Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150810 | XP_003623196.1 | 94.643 | 224 | 12 | 0 | 1 | 224 | 1 | 224 | 1.12e-154 | 438 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150810 | sp|P32110|GSTX6_SOYBN | 71.111 | 225 | 64 | 1 | 1 | 224 | 1 | 225 | 2.02e-115 | 331 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150810 | G7L6H0 | 94.643 | 224 | 12 | 0 | 1 | 224 | 1 | 224 | 5.33e-155 | 438 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007470 | Msa1150810 | 0.809655 | 1.699818e-50 | -8.615850e-47 |
| Msa0009340 | Msa1150810 | 0.814969 | 1.175372e-51 | -8.615850e-47 |
| Msa0012710 | Msa1150810 | 0.822612 | 2.158725e-53 | -8.615850e-47 |
| Msa0015090 | Msa1150810 | 0.803398 | 3.552457e-49 | -8.615850e-47 |
| Msa0017320 | Msa1150810 | 0.841483 | 4.623998e-58 | -8.615850e-47 |
| Msa0042270 | Msa1150810 | 0.804393 | 2.207080e-49 | -8.615850e-47 |
| Msa0049910 | Msa1150810 | 0.805462 | 1.319707e-49 | -8.615850e-47 |
| Msa0051210 | Msa1150810 | 0.807251 | 5.538104e-50 | -8.615850e-47 |
| Msa0051450 | Msa1150810 | 0.820884 | 5.418265e-53 | -8.615850e-47 |
| Msa0055640 | Msa1150810 | 0.820617 | 6.240001e-53 | -8.615850e-47 |
| Msa0061500 | Msa1150810 | 0.815340 | 9.718583e-52 | -8.615850e-47 |
| Msa0065650 | Msa1150810 | 0.817370 | 3.416470e-52 | -8.615850e-47 |
| Msa0092410 | Msa1150810 | 0.838117 | 3.480009e-57 | -8.615850e-47 |
| Msa0101830 | Msa1150810 | 0.831084 | 2.040121e-55 | -8.615850e-47 |
| Msa0103860 | Msa1150810 | 0.804220 | 2.397955e-49 | -8.615850e-47 |
| Msa0109590 | Msa1150810 | 0.805235 | 1.472225e-49 | -8.615850e-47 |
| Msa0111080 | Msa1150810 | 0.804163 | 2.465253e-49 | -8.615850e-47 |
| Msa0654620 | Msa1150810 | 0.809825 | 1.562409e-50 | -8.615850e-47 |
| Msa0679810 | Msa1150810 | 0.821283 | 4.383367e-53 | -8.615850e-47 |
| Msa0689780 | Msa1150810 | 0.801827 | 7.493801e-49 | -8.615850e-47 |
| Msa0692650 | Msa1150810 | 0.837676 | 4.517779e-57 | -8.615850e-47 |
| Msa0711150 | Msa1150810 | 0.811114 | 8.232185e-51 | -8.615850e-47 |
| Msa0721340 | Msa1150810 | 0.814444 | 1.536264e-51 | -8.615850e-47 |
| Msa0731180 | Msa1150810 | 0.806145 | 9.483543e-50 | -8.615850e-47 |
| Msa0742150 | Msa1150810 | 0.874171 | 8.316981e-68 | -8.615850e-47 |
| Msa0770170 | Msa1150810 | 0.800169 | 1.634917e-48 | -8.615850e-47 |
| Msa0771580 | Msa1150810 | 0.811258 | 7.658533e-51 | -8.615850e-47 |
| Msa0775560 | Msa1150810 | 0.836284 | 1.023859e-56 | -8.615850e-47 |
| Msa0786070 | Msa1150810 | 0.886522 | 3.180335e-72 | -8.615850e-47 |
| Msa0786780 | Msa1150810 | 0.806362 | 8.534243e-50 | -8.615850e-47 |
| Msa0788540 | Msa1150810 | 0.814546 | 1.458221e-51 | -8.615850e-47 |
| Msa0805910 | Msa1150810 | 0.816041 | 6.785425e-52 | -8.615850e-47 |
| Msa0805920 | Msa1150810 | 0.801559 | 8.504963e-49 | -8.615850e-47 |
| Msa0812950 | Msa1150810 | 0.847275 | 1.282197e-59 | -8.615850e-47 |
| Msa0823440 | Msa1150810 | 0.850994 | 1.184864e-60 | -8.615850e-47 |
| Msa0138020 | Msa1150810 | 0.827421 | 1.579534e-54 | -8.615850e-47 |
| Msa0142280 | Msa1150810 | 0.817232 | 3.668693e-52 | -8.615850e-47 |
| Msa0152560 | Msa1150810 | 0.830582 | 2.707274e-55 | -8.615850e-47 |
| Msa0155340 | Msa1150810 | 0.841163 | 5.612147e-58 | -8.615850e-47 |
| Msa0187920 | Msa1150810 | 0.818619 | 1.783119e-52 | -8.615850e-47 |
| Msa0189610 | Msa1150810 | 0.822574 | 2.202388e-53 | -8.615850e-47 |
| Msa0194530 | Msa1150810 | 0.821265 | 4.425096e-53 | -8.615850e-47 |
| Msa0196670 | Msa1150810 | 0.827208 | 1.776357e-54 | -8.615850e-47 |
| Msa0197610 | Msa1150810 | 0.803009 | 4.276057e-49 | -8.615850e-47 |
| Msa0200850 | Msa1150810 | 0.803731 | 3.030425e-49 | -8.615850e-47 |
| Msa0201530 | Msa1150810 | 0.801640 | 8.186088e-49 | -8.615850e-47 |
| Msa0225470 | Msa1150810 | 0.843427 | 1.410949e-58 | -8.615850e-47 |
| Msa0233370 | Msa1150810 | 0.813628 | 2.325242e-51 | -8.615850e-47 |
| Msa0236070 | Msa1150810 | 0.845615 | 3.637545e-59 | -8.615850e-47 |
| Msa0364790 | Msa1150810 | 0.847664 | 1.002516e-59 | -8.615850e-47 |
| Msa0371950 | Msa1150810 | 0.830933 | 2.221797e-55 | -8.615850e-47 |
| Msa0403490 | Msa1150810 | 0.804962 | 1.679085e-49 | -8.615850e-47 |
| Msa0410580 | Msa1150810 | 0.821167 | 4.662092e-53 | -8.615850e-47 |
| Msa0438040 | Msa1150810 | 0.815909 | 7.258727e-52 | -8.615850e-47 |
| Msa0456770 | Msa1150810 | 0.814790 | 1.287545e-51 | -8.615850e-47 |
| Msa0481280 | Msa1150810 | 0.814848 | 1.249773e-51 | -8.615850e-47 |
| Msa1013070 | Msa1150810 | 0.820110 | 8.153196e-53 | -8.615850e-47 |
| Msa1023300 | Msa1150810 | 0.957476 | 2.475018e-115 | -8.615850e-47 |
| Msa1023310 | Msa1150810 | 0.847655 | 1.007674e-59 | -8.615850e-47 |
| Msa1026640 | Msa1150810 | 0.806081 | 9.779941e-50 | -8.615850e-47 |
| Msa1050410 | Msa1150810 | 0.814790 | 1.287246e-51 | -8.615850e-47 |
| Msa1054510 | Msa1150810 | 0.801248 | 9.845766e-49 | -8.615850e-47 |
| Msa1062020 | Msa1150810 | 0.936811 | 9.544654e-98 | -8.615850e-47 |
| Msa1062030 | Msa1150810 | 0.894313 | 2.772238e-75 | -8.615850e-47 |
| Msa1062040 | Msa1150810 | 0.817840 | 2.676823e-52 | -8.615850e-47 |
| Msa1071320 | Msa1150810 | 0.800236 | 1.584172e-48 | -8.615850e-47 |
| Msa1077340 | Msa1150810 | 0.819075 | 1.404684e-52 | -8.615850e-47 |
| Msa1094280 | Msa1150810 | 0.812236 | 4.693725e-51 | -8.615850e-47 |
| Msa1107190 | Msa1150810 | 0.849138 | 3.919899e-60 | -8.615850e-47 |
| Msa0243480 | Msa1150810 | 0.812182 | 4.821812e-51 | -8.615850e-47 |
| Msa0244140 | Msa1150810 | 0.825544 | 4.423000e-54 | -8.615850e-47 |
| Msa0244190 | Msa1150810 | 0.825238 | 5.227247e-54 | -8.615850e-47 |
| Msa0257500 | Msa1150810 | 0.804662 | 1.939711e-49 | -8.615850e-47 |
| Msa0268140 | Msa1150810 | 0.821702 | 3.507827e-53 | -8.615850e-47 |
| Msa0269560 | Msa1150810 | 0.833979 | 3.907400e-56 | -8.615850e-47 |
| Msa0271550 | Msa1150810 | 0.828869 | 7.073645e-55 | -8.615850e-47 |
| Msa0278580 | Msa1150810 | 0.800477 | 1.414794e-48 | -8.615850e-47 |
| Msa0281930 | Msa1150810 | 0.805776 | 1.133764e-49 | -8.615850e-47 |
| Msa0299000 | Msa1150810 | 0.820953 | 5.223796e-53 | -8.615850e-47 |
| Msa0310440 | Msa1150810 | 0.809051 | 2.290015e-50 | -8.615850e-47 |
| Msa0311470 | Msa1150810 | 0.811346 | 7.329530e-51 | -8.615850e-47 |
| Msa0319290 | Msa1150810 | 0.840621 | 7.789212e-58 | -8.615850e-47 |
| Msa0321080 | Msa1150810 | 0.812363 | 4.403366e-51 | -8.615850e-47 |
| Msa0357830 | Msa1150810 | 0.800910 | 1.154628e-48 | -8.615850e-47 |
| Msa1107200 | Msa1150810 | 0.827092 | 1.893046e-54 | -8.615850e-47 |
| Msa1107260 | Msa1150810 | 0.800882 | 1.170078e-48 | -8.615850e-47 |
| Msa1115280 | Msa1150810 | 0.827111 | 1.873267e-54 | -8.615850e-47 |
| Msa1138530 | Msa1150810 | 0.828088 | 1.092098e-54 | -8.615850e-47 |
| Msa1144040 | Msa1150810 | 0.808508 | 2.991959e-50 | -8.615850e-47 |
| Msa1150780 | Msa1150810 | 0.806092 | 9.729033e-50 | -8.615850e-47 |
| Msa1150790 | Msa1150810 | 0.891234 | 4.786097e-74 | -8.615850e-47 |
| Msa1150800 | Msa1150810 | 0.973760 | 5.612513e-137 | -8.615850e-47 |
| Msa1150810 | Msa1182430 | 0.821788 | 3.350566e-53 | -8.615850e-47 |
| Msa1150810 | Msa1200250 | 0.821341 | 4.250531e-53 | -8.615850e-47 |
| Msa1150810 | Msa1209190 | 0.806016 | 1.009614e-49 | -8.615850e-47 |
| Msa1150810 | Msa1218580 | 0.804995 | 1.652441e-49 | -8.615850e-47 |
| Msa1150810 | Msa1224200 | 0.808857 | 2.520343e-50 | -8.615850e-47 |
| Msa1150810 | Msa1246700 | 0.828569 | 8.360030e-55 | -8.615850e-47 |
| Msa1150810 | Msa1270660 | 0.811320 | 7.427409e-51 | -8.615850e-47 |
| Msa1150810 | Msa1276340 | 0.817888 | 2.610543e-52 | -8.615850e-47 |
| Msa1150810 | Msa1279480 | 0.850978 | 1.196933e-60 | -8.615850e-47 |
| Msa1150810 | Msa1291450 | 0.818703 | 1.707178e-52 | -8.615850e-47 |
| Msa1150810 | Msa1307180 | 0.804707 | 1.898354e-49 | -8.615850e-47 |
| Msa1150810 | Msa1316360 | 0.813595 | 2.364255e-51 | -8.615850e-47 |
| Msa1150810 | Msa1332050 | 0.804300 | 2.308150e-49 | -8.615850e-47 |
| Msa1150810 | Msa1335230 | 0.810801 | 9.619863e-51 | -8.615850e-47 |
| Msa1150810 | Msa1338400 | 0.807094 | 5.977662e-50 | -8.615850e-47 |
| Msa1150810 | Msa1347330 | 0.835116 | 2.023428e-56 | -8.615850e-47 |
| Msa1150810 | Msa1352660 | 0.815938 | 7.153111e-52 | -8.615850e-47 |
| Msa1150810 | Msa1355890 | 0.871388 | 7.098106e-67 | -8.615850e-47 |
| Msa1150810 | Msa1365270 | 0.803452 | 3.462399e-49 | -8.615850e-47 |
| Msa1150810 | Msa1372280 | 0.817207 | 3.716515e-52 | -8.615850e-47 |
| Msa1150810 | Msa1376450 | 0.818460 | 1.937897e-52 | -8.615850e-47 |
| Msa1150810 | Msa1377080 | 0.809598 | 1.748518e-50 | -8.615850e-47 |
| Msa1150810 | Msa1420270 | 0.808087 | 3.680117e-50 | -8.615850e-47 |
| Msa1150810 | Msa1421210 | 0.842279 | 2.848978e-58 | -8.615850e-47 |
| Msa1150810 | Msa1423820 | 0.801278 | 9.709642e-49 | -8.615850e-47 |
| Msa1150810 | Msa1430130 | 0.820019 | 8.556812e-53 | -8.615850e-47 |
| Msa1150810 | Msa1430550 | 0.835108 | 2.032353e-56 | -8.615850e-47 |
| Msa1150810 | Msa1436600 | 0.806967 | 6.359252e-50 | -8.615850e-47 |
| Msa1150810 | Msa1448700 | 0.818164 | 2.260640e-52 | -8.615850e-47 |
| Msa1150810 | Msa1457160 | 0.800516 | 1.389670e-48 | -8.615850e-47 |
| Msa1150810 | Msa1458510 | 0.802165 | 6.385267e-49 | -8.615850e-47 |
| Msa1150810 | Msa1460750 | 0.821860 | 3.225595e-53 | -8.615850e-47 |
| Msa1150810 | Msa1460800 | 0.817141 | 3.846647e-52 | -8.615850e-47 |
| Msa1150810 | Msa1462360 | 0.821115 | 4.794047e-53 | -8.615850e-47 |
| Msa1150810 | Msa1463600 | 0.804767 | 1.844675e-49 | -8.615850e-47 |
| Msa0507610 | Msa1150810 | 0.806445 | 8.197924e-50 | -8.615850e-47 |
| Msa0534870 | Msa1150810 | 0.801464 | 8.895474e-49 | -8.615850e-47 |
| Msa0545290 | Msa1150810 | 0.821900 | 3.157414e-53 | -8.615850e-47 |
| Msa0600890 | Msa1150810 | 0.821024 | 5.030851e-53 | -8.615850e-47 |
| Msa0847470 | Msa1150810 | 0.826601 | 2.480757e-54 | -8.615850e-47 |
| Msa0853440 | Msa1150810 | 0.844814 | 5.988341e-59 | -8.615850e-47 |
| Msa0862280 | Msa1150810 | 0.847168 | 1.371488e-59 | -8.615850e-47 |
| Msa0880810 | Msa1150810 | 0.805274 | 1.444901e-49 | -8.615850e-47 |
| Msa0882400 | Msa1150810 | 0.836768 | 7.709435e-57 | -8.615850e-47 |
| Msa0898320 | Msa1150810 | 0.802065 | 6.695884e-49 | -8.615850e-47 |
| Msa0932100 | Msa1150810 | 0.858465 | 8.087624e-63 | -8.615850e-47 |
| Msa0932190 | Msa1150810 | 0.848563 | 5.660469e-60 | -8.615850e-47 |
| Msa0935770 | Msa1150810 | 0.804058 | 2.592145e-49 | -8.615850e-47 |
| Msa0970230 | Msa1150810 | 0.858579 | 7.477187e-63 | -8.615850e-47 |
| Msa0972810 | Msa1150810 | 0.813000 | 3.193201e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150810 | MtrunA17_Chr7g0240581 | 94.643 | 224 | 12 | 0 | 1 | 224 | 1 | 224 | 1.03e-158 | 438 |
| Msa1150810 | MtrunA17_Chr7g0240561 | 79.911 | 224 | 45 | 0 | 1 | 224 | 1 | 224 | 3.63e-135 | 378 |
| Msa1150810 | MtrunA17_Chr7g0240551 | 77.232 | 224 | 51 | 0 | 1 | 224 | 1 | 224 | 5.15e-130 | 365 |
| Msa1150810 | MtrunA17_Chr7g0240531 | 74.554 | 224 | 57 | 0 | 1 | 224 | 1 | 224 | 3.89e-124 | 350 |
| Msa1150810 | MtrunA17_Chr7g0240511 | 75.893 | 224 | 49 | 1 | 1 | 224 | 1 | 219 | 3.30e-123 | 348 |
| Msa1150810 | MtrunA17_Chr7g0240541 | 73.214 | 224 | 60 | 0 | 1 | 224 | 1 | 224 | 7.25e-122 | 345 |
| Msa1150810 | MtrunA17_Chr7g0240521 | 76.444 | 225 | 52 | 1 | 1 | 224 | 8 | 232 | 3.66e-116 | 330 |
| Msa1150810 | MtrunA17_Chr7g0240681 | 68.889 | 225 | 69 | 1 | 1 | 224 | 1 | 225 | 2.08e-114 | 326 |
| Msa1150810 | MtrunA17_Chr7g0240631 | 67.265 | 223 | 73 | 0 | 1 | 223 | 1 | 223 | 7.90e-114 | 324 |
| Msa1150810 | MtrunA17_Chr7g0240641 | 67.713 | 223 | 72 | 0 | 1 | 223 | 1 | 223 | 1.82e-113 | 323 |
| Msa1150810 | MtrunA17_Chr7g0240611 | 66.368 | 223 | 71 | 1 | 1 | 223 | 1 | 219 | 8.48e-107 | 306 |
| Msa1150810 | MtrunA17_Chr7g0240691 | 62.557 | 219 | 81 | 1 | 6 | 223 | 36 | 254 | 1.01e-102 | 297 |
| Msa1150810 | MtrunA17_Chr4g0008791 | 60.987 | 223 | 87 | 0 | 1 | 223 | 1 | 223 | 1.22e-102 | 296 |
| Msa1150810 | MtrunA17_Chr7g0240671 | 64.734 | 207 | 69 | 1 | 8 | 214 | 5 | 207 | 3.90e-96 | 280 |
| Msa1150810 | MtrunA17_Chr4g0008781 | 62.150 | 214 | 79 | 2 | 3 | 215 | 4 | 216 | 6.95e-94 | 274 |
| Msa1150810 | MtrunA17_Chr7g0240651 | 65.315 | 222 | 73 | 1 | 1 | 222 | 1 | 218 | 2.02e-92 | 270 |
| Msa1150810 | MtrunA17_Chr7g0240661 | 64.019 | 214 | 73 | 1 | 1 | 214 | 1 | 210 | 7.50e-88 | 259 |
| Msa1150810 | MtrunA17_Chr1g0196771 | 45.249 | 221 | 116 | 2 | 5 | 222 | 1 | 219 | 2.04e-65 | 202 |
| Msa1150810 | MtrunA17_Chr6g0483141 | 47.826 | 207 | 106 | 2 | 8 | 213 | 4 | 209 | 6.12e-64 | 198 |
| Msa1150810 | MtrunA17_Chr8g0379581 | 47.222 | 216 | 112 | 2 | 4 | 218 | 2 | 216 | 2.02e-63 | 196 |
| Msa1150810 | MtrunA17_Chr3g0132581 | 48.636 | 220 | 111 | 2 | 5 | 223 | 3 | 221 | 2.24e-62 | 194 |
| Msa1150810 | MtrunA17_Chr8g0379561 | 45.161 | 217 | 116 | 3 | 1 | 216 | 1 | 215 | 1.46e-58 | 184 |
| Msa1150810 | MtrunA17_Chr1g0212301 | 45.070 | 213 | 114 | 2 | 7 | 216 | 3 | 215 | 2.33e-58 | 183 |
| Msa1150810 | MtrunA17_Chr5g0417011 | 41.892 | 222 | 121 | 3 | 1 | 215 | 1 | 221 | 5.76e-58 | 182 |
| Msa1150810 | MtrunA17_Chr1g0196691 | 42.273 | 220 | 122 | 3 | 8 | 223 | 29 | 247 | 6.30e-56 | 178 |
| Msa1150810 | MtrunA17_Chr1g0196721 | 42.986 | 221 | 120 | 4 | 7 | 223 | 2 | 220 | 2.69e-54 | 173 |
| Msa1150810 | MtrunA17_Chr5g0415411 | 43.182 | 220 | 115 | 3 | 1 | 212 | 1 | 218 | 4.84e-54 | 172 |
| Msa1150810 | MtrunA17_Chr1g0196661 | 42.081 | 221 | 122 | 4 | 8 | 224 | 4 | 222 | 1.94e-53 | 171 |
| Msa1150810 | MtrunA17_Chr8g0363751 | 42.922 | 219 | 117 | 3 | 5 | 215 | 3 | 221 | 1.65e-51 | 166 |
| Msa1150810 | MtrunA17_Chr4g0029341 | 39.906 | 213 | 124 | 2 | 6 | 215 | 3 | 214 | 1.96e-51 | 166 |
| Msa1150810 | MtrunA17_Chr1g0196711 | 41.176 | 221 | 119 | 5 | 8 | 224 | 4 | 217 | 2.59e-50 | 163 |
| Msa1150810 | MtrunA17_Chr2g0312791 | 40.196 | 204 | 118 | 3 | 6 | 207 | 3 | 204 | 3.83e-44 | 147 |
| Msa1150810 | MtrunA17_Chr3g0107731 | 42.000 | 200 | 111 | 4 | 7 | 204 | 9 | 205 | 1.26e-42 | 143 |
| Msa1150810 | MtrunA17_Chr2g0312771 | 37.321 | 209 | 126 | 4 | 6 | 212 | 3 | 208 | 1.28e-42 | 143 |
| Msa1150810 | MtrunA17_Chr2g0312751 | 36.866 | 217 | 129 | 5 | 6 | 217 | 3 | 216 | 1.36e-42 | 143 |
| Msa1150810 | MtrunA17_Chr2g0312781 | 37.799 | 209 | 125 | 4 | 1 | 207 | 15 | 220 | 4.78e-42 | 142 |
| Msa1150810 | MtrunA17_Chr2g0312731 | 37.864 | 206 | 123 | 4 | 6 | 209 | 3 | 205 | 3.18e-41 | 139 |
| Msa1150810 | MtrunA17_Chr4g0069471 | 43.820 | 178 | 96 | 4 | 3 | 177 | 21 | 197 | 1.62e-39 | 135 |
| Msa1150810 | MtrunA17_Chr3g0107741 | 39.901 | 203 | 117 | 4 | 4 | 204 | 6 | 205 | 4.89e-39 | 134 |
| Msa1150810 | MtrunA17_Chr2g0312811 | 37.915 | 211 | 124 | 5 | 6 | 212 | 3 | 210 | 1.69e-38 | 132 |
| Msa1150810 | MtrunA17_Chr5g0433801 | 38.164 | 207 | 123 | 4 | 3 | 207 | 2 | 205 | 1.73e-38 | 132 |
| Msa1150810 | MtrunA17_Chr8g0357241 | 41.270 | 189 | 106 | 4 | 6 | 192 | 3 | 188 | 2.55e-38 | 132 |
| Msa1150810 | MtrunA17_Chr8g0391631 | 46.452 | 155 | 75 | 3 | 7 | 153 | 21 | 175 | 2.72e-38 | 130 |
| Msa1150810 | MtrunA17_Chr2g0312721 | 37.864 | 206 | 123 | 4 | 6 | 209 | 3 | 205 | 3.96e-38 | 132 |
| Msa1150810 | MtrunA17_Chr8g0357211 | 40.957 | 188 | 106 | 4 | 6 | 191 | 3 | 187 | 1.88e-37 | 130 |
| Msa1150810 | MtrunA17_Chr2g0312691 | 38.693 | 199 | 117 | 4 | 8 | 204 | 5 | 200 | 3.04e-36 | 127 |
| Msa1150810 | MtrunA17_Chr2g0312681 | 36.634 | 202 | 123 | 4 | 8 | 207 | 5 | 203 | 1.43e-35 | 125 |
| Msa1150810 | MtrunA17_Chr2g0312711 | 36.715 | 207 | 125 | 4 | 8 | 212 | 5 | 207 | 1.12e-30 | 112 |
| Msa1150810 | MtrunA17_Chr2g0313561 | 44.615 | 65 | 35 | 1 | 51 | 114 | 2 | 66 | 2.76e-15 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150810 | AT3G09270.1 | 50.446 | 224 | 107 | 4 | 3 | 223 | 2 | 224 | 5.21e-76 | 229 |
| Msa1150810 | AT2G29420.1 | 48.402 | 219 | 111 | 2 | 3 | 220 | 5 | 222 | 2.70e-72 | 219 |
| Msa1150810 | AT2G29490.1 | 47.847 | 209 | 106 | 3 | 1 | 207 | 1 | 208 | 3.83e-60 | 188 |
| Msa1150810 | AT2G29450.1 | 43.498 | 223 | 124 | 2 | 3 | 223 | 2 | 224 | 6.21e-57 | 180 |
| Msa1150810 | AT2G29460.1 | 43.694 | 222 | 122 | 3 | 1 | 220 | 1 | 221 | 1.39e-55 | 177 |
| Msa1150810 | AT2G29480.1 | 44.498 | 209 | 113 | 3 | 1 | 207 | 1 | 208 | 2.18e-54 | 174 |
| Msa1150810 | AT1G10370.1 | 43.439 | 221 | 116 | 3 | 1 | 214 | 1 | 219 | 4.43e-53 | 171 |
| Msa1150810 | AT2G29440.1 | 41.778 | 225 | 127 | 4 | 1 | 223 | 1 | 223 | 8.13e-53 | 170 |
| Msa1150810 | AT2G29470.1 | 43.810 | 210 | 114 | 4 | 1 | 207 | 1 | 209 | 1.33e-52 | 169 |
| Msa1150810 | AT1G69930.1 | 39.189 | 222 | 129 | 2 | 2 | 217 | 7 | 228 | 1.55e-51 | 167 |
| Msa1150810 | AT1G10360.1 | 41.262 | 206 | 114 | 2 | 6 | 204 | 4 | 209 | 3.22e-50 | 163 |
| Msa1150810 | AT1G27130.1 | 40.000 | 225 | 126 | 4 | 1 | 217 | 1 | 224 | 3.00e-49 | 161 |
| Msa1150810 | AT1G59700.1 | 44.037 | 218 | 114 | 3 | 5 | 214 | 4 | 221 | 5.30e-49 | 160 |
| Msa1150810 | AT1G59670.1 | 43.269 | 208 | 110 | 3 | 5 | 204 | 4 | 211 | 9.24e-49 | 160 |
| Msa1150810 | AT5G62480.1 | 39.367 | 221 | 123 | 4 | 5 | 215 | 6 | 225 | 2.15e-45 | 151 |
| Msa1150810 | AT1G27140.1 | 38.767 | 227 | 129 | 4 | 1 | 218 | 1 | 226 | 7.32e-45 | 150 |
| Msa1150810 | AT1G78320.1 | 40.865 | 208 | 118 | 4 | 5 | 210 | 2 | 206 | 3.10e-44 | 148 |
| Msa1150810 | AT1G17170.1 | 40.826 | 218 | 121 | 5 | 6 | 220 | 3 | 215 | 3.79e-44 | 147 |
| Msa1150810 | AT1G78370.1 | 40.488 | 205 | 117 | 4 | 10 | 212 | 7 | 208 | 1.55e-43 | 146 |
| Msa1150810 | AT1G78380.1 | 41.063 | 207 | 117 | 4 | 8 | 212 | 5 | 208 | 1.73e-43 | 146 |
| Msa1150810 | AT1G69920.1 | 37.445 | 227 | 132 | 4 | 1 | 217 | 26 | 252 | 1.40e-42 | 144 |
| Msa1150810 | AT1G78340.1 | 41.148 | 209 | 118 | 4 | 6 | 212 | 3 | 208 | 1.54e-42 | 143 |
| Msa1150810 | AT1G74590.1 | 34.361 | 227 | 142 | 3 | 1 | 221 | 1 | 226 | 5.86e-42 | 142 |
| Msa1150810 | AT1G53680.1 | 38.571 | 210 | 124 | 4 | 1 | 207 | 1 | 208 | 9.93e-41 | 139 |
| Msa1150810 | AT1G17180.1 | 37.799 | 209 | 125 | 4 | 6 | 212 | 3 | 208 | 2.36e-39 | 135 |
| Msa1150810 | AT1G78360.1 | 39.904 | 208 | 119 | 5 | 8 | 212 | 5 | 209 | 1.60e-38 | 133 |
| Msa1150810 | AT1G17190.1 | 38.785 | 214 | 124 | 5 | 1 | 212 | 1 | 209 | 1.98e-38 | 133 |
| Msa1150810 | AT3G43800.1 | 35.749 | 207 | 124 | 6 | 4 | 204 | 2 | 205 | 1.63e-35 | 125 |
| Msa1150810 | AT5G62480.2 | 31.364 | 220 | 116 | 4 | 5 | 215 | 6 | 199 | 8.22e-28 | 105 |
| Msa1150810 | AT1G78320.2 | 33.816 | 207 | 107 | 4 | 5 | 210 | 2 | 179 | 1.41e-27 | 104 |
| Msa1150810 | AT5G62480.3 | 31.364 | 220 | 115 | 4 | 5 | 215 | 6 | 198 | 1.96e-27 | 104 |
| Msa1150810 | AT2G02380.1 | 28.837 | 215 | 134 | 6 | 5 | 207 | 9 | 216 | 1.21e-16 | 76.3 |
| Msa1150810 | AT2G02390.1 | 29.358 | 218 | 133 | 7 | 3 | 207 | 4 | 213 | 3.13e-16 | 75.1 |
| Msa1150810 | AT2G02390.3 | 28.444 | 225 | 133 | 8 | 3 | 207 | 4 | 220 | 7.79e-14 | 68.6 |
| Msa1150810 | AT2G02390.2 | 40.206 | 97 | 54 | 2 | 3 | 96 | 4 | 99 | 2.51e-13 | 66.6 |
Find 57 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAGCCTTGGCTCGTTTC+TGG | 0.120947 | 7_4:-34647630 | Msa1150810:CDS |
| TTACATACTTAGGGAATTTA+AGG | 0.207184 | 7_4:-34646312 | Msa1150810:three_prime_UTR |
| GAGCTTAAGGATAATTTCTT+TGG | 0.282538 | 7_4:-34646581 | Msa1150810:CDS |
| TAAGGATCAGAAGGCAATAT+TGG | 0.299422 | 7_4:+34647655 | None:intergenic |
| ACAGGAACCTTCTTATAAAC+AGG | 0.304362 | 7_4:+34647754 | None:intergenic |
| AGTTATGGTGTTACATACTT+AGG | 0.333531 | 7_4:-34646322 | Msa1150810:three_prime_UTR |
| GCCTCCTAGAGAAGGACTTT+TGG | 0.337294 | 7_4:-34646393 | Msa1150810:CDS |
| AATTCTTGAGAATGAGCTTA+AGG | 0.354197 | 7_4:-34646594 | Msa1150810:CDS |
| TTCTTTGGTGGAGAGGAGAT+TGG | 0.368042 | 7_4:-34646566 | Msa1150810:CDS |
| GGCAATTTATCCTTAACAAC+TGG | 0.375316 | 7_4:+34646413 | None:intergenic |
| TTGACTCCATTTGTAAAGCT+TGG | 0.384299 | 7_4:+34646451 | None:intergenic |
| CACCAACCATCCAGTTGTTA+AGG | 0.388600 | 7_4:-34646423 | Msa1150810:CDS |
| TGACTCCATTTGTAAAGCTT+GGG | 0.390868 | 7_4:+34646452 | None:intergenic |
| CACTAAGATGGCATCAAATC+AGG | 0.391111 | 7_4:-34647914 | Msa1150810:exon |
| CTTCAAAATAGATTAAGTTA+TGG | 0.394308 | 7_4:-34646337 | Msa1150810:exon |
| GGAATTTAAGGAGAATTGTC+TGG | 0.396718 | 7_4:-34646300 | Msa1150810:three_prime_UTR |
| TTTGTTGCTTCTTGTACAAT+GGG | 0.408906 | 7_4:+34646503 | None:intergenic |
| TACAAATATGAGTTAGAAAA+GGG | 0.419037 | 7_4:-34647811 | Msa1150810:CDS |
| GTTTGTTGCTTCTTGTACAA+TGG | 0.430175 | 7_4:+34646502 | None:intergenic |
| ATCACAAGGGATTCTGATAT+AGG | 0.433145 | 7_4:+34647712 | None:intergenic |
| GACCAAGTTCATAGATGATA+AGG | 0.434027 | 7_4:-34647608 | Msa1150810:intron |
| GTTATGGTGTTACATACTTA+GGG | 0.434449 | 7_4:-34646321 | Msa1150810:three_prime_UTR |
| ATACAAATATGAGTTAGAAA+AGG | 0.446746 | 7_4:-34647812 | Msa1150810:CDS |
| CTTAAGGATAATTTCTTTGG+TGG | 0.454634 | 7_4:-34646578 | Msa1150810:CDS |
| GGAGATTGCTCTAACATTGA+AGG | 0.460355 | 7_4:-34647842 | Msa1150810:CDS |
| TTTAAACAGTGAGAAATCCT+AGG | 0.469805 | 7_4:+34646236 | None:intergenic |
| ATACAACCCTGTTTATAAGA+AGG | 0.470144 | 7_4:-34647761 | Msa1150810:CDS |
| AATTTCCCAAGCTTTACAAA+TGG | 0.474830 | 7_4:-34646457 | Msa1150810:CDS |
| TACCTTATCATCTATGAACT+TGG | 0.479710 | 7_4:+34647606 | None:intergenic |
| ATCCTTAACAACTGGATGGT+TGG | 0.488666 | 7_4:+34646421 | None:intergenic |
| ATCTCCACCCTACTCACAAA+TGG | 0.497901 | 7_4:+34647859 | None:intergenic |
| AACTGTAAAAGAAACAATCC+TGG | 0.514445 | 7_4:-34648013 | None:intergenic |
| GGCAAGTCCATTTGTGAGTA+GGG | 0.523330 | 7_4:-34647866 | Msa1150810:CDS |
| GGATAATTTCTTTGGTGGAG+AGG | 0.526031 | 7_4:-34646573 | Msa1150810:CDS |
| CTACTTCTATATATAGAGCC+AGG | 0.531192 | 7_4:+34647995 | None:intergenic |
| ATAGAATTGAAGCACTAAGA+TGG | 0.544329 | 7_4:-34647926 | Msa1150810:exon |
| GATAAATTGCCTCCTAGAGA+AGG | 0.547220 | 7_4:-34646401 | Msa1150810:CDS |
| TGATCCTTACAAAAGAGCCT+TGG | 0.548089 | 7_4:-34647641 | Msa1150810:CDS |
| TTGAGTATGTCGATGAGACC+TGG | 0.549849 | 7_4:-34647687 | Msa1150810:CDS |
| TAAGCCAAAAGTCCTTCTCT+AGG | 0.550201 | 7_4:+34646389 | None:intergenic |
| AGAACGTGAGAAAGCTATTG+AGG | 0.557970 | 7_4:-34646636 | Msa1150810:CDS |
| ATTTATCCTTAACAACTGGA+TGG | 0.561475 | 7_4:+34646417 | None:intergenic |
| AATATGAGTTAGAAAAGGGA+GGG | 0.564400 | 7_4:-34647807 | Msa1150810:CDS |
| AAATATGAGTTAGAAAAGGG+AGG | 0.578650 | 7_4:-34647808 | Msa1150810:CDS |
| CAGGAACCTTCTTATAAACA+GGG | 0.585709 | 7_4:+34647755 | None:intergenic |
| AAATTAGATATATGCAACCT+AGG | 0.591911 | 7_4:-34646253 | Msa1150810:three_prime_UTR |
| GAGATTGCTCTAACATTGAA+GGG | 0.597295 | 7_4:-34647841 | Msa1150810:CDS |
| CGACATACTCAAGAATCACA+AGG | 0.607291 | 7_4:+34647698 | None:intergenic |
| TGGCAAGTCCATTTGTGAGT+AGG | 0.615908 | 7_4:-34647867 | Msa1150810:CDS |
| TAATTAAAATAGTGTAAACA+AGG | 0.616902 | 7_4:+34646197 | None:intergenic |
| GCCAAAAGTCCTTCTCTAGG+AGG | 0.619286 | 7_4:+34646392 | None:intergenic |
| ACCAGTGTTTAAGTGCTGCA+CGG | 0.628510 | 7_4:-34646685 | Msa1150810:intron |
| TTATCATTATGAACTAACAC+AGG | 0.667310 | 7_4:+34647736 | None:intergenic |
| CTTGGTCCAGAAACGAGCCA+AGG | 0.682377 | 7_4:+34647624 | None:intergenic |
| TTGTTGCTTCTTGTACAATG+GGG | 0.684989 | 7_4:+34646504 | None:intergenic |
| AAGTCCATTTGTGAGTAGGG+TGG | 0.696953 | 7_4:-34647863 | Msa1150810:CDS |
| GACATACTCAAGAATCACAA+GGG | 0.702786 | 7_4:+34647699 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGTTTTCATTTTTAAATTA+CGG | - | chr7_4:34646980-34646999 | Msa1150810:intron | 10.0% |
| !!! | TACTTTTCTTTTTAAAATTA+CGG | + | chr7_4:34647109-34647128 | None:intergenic | 10.0% |
| !!! | TAGTTTTCATTTTTAAATTA+CGG | - | chr7_4:34646980-34646999 | Msa1150810:intron | 10.0% |
| !!! | TACTTTTCTTTTTAAAATTA+CGG | + | chr7_4:34647109-34647128 | None:intergenic | 10.0% |
| !! | AATAAATATGATATTTGAAG+CGG | + | chr7_4:34647213-34647232 | None:intergenic | 15.0% |
| !! | AATATTTAAGAAGAATAATC+TGG | - | chr7_4:34647343-34647362 | Msa1150810:intron | 15.0% |
| !! | TAATTAAAATAGTGTAAACA+AGG | + | chr7_4:34647968-34647987 | None:intergenic | 15.0% |
| !! | AATAAATATGATATTTGAAG+CGG | + | chr7_4:34647213-34647232 | None:intergenic | 15.0% |
| !! | AATATTTAAGAAGAATAATC+TGG | - | chr7_4:34647343-34647362 | Msa1150810:intron | 15.0% |
| !! | TAATTAAAATAGTGTAAACA+AGG | + | chr7_4:34647968-34647987 | None:intergenic | 15.0% |
| !! | ATACAAATATGAGTTAGAAA+AGG | - | chr7_4:34646350-34646369 | Msa1150810:CDS | 20.0% |
| !! | TACAAATATGAGTTAGAAAA+GGG | - | chr7_4:34646351-34646370 | Msa1150810:CDS | 20.0% |
| !!! | TCACTTTTAAAGTGTATAAA+TGG | - | chr7_4:34646654-34646673 | Msa1150810:CDS | 20.0% |
| !!! | CACTTTTAAAGTGTATAAAT+GGG | - | chr7_4:34646655-34646674 | Msa1150810:CDS | 20.0% |
| !!! | ACTTTTAAAGTGTATAAATG+GGG | - | chr7_4:34646656-34646675 | Msa1150810:CDS | 20.0% |
| !!! | TAAAATATTTCAAAAGCATG+TGG | - | chr7_4:34646789-34646808 | Msa1150810:intron | 20.0% |
| !!! | ACACTGGTTTTAAAAAATTA+AGG | + | chr7_4:34647465-34647484 | None:intergenic | 20.0% |
| !! | CTTCAAAATAGATTAAGTTA+TGG | - | chr7_4:34647825-34647844 | Msa1150810:CDS | 20.0% |
| !! | ATACAAATATGAGTTAGAAA+AGG | - | chr7_4:34646350-34646369 | Msa1150810:CDS | 20.0% |
| !! | TACAAATATGAGTTAGAAAA+GGG | - | chr7_4:34646351-34646370 | Msa1150810:CDS | 20.0% |
| !!! | TCACTTTTAAAGTGTATAAA+TGG | - | chr7_4:34646654-34646673 | Msa1150810:CDS | 20.0% |
| !!! | CACTTTTAAAGTGTATAAAT+GGG | - | chr7_4:34646655-34646674 | Msa1150810:CDS | 20.0% |
| !!! | ACTTTTAAAGTGTATAAATG+GGG | - | chr7_4:34646656-34646675 | Msa1150810:CDS | 20.0% |
| !!! | TAAAATATTTCAAAAGCATG+TGG | - | chr7_4:34646789-34646808 | Msa1150810:intron | 20.0% |
| !!! | ACACTGGTTTTAAAAAATTA+AGG | + | chr7_4:34647465-34647484 | None:intergenic | 20.0% |
| !! | CTTCAAAATAGATTAAGTTA+TGG | - | chr7_4:34647825-34647844 | Msa1150810:CDS | 20.0% |
| !! | TATACTCAAACAACTGTTTT+TGG | + | chr7_4:34646219-34646238 | None:intergenic | 25.0% |
| ! | TTATCATTATGAACTAACAC+AGG | + | chr7_4:34646429-34646448 | None:intergenic | 25.0% |
| ! | TGTATATTATATGCAGAGAT+CGG | + | chr7_4:34646699-34646718 | None:intergenic | 25.0% |
| !!! | ATGTATTGTTTTTCTCTATG+CGG | + | chr7_4:34646866-34646885 | None:intergenic | 25.0% |
| ! | ATAGAGAAAAACAATACATG+TGG | - | chr7_4:34646867-34646886 | Msa1150810:intron | 25.0% |
| ! | TTATTCAACAAAACGAGTAA+CGG | - | chr7_4:34647228-34647247 | Msa1150810:intron | 25.0% |
| ! | ATGACTATTATATATGCATG+TGG | - | chr7_4:34647251-34647270 | Msa1150810:intron | 25.0% |
| !! | TGAAATATAATGACTTGTGA+CGG | + | chr7_4:34647300-34647319 | None:intergenic | 25.0% |
| ! | TTACATACTTAGGGAATTTA+AGG | - | chr7_4:34647850-34647869 | Msa1150810:CDS | 25.0% |
| ! | AAATTAGATATATGCAACCT+AGG | - | chr7_4:34647909-34647928 | Msa1150810:CDS | 25.0% |
| !!! | ATGTTATTTTCATGGGAATA+AGG | + | chr7_4:34648002-34648021 | None:intergenic | 25.0% |
| !! | TATACTCAAACAACTGTTTT+TGG | + | chr7_4:34646219-34646238 | None:intergenic | 25.0% |
| ! | TTATCATTATGAACTAACAC+AGG | + | chr7_4:34646429-34646448 | None:intergenic | 25.0% |
| ! | TGTATATTATATGCAGAGAT+CGG | + | chr7_4:34646699-34646718 | None:intergenic | 25.0% |
| !!! | ATGTATTGTTTTTCTCTATG+CGG | + | chr7_4:34646866-34646885 | None:intergenic | 25.0% |
| ! | ATAGAGAAAAACAATACATG+TGG | - | chr7_4:34646867-34646886 | Msa1150810:intron | 25.0% |
| ! | TTATTCAACAAAACGAGTAA+CGG | - | chr7_4:34647228-34647247 | Msa1150810:intron | 25.0% |
| ! | ATGACTATTATATATGCATG+TGG | - | chr7_4:34647251-34647270 | Msa1150810:intron | 25.0% |
| !! | TGAAATATAATGACTTGTGA+CGG | + | chr7_4:34647300-34647319 | None:intergenic | 25.0% |
| ! | TTACATACTTAGGGAATTTA+AGG | - | chr7_4:34647850-34647869 | Msa1150810:CDS | 25.0% |
| ! | AAATTAGATATATGCAACCT+AGG | - | chr7_4:34647909-34647928 | Msa1150810:CDS | 25.0% |
| !!! | ATGTTATTTTCATGGGAATA+AGG | + | chr7_4:34648002-34648021 | None:intergenic | 25.0% |
| ! | ATAGAATTGAAGCACTAAGA+TGG | - | chr7_4:34646236-34646255 | Msa1150810:three_prime_UTR | 30.0% |
| AAATATGAGTTAGAAAAGGG+AGG | - | chr7_4:34646354-34646373 | Msa1150810:CDS | 30.0% | |
| AATATGAGTTAGAAAAGGGA+GGG | - | chr7_4:34646355-34646374 | Msa1150810:CDS | 30.0% | |
| ATACAACCCTGTTTATAAGA+AGG | - | chr7_4:34646401-34646420 | Msa1150810:CDS | 30.0% | |
| !! | CAATATTGGATTTTGTTTCC+AGG | + | chr7_4:34646496-34646515 | None:intergenic | 30.0% |
| TACCTTATCATCTATGAACT+TGG | + | chr7_4:34646559-34646578 | None:intergenic | 30.0% | |
| ! | ATATTTCAAAAGCATGTGGA+TGG | - | chr7_4:34646793-34646812 | Msa1150810:intron | 30.0% |
| AAATACCACAAACTTCACTA+AGG | - | chr7_4:34646912-34646931 | Msa1150810:intron | 30.0% | |
| AATACCACAAACTTCACTAA+GGG | - | chr7_4:34646913-34646932 | Msa1150810:intron | 30.0% | |
| AATTCTTGAGAATGAGCTTA+AGG | - | chr7_4:34647568-34647587 | Msa1150810:intron | 30.0% | |
| GAGCTTAAGGATAATTTCTT+TGG | - | chr7_4:34647581-34647600 | Msa1150810:intron | 30.0% | |
| CTTAAGGATAATTTCTTTGG+TGG | - | chr7_4:34647584-34647603 | Msa1150810:intron | 30.0% | |
| ! | TTTGTTGCTTCTTGTACAAT+GGG | + | chr7_4:34647662-34647681 | None:intergenic | 30.0% |
| AATTTCCCAAGCTTTACAAA+TGG | - | chr7_4:34647705-34647724 | Msa1150810:CDS | 30.0% | |
| ATTTATCCTTAACAACTGGA+TGG | + | chr7_4:34647748-34647767 | None:intergenic | 30.0% | |
| !! | AGTTATGGTGTTACATACTT+AGG | - | chr7_4:34647840-34647859 | Msa1150810:CDS | 30.0% |
| !! | GTTATGGTGTTACATACTTA+GGG | - | chr7_4:34647841-34647860 | Msa1150810:CDS | 30.0% |
| TTTAAACAGTGAGAAATCCT+AGG | + | chr7_4:34647929-34647948 | None:intergenic | 30.0% | |
| TCTCACTGTTTAAAAAGTCT+AGG | - | chr7_4:34647935-34647954 | Msa1150810:five_prime_UTR | 30.0% | |
| !!! | TGATGGCATGTTATTTTCAT+GGG | + | chr7_4:34648009-34648028 | None:intergenic | 30.0% |
| ! | ATAGAATTGAAGCACTAAGA+TGG | - | chr7_4:34646236-34646255 | Msa1150810:three_prime_UTR | 30.0% |
| AAATATGAGTTAGAAAAGGG+AGG | - | chr7_4:34646354-34646373 | Msa1150810:CDS | 30.0% | |
| AATATGAGTTAGAAAAGGGA+GGG | - | chr7_4:34646355-34646374 | Msa1150810:CDS | 30.0% | |
| ATACAACCCTGTTTATAAGA+AGG | - | chr7_4:34646401-34646420 | Msa1150810:CDS | 30.0% | |
| !! | CAATATTGGATTTTGTTTCC+AGG | + | chr7_4:34646496-34646515 | None:intergenic | 30.0% |
| TACCTTATCATCTATGAACT+TGG | + | chr7_4:34646559-34646578 | None:intergenic | 30.0% | |
| ! | ATATTTCAAAAGCATGTGGA+TGG | - | chr7_4:34646793-34646812 | Msa1150810:intron | 30.0% |
| AAATACCACAAACTTCACTA+AGG | - | chr7_4:34646912-34646931 | Msa1150810:intron | 30.0% | |
| AATACCACAAACTTCACTAA+GGG | - | chr7_4:34646913-34646932 | Msa1150810:intron | 30.0% | |
| AATTCTTGAGAATGAGCTTA+AGG | - | chr7_4:34647568-34647587 | Msa1150810:intron | 30.0% | |
| GAGCTTAAGGATAATTTCTT+TGG | - | chr7_4:34647581-34647600 | Msa1150810:intron | 30.0% | |
| CTTAAGGATAATTTCTTTGG+TGG | - | chr7_4:34647584-34647603 | Msa1150810:intron | 30.0% | |
| ! | TTTGTTGCTTCTTGTACAAT+GGG | + | chr7_4:34647662-34647681 | None:intergenic | 30.0% |
| AATTTCCCAAGCTTTACAAA+TGG | - | chr7_4:34647705-34647724 | Msa1150810:CDS | 30.0% | |
| ATTTATCCTTAACAACTGGA+TGG | + | chr7_4:34647748-34647767 | None:intergenic | 30.0% | |
| !! | AGTTATGGTGTTACATACTT+AGG | - | chr7_4:34647840-34647859 | Msa1150810:CDS | 30.0% |
| !! | GTTATGGTGTTACATACTTA+GGG | - | chr7_4:34647841-34647860 | Msa1150810:CDS | 30.0% |
| TTTAAACAGTGAGAAATCCT+AGG | + | chr7_4:34647929-34647948 | None:intergenic | 30.0% | |
| TCTCACTGTTTAAAAAGTCT+AGG | - | chr7_4:34647935-34647954 | Msa1150810:five_prime_UTR | 30.0% | |
| !!! | TGATGGCATGTTATTTTCAT+GGG | + | chr7_4:34648009-34648028 | None:intergenic | 30.0% |
| CTACTTCTATATATAGAGCC+AGG | + | chr7_4:34646170-34646189 | None:intergenic | 35.0% | |
| ! | CAGGAAAATGTGAAGCTTTT+TGG | - | chr7_4:34646267-34646286 | Msa1150810:three_prime_UTR | 35.0% |
| !!! | TGTGAAGCTTTTTGGAATGA+TGG | - | chr7_4:34646275-34646294 | Msa1150810:three_prime_UTR | 35.0% |
| GAGATTGCTCTAACATTGAA+GGG | - | chr7_4:34646321-34646340 | Msa1150810:three_prime_UTR | 35.0% | |
| CAGGAACCTTCTTATAAACA+GGG | + | chr7_4:34646410-34646429 | None:intergenic | 35.0% | |
| ACAGGAACCTTCTTATAAAC+AGG | + | chr7_4:34646411-34646430 | None:intergenic | 35.0% | |
| ATCACAAGGGATTCTGATAT+AGG | + | chr7_4:34646453-34646472 | None:intergenic | 35.0% | |
| GACATACTCAAGAATCACAA+GGG | + | chr7_4:34646466-34646485 | None:intergenic | 35.0% | |
| TAAGGATCAGAAGGCAATAT+TGG | + | chr7_4:34646510-34646529 | None:intergenic | 35.0% | |
| GACCAAGTTCATAGATGATA+AGG | - | chr7_4:34646554-34646573 | Msa1150810:CDS | 35.0% | |
| GAATTACGTTCATGTGATCT+CGG | + | chr7_4:34646740-34646759 | None:intergenic | 35.0% | |
| ATACGCTAGAGAGACATTTA+GGG | + | chr7_4:34647176-34647195 | None:intergenic | 35.0% | |
| TATACGCTAGAGAGACATTT+AGG | + | chr7_4:34647177-34647196 | None:intergenic | 35.0% | |
| !! | TATAATGACTTGTGACGGAT+TGG | + | chr7_4:34647295-34647314 | None:intergenic | 35.0% |
| ! | TTGTTGCTTCTTGTACAATG+GGG | + | chr7_4:34647661-34647680 | None:intergenic | 35.0% |
| ! | GTTTGTTGCTTCTTGTACAA+TGG | + | chr7_4:34647663-34647682 | None:intergenic | 35.0% |
| TGACTCCATTTGTAAAGCTT+GGG | + | chr7_4:34647713-34647732 | None:intergenic | 35.0% | |
| TTGACTCCATTTGTAAAGCT+TGG | + | chr7_4:34647714-34647733 | None:intergenic | 35.0% | |
| GGCAATTTATCCTTAACAAC+TGG | + | chr7_4:34647752-34647771 | None:intergenic | 35.0% | |
| GGAATTTAAGGAGAATTGTC+TGG | - | chr7_4:34647862-34647881 | Msa1150810:CDS | 35.0% | |
| !!! | GTGATGGCATGTTATTTTCA+TGG | + | chr7_4:34648010-34648029 | None:intergenic | 35.0% |
| CTACTTCTATATATAGAGCC+AGG | + | chr7_4:34646170-34646189 | None:intergenic | 35.0% | |
| ! | CAGGAAAATGTGAAGCTTTT+TGG | - | chr7_4:34646267-34646286 | Msa1150810:three_prime_UTR | 35.0% |
| !!! | TGTGAAGCTTTTTGGAATGA+TGG | - | chr7_4:34646275-34646294 | Msa1150810:three_prime_UTR | 35.0% |
| GAGATTGCTCTAACATTGAA+GGG | - | chr7_4:34646321-34646340 | Msa1150810:three_prime_UTR | 35.0% | |
| CAGGAACCTTCTTATAAACA+GGG | + | chr7_4:34646410-34646429 | None:intergenic | 35.0% | |
| ACAGGAACCTTCTTATAAAC+AGG | + | chr7_4:34646411-34646430 | None:intergenic | 35.0% | |
| ATCACAAGGGATTCTGATAT+AGG | + | chr7_4:34646453-34646472 | None:intergenic | 35.0% | |
| GACATACTCAAGAATCACAA+GGG | + | chr7_4:34646466-34646485 | None:intergenic | 35.0% | |
| TAAGGATCAGAAGGCAATAT+TGG | + | chr7_4:34646510-34646529 | None:intergenic | 35.0% | |
| GACCAAGTTCATAGATGATA+AGG | - | chr7_4:34646554-34646573 | Msa1150810:CDS | 35.0% | |
| GAATTACGTTCATGTGATCT+CGG | + | chr7_4:34646740-34646759 | None:intergenic | 35.0% | |
| ATACGCTAGAGAGACATTTA+GGG | + | chr7_4:34647176-34647195 | None:intergenic | 35.0% | |
| TATACGCTAGAGAGACATTT+AGG | + | chr7_4:34647177-34647196 | None:intergenic | 35.0% | |
| !! | TATAATGACTTGTGACGGAT+TGG | + | chr7_4:34647295-34647314 | None:intergenic | 35.0% |
| ! | TTGTTGCTTCTTGTACAATG+GGG | + | chr7_4:34647661-34647680 | None:intergenic | 35.0% |
| ! | GTTTGTTGCTTCTTGTACAA+TGG | + | chr7_4:34647663-34647682 | None:intergenic | 35.0% |
| TGACTCCATTTGTAAAGCTT+GGG | + | chr7_4:34647713-34647732 | None:intergenic | 35.0% | |
| TTGACTCCATTTGTAAAGCT+TGG | + | chr7_4:34647714-34647733 | None:intergenic | 35.0% | |
| GGCAATTTATCCTTAACAAC+TGG | + | chr7_4:34647752-34647771 | None:intergenic | 35.0% | |
| GGAATTTAAGGAGAATTGTC+TGG | - | chr7_4:34647862-34647881 | Msa1150810:CDS | 35.0% | |
| !!! | GTGATGGCATGTTATTTTCA+TGG | + | chr7_4:34648010-34648029 | None:intergenic | 35.0% |
| CACTAAGATGGCATCAAATC+AGG | - | chr7_4:34646248-34646267 | Msa1150810:three_prime_UTR | 40.0% | |
| GGAGATTGCTCTAACATTGA+AGG | - | chr7_4:34646320-34646339 | Msa1150810:three_prime_UTR | 40.0% | |
| CGACATACTCAAGAATCACA+AGG | + | chr7_4:34646467-34646486 | None:intergenic | 40.0% | |
| ! | GCTCTTTTGTAAGGATCAGA+AGG | + | chr7_4:34646519-34646538 | None:intergenic | 40.0% |
| TGATCCTTACAAAAGAGCCT+TGG | - | chr7_4:34646521-34646540 | Msa1150810:CDS | 40.0% | |
| ! | TCTTTATTTGTGCGCATGTG+TGG | - | chr7_4:34646765-34646784 | Msa1150810:intron | 40.0% |
| ! | AACTTCACTAAGGGTGTGTT+TGG | - | chr7_4:34646922-34646941 | Msa1150810:intron | 40.0% |
| TGTGTTTGGATGGAAGGTTT+AGG | - | chr7_4:34646936-34646955 | Msa1150810:intron | 40.0% | |
| ! | ATTTGAAGCGGTTCTCAATG+TGG | + | chr7_4:34647201-34647220 | None:intergenic | 40.0% |
| AGAACGTGAGAAAGCTATTG+AGG | - | chr7_4:34647526-34647545 | Msa1150810:intron | 40.0% | |
| GGATAATTTCTTTGGTGGAG+AGG | - | chr7_4:34647589-34647608 | Msa1150810:intron | 40.0% | |
| ! | CTGCAGTCTTCATAGCTTTT+TGG | - | chr7_4:34647633-34647652 | Msa1150810:CDS | 40.0% |
| ATCCTTAACAACTGGATGGT+TGG | + | chr7_4:34647744-34647763 | None:intergenic | 40.0% | |
| GATAAATTGCCTCCTAGAGA+AGG | - | chr7_4:34647761-34647780 | Msa1150810:CDS | 40.0% | |
| TAAGCCAAAAGTCCTTCTCT+AGG | + | chr7_4:34647776-34647795 | None:intergenic | 40.0% | |
| CACTAAGATGGCATCAAATC+AGG | - | chr7_4:34646248-34646267 | Msa1150810:three_prime_UTR | 40.0% | |
| GGAGATTGCTCTAACATTGA+AGG | - | chr7_4:34646320-34646339 | Msa1150810:three_prime_UTR | 40.0% | |
| CGACATACTCAAGAATCACA+AGG | + | chr7_4:34646467-34646486 | None:intergenic | 40.0% | |
| ! | GCTCTTTTGTAAGGATCAGA+AGG | + | chr7_4:34646519-34646538 | None:intergenic | 40.0% |
| TGATCCTTACAAAAGAGCCT+TGG | - | chr7_4:34646521-34646540 | Msa1150810:CDS | 40.0% | |
| ! | TCTTTATTTGTGCGCATGTG+TGG | - | chr7_4:34646765-34646784 | Msa1150810:intron | 40.0% |
| ! | AACTTCACTAAGGGTGTGTT+TGG | - | chr7_4:34646922-34646941 | Msa1150810:intron | 40.0% |
| TGTGTTTGGATGGAAGGTTT+AGG | - | chr7_4:34646936-34646955 | Msa1150810:intron | 40.0% | |
| ! | ATTTGAAGCGGTTCTCAATG+TGG | + | chr7_4:34647201-34647220 | None:intergenic | 40.0% |
| AGAACGTGAGAAAGCTATTG+AGG | - | chr7_4:34647526-34647545 | Msa1150810:intron | 40.0% | |
| GGATAATTTCTTTGGTGGAG+AGG | - | chr7_4:34647589-34647608 | Msa1150810:intron | 40.0% | |
| ! | CTGCAGTCTTCATAGCTTTT+TGG | - | chr7_4:34647633-34647652 | Msa1150810:CDS | 40.0% |
| ATCCTTAACAACTGGATGGT+TGG | + | chr7_4:34647744-34647763 | None:intergenic | 40.0% | |
| GATAAATTGCCTCCTAGAGA+AGG | - | chr7_4:34647761-34647780 | Msa1150810:CDS | 40.0% | |
| TAAGCCAAAAGTCCTTCTCT+AGG | + | chr7_4:34647776-34647795 | None:intergenic | 40.0% | |
| TGGCAAGTCCATTTGTGAGT+AGG | - | chr7_4:34646295-34646314 | Msa1150810:three_prime_UTR | 45.0% | |
| GGCAAGTCCATTTGTGAGTA+GGG | - | chr7_4:34646296-34646315 | Msa1150810:three_prime_UTR | 45.0% | |
| AAGTCCATTTGTGAGTAGGG+TGG | - | chr7_4:34646299-34646318 | Msa1150810:three_prime_UTR | 45.0% | |
| ATCTCCACCCTACTCACAAA+TGG | + | chr7_4:34646306-34646325 | None:intergenic | 45.0% | |
| TTGAGTATGTCGATGAGACC+TGG | - | chr7_4:34646475-34646494 | Msa1150810:CDS | 45.0% | |
| ! | TGATCTCGGTTCAGTTGGTA+GGG | + | chr7_4:34646726-34646745 | None:intergenic | 45.0% |
| TCATGTGATCTCGGTTCAGT+TGG | + | chr7_4:34646731-34646750 | None:intergenic | 45.0% | |
| CACACCCTTAGTGAAGTTTG+TGG | + | chr7_4:34646920-34646939 | None:intergenic | 45.0% | |
| ! | TCACTAAGGGTGTGTTTGGA+TGG | - | chr7_4:34646926-34646945 | Msa1150810:intron | 45.0% |
| ! | TAAGGGTGTGTTTGGATGGA+AGG | - | chr7_4:34646930-34646949 | Msa1150810:intron | 45.0% |
| TTGGATGGAAGGTTTAGGAG+TGG | - | chr7_4:34646941-34646960 | Msa1150810:intron | 45.0% | |
| ATGGAAGGTTTAGGAGTGGA+AGG | - | chr7_4:34646945-34646964 | Msa1150810:intron | 45.0% | |
| TGGAAGGTTTAGGAGTGGAA+GGG | - | chr7_4:34646946-34646965 | Msa1150810:intron | 45.0% | |
| TTGGATTGAGGGTTTAGGAG+GGG | + | chr7_4:34647148-34647167 | None:intergenic | 45.0% | |
| CTTGGATTGAGGGTTTAGGA+GGG | + | chr7_4:34647149-34647168 | None:intergenic | 45.0% | |
| TGTGCTTGGATTGAGGGTTT+AGG | + | chr7_4:34647153-34647172 | None:intergenic | 45.0% | |
| TTAGGGTGTGCTTGGATTGA+GGG | + | chr7_4:34647159-34647178 | None:intergenic | 45.0% | |
| ! | TTTAGGGTGTGCTTGGATTG+AGG | + | chr7_4:34647160-34647179 | None:intergenic | 45.0% |
| ! | AGAGACATTTAGGGTGTGCT+TGG | + | chr7_4:34647167-34647186 | None:intergenic | 45.0% |
| ! | ACCAGTGTTTAAGTGCTGCA+CGG | - | chr7_4:34647477-34647496 | Msa1150810:intron | 45.0% |
| TTCTTTGGTGGAGAGGAGAT+TGG | - | chr7_4:34647596-34647615 | Msa1150810:intron | 45.0% | |
| CACCAACCATCCAGTTGTTA+AGG | - | chr7_4:34647739-34647758 | Msa1150810:CDS | 45.0% | |
| TGGCAAGTCCATTTGTGAGT+AGG | - | chr7_4:34646295-34646314 | Msa1150810:three_prime_UTR | 45.0% | |
| GGCAAGTCCATTTGTGAGTA+GGG | - | chr7_4:34646296-34646315 | Msa1150810:three_prime_UTR | 45.0% | |
| AAGTCCATTTGTGAGTAGGG+TGG | - | chr7_4:34646299-34646318 | Msa1150810:three_prime_UTR | 45.0% | |
| ATCTCCACCCTACTCACAAA+TGG | + | chr7_4:34646306-34646325 | None:intergenic | 45.0% | |
| TTGAGTATGTCGATGAGACC+TGG | - | chr7_4:34646475-34646494 | Msa1150810:CDS | 45.0% | |
| ! | TGATCTCGGTTCAGTTGGTA+GGG | + | chr7_4:34646726-34646745 | None:intergenic | 45.0% |
| TCATGTGATCTCGGTTCAGT+TGG | + | chr7_4:34646731-34646750 | None:intergenic | 45.0% | |
| CACACCCTTAGTGAAGTTTG+TGG | + | chr7_4:34646920-34646939 | None:intergenic | 45.0% | |
| ! | TCACTAAGGGTGTGTTTGGA+TGG | - | chr7_4:34646926-34646945 | Msa1150810:intron | 45.0% |
| ! | TAAGGGTGTGTTTGGATGGA+AGG | - | chr7_4:34646930-34646949 | Msa1150810:intron | 45.0% |
| TTGGATGGAAGGTTTAGGAG+TGG | - | chr7_4:34646941-34646960 | Msa1150810:intron | 45.0% | |
| ATGGAAGGTTTAGGAGTGGA+AGG | - | chr7_4:34646945-34646964 | Msa1150810:intron | 45.0% | |
| TGGAAGGTTTAGGAGTGGAA+GGG | - | chr7_4:34646946-34646965 | Msa1150810:intron | 45.0% | |
| TTGGATTGAGGGTTTAGGAG+GGG | + | chr7_4:34647148-34647167 | None:intergenic | 45.0% | |
| CTTGGATTGAGGGTTTAGGA+GGG | + | chr7_4:34647149-34647168 | None:intergenic | 45.0% | |
| TGTGCTTGGATTGAGGGTTT+AGG | + | chr7_4:34647153-34647172 | None:intergenic | 45.0% | |
| TTAGGGTGTGCTTGGATTGA+GGG | + | chr7_4:34647159-34647178 | None:intergenic | 45.0% | |
| ! | TTTAGGGTGTGCTTGGATTG+AGG | + | chr7_4:34647160-34647179 | None:intergenic | 45.0% |
| ! | AGAGACATTTAGGGTGTGCT+TGG | + | chr7_4:34647167-34647186 | None:intergenic | 45.0% |
| ! | ACCAGTGTTTAAGTGCTGCA+CGG | - | chr7_4:34647477-34647496 | Msa1150810:intron | 45.0% |
| TTCTTTGGTGGAGAGGAGAT+TGG | - | chr7_4:34647596-34647615 | Msa1150810:intron | 45.0% | |
| CACCAACCATCCAGTTGTTA+AGG | - | chr7_4:34647739-34647758 | Msa1150810:CDS | 45.0% | |
| ! | CGAGCCAAGGCTCTTTTGTA+AGG | + | chr7_4:34646528-34646547 | None:intergenic | 50.0% |
| ! | AAAGAGCCTTGGCTCGTTTC+TGG | - | chr7_4:34646532-34646551 | Msa1150810:CDS | 50.0% |
| GTGATCTCGGTTCAGTTGGT+AGG | + | chr7_4:34646727-34646746 | None:intergenic | 50.0% | |
| TTAGGAGTGGAAGGGAGATG+AGG | - | chr7_4:34646954-34646973 | Msa1150810:intron | 50.0% | |
| TAGGAGTGGAAGGGAGATGA+GGG | - | chr7_4:34646955-34646974 | Msa1150810:intron | 50.0% | |
| GCTTGGATTGAGGGTTTAGG+AGG | + | chr7_4:34647150-34647169 | None:intergenic | 50.0% | |
| TCCGTGCAGCACTTAAACAC+TGG | + | chr7_4:34647481-34647500 | None:intergenic | 50.0% | |
| ! | GCCTCCTAGAGAAGGACTTT+TGG | - | chr7_4:34647769-34647788 | Msa1150810:CDS | 50.0% |
| GCCAAAAGTCCTTCTCTAGG+AGG | + | chr7_4:34647773-34647792 | None:intergenic | 50.0% | |
| ! | CGAGCCAAGGCTCTTTTGTA+AGG | + | chr7_4:34646528-34646547 | None:intergenic | 50.0% |
| ! | AAAGAGCCTTGGCTCGTTTC+TGG | - | chr7_4:34646532-34646551 | Msa1150810:CDS | 50.0% |
| GTGATCTCGGTTCAGTTGGT+AGG | + | chr7_4:34646727-34646746 | None:intergenic | 50.0% | |
| TTAGGAGTGGAAGGGAGATG+AGG | - | chr7_4:34646954-34646973 | Msa1150810:intron | 50.0% | |
| TAGGAGTGGAAGGGAGATGA+GGG | - | chr7_4:34646955-34646974 | Msa1150810:intron | 50.0% | |
| GCTTGGATTGAGGGTTTAGG+AGG | + | chr7_4:34647150-34647169 | None:intergenic | 50.0% | |
| TCCGTGCAGCACTTAAACAC+TGG | + | chr7_4:34647481-34647500 | None:intergenic | 50.0% | |
| ! | GCCTCCTAGAGAAGGACTTT+TGG | - | chr7_4:34647769-34647788 | Msa1150810:CDS | 50.0% |
| GCCAAAAGTCCTTCTCTAGG+AGG | + | chr7_4:34647773-34647792 | None:intergenic | 50.0% | |
| CTTGGTCCAGAAACGAGCCA+AGG | + | chr7_4:34646541-34646560 | None:intergenic | 55.0% | |
| TTGAGGGTTTAGGAGGGGCA+GGG | + | chr7_4:34647143-34647162 | None:intergenic | 55.0% | |
| ATTGAGGGTTTAGGAGGGGC+AGG | + | chr7_4:34647144-34647163 | None:intergenic | 55.0% | |
| CTTGGTCCAGAAACGAGCCA+AGG | + | chr7_4:34646541-34646560 | None:intergenic | 55.0% | |
| TTGAGGGTTTAGGAGGGGCA+GGG | + | chr7_4:34647143-34647162 | None:intergenic | 55.0% | |
| ATTGAGGGTTTAGGAGGGGC+AGG | + | chr7_4:34647144-34647163 | None:intergenic | 55.0% | |
| TAGGAGGGGCAGGGAGAGGA+GGG | + | chr7_4:34647134-34647153 | None:intergenic | 65.0% | |
| TTAGGAGGGGCAGGGAGAGG+AGG | + | chr7_4:34647135-34647154 | None:intergenic | 65.0% | |
| GGTTTAGGAGGGGCAGGGAG+AGG | + | chr7_4:34647138-34647157 | None:intergenic | 65.0% | |
| TAGGAGGGGCAGGGAGAGGA+GGG | + | chr7_4:34647134-34647153 | None:intergenic | 65.0% | |
| TTAGGAGGGGCAGGGAGAGG+AGG | + | chr7_4:34647135-34647154 | None:intergenic | 65.0% | |
| GGTTTAGGAGGGGCAGGGAG+AGG | + | chr7_4:34647138-34647157 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 34646155 | 34648029 | 34646155 | ID=Msa1150810;Name=Msa1150810 |
| chr7_4 | mRNA | 34646155 | 34648029 | 34646155 | ID=Msa1150810-mRNA-1;Parent=Msa1150810;Name=Msa1150810-mRNA-1;_AED=0.00;_eAED=0.00;_QI=100|1|1|1|1|1|2|194|224 |
| chr7_4 | exon | 34646155 | 34646702 | 34646155 | ID=Msa1150810-mRNA-1:exon:8208;Parent=Msa1150810-mRNA-1 |
| chr7_4 | exon | 34647609 | 34648029 | 34647609 | ID=Msa1150810-mRNA-1:exon:8207;Parent=Msa1150810-mRNA-1 |
| chr7_4 | five_prime_UTR | 34647930 | 34648029 | 34647930 | ID=Msa1150810-mRNA-1:five_prime_utr;Parent=Msa1150810-mRNA-1 |
| chr7_4 | CDS | 34647609 | 34647929 | 34647609 | ID=Msa1150810-mRNA-1:cds;Parent=Msa1150810-mRNA-1 |
| chr7_4 | CDS | 34646349 | 34646702 | 34646349 | ID=Msa1150810-mRNA-1:cds;Parent=Msa1150810-mRNA-1 |
| chr7_4 | three_prime_UTR | 34646155 | 34646348 | 34646155 | ID=Msa1150810-mRNA-1:three_prime_utr;Parent=Msa1150810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
