Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0142280 | G7ZZT9 | 74.091 | 220 | 27 | 5 | 1 | 193 | 7 | 223 | 3.02e-97 | 294 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003630 | Msa0142280 | 0.815626 | 8.397185e-52 | -8.615850e-47 |
| Msa0015090 | Msa0142280 | 0.825779 | 3.891650e-54 | -8.615850e-47 |
| Msa0017320 | Msa0142280 | 0.855788 | 4.986840e-62 | -8.615850e-47 |
| Msa0037880 | Msa0142280 | 0.800491 | 1.405723e-48 | -8.615850e-47 |
| Msa0041240 | Msa0142280 | 0.801574 | 8.445626e-49 | -8.615850e-47 |
| Msa0042550 | Msa0142280 | 0.806761 | 7.029615e-50 | -8.615850e-47 |
| Msa0049750 | Msa0142280 | 0.827935 | 1.188502e-54 | -8.615850e-47 |
| Msa0052030 | Msa0142280 | 0.807696 | 4.454676e-50 | -8.615850e-47 |
| Msa0055070 | Msa0142280 | 0.810288 | 1.241752e-50 | -8.615850e-47 |
| Msa0058310 | Msa0142280 | 0.813282 | 2.769627e-51 | -8.615850e-47 |
| Msa0064300 | Msa0142280 | 0.817368 | 3.419144e-52 | -8.615850e-47 |
| Msa0065650 | Msa0142280 | 0.822445 | 2.360270e-53 | -8.615850e-47 |
| Msa0085720 | Msa0142280 | 0.813888 | 2.037279e-51 | -8.615850e-47 |
| Msa0086420 | Msa0142280 | 0.805190 | 1.504243e-49 | -8.615850e-47 |
| Msa0090970 | Msa0142280 | 0.818838 | 1.590389e-52 | -8.615850e-47 |
| Msa0101020 | Msa0142280 | 0.815583 | 8.580840e-52 | -8.615850e-47 |
| Msa0103860 | Msa0142280 | 0.816034 | 6.809493e-52 | -8.615850e-47 |
| Msa0111080 | Msa0142280 | 0.849100 | 4.015289e-60 | -8.615850e-47 |
| Msa0124550 | Msa0142280 | 0.815980 | 7.001654e-52 | -8.615850e-47 |
| Msa0130520 | Msa0142280 | 0.809384 | 1.943424e-50 | -8.615850e-47 |
| Msa0135410 | Msa0142280 | 0.842686 | 2.222234e-58 | -8.615850e-47 |
| Msa0138020 | Msa0142280 | 0.839636 | 1.407285e-57 | -8.615850e-47 |
| Msa0138640 | Msa0142280 | 0.804837 | 1.782955e-49 | -8.615850e-47 |
| Msa0142280 | Msa0142500 | 0.818673 | 1.733833e-52 | -8.615850e-47 |
| Msa0142280 | Msa0145110 | 0.811887 | 5.590148e-51 | -8.615850e-47 |
| Msa0142280 | Msa0152560 | 0.821724 | 3.467880e-53 | -8.615850e-47 |
| Msa0142280 | Msa0154920 | 0.839630 | 1.412842e-57 | -8.615850e-47 |
| Msa0142280 | Msa0155340 | 0.835910 | 1.274392e-56 | -8.615850e-47 |
| Msa0142280 | Msa0171980 | 0.800462 | 1.424758e-48 | -8.615850e-47 |
| Msa0142280 | Msa0172000 | 0.805094 | 1.575941e-49 | -8.615850e-47 |
| Msa0142280 | Msa0174260 | 0.807120 | 5.902005e-50 | -8.615850e-47 |
| Msa0142280 | Msa0174390 | 0.800053 | 1.726017e-48 | -8.615850e-47 |
| Msa0142280 | Msa0175050 | 0.832830 | 7.555299e-56 | -8.615850e-47 |
| Msa0142280 | Msa0178510 | 0.824370 | 8.374869e-54 | -8.615850e-47 |
| Msa0142280 | Msa0186950 | 0.805021 | 1.632477e-49 | -8.615850e-47 |
| Msa0142280 | Msa0187060 | 0.800357 | 1.496885e-48 | -8.615850e-47 |
| Msa0142280 | Msa0187490 | 0.824372 | 8.365914e-54 | -8.615850e-47 |
| Msa0142280 | Msa0187830 | 0.826329 | 2.879741e-54 | -8.615850e-47 |
| Msa0142280 | Msa0189030 | 0.801018 | 1.097474e-48 | -8.615850e-47 |
| Msa0142280 | Msa0189610 | 0.834948 | 2.230984e-56 | -8.615850e-47 |
| Msa0142280 | Msa0190530 | 0.811149 | 8.088372e-51 | -8.615850e-47 |
| Msa0142280 | Msa0194010 | 0.809131 | 2.201654e-50 | -8.615850e-47 |
| Msa0142280 | Msa0197610 | 0.825593 | 4.306704e-54 | -8.615850e-47 |
| Msa0142280 | Msa0200850 | 0.829584 | 4.743288e-55 | -8.615850e-47 |
| Msa0142280 | Msa0201530 | 0.815632 | 8.369113e-52 | -8.615850e-47 |
| Msa0142280 | Msa0202930 | 0.821936 | 3.097994e-53 | -8.615850e-47 |
| Msa0142280 | Msa0206010 | 0.811033 | 8.569961e-51 | -8.615850e-47 |
| Msa0142280 | Msa0217030 | 0.801381 | 9.250542e-49 | -8.615850e-47 |
| Msa0142280 | Msa0222980 | 0.814966 | 1.176757e-51 | -8.615850e-47 |
| Msa0142280 | Msa0225470 | 0.818823 | 1.603127e-52 | -8.615850e-47 |
| Msa0142280 | Msa0231240 | 0.802487 | 5.481575e-49 | -8.615850e-47 |
| Msa0142280 | Msa0235880 | 0.811533 | 6.674948e-51 | -8.615850e-47 |
| Msa0142280 | Msa0240270 | 0.820477 | 6.717783e-53 | -8.615850e-47 |
| Msa0142280 | Msa0243480 | 0.830824 | 2.362336e-55 | -8.615850e-47 |
| Msa0142280 | Msa0244140 | 0.858448 | 8.181704e-63 | -8.615850e-47 |
| Msa0142280 | Msa0244180 | 0.801286 | 9.670906e-49 | -8.615850e-47 |
| Msa0142280 | Msa0244190 | 0.853889 | 1.772214e-61 | -8.615850e-47 |
| Msa0142280 | Msa0249100 | 0.805242 | 1.467033e-49 | -8.615850e-47 |
| Msa0142280 | Msa0262370 | 0.824840 | 6.488646e-54 | -8.615850e-47 |
| Msa0142280 | Msa0264310 | 0.803328 | 3.674029e-49 | -8.615850e-47 |
| Msa0142280 | Msa0271550 | 0.812374 | 4.377357e-51 | -8.615850e-47 |
| Msa0142280 | Msa0271580 | 0.815573 | 8.626157e-52 | -8.615850e-47 |
| Msa0142280 | Msa0271790 | 0.829645 | 4.585144e-55 | -8.615850e-47 |
| Msa0142280 | Msa0281930 | 0.832294 | 1.026186e-55 | -8.615850e-47 |
| Msa0142280 | Msa0282680 | 0.813363 | 2.658310e-51 | -8.615850e-47 |
| Msa0142280 | Msa0284450 | 0.824199 | 9.184185e-54 | -8.615850e-47 |
| Msa0142280 | Msa0299660 | 0.828335 | 9.519320e-55 | -8.615850e-47 |
| Msa0142280 | Msa0300150 | 0.820501 | 6.635106e-53 | -8.615850e-47 |
| Msa0142280 | Msa0303150 | 0.805296 | 1.429598e-49 | -8.615850e-47 |
| Msa0142280 | Msa0309270 | 0.812263 | 4.628495e-51 | -8.615850e-47 |
| Msa0142280 | Msa0310430 | 0.819830 | 9.453616e-53 | -8.615850e-47 |
| Msa0142280 | Msa0311470 | 0.824665 | 7.138407e-54 | -8.615850e-47 |
| Msa0142280 | Msa0319290 | 0.839611 | 1.428518e-57 | -8.615850e-47 |
| Msa0142280 | Msa0320430 | 0.809829 | 1.559513e-50 | -8.615850e-47 |
| Msa0142280 | Msa0321080 | 0.853051 | 3.084355e-61 | -8.615850e-47 |
| Msa0142280 | Msa0322680 | 0.820440 | 6.850809e-53 | -8.615850e-47 |
| Msa0142280 | Msa0326110 | 0.810992 | 8.746180e-51 | -8.615850e-47 |
| Msa0142280 | Msa0329430 | 0.848749 | 5.026266e-60 | -8.615850e-47 |
| Msa0142280 | Msa0340690 | 0.811071 | 8.408619e-51 | -8.615850e-47 |
| Msa0142280 | Msa0340710 | 0.804781 | 1.832037e-49 | -8.615850e-47 |
| Msa0142280 | Msa0347750 | 0.829238 | 5.756596e-55 | -8.615850e-47 |
| Msa0142280 | Msa0349700 | 0.804672 | 1.930153e-49 | -8.615850e-47 |
| Msa0142280 | Msa0365490 | 0.805795 | 1.123475e-49 | -8.615850e-47 |
| Msa0142280 | Msa0371950 | 0.811169 | 8.009275e-51 | -8.615850e-47 |
| Msa0142280 | Msa0394470 | 0.809466 | 1.865771e-50 | -8.615850e-47 |
| Msa0142280 | Msa0397250 | 0.802936 | 4.428493e-49 | -8.615850e-47 |
| Msa0142280 | Msa0403490 | 0.832992 | 6.887751e-56 | -8.615850e-47 |
| Msa0142280 | Msa0410580 | 0.808203 | 3.475459e-50 | -8.615850e-47 |
| Msa0142280 | Msa0422180 | 0.809047 | 2.295046e-50 | -8.615850e-47 |
| Msa0142280 | Msa0433530 | 0.807173 | 5.753489e-50 | -8.615850e-47 |
| Msa0142280 | Msa0455590 | 0.809107 | 2.227534e-50 | -8.615850e-47 |
| Msa0142280 | Msa0471900 | 0.809598 | 1.748152e-50 | -8.615850e-47 |
| Msa0142280 | Msa0477260 | 0.802859 | 4.592493e-49 | -8.615850e-47 |
| Msa0142280 | Msa0481280 | 0.804927 | 1.707602e-49 | -8.615850e-47 |
| Msa0142280 | Msa0482180 | 0.848076 | 7.717151e-60 | -8.615850e-47 |
| Msa0142280 | Msa0485490 | 0.842652 | 2.269263e-58 | -8.615850e-47 |
| Msa0142280 | Msa0496210 | 0.808612 | 2.843857e-50 | -8.615850e-47 |
| Msa0142280 | Msa0514610 | 0.804106 | 2.533158e-49 | -8.615850e-47 |
| Msa0142280 | Msa0518170 | 0.803610 | 3.211797e-49 | -8.615850e-47 |
| Msa0142280 | Msa0525610 | 0.825296 | 5.064423e-54 | -8.615850e-47 |
| Msa0142280 | Msa0526070 | -0.824450 | 8.021326e-54 | -8.615850e-47 |
| Msa0142280 | Msa0530290 | 0.807362 | 5.245274e-50 | -8.615850e-47 |
| Msa0142280 | Msa0530650 | 0.852668 | 3.968969e-61 | -8.615850e-47 |
| Msa0142280 | Msa0534410 | 0.837119 | 6.272915e-57 | -8.615850e-47 |
| Msa0142280 | Msa0537770 | 0.815228 | 1.029439e-51 | -8.615850e-47 |
| Msa0142280 | Msa0545290 | 0.829535 | 4.874586e-55 | -8.615850e-47 |
| Msa0142280 | Msa0549780 | 0.800921 | 1.148452e-48 | -8.615850e-47 |
| Msa0142280 | Msa0566350 | 0.838833 | 2.273152e-57 | -8.615850e-47 |
| Msa0142280 | Msa0566750 | 0.845555 | 3.774482e-59 | -8.615850e-47 |
| Msa0142280 | Msa0569780 | 0.820848 | 5.523172e-53 | -8.615850e-47 |
| Msa0142280 | Msa0587030 | 0.836469 | 9.187192e-57 | -8.615850e-47 |
| Msa0142280 | Msa0587190 | 0.867853 | 1.007605e-65 | -8.615850e-47 |
| Msa0142280 | Msa0590650 | 0.819880 | 9.207882e-53 | -8.615850e-47 |
| Msa0142280 | Msa0594200 | 0.818400 | 1.999324e-52 | -8.615850e-47 |
| Msa0142280 | Msa0597000 | 0.807428 | 5.078767e-50 | -8.615850e-47 |
| Msa0142280 | Msa0600890 | 0.833704 | 4.577779e-56 | -8.615850e-47 |
| Msa0142280 | Msa0615220 | 0.804486 | 2.110704e-49 | -8.615850e-47 |
| Msa0142280 | Msa0615340 | 0.852674 | 3.954842e-61 | -8.615850e-47 |
| Msa0142280 | Msa0615360 | 0.800089 | 1.697104e-48 | -8.615850e-47 |
| Msa0142280 | Msa0620960 | 0.800445 | 1.436359e-48 | -8.615850e-47 |
| Msa0142280 | Msa0621600 | 0.801900 | 7.239304e-49 | -8.615850e-47 |
| Msa0142280 | Msa0622170 | -0.808345 | 3.241186e-50 | -8.615850e-47 |
| Msa0142280 | Msa0626850 | 0.834550 | 2.808741e-56 | -8.615850e-47 |
| Msa0142280 | Msa0626990 | 0.845760 | 3.321424e-59 | -8.615850e-47 |
| Msa0142280 | Msa0627350 | 0.850579 | 1.550433e-60 | -8.615850e-47 |
| Msa0142280 | Msa0630950 | 0.813108 | 3.024861e-51 | -8.615850e-47 |
| Msa0142280 | Msa0641340 | 0.817036 | 4.061248e-52 | -8.615850e-47 |
| Msa0142280 | Msa0654620 | 0.823157 | 1.611093e-53 | -8.615850e-47 |
| Msa0142280 | Msa0657120 | 0.811867 | 5.646627e-51 | -8.615850e-47 |
| Msa0142280 | Msa0664970 | 0.833362 | 5.571683e-56 | -8.615850e-47 |
| Msa0142280 | Msa0665080 | 0.807560 | 4.763039e-50 | -8.615850e-47 |
| Msa0142280 | Msa0679550 | 0.881967 | 1.544809e-70 | -8.615850e-47 |
| Msa0142280 | Msa0679810 | 0.828464 | 8.862616e-55 | -8.615850e-47 |
| Msa0142280 | Msa0689780 | 0.819993 | 8.674718e-53 | -8.615850e-47 |
| Msa0142280 | Msa0692650 | 0.944764 | 1.070126e-103 | -8.615850e-47 |
| Msa0142280 | Msa0698440 | 0.829742 | 4.341604e-55 | -8.615850e-47 |
| Msa0142280 | Msa0701100 | 0.812418 | 4.283093e-51 | -8.615850e-47 |
| Msa0142280 | Msa0705990 | 0.821602 | 3.700374e-53 | -8.615850e-47 |
| Msa0142280 | Msa0715410 | 0.831538 | 1.577262e-55 | -8.615850e-47 |
| Msa0142280 | Msa0721340 | 0.824526 | 7.696262e-54 | -8.615850e-47 |
| Msa0142280 | Msa0731180 | 0.836451 | 9.284119e-57 | -8.615850e-47 |
| Msa0142280 | Msa0732600 | 0.806282 | 8.873473e-50 | -8.615850e-47 |
| Msa0142280 | Msa0742150 | 0.839455 | 1.568495e-57 | -8.615850e-47 |
| Msa0142280 | Msa0748730 | 0.817076 | 3.977768e-52 | -8.615850e-47 |
| Msa0142280 | Msa0750850 | 0.814640 | 1.390211e-51 | -8.615850e-47 |
| Msa0142280 | Msa0760350 | 0.807651 | 4.553866e-50 | -8.615850e-47 |
| Msa0142280 | Msa0763890 | 0.810357 | 1.200240e-50 | -8.615850e-47 |
| Msa0142280 | Msa0763920 | 0.811604 | 6.441674e-51 | -8.615850e-47 |
| Msa0142280 | Msa0767370 | 0.812101 | 5.022173e-51 | -8.615850e-47 |
| Msa0142280 | Msa0771580 | 0.840058 | 1.092894e-57 | -8.615850e-47 |
| Msa0142280 | Msa0773590 | 0.805152 | 1.532099e-49 | -8.615850e-47 |
| Msa0142280 | Msa0775560 | 0.833763 | 4.424261e-56 | -8.615850e-47 |
| Msa0142280 | Msa0786070 | 0.837615 | 4.681894e-57 | -8.615850e-47 |
| Msa0142280 | Msa0786780 | 0.817200 | 3.730187e-52 | -8.615850e-47 |
| Msa0142280 | Msa0789020 | 0.801231 | 9.927968e-49 | -8.615850e-47 |
| Msa0142280 | Msa0801730 | 0.816150 | 6.414018e-52 | -8.615850e-47 |
| Msa0142280 | Msa0805920 | 0.830013 | 3.728767e-55 | -8.615850e-47 |
| Msa0142280 | Msa0809140 | 0.819028 | 1.440284e-52 | -8.615850e-47 |
| Msa0142280 | Msa0811040 | 0.813595 | 2.364441e-51 | -8.615850e-47 |
| Msa0142280 | Msa0812950 | 0.853026 | 3.135596e-61 | -8.615850e-47 |
| Msa0142280 | Msa0823440 | 0.808181 | 3.513825e-50 | -8.615850e-47 |
| Msa0142280 | Msa0829830 | 0.804853 | 1.769219e-49 | -8.615850e-47 |
| Msa0142280 | Msa0842770 | 0.809287 | 2.039199e-50 | -8.615850e-47 |
| Msa0142280 | Msa0847470 | 0.826562 | 2.534173e-54 | -8.615850e-47 |
| Msa0142280 | Msa0847880 | 0.822930 | 1.820178e-53 | -8.615850e-47 |
| Msa0142280 | Msa0853440 | 0.801087 | 1.062474e-48 | -8.615850e-47 |
| Msa0142280 | Msa0861470 | 0.823450 | 1.375811e-53 | -8.615850e-47 |
| Msa0142280 | Msa0861570 | 0.819252 | 1.280654e-52 | -8.615850e-47 |
| Msa0142280 | Msa0862280 | 0.825554 | 4.400842e-54 | -8.615850e-47 |
| Msa0142280 | Msa0866400 | 0.802482 | 5.494111e-49 | -8.615850e-47 |
| Msa0142280 | Msa0870060 | 0.833306 | 5.753462e-56 | -8.615850e-47 |
| Msa0142280 | Msa0876360 | 0.816171 | 6.345234e-52 | -8.615850e-47 |
| Msa0142280 | Msa0877710 | 0.823415 | 1.402383e-53 | -8.615850e-47 |
| Msa0142280 | Msa0880810 | 0.803778 | 2.963769e-49 | -8.615850e-47 |
| Msa0142280 | Msa0901320 | 0.804580 | 2.018129e-49 | -8.615850e-47 |
| Msa0142280 | Msa0932100 | 0.803334 | 3.663495e-49 | -8.615850e-47 |
| Msa0142280 | Msa0935770 | 0.830720 | 2.505099e-55 | -8.615850e-47 |
| Msa0142280 | Msa0947760 | 0.823843 | 1.113498e-53 | -8.615850e-47 |
| Msa0142280 | Msa0970230 | 0.803573 | 3.267869e-49 | -8.615850e-47 |
| Msa0142280 | Msa0972810 | 0.809965 | 1.458001e-50 | -8.615850e-47 |
| Msa0142280 | Msa0973600 | 0.805137 | 1.543153e-49 | -8.615850e-47 |
| Msa0142280 | Msa0978700 | 0.817856 | 2.654462e-52 | -8.615850e-47 |
| Msa0142280 | Msa0981040 | 0.811879 | 5.612415e-51 | -8.615850e-47 |
| Msa0142280 | Msa0992600 | 0.808144 | 3.577855e-50 | -8.615850e-47 |
| Msa0142280 | Msa0998460 | 0.829801 | 4.201111e-55 | -8.615850e-47 |
| Msa0142280 | Msa1003990 | 0.800105 | 1.684829e-48 | -8.615850e-47 |
| Msa0142280 | Msa1018040 | 0.821795 | 3.339503e-53 | -8.615850e-47 |
| Msa0142280 | Msa1023300 | 0.814386 | 1.581704e-51 | -8.615850e-47 |
| Msa0142280 | Msa1026640 | 0.808557 | 2.920695e-50 | -8.615850e-47 |
| Msa0142280 | Msa1036910 | 0.804052 | 2.599486e-49 | -8.615850e-47 |
| Msa0142280 | Msa1039710 | -0.821260 | 4.437341e-53 | -8.615850e-47 |
| Msa0142280 | Msa1042660 | 0.802383 | 5.758784e-49 | -8.615850e-47 |
| Msa0142280 | Msa1062030 | 0.816514 | 5.317773e-52 | -8.615850e-47 |
| Msa0142280 | Msa1063420 | 0.816513 | 5.321159e-52 | -8.615850e-47 |
| Msa0142280 | Msa1071320 | 0.819911 | 9.056095e-53 | -8.615850e-47 |
| Msa0142280 | Msa1077070 | 0.818171 | 2.252795e-52 | -8.615850e-47 |
| Msa0142280 | Msa1077340 | 0.841791 | 3.835371e-58 | -8.615850e-47 |
| Msa0142280 | Msa1081790 | -0.805109 | 1.564582e-49 | -8.615850e-47 |
| Msa0142280 | Msa1087990 | 0.839157 | 1.874055e-57 | -8.615850e-47 |
| Msa0142280 | Msa1094280 | 0.808178 | 3.519190e-50 | -8.615850e-47 |
| Msa0142280 | Msa1107190 | 0.824039 | 1.001600e-53 | -8.615850e-47 |
| Msa0142280 | Msa1107260 | 0.805459 | 1.321449e-49 | -8.615850e-47 |
| Msa0142280 | Msa1109820 | 0.828107 | 1.080170e-54 | -8.615850e-47 |
| Msa0142280 | Msa1115280 | 0.853290 | 2.635361e-61 | -8.615850e-47 |
| Msa0142280 | Msa1122780 | 0.801194 | 1.010014e-48 | -8.615850e-47 |
| Msa0142280 | Msa1133570 | 0.809140 | 2.191669e-50 | -8.615850e-47 |
| Msa0142280 | Msa1143020 | 0.806705 | 7.223613e-50 | -8.615850e-47 |
| Msa0142280 | Msa1144040 | 0.803327 | 3.676250e-49 | -8.615850e-47 |
| Msa0142280 | Msa1150790 | 0.810147 | 1.331868e-50 | -8.615850e-47 |
| Msa0142280 | Msa1150810 | 0.817232 | 3.668693e-52 | -8.615850e-47 |
| Msa0142280 | Msa1164020 | 0.821097 | 4.838847e-53 | -8.615850e-47 |
| Msa0142280 | Msa1174310 | 0.834261 | 3.320499e-56 | -8.615850e-47 |
| Msa0142280 | Msa1177780 | 0.803211 | 3.884955e-49 | -8.615850e-47 |
| Msa0142280 | Msa1197070 | 0.802309 | 5.964568e-49 | -8.615850e-47 |
| Msa0142280 | Msa1202660 | 0.804439 | 2.159320e-49 | -8.615850e-47 |
| Msa0142280 | Msa1205390 | 0.817100 | 3.929298e-52 | -8.615850e-47 |
| Msa0142280 | Msa1207310 | 0.815096 | 1.101073e-51 | -8.615850e-47 |
| Msa0142280 | Msa1207350 | 0.825069 | 5.729587e-54 | -8.615850e-47 |
| Msa0142280 | Msa1208380 | 0.811000 | 8.711796e-51 | -8.615850e-47 |
| Msa0142280 | Msa1209190 | 0.828808 | 7.318980e-55 | -8.615850e-47 |
| Msa0142280 | Msa1209860 | 0.828702 | 7.761029e-55 | -8.615850e-47 |
| Msa0142280 | Msa1215920 | 0.818470 | 1.927811e-52 | -8.615850e-47 |
| Msa0142280 | Msa1218580 | 0.803051 | 4.191763e-49 | -8.615850e-47 |
| Msa0142280 | Msa1224200 | 0.972699 | 3.402365e-135 | -8.615850e-47 |
| Msa0142280 | Msa1229610 | 0.838400 | 2.940837e-57 | -8.615850e-47 |
| Msa0142280 | Msa1231180 | 0.804100 | 2.539947e-49 | -8.615850e-47 |
| Msa0142280 | Msa1235400 | 0.833464 | 5.252712e-56 | -8.615850e-47 |
| Msa0142280 | Msa1246700 | 0.816316 | 5.890192e-52 | -8.615850e-47 |
| Msa0142280 | Msa1250110 | 0.817675 | 2.916155e-52 | -8.615850e-47 |
| Msa0142280 | Msa1250730 | 0.820144 | 8.008364e-53 | -8.615850e-47 |
| Msa0142280 | Msa1258370 | 0.836806 | 7.539080e-57 | -8.615850e-47 |
| Msa0142280 | Msa1270660 | 0.860032 | 2.740746e-63 | -8.615850e-47 |
| Msa0142280 | Msa1270730 | 0.872932 | 2.173818e-67 | -8.615850e-47 |
| Msa0142280 | Msa1272320 | 0.835849 | 1.320234e-56 | -8.615850e-47 |
| Msa0142280 | Msa1276440 | 0.813521 | 2.453864e-51 | -8.615850e-47 |
| Msa0142280 | Msa1291450 | 0.805032 | 1.623840e-49 | -8.615850e-47 |
| Msa0142280 | Msa1292990 | 0.816760 | 4.682473e-52 | -8.615850e-47 |
| Msa0142280 | Msa1295330 | 0.837113 | 6.295034e-57 | -8.615850e-47 |
| Msa0142280 | Msa1295930 | 0.804391 | 2.208983e-49 | -8.615850e-47 |
| Msa0142280 | Msa1297310 | 0.814712 | 1.339827e-51 | -8.615850e-47 |
| Msa0142280 | Msa1304890 | -0.811502 | 6.781285e-51 | -8.615850e-47 |
| Msa0142280 | Msa1305350 | 0.806374 | 8.486750e-50 | -8.615850e-47 |
| Msa0142280 | Msa1306750 | 0.823816 | 1.129558e-53 | -8.615850e-47 |
| Msa0142280 | Msa1310220 | 0.825431 | 4.704303e-54 | -8.615850e-47 |
| Msa0142280 | Msa1314770 | 0.840896 | 6.597045e-58 | -8.615850e-47 |
| Msa0142280 | Msa1323290 | 0.815574 | 8.623107e-52 | -8.615850e-47 |
| Msa0142280 | Msa1328520 | 0.802178 | 6.347485e-49 | -8.615850e-47 |
| Msa0142280 | Msa1332050 | 0.812215 | 4.741592e-51 | -8.615850e-47 |
| Msa0142280 | Msa1333730 | 0.807044 | 6.126875e-50 | -8.615850e-47 |
| Msa0142280 | Msa1335230 | 0.860902 | 1.494183e-63 | -8.615850e-47 |
| Msa0142280 | Msa1338400 | 0.823271 | 1.514912e-53 | -8.615850e-47 |
| Msa0142280 | Msa1339190 | 0.822005 | 2.984914e-53 | -8.615850e-47 |
| Msa0142280 | Msa1341490 | 0.811456 | 6.939369e-51 | -8.615850e-47 |
| Msa0142280 | Msa1343250 | 0.826880 | 2.128313e-54 | -8.615850e-47 |
| Msa0142280 | Msa1344660 | 0.824547 | 7.608903e-54 | -8.615850e-47 |
| Msa0142280 | Msa1349450 | 0.802432 | 5.624873e-49 | -8.615850e-47 |
| Msa0142280 | Msa1355890 | 0.820682 | 6.028362e-53 | -8.615850e-47 |
| Msa0142280 | Msa1371240 | 0.804620 | 1.978955e-49 | -8.615850e-47 |
| Msa0142280 | Msa1372150 | 0.822355 | 2.476968e-53 | -8.615850e-47 |
| Msa0142280 | Msa1372290 | 0.826100 | 3.264743e-54 | -8.615850e-47 |
| Msa0142280 | Msa1378040 | 0.801271 | 9.740416e-49 | -8.615850e-47 |
| Msa0142280 | Msa1385020 | 0.809905 | 1.501628e-50 | -8.615850e-47 |
| Msa0142280 | Msa1394310 | 0.810220 | 1.284487e-50 | -8.615850e-47 |
| Msa0142280 | Msa1400070 | 0.808707 | 2.712904e-50 | -8.615850e-47 |
| Msa0142280 | Msa1400930 | 0.804805 | 1.811194e-49 | -8.615850e-47 |
| Msa0142280 | Msa1401460 | 0.803415 | 3.524814e-49 | -8.615850e-47 |
| Msa0142280 | Msa1407600 | 0.827196 | 1.787609e-54 | -8.615850e-47 |
| Msa0142280 | Msa1412070 | 0.811141 | 8.119271e-51 | -8.615850e-47 |
| Msa0142280 | Msa1418920 | 0.806412 | 8.329050e-50 | -8.615850e-47 |
| Msa0142280 | Msa1420270 | 0.828145 | 1.057835e-54 | -8.615850e-47 |
| Msa0142280 | Msa1423820 | 0.849876 | 2.440839e-60 | -8.615850e-47 |
| Msa0142280 | Msa1424630 | 0.804590 | 2.007947e-49 | -8.615850e-47 |
| Msa0142280 | Msa1427230 | 0.802214 | 6.238169e-49 | -8.615850e-47 |
| Msa0142280 | Msa1428780 | 0.814785 | 1.290646e-51 | -8.615850e-47 |
| Msa0142280 | Msa1430130 | 0.841648 | 4.183234e-58 | -8.615850e-47 |
| Msa0142280 | Msa1432630 | 0.809045 | 2.297026e-50 | -8.615850e-47 |
| Msa0142280 | Msa1436600 | 0.805005 | 1.644740e-49 | -8.615850e-47 |
| Msa0142280 | Msa1438840 | 0.818553 | 1.846143e-52 | -8.615850e-47 |
| Msa0142280 | Msa1442790 | 0.841994 | 3.390474e-58 | -8.615850e-47 |
| Msa0142280 | Msa1444260 | 0.833601 | 4.855338e-56 | -8.615850e-47 |
| Msa0142280 | Msa1445220 | 0.807782 | 4.272054e-50 | -8.615850e-47 |
| Msa0142280 | Msa1457160 | 0.827351 | 1.641088e-54 | -8.615850e-47 |
| Msa0142280 | Msa1460750 | 0.842921 | 1.924700e-58 | -8.615850e-47 |
| Msa0142280 | Msa1462360 | 0.810387 | 1.182319e-50 | -8.615850e-47 |
| Msa0142280 | Msa1463600 | 0.844566 | 6.983940e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0142280 | MtrunA17_Chr4g0076471 | 74.091 | 220 | 27 | 5 | 1 | 193 | 7 | 223 | 5.81e-101 | 294 |
| Msa0142280 | MtrunA17_Chr4g0076451 | 37.405 | 131 | 50 | 5 | 93 | 193 | 50 | 178 | 1.02e-14 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0142280 | AT5G47740.2 | 37.821 | 156 | 63 | 5 | 63 | 192 | 21 | 168 | 4.80e-22 | 90.1 |
| Msa0142280 | AT5G47740.1 | 37.662 | 154 | 64 | 5 | 63 | 192 | 21 | 166 | 1.04e-21 | 89.4 |
Find 40 sgRNAs with CRISPR-Local
Find 112 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGTGTTTGATTACAATTT+CGG | 0.312597 | 1_4:-1196892 | Msa0142280:CDS |
| GAAACTAAATATAAGGAAAT+TGG | 0.325459 | 1_4:-1195911 | Msa0142280:CDS |
| GAACTACCCAATCTAATCTA+AGG | 0.351629 | 1_4:-1195882 | None:intergenic |
| TTTGAAGAAGGAAAGTAGAT+TGG | 0.355768 | 1_4:-1196827 | Msa0142280:CDS |
| TTGTAGGGAAACTAAATATA+AGG | 0.364114 | 1_4:-1195918 | Msa0142280:CDS |
| TATGTTACCTTAGATTAGAT+TGG | 0.375634 | 1_4:+1195875 | None:intergenic |
| CAAGCATGGAAGCACTTTCA+TGG | 0.384069 | 1_4:-1196684 | Msa0142280:CDS |
| AATAAAACCACAACCACAAC+TGG | 0.394819 | 1_4:+1196930 | None:intergenic |
| TCTTGAATATCATGCTTAGT+TGG | 0.411358 | 1_4:+1196988 | None:intergenic |
| TTGGAATTAGTTTGACTTGA+GGG | 0.414606 | 1_4:+1196605 | None:intergenic |
| AGAGAAACAGTAGTTGTAGA+AGG | 0.431084 | 1_4:+1196640 | None:intergenic |
| AAAGCGTAACATACAGGTTA+AGG | 0.436501 | 1_4:-1195992 | Msa0142280:CDS |
| GAAATCTCCAGTTGTGGTTG+TGG | 0.445667 | 1_4:-1196937 | Msa0142280:CDS |
| GGTAGAAATGATGCTTATTG+AGG | 0.452714 | 1_4:-1195971 | Msa0142280:CDS |
| GAAGCCATTGTGGAACTTGT+AGG | 0.460657 | 1_4:-1195934 | Msa0142280:CDS |
| GTTTGAGATAAATTTGAAGA+AGG | 0.464932 | 1_4:-1196839 | Msa0142280:CDS |
| AATATAAGGAAATTGGTGAT+TGG | 0.465583 | 1_4:-1195904 | Msa0142280:CDS |
| ATGTTACCTTAGATTAGATT+GGG | 0.474526 | 1_4:+1195876 | None:intergenic |
| AGGTGTCACGGCATGTTTCA+AGG | 0.477649 | 1_4:+1196660 | None:intergenic |
| GTAGAAATGATGCTTATTGA+GGG | 0.483302 | 1_4:-1195970 | Msa0142280:CDS |
| TATAGATGATGTTGTTTATG+TGG | 0.505857 | 1_4:-1196731 | Msa0142280:CDS |
| TAATGAAAAGCGTAACATAC+AGG | 0.506176 | 1_4:-1195998 | Msa0142280:CDS |
| AATTTCGGAGACGACGATGA+TGG | 0.516786 | 1_4:-1196877 | Msa0142280:CDS |
| AAGGAGTAGTTACATGGAGT+TGG | 0.519333 | 1_4:+1196586 | None:intergenic |
| CGAAATTGTAATCAAACACT+TGG | 0.523720 | 1_4:+1196893 | None:intergenic |
| ATTGGATTCAATAAGAGAAG+AGG | 0.530259 | 1_4:-1196809 | Msa0142280:CDS |
| AAGCCATTGTGGAACTTGTA+GGG | 0.539241 | 1_4:-1195933 | Msa0142280:CDS |
| TATGTGGCAGTGGGAACAAA+TGG | 0.556548 | 1_4:-1196715 | Msa0142280:CDS |
| TGATGTTGTTTATGTGGCAG+TGG | 0.557388 | 1_4:-1196725 | Msa0142280:CDS |
| TAAGACAAGGAGTAGTTACA+TGG | 0.583206 | 1_4:+1196580 | None:intergenic |
| CAACGTTGCTGAAGCCATTG+TGG | 0.587024 | 1_4:-1195944 | Msa0142280:CDS |
| GTTGGAATTAGTTTGACTTG+AGG | 0.589120 | 1_4:+1196604 | None:intergenic |
| TGACTTGAGGGAAAACGTGT+AGG | 0.604542 | 1_4:+1196617 | None:intergenic |
| AAATGGTGGAAGTTCAAGCA+TGG | 0.604604 | 1_4:-1196698 | Msa0142280:CDS |
| TTTCCCTACAAGTTCCACAA+TGG | 0.638145 | 1_4:+1195930 | None:intergenic |
| GATGTTGTTTATGTGGCAGT+GGG | 0.642705 | 1_4:-1196724 | Msa0142280:CDS |
| AGTAGTTGTAGAAGGTGTCA+CGG | 0.650946 | 1_4:+1196648 | None:intergenic |
| ATTCAATAAGAGAAGAGGAG+TGG | 0.652515 | 1_4:-1196804 | Msa0142280:CDS |
| GTGGCAGTGGGAACAAATGG+TGG | 0.662195 | 1_4:-1196712 | Msa0142280:CDS |
| GATGATGAAATCTCCAGTTG+TGG | 0.697511 | 1_4:-1196943 | Msa0142280:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATTAGATAAAGTTAAATT+TGG | + | chr1_4:1196377-1196396 | None:intergenic | 15.0% |
| !!! | TGACAATAATATGTTTTTTT+TGG | - | chr1_4:1196558-1196577 | Msa0142280:intron | 15.0% |
| !!! | AAAACTTATTTTGAATGTTA+TGG | + | chr1_4:1196631-1196650 | None:intergenic | 15.0% |
| !! | CAATTAGATAAAGTTAAATT+TGG | + | chr1_4:1196377-1196396 | None:intergenic | 15.0% |
| !!! | TGACAATAATATGTTTTTTT+TGG | - | chr1_4:1196558-1196577 | Msa0142280:intron | 15.0% |
| !!! | AAAACTTATTTTGAATGTTA+TGG | + | chr1_4:1196631-1196650 | None:intergenic | 15.0% |
| !!! | TTTTGTTTGAAAATAAGACA+AGG | + | chr1_4:1196315-1196334 | None:intergenic | 20.0% |
| !!! | AATGTTATGGTTATGTTTTT+GGG | + | chr1_4:1196618-1196637 | None:intergenic | 20.0% |
| !! | TTTCATAATCTTAAACAACT+TGG | - | chr1_4:1196660-1196679 | Msa0142280:CDS | 20.0% |
| !! | AAACCTTATATATGTATTGA+TGG | - | chr1_4:1196833-1196852 | Msa0142280:CDS | 20.0% |
| !! | GAAACTAAATATAAGGAAAT+TGG | - | chr1_4:1196968-1196987 | Msa0142280:CDS | 20.0% |
| !!! | TTTTGTTTGAAAATAAGACA+AGG | + | chr1_4:1196315-1196334 | None:intergenic | 20.0% |
| !!! | AATGTTATGGTTATGTTTTT+GGG | + | chr1_4:1196618-1196637 | None:intergenic | 20.0% |
| !! | TTTCATAATCTTAAACAACT+TGG | - | chr1_4:1196660-1196679 | Msa0142280:CDS | 20.0% |
| !! | AAACCTTATATATGTATTGA+TGG | - | chr1_4:1196833-1196852 | Msa0142280:CDS | 20.0% |
| !! | GAAACTAAATATAAGGAAAT+TGG | - | chr1_4:1196968-1196987 | Msa0142280:CDS | 20.0% |
| ! | CAAGTGTTTGATTACAATTT+CGG | - | chr1_4:1195987-1196006 | Msa0142280:CDS | 25.0% |
| !! | GTTTGAGATAAATTTGAAGA+AGG | - | chr1_4:1196040-1196059 | Msa0142280:intron | 25.0% |
| !! | TATAGATGATGTTGTTTATG+TGG | - | chr1_4:1196148-1196167 | Msa0142280:intron | 25.0% |
| ! | TATGATGTGCAATTAATAAG+AGG | + | chr1_4:1196417-1196436 | None:intergenic | 25.0% |
| !! | AAAGATTTGATCACATCTTT+TGG | + | chr1_4:1196506-1196525 | None:intergenic | 25.0% |
| !! | GAATGTTATGGTTATGTTTT+TGG | + | chr1_4:1196619-1196638 | None:intergenic | 25.0% |
| ! | GAAGCTATATAGTATGATTT+AGG | + | chr1_4:1196704-1196723 | None:intergenic | 25.0% |
| ! | ACTCCATCAATACATATATA+AGG | + | chr1_4:1196839-1196858 | None:intergenic | 25.0% |
| ! | TTGTAGGGAAACTAAATATA+AGG | - | chr1_4:1196961-1196980 | Msa0142280:CDS | 25.0% |
| !! | AATATAAGGAAATTGGTGAT+TGG | - | chr1_4:1196975-1196994 | Msa0142280:CDS | 25.0% |
| ! | CAAGTGTTTGATTACAATTT+CGG | - | chr1_4:1195987-1196006 | Msa0142280:CDS | 25.0% |
| !! | GTTTGAGATAAATTTGAAGA+AGG | - | chr1_4:1196040-1196059 | Msa0142280:intron | 25.0% |
| !! | TATAGATGATGTTGTTTATG+TGG | - | chr1_4:1196148-1196167 | Msa0142280:intron | 25.0% |
| ! | TATGATGTGCAATTAATAAG+AGG | + | chr1_4:1196417-1196436 | None:intergenic | 25.0% |
| !! | AAAGATTTGATCACATCTTT+TGG | + | chr1_4:1196506-1196525 | None:intergenic | 25.0% |
| !! | GAATGTTATGGTTATGTTTT+TGG | + | chr1_4:1196619-1196638 | None:intergenic | 25.0% |
| ! | GAAGCTATATAGTATGATTT+AGG | + | chr1_4:1196704-1196723 | None:intergenic | 25.0% |
| ! | ACTCCATCAATACATATATA+AGG | + | chr1_4:1196839-1196858 | None:intergenic | 25.0% |
| ! | TTGTAGGGAAACTAAATATA+AGG | - | chr1_4:1196961-1196980 | Msa0142280:CDS | 25.0% |
| !! | AATATAAGGAAATTGGTGAT+TGG | - | chr1_4:1196975-1196994 | Msa0142280:CDS | 25.0% |
| TCTTGAATATCATGCTTAGT+TGG | + | chr1_4:1195894-1195913 | None:intergenic | 30.0% | |
| CGAAATTGTAATCAAACACT+TGG | + | chr1_4:1195989-1196008 | None:intergenic | 30.0% | |
| TTTGAAGAAGGAAAGTAGAT+TGG | - | chr1_4:1196052-1196071 | Msa0142280:intron | 30.0% | |
| ATTGGATTCAATAAGAGAAG+AGG | - | chr1_4:1196070-1196089 | Msa0142280:intron | 30.0% | |
| !! | TTGGAATTAGTTTGACTTGA+GGG | + | chr1_4:1196277-1196296 | None:intergenic | 30.0% |
| ! | TTGGTGATTTATGCTTATGT+TGG | + | chr1_4:1196358-1196377 | None:intergenic | 30.0% |
| CATGAATTATTACTACGAGA+AGG | - | chr1_4:1196723-1196742 | Msa0142280:CDS | 30.0% | |
| !! | GCTTCATGTATTATTTCTGA+AGG | + | chr1_4:1196774-1196793 | None:intergenic | 30.0% |
| ! | TAATGAAAAGCGTAACATAC+AGG | - | chr1_4:1196881-1196900 | Msa0142280:CDS | 30.0% |
| GTAGAAATGATGCTTATTGA+GGG | - | chr1_4:1196909-1196928 | Msa0142280:CDS | 30.0% | |
| TCTTGAATATCATGCTTAGT+TGG | + | chr1_4:1195894-1195913 | None:intergenic | 30.0% | |
| CGAAATTGTAATCAAACACT+TGG | + | chr1_4:1195989-1196008 | None:intergenic | 30.0% | |
| TTTGAAGAAGGAAAGTAGAT+TGG | - | chr1_4:1196052-1196071 | Msa0142280:intron | 30.0% | |
| ATTGGATTCAATAAGAGAAG+AGG | - | chr1_4:1196070-1196089 | Msa0142280:intron | 30.0% | |
| !! | TTGGAATTAGTTTGACTTGA+GGG | + | chr1_4:1196277-1196296 | None:intergenic | 30.0% |
| ! | TTGGTGATTTATGCTTATGT+TGG | + | chr1_4:1196358-1196377 | None:intergenic | 30.0% |
| CATGAATTATTACTACGAGA+AGG | - | chr1_4:1196723-1196742 | Msa0142280:CDS | 30.0% | |
| !! | GCTTCATGTATTATTTCTGA+AGG | + | chr1_4:1196774-1196793 | None:intergenic | 30.0% |
| ! | TAATGAAAAGCGTAACATAC+AGG | - | chr1_4:1196881-1196900 | Msa0142280:CDS | 30.0% |
| GTAGAAATGATGCTTATTGA+GGG | - | chr1_4:1196909-1196928 | Msa0142280:CDS | 30.0% | |
| AATAAAACCACAACCACAAC+TGG | + | chr1_4:1195952-1195971 | None:intergenic | 35.0% | |
| !!! | AGTTGTGGTTGTGGTTTTAT+TGG | - | chr1_4:1195951-1195970 | Msa0142280:CDS | 35.0% |
| !!! | GTTGTGGTTGTGGTTTTATT+GGG | - | chr1_4:1195952-1195971 | Msa0142280:CDS | 35.0% |
| ATTCAATAAGAGAAGAGGAG+TGG | - | chr1_4:1196075-1196094 | Msa0142280:intron | 35.0% | |
| AGAGAAACAGTAGTTGTAGA+AGG | + | chr1_4:1196242-1196261 | None:intergenic | 35.0% | |
| !! | GTTGGAATTAGTTTGACTTG+AGG | + | chr1_4:1196278-1196297 | None:intergenic | 35.0% |
| TAAGACAAGGAGTAGTTACA+TGG | + | chr1_4:1196302-1196321 | None:intergenic | 35.0% | |
| GTGATTTATGCTTATGTTGG+AGG | + | chr1_4:1196355-1196374 | None:intergenic | 35.0% | |
| AAAGCGTAACATACAGGTTA+AGG | - | chr1_4:1196887-1196906 | Msa0142280:CDS | 35.0% | |
| GGTAGAAATGATGCTTATTG+AGG | - | chr1_4:1196908-1196927 | Msa0142280:CDS | 35.0% | |
| AATAAAACCACAACCACAAC+TGG | + | chr1_4:1195952-1195971 | None:intergenic | 35.0% | |
| !!! | AGTTGTGGTTGTGGTTTTAT+TGG | - | chr1_4:1195951-1195970 | Msa0142280:CDS | 35.0% |
| !!! | GTTGTGGTTGTGGTTTTATT+GGG | - | chr1_4:1195952-1195971 | Msa0142280:CDS | 35.0% |
| ATTCAATAAGAGAAGAGGAG+TGG | - | chr1_4:1196075-1196094 | Msa0142280:intron | 35.0% | |
| AGAGAAACAGTAGTTGTAGA+AGG | + | chr1_4:1196242-1196261 | None:intergenic | 35.0% | |
| !! | GTTGGAATTAGTTTGACTTG+AGG | + | chr1_4:1196278-1196297 | None:intergenic | 35.0% |
| TAAGACAAGGAGTAGTTACA+TGG | + | chr1_4:1196302-1196321 | None:intergenic | 35.0% | |
| GTGATTTATGCTTATGTTGG+AGG | + | chr1_4:1196355-1196374 | None:intergenic | 35.0% | |
| AAAGCGTAACATACAGGTTA+AGG | - | chr1_4:1196887-1196906 | Msa0142280:CDS | 35.0% | |
| GGTAGAAATGATGCTTATTG+AGG | - | chr1_4:1196908-1196927 | Msa0142280:CDS | 35.0% | |
| GATGATGAAATCTCCAGTTG+TGG | - | chr1_4:1195936-1195955 | Msa0142280:CDS | 40.0% | |
| ! | TGATGTTGTTTATGTGGCAG+TGG | - | chr1_4:1196154-1196173 | Msa0142280:intron | 40.0% |
| ! | GATGTTGTTTATGTGGCAGT+GGG | - | chr1_4:1196155-1196174 | Msa0142280:intron | 40.0% |
| ! | AAATGGTGGAAGTTCAAGCA+TGG | - | chr1_4:1196181-1196200 | Msa0142280:intron | 40.0% |
| !! | AGTAGTTGTAGAAGGTGTCA+CGG | + | chr1_4:1196234-1196253 | None:intergenic | 40.0% |
| AAGGAGTAGTTACATGGAGT+TGG | + | chr1_4:1196296-1196315 | None:intergenic | 40.0% | |
| AGAAGGTTTCATGAAGCAAG+AGG | - | chr1_4:1196740-1196759 | Msa0142280:CDS | 40.0% | |
| AAGCCATTGTGGAACTTGTA+GGG | - | chr1_4:1196946-1196965 | Msa0142280:CDS | 40.0% | |
| TTTCCCTACAAGTTCCACAA+TGG | + | chr1_4:1196952-1196971 | None:intergenic | 40.0% | |
| GATGATGAAATCTCCAGTTG+TGG | - | chr1_4:1195936-1195955 | Msa0142280:CDS | 40.0% | |
| ! | TGATGTTGTTTATGTGGCAG+TGG | - | chr1_4:1196154-1196173 | Msa0142280:intron | 40.0% |
| ! | GATGTTGTTTATGTGGCAGT+GGG | - | chr1_4:1196155-1196174 | Msa0142280:intron | 40.0% |
| ! | AAATGGTGGAAGTTCAAGCA+TGG | - | chr1_4:1196181-1196200 | Msa0142280:intron | 40.0% |
| !! | AGTAGTTGTAGAAGGTGTCA+CGG | + | chr1_4:1196234-1196253 | None:intergenic | 40.0% |
| AAGGAGTAGTTACATGGAGT+TGG | + | chr1_4:1196296-1196315 | None:intergenic | 40.0% | |
| AGAAGGTTTCATGAAGCAAG+AGG | - | chr1_4:1196740-1196759 | Msa0142280:CDS | 40.0% | |
| AAGCCATTGTGGAACTTGTA+GGG | - | chr1_4:1196946-1196965 | Msa0142280:CDS | 40.0% | |
| TTTCCCTACAAGTTCCACAA+TGG | + | chr1_4:1196952-1196971 | None:intergenic | 40.0% | |
| GAAATCTCCAGTTGTGGTTG+TGG | - | chr1_4:1195942-1195961 | Msa0142280:CDS | 45.0% | |
| AATTTCGGAGACGACGATGA+TGG | - | chr1_4:1196002-1196021 | Msa0142280:CDS | 45.0% | |
| TATGTGGCAGTGGGAACAAA+TGG | - | chr1_4:1196164-1196183 | Msa0142280:intron | 45.0% | |
| !! | CAAGCATGGAAGCACTTTCA+TGG | - | chr1_4:1196195-1196214 | Msa0142280:intron | 45.0% |
| TGACTTGAGGGAAAACGTGT+AGG | + | chr1_4:1196265-1196284 | None:intergenic | 45.0% | |
| GAAGCCATTGTGGAACTTGT+AGG | - | chr1_4:1196945-1196964 | Msa0142280:CDS | 45.0% | |
| GAAATCTCCAGTTGTGGTTG+TGG | - | chr1_4:1195942-1195961 | Msa0142280:CDS | 45.0% | |
| AATTTCGGAGACGACGATGA+TGG | - | chr1_4:1196002-1196021 | Msa0142280:CDS | 45.0% | |
| TATGTGGCAGTGGGAACAAA+TGG | - | chr1_4:1196164-1196183 | Msa0142280:intron | 45.0% | |
| !! | CAAGCATGGAAGCACTTTCA+TGG | - | chr1_4:1196195-1196214 | Msa0142280:intron | 45.0% |
| TGACTTGAGGGAAAACGTGT+AGG | + | chr1_4:1196265-1196284 | None:intergenic | 45.0% | |
| GAAGCCATTGTGGAACTTGT+AGG | - | chr1_4:1196945-1196964 | Msa0142280:CDS | 45.0% | |
| ! | AGGTGTCACGGCATGTTTCA+AGG | + | chr1_4:1196222-1196241 | None:intergenic | 50.0% |
| CAACGTTGCTGAAGCCATTG+TGG | - | chr1_4:1196935-1196954 | Msa0142280:CDS | 50.0% | |
| ! | AGGTGTCACGGCATGTTTCA+AGG | + | chr1_4:1196222-1196241 | None:intergenic | 50.0% |
| CAACGTTGCTGAAGCCATTG+TGG | - | chr1_4:1196935-1196954 | Msa0142280:CDS | 50.0% | |
| GTGGCAGTGGGAACAAATGG+TGG | - | chr1_4:1196167-1196186 | Msa0142280:intron | 55.0% | |
| GTGGCAGTGGGAACAAATGG+TGG | - | chr1_4:1196167-1196186 | Msa0142280:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 1195885 | 1197016 | 1195885 | ID=Msa0142280;Name=Msa0142280 |
| chr1_4 | mRNA | 1195885 | 1197016 | 1195885 | ID=Msa0142280-mRNA-1;Parent=Msa0142280;Name=Msa0142280-mRNA-1;_AED=0.04;_eAED=0.06;_QI=0|0|0|1|0|0|2|0|193 |
| chr1_4 | exon | 1196586 | 1197016 | 1196586 | ID=Msa0142280-mRNA-1:exon:427;Parent=Msa0142280-mRNA-1 |
| chr1_4 | exon | 1195885 | 1196032 | 1195885 | ID=Msa0142280-mRNA-1:exon:426;Parent=Msa0142280-mRNA-1 |
| chr1_4 | CDS | 1196586 | 1197016 | 1196586 | ID=Msa0142280-mRNA-1:cds;Parent=Msa0142280-mRNA-1 |
| chr1_4 | CDS | 1195885 | 1196032 | 1195885 | ID=Msa0142280-mRNA-1:cds;Parent=Msa0142280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
