% |
| ! | AAAGAGCCTTGGCTCGTTTC+TGG | + | chr7_1:50665929-50665948 | Msa1023300:intron | 50.0% |
| GTGATCTCGGTTCAGTTGGT+AGG | - | chr7_1:50666124-50666143 | None:intergenic | 50.0% | |
| TTAGGAGTGGAAGGGAGATG+AGG | + | chr7_1:50666351-50666370 | Msa1023300:intron | 50.0% | |
| TAGGAGTGGAAGGGAGATGA+GGG | + | chr7_1:50666352-50666371 | Msa1023300:intron | 50.0% | |
| GCTTGGATTGAGGGTTTAGG+AGG | - | chr7_1:50666547-50666566 | None:intergenic | 50.0% | |
| TCCGTGCAGCACTTAAACAC+TGG | - | chr7_1:50666878-50666897 | None:intergenic | 50.0% | |
| ! | GCCTCCTAGAGAAGGACTTT+TGG | + | chr7_1:50667166-50667185 | Msa1023300:CDS | 50.0% |
| GCCAAAAGTCCTTCTCTAGG+AGG | - | chr7_1:50667170-50667189 | None:intergenic | 50.0% | |
| TGGCAAGTCCATTTGTGAGC+AGG | + | chr7_1:50665692-50665711 | Msa1023300:CDS | 50.0% | |
| GGCAAGTCCATTTGTGAGCA+GGG | + | chr7_1:50665693-50665712 | Msa1023300:CDS | 50.0% | |
| AAGTCCATTTGTGAGCAGGG+TGG | + | chr7_1:50665696-50665715 | Msa1023300:CDS | 50.0% | |
| ATCTCCACCCTGCTCACAAA+TGG | - | chr7_1:50665703-50665722 | None:intergenic | 50.0% | |
| ! | CGAGCCAAGGCTCTTTTGTA+AGG | - | chr7_1:50665925-50665944 | None:intergenic | 50.0% |
| ! | AAAGAGCCTTGGCTCGTTTC+TGG | + | chr7_1:50665929-50665948 | Msa1023300:intron | 50.0% |
| GTGATCTCGGTTCAGTTGGT+AGG | - | chr7_1:50666124-50666143 | None:intergenic | 50.0% | |
| TTAGGAGTGGAAGGGAGATG+AGG | + | chr7_1:50666351-50666370 | Msa1023300:intron | 50.0% | |
| TAGGAGTGGAAGGGAGATGA+GGG | + | chr7_1:50666352-50666371 | Msa1023300:intron | 50.0% | |
| GCTTGGATTGAGGGTTTAGG+AGG | - | chr7_1:50666547-50666566 | None:intergenic | 50.0% | |
| TCCGTGCAGCACTTAAACAC+TGG | - | chr7_1:50666878-50666897 | None:intergenic | 50.0% | |
| ! | GCCTCCTAGAGAAGGACTTT+TGG | + | chr7_1:50667166-50667185 | Msa1023300:CDS | 50.0% |
| GCCAAAAGTCCTTCTCTAGG+AGG | - | chr7_1:50667170-50667189 | None:intergenic | 50.0% | |
| CTTGGTCCAGAAACGAGCCA+AGG | - | chr7_1:50665938-50665957 | None:intergenic | 55.0% | |
| TTGAGGGTTTAGGAGGGGCA+GGG | - | chr7_1:50666540-50666559 | None:intergenic | 55.0% | |
| ATTGAGGGTTTAGGAGGGGC+AGG | - | chr7_1:50666541-50666560 | None:intergenic | 55.0% | |
| CTTGGTCCAGAAACGAGCCA+AGG | - | chr7_1:50665938-50665957 | None:intergenic | 55.0% | |
| TTGAGGGTTTAGGAGGGGCA+GGG | - | chr7_1:50666540-50666559 | None:intergenic | 55.0% | |
| ATTGAGGGTTTAGGAGGGGC+AGG | - | chr7_1:50666541-50666560 | None:intergenic | 55.0% | |
| TAGGAGGGGCAGGGAGAGGA+GGG | - | chr7_1:50666531-50666550 | None:intergenic | 65.0% | |
| TTAGGAGGGGCAGGGAGAGG+AGG | - | chr7_1:50666532-50666551 | None:intergenic | 65.0% | |
| GGTTTAGGAGGGGCAGGGAG+AGG | - | chr7_1:50666535-50666554 | None:intergenic | 65.0% | |
| TAGGAGGGGCAGGGAGAGGA+GGG | - | chr7_1:50666531-50666550 | None:intergenic | 65.0% | |
| TTAGGAGGGGCAGGGAGAGG+AGG | - | chr7_1:50666532-50666551 | None:intergenic | 65.0% | |
| GGTTTAGGAGGGGCAGGGAG+AGG | - | chr7_1:50666535-50666554 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 50665652 | 50667232 | 50665652 | ID=Msa1023300;Name=Msa1023300 |
| chr7_1 | mRNA | 50665652 | 50667232 | 50665652 | ID=Msa1023300-mRNA-1;Parent=Msa1023300;Name=Msa1023300-mRNA-1;_AED=0.41;_eAED=0.41;_QI=0|0|0|1|1|1|2|0|189 |
| chr7_1 | exon | 50665652 | 50665875 | 50665652 | ID=Msa1023300-mRNA-1:exon:9946;Parent=Msa1023300-mRNA-1 |
| chr7_1 | exon | 50666887 | 50667232 | 50666887 | ID=Msa1023300-mRNA-1:exon:9947;Parent=Msa1023300-mRNA-1 |
| chr7_1 | CDS | 50665652 | 50665875 | 50665652 | ID=Msa1023300-mRNA-1:cds;Parent=Msa1023300-mRNA-1 |
| chr7_1 | CDS | 50666887 | 50667232 | 50666887 | ID=Msa1023300-mRNA-1:cds;Parent=Msa1023300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
