Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0625630 | XP_013454549.2 | 97.510 | 522 | 10 | 2 | 1 | 521 | 1 | 520 | 0.0 | 1038 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0625630 | sp|Q8S9J6|ASPA_ARATH | 43.467 | 398 | 207 | 10 | 129 | 519 | 88 | 474 | 4.95e-96 | 302 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0625630 | A0A396I0Y2 | 97.510 | 522 | 10 | 2 | 1 | 521 | 1 | 520 | 0.0 | 1038 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025630 | Msa0625630 | 0.807782 | 4.271775e-50 | -8.615850e-47 |
| Msa0036850 | Msa0625630 | 0.817927 | 2.557918e-52 | -8.615850e-47 |
| Msa0042610 | Msa0625630 | 0.800586 | 1.344489e-48 | -8.615850e-47 |
| Msa0081520 | Msa0625630 | 0.819918 | 9.023216e-53 | -8.615850e-47 |
| Msa0090400 | Msa0625630 | 0.809585 | 1.759137e-50 | -8.615850e-47 |
| Msa0095900 | Msa0625630 | 0.823105 | 1.657100e-53 | -8.615850e-47 |
| Msa0115160 | Msa0625630 | 0.813307 | 2.735006e-51 | -8.615850e-47 |
| Msa0118570 | Msa0625630 | 0.812794 | 3.543234e-51 | -8.615850e-47 |
| Msa0625630 | Msa0626450 | 0.851846 | 6.800087e-61 | -8.615850e-47 |
| Msa0625630 | Msa0626490 | 0.851001 | 1.179215e-60 | -8.615850e-47 |
| Msa0625630 | Msa0637560 | 0.832108 | 1.140977e-55 | -8.615850e-47 |
| Msa0625630 | Msa0637580 | 0.830772 | 2.432515e-55 | -8.615850e-47 |
| Msa0625630 | Msa0638480 | 0.803361 | 3.616110e-49 | -8.615850e-47 |
| Msa0625630 | Msa0643300 | 0.825801 | 3.844622e-54 | -8.615850e-47 |
| Msa0625630 | Msa0663300 | 0.947647 | 4.479544e-106 | -8.615850e-47 |
| Msa0625630 | Msa0664060 | 0.945508 | 2.675943e-104 | -8.615850e-47 |
| Msa0625630 | Msa0664600 | 0.851163 | 1.061610e-60 | -8.615850e-47 |
| Msa0625630 | Msa0679870 | 0.812158 | 4.879907e-51 | -8.615850e-47 |
| Msa0625630 | Msa0683570 | 0.831855 | 1.317568e-55 | -8.615850e-47 |
| Msa0625630 | Msa0683740 | 0.814817 | 1.270240e-51 | -8.615850e-47 |
| Msa0625630 | Msa0725000 | 0.804355 | 2.247962e-49 | -8.615850e-47 |
| Msa0625630 | Msa0749740 | 0.811199 | 7.888289e-51 | -8.615850e-47 |
| Msa0625630 | Msa0750090 | 0.808374 | 3.196677e-50 | -8.615850e-47 |
| Msa0625630 | Msa0754520 | 0.821432 | 4.049764e-53 | -8.615850e-47 |
| Msa0625630 | Msa0759650 | 0.830741 | 2.476358e-55 | -8.615850e-47 |
| Msa0625630 | Msa0795870 | 0.812300 | 4.545151e-51 | -8.615850e-47 |
| Msa0625630 | Msa0801210 | 0.823452 | 1.374632e-53 | -8.615850e-47 |
| Msa0625630 | Msa0833220 | 0.826169 | 3.143271e-54 | -8.615850e-47 |
| Msa0625630 | Msa0833650 | 0.802368 | 5.798230e-49 | -8.615850e-47 |
| Msa0625630 | Msa0839560 | 0.812706 | 3.704044e-51 | -8.615850e-47 |
| Msa0625630 | Msa0845110 | 0.801529 | 8.626757e-49 | -8.615850e-47 |
| Msa0625630 | Msa0856050 | 0.813296 | 2.749680e-51 | -8.615850e-47 |
| Msa0625630 | Msa0861510 | 0.820790 | 5.693686e-53 | -8.615850e-47 |
| Msa0625630 | Msa0861530 | 0.804163 | 2.465268e-49 | -8.615850e-47 |
| Msa0625630 | Msa0861600 | 0.826003 | 3.443123e-54 | -8.615850e-47 |
| Msa0625630 | Msa0896540 | 0.802230 | 6.192481e-49 | -8.615850e-47 |
| Msa0625630 | Msa0930780 | 0.817966 | 2.506175e-52 | -8.615850e-47 |
| Msa0625630 | Msa0945110 | 0.814683 | 1.359640e-51 | -8.615850e-47 |
| Msa0625630 | Msa0981320 | 0.843641 | 1.236621e-58 | -8.615850e-47 |
| Msa0625630 | Msa1003800 | 0.804948 | 1.690311e-49 | -8.615850e-47 |
| Msa0625630 | Msa1018690 | 0.817490 | 3.210583e-52 | -8.615850e-47 |
| Msa0625630 | Msa1030980 | 0.818555 | 1.844029e-52 | -8.615850e-47 |
| Msa0625630 | Msa1030990 | 0.835869 | 1.305469e-56 | -8.615850e-47 |
| Msa0625630 | Msa1031040 | 0.821133 | 4.747130e-53 | -8.615850e-47 |
| Msa0625630 | Msa1031050 | 0.800518 | 1.388089e-48 | -8.615850e-47 |
| Msa0625630 | Msa1045140 | 0.813984 | 1.940864e-51 | -8.615850e-47 |
| Msa0625630 | Msa1048920 | 0.812060 | 5.127110e-51 | -8.615850e-47 |
| Msa0625630 | Msa1084950 | 0.800961 | 1.127112e-48 | -8.615850e-47 |
| Msa0625630 | Msa1113340 | 0.867346 | 1.464205e-65 | -8.615850e-47 |
| Msa0625630 | Msa1132840 | 0.806780 | 6.964542e-50 | -8.615850e-47 |
| Msa0625630 | Msa1135270 | 0.809565 | 1.777434e-50 | -8.615850e-47 |
| Msa0625630 | Msa1151910 | 0.800718 | 1.263678e-48 | -8.615850e-47 |
| Msa0625630 | Msa1173330 | 0.818587 | 1.813623e-52 | -8.615850e-47 |
| Msa0625630 | Msa1196450 | 0.804722 | 1.885069e-49 | -8.615850e-47 |
| Msa0625630 | Msa1200370 | 0.826256 | 2.998195e-54 | -8.615850e-47 |
| Msa0625630 | Msa1202190 | 0.815374 | 9.554427e-52 | -8.615850e-47 |
| Msa0625630 | Msa1208430 | 0.804767 | 1.844318e-49 | -8.615850e-47 |
| Msa0625630 | Msa1208950 | 0.803407 | 3.538701e-49 | -8.615850e-47 |
| Msa0625630 | Msa1223470 | 0.806423 | 8.285861e-50 | -8.615850e-47 |
| Msa0625630 | Msa1232710 | 0.847361 | 1.214289e-59 | -8.615850e-47 |
| Msa0625630 | Msa1252190 | 0.804782 | 1.830739e-49 | -8.615850e-47 |
| Msa0625630 | Msa1253310 | 0.825166 | 5.435494e-54 | -8.615850e-47 |
| Msa0625630 | Msa1269480 | 0.813174 | 2.925551e-51 | -8.615850e-47 |
| Msa0625630 | Msa1276660 | 0.801683 | 8.021047e-49 | -8.615850e-47 |
| Msa0625630 | Msa1292830 | 0.802102 | 6.579338e-49 | -8.615850e-47 |
| Msa0625630 | Msa1307570 | 0.833879 | 4.138411e-56 | -8.615850e-47 |
| Msa0625630 | Msa1313300 | 0.850378 | 1.765037e-60 | -8.615850e-47 |
| Msa0625630 | Msa1336120 | 0.803382 | 3.580517e-49 | -8.615850e-47 |
| Msa0625630 | Msa1348090 | 0.807847 | 4.137920e-50 | -8.615850e-47 |
| Msa0625630 | Msa1356830 | 0.803345 | 3.644020e-49 | -8.615850e-47 |
| Msa0625630 | Msa1369150 | 0.820837 | 5.552591e-53 | -8.615850e-47 |
| Msa0625630 | Msa1412350 | 0.827854 | 1.243260e-54 | -8.615850e-47 |
| Msa0625630 | Msa1422420 | 0.812732 | 3.656001e-51 | -8.615850e-47 |
| Msa0625630 | Msa1432950 | 0.816871 | 4.423500e-52 | -8.615850e-47 |
| Msa0625630 | Msa1437940 | 0.804334 | 2.270920e-49 | -8.615850e-47 |
| Msa0625630 | Msa1440960 | 0.858540 | 7.683446e-63 | -8.615850e-47 |
| Msa0625630 | Msa1445190 | 0.827179 | 1.804940e-54 | -8.615850e-47 |
| Msa0625630 | Msa1446810 | 0.816028 | 6.827705e-52 | -8.615850e-47 |
| Msa0625630 | Msa1459380 | 0.843516 | 1.335390e-58 | -8.615850e-47 |
| Msa0131900 | Msa0625630 | 0.815501 | 8.952245e-52 | -8.615850e-47 |
| Msa0134610 | Msa0625630 | 0.816329 | 5.849629e-52 | -8.615850e-47 |
| Msa0136650 | Msa0625630 | 0.846213 | 2.500846e-59 | -8.615850e-47 |
| Msa0137880 | Msa0625630 | 0.809492 | 1.842392e-50 | -8.615850e-47 |
| Msa0144360 | Msa0625630 | 0.811887 | 5.592182e-51 | -8.615850e-47 |
| Msa0152400 | Msa0625630 | 0.807649 | 4.558353e-50 | -8.615850e-47 |
| Msa0173890 | Msa0625630 | 0.805333 | 1.404305e-49 | -8.615850e-47 |
| Msa0174450 | Msa0625630 | 0.811158 | 8.051728e-51 | -8.615850e-47 |
| Msa0180930 | Msa0625630 | 0.801644 | 8.169950e-49 | -8.615850e-47 |
| Msa0197420 | Msa0625630 | 0.828573 | 8.338849e-55 | -8.615850e-47 |
| Msa0205840 | Msa0625630 | 0.810997 | 8.724743e-51 | -8.615850e-47 |
| Msa0213280 | Msa0625630 | 0.812891 | 3.374608e-51 | -8.615850e-47 |
| Msa0222560 | Msa0625630 | 0.840148 | 1.035537e-57 | -8.615850e-47 |
| Msa0225460 | Msa0625630 | 0.839379 | 1.641233e-57 | -8.615850e-47 |
| Msa0225680 | Msa0625630 | 0.838301 | 3.120051e-57 | -8.615850e-47 |
| Msa0378720 | Msa0625630 | 0.811268 | 7.621583e-51 | -8.615850e-47 |
| Msa0380620 | Msa0625630 | 0.841750 | 3.932109e-58 | -8.615850e-47 |
| Msa0390970 | Msa0625630 | 0.840851 | 6.776525e-58 | -8.615850e-47 |
| Msa0410500 | Msa0625630 | 0.812587 | 3.933699e-51 | -8.615850e-47 |
| Msa0417880 | Msa0625630 | 0.816504 | 5.344348e-52 | -8.615850e-47 |
| Msa0422850 | Msa0625630 | 0.809376 | 1.950734e-50 | -8.615850e-47 |
| Msa0422930 | Msa0625630 | 0.807752 | 4.335734e-50 | -8.615850e-47 |
| Msa0428150 | Msa0625630 | 0.801380 | 9.255523e-49 | -8.615850e-47 |
| Msa0428370 | Msa0625630 | 0.809522 | 1.815386e-50 | -8.615850e-47 |
| Msa0430260 | Msa0625630 | 0.849235 | 3.682065e-60 | -8.615850e-47 |
| Msa0447370 | Msa0625630 | 0.807259 | 5.517089e-50 | -8.615850e-47 |
| Msa0462500 | Msa0625630 | 0.811324 | 7.412704e-51 | -8.615850e-47 |
| Msa0465530 | Msa0625630 | 0.813844 | 2.083475e-51 | -8.615850e-47 |
| Msa0467430 | Msa0625630 | 0.821987 | 3.013602e-53 | -8.615850e-47 |
| Msa0474730 | Msa0625630 | 0.820891 | 5.397413e-53 | -8.615850e-47 |
| Msa0475790 | Msa0625630 | 0.829827 | 4.140621e-55 | -8.615850e-47 |
| Msa0239190 | Msa0625630 | 0.813939 | 1.985607e-51 | -8.615850e-47 |
| Msa0239570 | Msa0625630 | 0.801212 | 1.001585e-48 | -8.615850e-47 |
| Msa0248970 | Msa0625630 | 0.800916 | 1.151373e-48 | -8.615850e-47 |
| Msa0253700 | Msa0625630 | 0.821691 | 3.528811e-53 | -8.615850e-47 |
| Msa0255090 | Msa0625630 | 0.807315 | 5.366459e-50 | -8.615850e-47 |
| Msa0259380 | Msa0625630 | 0.811895 | 5.569221e-51 | -8.615850e-47 |
| Msa0264870 | Msa0625630 | 0.818393 | 2.006593e-52 | -8.615850e-47 |
| Msa0267110 | Msa0625630 | 0.832709 | 8.098871e-56 | -8.615850e-47 |
| Msa0274680 | Msa0625630 | 0.829345 | 5.422631e-55 | -8.615850e-47 |
| Msa0277180 | Msa0625630 | 0.831056 | 2.072491e-55 | -8.615850e-47 |
| Msa0292400 | Msa0625630 | 0.832710 | 8.092648e-56 | -8.615850e-47 |
| Msa0298500 | Msa0625630 | 0.860270 | 2.321370e-63 | -8.615850e-47 |
| Msa0300270 | Msa0625630 | 0.800672 | 1.291320e-48 | -8.615850e-47 |
| Msa0301820 | Msa0625630 | 0.837620 | 4.668023e-57 | -8.615850e-47 |
| Msa0316810 | Msa0625630 | 0.812147 | 4.907261e-51 | -8.615850e-47 |
| Msa0318700 | Msa0625630 | 0.810021 | 1.417952e-50 | -8.615850e-47 |
| Msa0348880 | Msa0625630 | 0.820361 | 7.142850e-53 | -8.615850e-47 |
| Msa0349710 | Msa0625630 | 0.803540 | 3.320513e-49 | -8.615850e-47 |
| Msa0483910 | Msa0625630 | 0.800479 | 1.413629e-48 | -8.615850e-47 |
| Msa0500380 | Msa0625630 | 0.836225 | 1.060066e-56 | -8.615850e-47 |
| Msa0513160 | Msa0625630 | 0.828911 | 6.910573e-55 | -8.615850e-47 |
| Msa0527860 | Msa0625630 | 0.957052 | 6.856183e-115 | -8.615850e-47 |
| Msa0545340 | Msa0625630 | 0.831339 | 1.765686e-55 | -8.615850e-47 |
| Msa0546500 | Msa0625630 | 0.801029 | 1.092012e-48 | -8.615850e-47 |
| Msa0569200 | Msa0625630 | 0.808669 | 2.764641e-50 | -8.615850e-47 |
| Msa0574890 | Msa0625630 | 0.823748 | 1.172188e-53 | -8.615850e-47 |
| Msa0580370 | Msa0625630 | 0.803646 | 3.156982e-49 | -8.615850e-47 |
| Msa0582450 | Msa0625630 | 0.947534 | 5.574737e-106 | -8.615850e-47 |
| Msa0586190 | Msa0625630 | 0.950933 | 5.886443e-109 | -8.615850e-47 |
| Msa0597790 | Msa0625630 | 0.827527 | 1.489082e-54 | -8.615850e-47 |
| Msa0600930 | Msa0625630 | 0.845413 | 4.124706e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0625630 | MtrunA17_Chr4g0001991 | 97.510 | 522 | 10 | 2 | 1 | 521 | 1 | 520 | 0.0 | 1038 |
| Msa0625630 | MtrunA17_Chr3g0099901 | 36.253 | 491 | 275 | 13 | 53 | 518 | 8 | 485 | 2.00e-80 | 259 |
| Msa0625630 | MtrunA17_Chr3g0099891 | 38.889 | 396 | 209 | 9 | 129 | 518 | 86 | 454 | 3.10e-80 | 258 |
| Msa0625630 | MtrunA17_Chr2g0291201 | 39.409 | 406 | 214 | 16 | 132 | 518 | 59 | 451 | 9.44e-72 | 235 |
| Msa0625630 | MtrunA17_Chr7g0275731 | 36.804 | 413 | 221 | 10 | 121 | 518 | 97 | 484 | 4.39e-71 | 234 |
| Msa0625630 | MtrunA17_Chr1g0212321 | 35.714 | 406 | 229 | 10 | 124 | 518 | 102 | 486 | 1.44e-69 | 231 |
| Msa0625630 | MtrunA17_Chr1g0165201 | 35.616 | 365 | 213 | 6 | 163 | 518 | 118 | 469 | 1.01e-67 | 225 |
| Msa0625630 | MtrunA17_Chr3g0130931 | 36.000 | 400 | 219 | 14 | 135 | 518 | 70 | 448 | 4.57e-65 | 218 |
| Msa0625630 | MtrunA17_Chr6g0484901 | 33.253 | 415 | 243 | 9 | 120 | 518 | 95 | 491 | 6.94e-65 | 218 |
| Msa0625630 | MtrunA17_Chr1g0210201 | 35.878 | 393 | 225 | 8 | 135 | 518 | 93 | 467 | 4.33e-64 | 216 |
| Msa0625630 | MtrunA17_Chr3g0095891 | 34.286 | 385 | 225 | 12 | 156 | 518 | 80 | 458 | 1.52e-59 | 203 |
| Msa0625630 | MtrunA17_Chr5g0442921 | 33.673 | 392 | 229 | 12 | 152 | 519 | 170 | 554 | 2.89e-57 | 199 |
| Msa0625630 | MtrunA17_Chr5g0419291 | 33.611 | 360 | 206 | 13 | 174 | 518 | 87 | 428 | 6.42e-52 | 182 |
| Msa0625630 | MtrunA17_Chr5g0435871 | 31.781 | 365 | 215 | 13 | 174 | 521 | 90 | 437 | 1.05e-46 | 168 |
| Msa0625630 | MtrunA17_Chr8g0352671 | 33.243 | 367 | 205 | 14 | 174 | 519 | 90 | 437 | 1.10e-46 | 168 |
| Msa0625630 | MtrunA17_Chr2g0310831 | 31.829 | 421 | 241 | 14 | 121 | 519 | 45 | 441 | 2.48e-46 | 167 |
| Msa0625630 | MtrunA17_Chr8g0386441 | 33.056 | 360 | 211 | 14 | 174 | 519 | 87 | 430 | 1.14e-45 | 166 |
| Msa0625630 | MtrunA17_Chr5g0435971 | 31.781 | 365 | 215 | 13 | 174 | 521 | 87 | 434 | 1.45e-45 | 165 |
| Msa0625630 | MtrunA17_Chr5g0395911 | 31.807 | 415 | 235 | 15 | 129 | 519 | 24 | 414 | 1.74e-45 | 164 |
| Msa0625630 | MtrunA17_Chr5g0415951 | 31.956 | 363 | 214 | 13 | 174 | 519 | 89 | 435 | 3.40e-45 | 164 |
| Msa0625630 | MtrunA17_Chr2g0310821 | 29.124 | 491 | 285 | 17 | 40 | 519 | 5 | 443 | 2.19e-44 | 162 |
| Msa0625630 | MtrunA17_Chr8g0390761 | 31.389 | 360 | 221 | 9 | 156 | 505 | 99 | 442 | 4.80e-44 | 161 |
| Msa0625630 | MtrunA17_Chr2g0310801 | 31.010 | 416 | 245 | 14 | 121 | 519 | 44 | 434 | 2.18e-43 | 159 |
| Msa0625630 | MtrunA17_Chr2g0307991 | 32.258 | 403 | 216 | 17 | 145 | 519 | 32 | 405 | 2.39e-43 | 159 |
| Msa0625630 | MtrunA17_Chr2g0308001 | 31.075 | 428 | 249 | 18 | 116 | 519 | 4 | 409 | 5.88e-43 | 158 |
| Msa0625630 | MtrunA17_Chr2g0333991 | 32.520 | 369 | 221 | 15 | 164 | 517 | 79 | 434 | 1.14e-42 | 157 |
| Msa0625630 | MtrunA17_Chr2g0311451 | 32.884 | 371 | 221 | 15 | 164 | 519 | 79 | 436 | 8.59e-42 | 155 |
| Msa0625630 | MtrunA17_Chr8g0352661 | 32.075 | 371 | 211 | 15 | 174 | 521 | 87 | 439 | 1.32e-41 | 154 |
| Msa0625630 | MtrunA17_Chr1g0164401 | 32.626 | 377 | 210 | 14 | 161 | 519 | 79 | 429 | 2.46e-41 | 154 |
| Msa0625630 | MtrunA17_Chr3g0087851 | 30.220 | 364 | 220 | 13 | 174 | 519 | 90 | 437 | 2.49e-41 | 154 |
| Msa0625630 | MtrunA17_Chr6g0487471 | 28.429 | 401 | 257 | 10 | 135 | 519 | 49 | 435 | 3.24e-41 | 153 |
| Msa0625630 | MtrunA17_Chr5g0395931 | 30.100 | 402 | 247 | 12 | 136 | 519 | 51 | 436 | 3.23e-39 | 148 |
| Msa0625630 | MtrunA17_Chr3g0133071 | 32.918 | 401 | 235 | 14 | 133 | 518 | 56 | 437 | 6.18e-39 | 147 |
| Msa0625630 | MtrunA17_Chr4g0061641 | 33.048 | 351 | 196 | 11 | 186 | 519 | 69 | 397 | 7.25e-39 | 146 |
| Msa0625630 | MtrunA17_Chr6g0486981 | 28.469 | 418 | 265 | 15 | 122 | 519 | 34 | 437 | 9.56e-39 | 147 |
| Msa0625630 | MtrunA17_Chr8g0353261 | 30.732 | 410 | 247 | 16 | 124 | 519 | 48 | 434 | 1.58e-38 | 146 |
| Msa0625630 | MtrunA17_Chr5g0395871 | 31.335 | 367 | 210 | 15 | 173 | 519 | 81 | 425 | 3.97e-36 | 139 |
| Msa0625630 | MtrunA17_Chr7g0267171 | 28.899 | 436 | 248 | 16 | 130 | 518 | 45 | 465 | 3.82e-35 | 137 |
| Msa0625630 | MtrunA17_Chr5g0399171 | 28.571 | 420 | 231 | 19 | 159 | 521 | 65 | 472 | 4.68e-35 | 137 |
| Msa0625630 | MtrunA17_Chr6g0457401 | 30.025 | 403 | 248 | 12 | 135 | 519 | 51 | 437 | 3.80e-34 | 134 |
| Msa0625630 | MtrunA17_Chr4g0056211 | 27.619 | 420 | 234 | 17 | 158 | 519 | 64 | 471 | 7.97e-32 | 128 |
| Msa0625630 | MtrunA17_Chr3g0112051 | 29.101 | 378 | 201 | 14 | 171 | 520 | 73 | 411 | 1.68e-31 | 126 |
| Msa0625630 | MtrunA17_Chr7g0249451 | 27.907 | 430 | 250 | 19 | 129 | 519 | 23 | 431 | 2.00e-31 | 127 |
| Msa0625630 | MtrunA17_Chr3g0082281 | 35.000 | 280 | 160 | 9 | 251 | 519 | 52 | 320 | 5.75e-31 | 122 |
| Msa0625630 | MtrunA17_Chr7g0239001 | 31.250 | 384 | 217 | 18 | 171 | 521 | 59 | 428 | 6.48e-31 | 124 |
| Msa0625630 | MtrunA17_Chr2g0307461 | 29.219 | 397 | 220 | 17 | 143 | 505 | 48 | 417 | 7.04e-31 | 124 |
| Msa0625630 | MtrunA17_Chr5g0401601 | 30.303 | 363 | 214 | 15 | 178 | 519 | 95 | 439 | 4.33e-30 | 124 |
| Msa0625630 | MtrunA17_Chr1g0189381 | 29.306 | 389 | 224 | 17 | 164 | 519 | 60 | 430 | 4.33e-30 | 123 |
| Msa0625630 | MtrunA17_Chr4g0023351 | 30.945 | 307 | 179 | 12 | 116 | 406 | 4 | 293 | 2.40e-29 | 117 |
| Msa0625630 | MtrunA17_Chr3g0110191 | 27.441 | 379 | 210 | 19 | 176 | 519 | 91 | 439 | 5.99e-29 | 119 |
| Msa0625630 | MtrunA17_Chr7g0221681 | 26.859 | 417 | 251 | 17 | 140 | 519 | 35 | 434 | 9.51e-29 | 119 |
| Msa0625630 | MtrunA17_Chr5g0434411 | 27.882 | 373 | 232 | 15 | 171 | 519 | 79 | 438 | 6.78e-27 | 113 |
| Msa0625630 | MtrunA17_Chr4g0053721 | 28.571 | 364 | 219 | 15 | 178 | 519 | 87 | 431 | 3.02e-26 | 112 |
| Msa0625630 | MtrunA17_Chr4g0027681 | 29.178 | 377 | 215 | 18 | 176 | 520 | 82 | 438 | 1.97e-25 | 109 |
| Msa0625630 | MtrunA17_Chr5g0395891 | 31.068 | 309 | 181 | 12 | 227 | 519 | 21 | 313 | 9.65e-24 | 102 |
| Msa0625630 | MtrunA17_Chr1g0179751 | 28.833 | 437 | 249 | 22 | 122 | 520 | 59 | 471 | 3.45e-23 | 102 |
| Msa0625630 | MtrunA17_Chr6g0484731 | 27.041 | 392 | 243 | 17 | 155 | 518 | 174 | 550 | 2.46e-22 | 100 |
| Msa0625630 | MtrunA17_Chr5g0419151 | 31.343 | 268 | 164 | 9 | 263 | 519 | 110 | 368 | 2.48e-22 | 98.6 |
| Msa0625630 | MtrunA17_Chr2g0312941 | 25.000 | 400 | 243 | 14 | 153 | 516 | 73 | 451 | 2.49e-22 | 99.8 |
| Msa0625630 | MtrunA17_Chr2g0320621 | 29.759 | 373 | 197 | 18 | 187 | 520 | 93 | 439 | 1.45e-21 | 97.8 |
| Msa0625630 | MtrunA17_Chr7g0265331 | 28.877 | 374 | 220 | 18 | 176 | 520 | 86 | 442 | 5.83e-21 | 95.9 |
| Msa0625630 | MtrunA17_Chr3g0124421 | 25.455 | 440 | 270 | 17 | 106 | 518 | 42 | 450 | 1.13e-20 | 95.1 |
| Msa0625630 | MtrunA17_Chr2g0309561 | 26.580 | 459 | 248 | 21 | 129 | 518 | 70 | 508 | 1.19e-20 | 95.1 |
| Msa0625630 | MtrunA17_Chr1g0179091 | 26.685 | 356 | 213 | 12 | 173 | 519 | 51 | 367 | 1.85e-20 | 93.2 |
| Msa0625630 | MtrunA17_Chr3g0130741 | 26.810 | 373 | 228 | 21 | 173 | 521 | 86 | 437 | 9.79e-20 | 92.0 |
| Msa0625630 | MtrunA17_Chr8g0371351 | 27.467 | 375 | 216 | 17 | 174 | 518 | 101 | 449 | 1.63e-17 | 85.5 |
| Msa0625630 | MtrunA17_Chr8g0352691 | 30.855 | 269 | 166 | 10 | 261 | 519 | 2 | 260 | 2.01e-17 | 82.4 |
| Msa0625630 | MtrunA17_Chr5g0434441 | 25.538 | 372 | 244 | 15 | 171 | 519 | 66 | 427 | 2.99e-17 | 84.3 |
| Msa0625630 | MtrunA17_Chr1g0159791 | 25.474 | 369 | 234 | 15 | 176 | 521 | 62 | 412 | 3.33e-17 | 84.0 |
| Msa0625630 | MtrunA17_Chr5g0425141 | 24.198 | 405 | 253 | 18 | 142 | 518 | 71 | 449 | 1.05e-16 | 82.8 |
| Msa0625630 | MtrunA17_Chr1g0185661 | 26.579 | 380 | 205 | 18 | 185 | 514 | 60 | 415 | 2.16e-16 | 82.8 |
| Msa0625630 | MtrunA17_Chr8g0352681 | 33.913 | 115 | 72 | 3 | 135 | 246 | 50 | 163 | 1.46e-15 | 74.7 |
| Msa0625630 | MtrunA17_Chr4g0065581 | 24.178 | 426 | 225 | 19 | 161 | 514 | 39 | 438 | 2.13e-15 | 78.6 |
| Msa0625630 | MtrunA17_Chr2g0287821 | 25.197 | 381 | 211 | 20 | 185 | 514 | 82 | 439 | 3.67e-14 | 74.7 |
| Msa0625630 | MtrunA17_Chr1g0185651 | 24.627 | 402 | 222 | 16 | 171 | 514 | 54 | 432 | 2.57e-12 | 68.9 |
| Msa0625630 | MtrunA17_Chr2g0287811 | 23.393 | 389 | 232 | 15 | 174 | 514 | 40 | 410 | 2.17e-11 | 65.9 |
| Msa0625630 | MtrunA17_Chr2g0287781 | 23.670 | 376 | 221 | 12 | 176 | 505 | 41 | 396 | 7.44e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0625630 | AT1G79720.1 | 58.255 | 424 | 171 | 4 | 99 | 518 | 61 | 482 | 5.50e-171 | 492 |
| Msa0625630 | AT5G10770.1 | 43.467 | 398 | 207 | 10 | 129 | 519 | 88 | 474 | 5.03e-97 | 302 |
| Msa0625630 | AT5G10760.1 | 38.795 | 415 | 226 | 12 | 111 | 518 | 71 | 464 | 3.41e-76 | 248 |
| Msa0625630 | AT3G18490.1 | 34.633 | 436 | 245 | 12 | 106 | 518 | 82 | 500 | 1.35e-68 | 229 |
| Msa0625630 | AT3G61820.1 | 35.904 | 415 | 235 | 10 | 121 | 518 | 83 | 483 | 2.21e-68 | 228 |
| Msa0625630 | AT1G25510.1 | 37.028 | 424 | 234 | 12 | 107 | 518 | 81 | 483 | 5.34e-68 | 227 |
| Msa0625630 | AT3G20015.1 | 33.103 | 435 | 262 | 9 | 96 | 518 | 53 | 470 | 1.51e-67 | 225 |
| Msa0625630 | AT1G01300.1 | 35.990 | 414 | 230 | 13 | 121 | 519 | 92 | 485 | 2.52e-67 | 225 |
| Msa0625630 | AT3G59080.1 | 34.949 | 392 | 225 | 14 | 154 | 521 | 150 | 535 | 1.43e-56 | 197 |
| Msa0625630 | AT2G42980.1 | 34.856 | 416 | 234 | 16 | 137 | 521 | 118 | 527 | 2.95e-56 | 197 |
| Msa0625630 | AT2G03200.1 | 35.519 | 366 | 203 | 12 | 173 | 518 | 106 | 458 | 1.75e-55 | 193 |
| Msa0625630 | AT1G09750.1 | 34.584 | 373 | 214 | 12 | 161 | 518 | 91 | 448 | 4.60e-49 | 176 |
| Msa0625630 | AT3G54400.1 | 32.891 | 377 | 210 | 13 | 161 | 519 | 74 | 425 | 3.65e-47 | 170 |
| Msa0625630 | AT1G64830.1 | 33.795 | 361 | 207 | 14 | 174 | 519 | 86 | 429 | 9.60e-45 | 163 |
| Msa0625630 | AT3G59080.2 | 31.888 | 392 | 201 | 13 | 154 | 521 | 150 | 499 | 3.24e-44 | 163 |
| Msa0625630 | AT5G33340.1 | 31.566 | 396 | 245 | 11 | 135 | 519 | 55 | 435 | 3.85e-44 | 162 |
| Msa0625630 | AT1G31450.1 | 30.958 | 407 | 245 | 14 | 137 | 519 | 48 | 442 | 3.72e-43 | 159 |
| Msa0625630 | AT2G35615.1 | 32.452 | 416 | 237 | 16 | 130 | 519 | 47 | 444 | 1.43e-42 | 157 |
| Msa0625630 | AT3G25700.1 | 30.077 | 389 | 239 | 13 | 159 | 520 | 69 | 451 | 3.97e-42 | 157 |
| Msa0625630 | AT5G07030.1 | 29.647 | 425 | 243 | 16 | 115 | 519 | 67 | 455 | 1.97e-41 | 155 |
| Msa0625630 | AT4G30030.1 | 29.742 | 427 | 217 | 18 | 144 | 521 | 30 | 422 | 1.89e-38 | 146 |
| Msa0625630 | AT2G28040.2 | 29.144 | 374 | 223 | 12 | 157 | 519 | 40 | 382 | 2.15e-36 | 139 |
| Msa0625630 | AT2G28040.1 | 28.608 | 388 | 235 | 12 | 143 | 519 | 35 | 391 | 2.39e-36 | 139 |
| Msa0625630 | AT5G36260.1 | 27.990 | 418 | 240 | 18 | 140 | 519 | 40 | 434 | 3.48e-36 | 140 |
| Msa0625630 | AT2G28010.1 | 29.692 | 357 | 211 | 9 | 174 | 519 | 65 | 392 | 2.11e-35 | 137 |
| Msa0625630 | AT4G30040.1 | 27.896 | 423 | 239 | 17 | 121 | 513 | 41 | 427 | 2.27e-35 | 137 |
| Msa0625630 | AT5G02190.1 | 31.733 | 375 | 201 | 19 | 183 | 518 | 84 | 442 | 4.15e-34 | 134 |
| Msa0625630 | AT2G28030.1 | 30.294 | 340 | 199 | 9 | 189 | 519 | 78 | 388 | 5.54e-34 | 133 |
| Msa0625630 | AT3G02740.1 | 30.332 | 422 | 237 | 21 | 131 | 519 | 43 | 440 | 2.41e-32 | 130 |
| Msa0625630 | AT3G52500.1 | 30.102 | 392 | 215 | 13 | 174 | 519 | 90 | 468 | 3.08e-32 | 129 |
| Msa0625630 | AT2G28225.1 | 30.411 | 365 | 202 | 14 | 174 | 519 | 67 | 398 | 1.47e-31 | 126 |
| Msa0625630 | AT5G45120.1 | 30.070 | 429 | 231 | 21 | 153 | 518 | 56 | 478 | 1.22e-30 | 125 |
| Msa0625630 | AT3G02740.2 | 30.423 | 378 | 209 | 18 | 174 | 519 | 10 | 365 | 6.06e-30 | 122 |
| Msa0625630 | AT2G23945.1 | 27.384 | 409 | 246 | 16 | 135 | 518 | 66 | 448 | 9.77e-30 | 122 |
| Msa0625630 | AT2G28220.1 | 29.396 | 364 | 207 | 12 | 174 | 519 | 67 | 398 | 1.93e-29 | 120 |
| Msa0625630 | AT5G43100.2 | 29.006 | 362 | 216 | 13 | 178 | 521 | 82 | 420 | 3.61e-29 | 120 |
| Msa0625630 | AT5G43100.1 | 29.006 | 362 | 216 | 13 | 178 | 521 | 82 | 420 | 4.80e-29 | 121 |
| Msa0625630 | AT2G39710.1 | 28.307 | 378 | 222 | 16 | 171 | 514 | 64 | 426 | 1.44e-28 | 118 |
| Msa0625630 | AT1G65240.1 | 25.926 | 405 | 242 | 17 | 150 | 519 | 46 | 427 | 3.50e-28 | 117 |
| Msa0625630 | AT1G66180.1 | 26.862 | 376 | 223 | 15 | 176 | 521 | 76 | 429 | 2.80e-27 | 114 |
| Msa0625630 | AT1G05840.1 | 26.353 | 425 | 252 | 17 | 136 | 519 | 35 | 439 | 2.83e-27 | 115 |
| Msa0625630 | AT3G12700.1 | 26.603 | 421 | 254 | 18 | 127 | 519 | 68 | 461 | 6.06e-27 | 114 |
| Msa0625630 | AT3G50050.1 | 28.611 | 360 | 218 | 16 | 178 | 519 | 99 | 437 | 1.29e-26 | 114 |
| Msa0625630 | AT5G37540.1 | 28.075 | 374 | 225 | 16 | 176 | 521 | 84 | 441 | 1.49e-26 | 112 |
| Msa0625630 | AT2G36670.2 | 26.573 | 429 | 263 | 18 | 124 | 519 | 49 | 458 | 6.94e-24 | 105 |
| Msa0625630 | AT2G36670.1 | 26.559 | 433 | 261 | 18 | 125 | 519 | 50 | 463 | 9.67e-24 | 105 |
| Msa0625630 | AT1G49050.2 | 27.019 | 359 | 221 | 17 | 189 | 518 | 49 | 395 | 2.62e-23 | 102 |
| Msa0625630 | AT2G36670.4 | 28.075 | 374 | 220 | 16 | 176 | 519 | 38 | 392 | 1.14e-22 | 101 |
| Msa0625630 | AT2G36670.3 | 28.075 | 374 | 220 | 16 | 176 | 519 | 38 | 392 | 1.14e-22 | 101 |
| Msa0625630 | AT1G49050.1 | 27.019 | 359 | 221 | 17 | 189 | 518 | 222 | 568 | 1.39e-22 | 102 |
| Msa0625630 | AT1G08210.3 | 29.600 | 375 | 214 | 16 | 176 | 520 | 136 | 490 | 3.39e-22 | 100 |
| Msa0625630 | AT1G08210.4 | 29.600 | 375 | 214 | 16 | 176 | 520 | 122 | 476 | 3.69e-22 | 100 |
| Msa0625630 | AT4G12920.1 | 25.722 | 381 | 246 | 12 | 150 | 518 | 32 | 387 | 4.94e-22 | 98.6 |
| Msa0625630 | AT1G08210.1 | 29.600 | 375 | 214 | 16 | 176 | 520 | 88 | 442 | 5.84e-22 | 99.4 |
| Msa0625630 | AT5G22850.1 | 27.614 | 373 | 221 | 15 | 178 | 519 | 87 | 441 | 1.55e-20 | 95.1 |
| Msa0625630 | AT5G10080.1 | 26.620 | 432 | 257 | 21 | 116 | 518 | 53 | 453 | 2.60e-20 | 94.7 |
| Msa0625630 | AT5G24820.1 | 31.429 | 245 | 150 | 10 | 281 | 518 | 166 | 399 | 6.80e-20 | 92.4 |
| Msa0625630 | AT3G51360.9 | 27.873 | 409 | 242 | 22 | 137 | 518 | 63 | 445 | 2.30e-19 | 91.7 |
| Msa0625630 | AT3G51360.1 | 27.873 | 409 | 242 | 22 | 137 | 518 | 53 | 435 | 2.60e-19 | 91.3 |
| Msa0625630 | AT1G08210.2 | 27.930 | 401 | 214 | 16 | 176 | 520 | 88 | 469 | 1.08e-18 | 89.7 |
| Msa0625630 | AT4G16563.1 | 26.949 | 449 | 239 | 18 | 145 | 519 | 59 | 492 | 1.20e-18 | 89.4 |
| Msa0625630 | AT1G77480.2 | 26.330 | 376 | 223 | 19 | 174 | 518 | 67 | 419 | 2.56e-18 | 87.8 |
| Msa0625630 | AT4G35880.1 | 27.027 | 370 | 220 | 17 | 174 | 518 | 107 | 451 | 3.86e-18 | 87.8 |
| Msa0625630 | AT1G49050.3 | 30.380 | 237 | 141 | 13 | 189 | 412 | 222 | 447 | 4.02e-18 | 87.4 |
| Msa0625630 | AT1G77480.1 | 26.330 | 376 | 223 | 19 | 174 | 518 | 67 | 419 | 4.69e-18 | 87.4 |
| Msa0625630 | AT3G51360.7 | 29.032 | 372 | 217 | 21 | 171 | 518 | 3 | 351 | 9.26e-18 | 85.9 |
| Msa0625630 | AT2G17760.1 | 25.424 | 413 | 244 | 21 | 134 | 518 | 73 | 449 | 1.40e-17 | 86.3 |
| Msa0625630 | AT3G42550.1 | 26.810 | 373 | 205 | 17 | 165 | 520 | 70 | 391 | 2.75e-17 | 84.7 |
| Msa0625630 | AT3G51360.6 | 27.676 | 383 | 226 | 20 | 137 | 493 | 63 | 420 | 4.73e-15 | 77.8 |
| Msa0625630 | AT3G51360.10 | 27.676 | 383 | 226 | 20 | 137 | 493 | 53 | 410 | 7.26e-15 | 77.4 |
| Msa0625630 | AT4G35880.2 | 27.577 | 359 | 204 | 18 | 174 | 501 | 107 | 440 | 8.76e-15 | 77.0 |
| Msa0625630 | AT3G51340.1 | 25.390 | 449 | 249 | 24 | 125 | 518 | 42 | 459 | 5.24e-14 | 75.1 |
| Msa0625630 | AT3G51360.5 | 27.348 | 362 | 213 | 19 | 137 | 473 | 63 | 399 | 5.76e-14 | 74.3 |
| Msa0625630 | AT3G51360.4 | 27.348 | 362 | 213 | 19 | 137 | 473 | 53 | 389 | 7.83e-14 | 73.9 |
| Msa0625630 | AT1G03220.1 | 26.190 | 378 | 209 | 17 | 186 | 514 | 58 | 414 | 2.50e-13 | 72.4 |
| Msa0625630 | AT1G44130.1 | 24.747 | 396 | 235 | 20 | 157 | 518 | 33 | 399 | 2.78e-13 | 72.0 |
| Msa0625630 | AT3G51340.3 | 26.462 | 359 | 193 | 20 | 125 | 439 | 42 | 373 | 6.69e-13 | 70.9 |
| Msa0625630 | AT3G51360.2 | 29.766 | 299 | 162 | 17 | 137 | 412 | 63 | 336 | 8.30e-13 | 70.1 |
| Msa0625630 | AT3G51340.4 | 26.536 | 358 | 192 | 20 | 125 | 438 | 42 | 372 | 8.37e-13 | 70.5 |
| Msa0625630 | AT3G25700.2 | 31.429 | 140 | 86 | 4 | 159 | 289 | 69 | 207 | 1.13e-12 | 69.7 |
| Msa0625630 | AT3G51350.1 | 26.316 | 304 | 176 | 16 | 176 | 453 | 106 | 387 | 1.55e-11 | 67.0 |
| Msa0625630 | AT3G51360.3 | 27.812 | 320 | 194 | 18 | 213 | 518 | 13 | 309 | 1.90e-11 | 66.2 |
| Msa0625630 | AT3G51360.8 | 27.812 | 320 | 194 | 18 | 213 | 518 | 13 | 309 | 1.90e-11 | 66.2 |
| Msa0625630 | AT5G48430.1 | 25.641 | 234 | 152 | 9 | 298 | 514 | 161 | 389 | 5.78e-11 | 65.1 |
Find 131 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCACCAGCGCTTTCAATTT+TGG | 0.116640 | 4_3:-4791045 | Msa0625630:CDS |
| TTCCCTTGCAAATCCAATTT+TGG | 0.138834 | 4_3:+4790794 | None:intergenic |
| ATTAGCTTCTGGTATAAATT+TGG | 0.167225 | 4_3:-4791834 | Msa0625630:CDS |
| GGTTTATTTGGCGGAGTTTC+CGG | 0.173823 | 4_3:-4791440 | Msa0625630:CDS |
| TACCAGAAGCTAATGGAATT+TGG | 0.188959 | 4_3:+4791843 | None:intergenic |
| CTGCTAAACTCACTTGATTC+TGG | 0.197254 | 4_3:+4792600 | None:intergenic |
| GCTCAAAGAGGAAAATTAAT+TGG | 0.217816 | 4_3:-4791979 | Msa0625630:CDS |
| CTGTAGTAAATTGAAGATTT+TGG | 0.227131 | 4_3:+4791624 | None:intergenic |
| ATCACTCTACAATGCTTTAA+AGG | 0.230293 | 4_3:-4791102 | Msa0625630:CDS |
| ACTTGTGCATGAGGAATTAT+TGG | 0.230427 | 4_3:+4792941 | None:intergenic |
| AGATTCTGAGTGGTGGAATT+TGG | 0.234300 | 4_3:+4792879 | None:intergenic |
| AGGAACAACAAAGGTTTATT+TGG | 0.239871 | 4_3:-4791452 | Msa0625630:CDS |
| CAAACTTGTGAAACATCTTT+TGG | 0.244817 | 4_3:+4790912 | None:intergenic |
| GCTTCTGGTTCGTTAGTTAT+AGG | 0.255179 | 4_3:-4791317 | Msa0625630:CDS |
| TTGCAAAGGAACCATCAATT+TGG | 0.275677 | 4_3:-4792642 | Msa0625630:CDS |
| GATGCCAAACAGTCCAAAAT+TGG | 0.277573 | 4_3:-4790807 | Msa0625630:CDS |
| TGTAACTACACTGTTAATTA+TGG | 0.278665 | 4_3:-4791563 | Msa0625630:CDS |
| GCATAAGAATGGCATTTATC+AGG | 0.289129 | 4_3:-4790601 | Msa0625630:three_prime_UTR |
| TTATAGGAAGAGGAGTTAGA+AGG | 0.297373 | 4_3:+4791674 | None:intergenic |
| ATTGCATAGTAATGAGTTAT+AGG | 0.299729 | 4_3:+4791658 | None:intergenic |
| TATGCTAGTACCATGTTATA+AGG | 0.302392 | 4_3:+4790619 | None:intergenic |
| TGGCGGAGTTTCCGGTATAA+TGG | 0.306505 | 4_3:-4791432 | Msa0625630:CDS |
| AACCTCTATCCTTCATTTCC+AGG | 0.323356 | 4_3:+4792005 | None:intergenic |
| TCCAATTGCTTACACCAGTA+TGG | 0.324069 | 4_3:-4791264 | Msa0625630:CDS |
| CTTGTGCATGAGGAATTATT+GGG | 0.332740 | 4_3:+4792942 | None:intergenic |
| TTAAACTACATTGTGACAAT+AGG | 0.336630 | 4_3:-4791806 | Msa0625630:CDS |
| CTTTACTTTATCATTGCAAA+TGG | 0.351371 | 4_3:-4792705 | Msa0625630:CDS |
| GGCGGCATTCTAATTGATTC+GGG | 0.357040 | 4_3:-4791149 | Msa0625630:CDS |
| GGCGGAGTTTCCGGTATAAT+GGG | 0.359276 | 4_3:-4791431 | Msa0625630:CDS |
| GGTGTTGAACACCTTAGTTT+TGG | 0.364925 | 4_3:-4791512 | Msa0625630:CDS |
| AACCCTTTGAACCAAATTGA+TGG | 0.374016 | 4_3:+4792631 | None:intergenic |
| GTTTCCGGTATAATGGGATT+AGG | 0.374940 | 4_3:-4791425 | Msa0625630:CDS |
| TCTCAAACCAATACTACATT+TGG | 0.375336 | 4_3:-4791380 | Msa0625630:CDS |
| ATCCAAATTCCATTAGCTTC+TGG | 0.382267 | 4_3:-4791845 | Msa0625630:CDS |
| AGATGTTTCACAAGTTTGTT+TGG | 0.383515 | 4_3:-4790907 | Msa0625630:CDS |
| CGGCGGCATTCTAATTGATT+CGG | 0.391462 | 4_3:-4791150 | Msa0625630:CDS |
| GTTCTCAAAATGCATACTTA+AGG | 0.391586 | 4_3:+4790977 | None:intergenic |
| TCCTAGGTATATTGTTGTGT+TGG | 0.394898 | 4_3:-4790575 | Msa0625630:three_prime_UTR |
| AACCATCAATTTGGTTCAAA+GGG | 0.397366 | 4_3:-4792633 | Msa0625630:CDS |
| TTTACTTTATCATTGCAAAT+GGG | 0.400260 | 4_3:-4792704 | Msa0625630:CDS |
| GCGTTCGTTCAATGCAAAAC+AGG | 0.405597 | 4_3:-4791916 | Msa0625630:CDS |
| GACCCATGTTAAGTCACTTC+CGG | 0.405924 | 4_3:+4791748 | None:intergenic |
| ACAACAGATAGTGGAGCTTC+TGG | 0.413420 | 4_3:-4791332 | Msa0625630:CDS |
| ACAGTGTAGTTACAACTAGA+TGG | 0.419587 | 4_3:+4791572 | None:intergenic |
| TGCTAAACTCACTTGATTCT+GGG | 0.420600 | 4_3:+4792601 | None:intergenic |
| GATACATGTTTCAATCTGAC+TGG | 0.429219 | 4_3:-4791023 | Msa0625630:CDS |
| ACCATACTGGTGTAAGCAAT+TGG | 0.433713 | 4_3:+4791263 | None:intergenic |
| TACATTCTAACGACTAATGA+AGG | 0.435890 | 4_3:+4790482 | None:intergenic |
| AACTCCTCCAAATGTAGTAT+TGG | 0.435957 | 4_3:+4791373 | None:intergenic |
| TATAGGAAGAGGAGTTAGAA+GGG | 0.438177 | 4_3:+4791675 | None:intergenic |
| CAAAATCTTCAATTTACTAC+AGG | 0.450090 | 4_3:-4791623 | Msa0625630:CDS |
| TGGTTTGAGATATCATTGAT+AGG | 0.450378 | 4_3:+4791393 | None:intergenic |
| GAAAATGACATGGCCATCAT+TGG | 0.451254 | 4_3:-4790864 | Msa0625630:CDS |
| AAATTTATACCAGAAGCTAA+TGG | 0.452517 | 4_3:+4791836 | None:intergenic |
| GAGTTAGAAGGGTTGAAAAC+AGG | 0.454527 | 4_3:+4791686 | None:intergenic |
| GAACCATCAATTTGGTTCAA+AGG | 0.454718 | 4_3:-4792634 | Msa0625630:CDS |
| TTTCAATCTGACTGGGATTG+AGG | 0.457854 | 4_3:-4791015 | Msa0625630:CDS |
| ATTGAAAGCGCTGGTGCAGT+AGG | 0.468332 | 4_3:+4791050 | None:intergenic |
| TGCTATTATCCTGGAAATGA+AGG | 0.469534 | 4_3:-4792014 | Msa0625630:CDS |
| CTACATTGTGACAATAGGAT+TGG | 0.476581 | 4_3:-4791801 | Msa0625630:CDS |
| CTGAAATACCTCCAAAACTA+AGG | 0.477800 | 4_3:+4791501 | None:intergenic |
| TTTGAGAGTGAGAGTGAGAG+AGG | 0.478223 | 4_3:+4792845 | None:intergenic |
| GAAGCTCCACTATCTGTTGT+TGG | 0.483250 | 4_3:+4791335 | None:intergenic |
| TGTTTACCAACAACAGATAG+TGG | 0.485285 | 4_3:-4791341 | Msa0625630:CDS |
| TTGCTGATAATTCCCAATGA+TGG | 0.485574 | 4_3:+4790851 | None:intergenic |
| AACAACAAAGGTTTATTTGG+CGG | 0.485648 | 4_3:-4791449 | Msa0625630:CDS |
| TAGTAATGAGTTATAGGAAG+AGG | 0.486105 | 4_3:+4791664 | None:intergenic |
| GCTATACAAGATACAAGCTT+TGG | 0.488883 | 4_3:-4791176 | Msa0625630:CDS |
| GGAGAAAGGTGCTATTATCC+TGG | 0.501530 | 4_3:-4792023 | Msa0625630:CDS |
| AATAATTCCTCATGCACAAG+TGG | 0.503365 | 4_3:-4792939 | Msa0625630:five_prime_UTR |
| CTGTGGATTCGAAACCATAC+TGG | 0.504481 | 4_3:+4791250 | None:intergenic |
| AAAATGACATGGCCATCATT+GGG | 0.506693 | 4_3:-4790863 | Msa0625630:CDS |
| TACATTGTGACAATAGGATT+GGG | 0.507768 | 4_3:-4791800 | Msa0625630:CDS |
| TACACTGTTAATTATGGTGA+TGG | 0.513189 | 4_3:-4791557 | Msa0625630:CDS |
| TCTTCCTAATCCCATTATAC+CGG | 0.514997 | 4_3:+4791421 | None:intergenic |
| TTTAAAGCATTGTAGAGTGA+TGG | 0.518382 | 4_3:+4791104 | None:intergenic |
| AGTCCAAAATTGGATTTGCA+AGG | 0.526949 | 4_3:-4790797 | Msa0625630:CDS |
| AGAGAGGAGATTCTGAGTGG+TGG | 0.529729 | 4_3:+4792872 | None:intergenic |
| CAAACCAATACTACATTTGG+AGG | 0.533626 | 4_3:-4791377 | Msa0625630:CDS |
| TCATTTACTGATGGAGAGCT+AGG | 0.535270 | 4_3:-4791533 | Msa0625630:CDS |
| TACTTTATCATTGCAAATGG+GGG | 0.538295 | 4_3:-4792702 | Msa0625630:CDS |
| AGGATTCGAGCAAAGGTCAC+TGG | 0.542029 | 4_3:-4791896 | Msa0625630:CDS |
| ACATGGTACTAGCATAAGAA+TGG | 0.545030 | 4_3:-4790612 | Msa0625630:three_prime_UTR |
| GTATACCCCACTTGTGCATG+AGG | 0.547445 | 4_3:+4792932 | None:intergenic |
| ATCCTGGAAATGAAGGATAG+AGG | 0.549194 | 4_3:-4792007 | Msa0625630:CDS |
| GCAAAACAGGATTCGAGCAA+AGG | 0.549551 | 4_3:-4791903 | Msa0625630:CDS |
| TTACTTTATCATTGCAAATG+GGG | 0.552454 | 4_3:-4792703 | Msa0625630:CDS |
| GGGGACGGTGATCACGAGAC+TGG | 0.553312 | 4_3:-4791129 | Msa0625630:CDS |
| ATTTGGCATGAGAACAAAAG+AGG | 0.553530 | 4_3:+4792896 | None:intergenic |
| ACATAAAAGTTTGACAGCTG+TGG | 0.554888 | 4_3:+4791233 | None:intergenic |
| GCTATACTAGATGTCTTACA+TGG | 0.558943 | 4_3:-4790741 | Msa0625630:three_prime_UTR |
| GTATCCAAAATTGAAAGCGC+TGG | 0.559484 | 4_3:+4791041 | None:intergenic |
| AATGGAAGTAGTAAGAAAGA+AGG | 0.561935 | 4_3:+4792818 | None:intergenic |
| ATACATGTTTCAATCTGACT+GGG | 0.569669 | 4_3:-4791022 | Msa0625630:CDS |
| GTCCAAAATTGGATTTGCAA+GGG | 0.571372 | 4_3:-4790796 | Msa0625630:CDS |
| CTATGTTTAGCCTTATAACA+TGG | 0.585435 | 4_3:-4790629 | Msa0625630:three_prime_UTR |
| TCAAAATGCATACTTAAGGT+AGG | 0.585670 | 4_3:+4790981 | None:intergenic |
| TTGAAAGCGCTGGTGCAGTA+GGG | 0.585756 | 4_3:+4791051 | None:intergenic |
| GGTGATGGATCATTTACTGA+TGG | 0.587322 | 4_3:-4791542 | Msa0625630:CDS |
| TCAAAGTGCAAATGTTGCAA+AGG | 0.591098 | 4_3:-4792656 | Msa0625630:CDS |
| AACCTCACCGGCATAGATGT+TGG | 0.592272 | 4_3:-4791206 | Msa0625630:CDS |
| ATACCGGAAGTGACTTAACA+TGG | 0.592681 | 4_3:-4791751 | Msa0625630:CDS |
| CACACCACCAACATCTATGC+CGG | 0.596117 | 4_3:+4791199 | None:intergenic |
| ATGACTGTGATAATCGATAC+CGG | 0.597232 | 4_3:-4791767 | Msa0625630:CDS |
| ATTATCAGCAAAGGAATCAG+AGG | 0.598713 | 4_3:-4790839 | Msa0625630:CDS |
| CATTCTAATTGATTCGGGGA+CGG | 0.599880 | 4_3:-4791144 | Msa0625630:CDS |
| AGTTATAGGTAACGAGTCGT+CGG | 0.608924 | 4_3:-4791303 | Msa0625630:CDS |
| ATAATTCCTCATGCACAAGT+GGG | 0.612413 | 4_3:-4792938 | Msa0625630:five_prime_UTR |
| CGGCATAGATGTTGGTGGTG+TGG | 0.619156 | 4_3:-4791198 | Msa0625630:CDS |
| GATACAAGCTTTGGCAACGG+CGG | 0.621391 | 4_3:-4791167 | Msa0625630:CDS |
| GGTTGTGGTAGGAACAACAA+AGG | 0.627341 | 4_3:-4791461 | Msa0625630:CDS |
| ACATTCTAACGACTAATGAA+GGG | 0.629925 | 4_3:+4790483 | None:intergenic |
| TGACTATAACATGACATACA+AGG | 0.632056 | 4_3:+4791716 | None:intergenic |
| ATGACATACAAGGATCACAT+TGG | 0.633313 | 4_3:+4791726 | None:intergenic |
| TCATTGGGAATTATCAGCAA+AGG | 0.636393 | 4_3:-4790848 | Msa0625630:CDS |
| CTCACCGGCATAGATGTTGG+TGG | 0.638961 | 4_3:-4791203 | Msa0625630:CDS |
| GCCAACACAACAATATACCT+AGG | 0.649059 | 4_3:+4790574 | None:intergenic |
| CAAGATACAAGCTTTGGCAA+CGG | 0.651619 | 4_3:-4791170 | Msa0625630:CDS |
| TTGTGCATGAGGAATTATTG+GGG | 0.654243 | 4_3:+4792943 | None:intergenic |
| GATCTGAATGTGGATGCAGT+TGG | 0.657282 | 4_3:-4790948 | Msa0625630:CDS |
| TTATCAGCAAAGGAATCAGA+GGG | 0.658240 | 4_3:-4790838 | Msa0625630:CDS |
| ATAGAGGTTATTGCTCAAAG+AGG | 0.659200 | 4_3:-4791991 | Msa0625630:CDS |
| AAAAGAGAGGAGATTCTGAG+TGG | 0.664323 | 4_3:+4792869 | None:intergenic |
| GAACAATGTTGATCTGAATG+TGG | 0.668148 | 4_3:-4790958 | Msa0625630:CDS |
| ATGTCATGTTATAGTCAACA+AGG | 0.669193 | 4_3:-4791710 | Msa0625630:CDS |
| TCTTTCTGATGAAAATGACA+TGG | 0.672995 | 4_3:-4790874 | Msa0625630:CDS |
| TAATTCCTCATGCACAAGTG+GGG | 0.678160 | 4_3:-4792937 | Msa0625630:five_prime_UTR |
| GCGGCATTCTAATTGATTCG+GGG | 0.686863 | 4_3:-4791148 | Msa0625630:CDS |
| TACCGGAAGTGACTTAACAT+GGG | 0.691503 | 4_3:-4791750 | Msa0625630:CDS |
| CACCAACATCTATGCCGGTG+AGG | 0.705570 | 4_3:+4791204 | None:intergenic |
| TAAACTCACTTGATTCTGGG+AGG | 0.709976 | 4_3:+4792604 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAAATGTGATTTTTTA+TGG | - | chr4_3:4790889-4790908 | Msa0625630:CDS | 10.0% |
| !! | AAAACAAAAGAAAGAAAAAA+TGG | + | chr4_3:4790738-4790757 | None:intergenic | 15.0% |
| !!! | TTTTTTTTCAAATTTCACAT+TGG | - | chr4_3:4790925-4790944 | Msa0625630:CDS | 15.0% |
| !!! | ATATCTTCTTTTAATACTTT+CGG | + | chr4_3:4791236-4791255 | None:intergenic | 15.0% |
| !! | GAAAAAGAGAAAAATTCTAA+TGG | + | chr4_3:4790667-4790686 | None:intergenic | 20.0% |
| !! | TTTACTTTATCATTGCAAAT+GGG | - | chr4_3:4790760-4790779 | Msa0625630:exon | 20.0% |
| !! | AGATTCTTATAACAGTAAAA+AGG | + | chr4_3:4790980-4790999 | None:intergenic | 20.0% |
| !!! | TATCTTCTTTTAATACTTTC+GGG | + | chr4_3:4791235-4791254 | None:intergenic | 20.0% |
| !! | ACAACATTAGAGATTTAAAA+TGG | + | chr4_3:4791341-4791360 | None:intergenic | 20.0% |
| !!! | TTCTTTGAATCTGAATTTTT+AGG | - | chr4_3:4791415-4791434 | Msa0625630:CDS | 20.0% |
| !!! | TCAGTTAGTAATTTTGTTTT+TGG | - | chr4_3:4791982-4792001 | Msa0625630:CDS | 20.0% |
| !!! | TGTATATAAATTTTCGTAGT+AGG | + | chr4_3:4792808-4792827 | None:intergenic | 20.0% |
| !! | TTACTCTTTTCACAAATTCA+TGG | - | chr4_3:4790689-4790708 | Msa0625630:three_prime_UTR | 25.0% |
| ! | CTTTACTTTATCATTGCAAA+TGG | - | chr4_3:4790759-4790778 | Msa0625630:exon | 25.0% |
| ! | TTACTTTATCATTGCAAATG+GGG | - | chr4_3:4790761-4790780 | Msa0625630:exon | 25.0% |
| !! | ATCTTCTTTTAATACTTTCG+GGG | + | chr4_3:4791234-4791253 | None:intergenic | 25.0% |
| ! | TATTATCTTGGAAATGAGAA+AGG | - | chr4_3:4791377-4791396 | Msa0625630:CDS | 25.0% |
| !!! | TGAATCTGAATTTTTAGGAA+AGG | - | chr4_3:4791420-4791439 | Msa0625630:CDS | 25.0% |
| ! | AAATTTATACCAGAAGCTAA+TGG | + | chr4_3:4791631-4791650 | None:intergenic | 25.0% |
| !! | ATTAGCTTCTGGTATAAATT+TGG | - | chr4_3:4791630-4791649 | Msa0625630:CDS | 25.0% |
| ! | TTAAACTACATTGTGACAAT+AGG | - | chr4_3:4791658-4791677 | Msa0625630:CDS | 25.0% |
| ! | ATTGCATAGTAATGAGTTAT+AGG | + | chr4_3:4791809-4791828 | None:intergenic | 25.0% |
| !! | CTGTAGTAAATTGAAGATTT+TGG | + | chr4_3:4791843-4791862 | None:intergenic | 25.0% |
| ! | CAAAATCTTCAATTTACTAC+AGG | - | chr4_3:4791841-4791860 | Msa0625630:CDS | 25.0% |
| ! | TGTAACTACACTGTTAATTA+TGG | - | chr4_3:4791901-4791920 | Msa0625630:CDS | 25.0% |
| !!! | AGTAATTTTGTTTTTGGTTG+TGG | - | chr4_3:4791988-4792007 | Msa0625630:CDS | 25.0% |
| AATGGAAGTAGTAAGAAAGA+AGG | + | chr4_3:4790649-4790668 | None:intergenic | 30.0% | |
| TACTTTATCATTGCAAATGG+GGG | - | chr4_3:4790762-4790781 | Msa0625630:exon | 30.0% | |
| ! | AACCATCAATTTGGTTCAAA+GGG | - | chr4_3:4790831-4790850 | Msa0625630:CDS | 30.0% |
| !! | TGATGGGTGTTTTCTATAAA+GGG | + | chr4_3:4791017-4791036 | None:intergenic | 30.0% |
| !!! | ATGATGGGTGTTTTCTATAA+AGG | + | chr4_3:4791018-4791037 | None:intergenic | 30.0% |
| TTATAGAAAACACCCATCAT+TGG | - | chr4_3:4791018-4791037 | Msa0625630:CDS | 30.0% | |
| ACAGATAAGAAACCAATGAT+GGG | + | chr4_3:4791033-4791052 | None:intergenic | 30.0% | |
| CTCATAGTTTACTGATAAGT+GGG | + | chr4_3:4791207-4791226 | None:intergenic | 30.0% | |
| ACTCATAGTTTACTGATAAG+TGG | + | chr4_3:4791208-4791227 | None:intergenic | 30.0% | |
| ! | GTTCATAAGTGCTATTATCT+TGG | - | chr4_3:4791365-4791384 | Msa0625630:CDS | 30.0% |
| !! | GAATTTTTAGGAAAGGAGAA+AGG | - | chr4_3:4791427-4791446 | Msa0625630:CDS | 30.0% |
| GCTCAAAGAGGAAAATTAAT+TGG | - | chr4_3:4791485-4791504 | Msa0625630:CDS | 30.0% | |
| TACATTGTGACAATAGGATT+GGG | - | chr4_3:4791664-4791683 | Msa0625630:CDS | 30.0% | |
| TGACTATAACATGACATACA+AGG | + | chr4_3:4791751-4791770 | None:intergenic | 30.0% | |
| ATGTCATGTTATAGTCAACA+AGG | - | chr4_3:4791754-4791773 | Msa0625630:CDS | 30.0% | |
| TAGTAATGAGTTATAGGAAG+AGG | + | chr4_3:4791803-4791822 | None:intergenic | 30.0% | |
| TACACTGTTAATTATGGTGA+TGG | - | chr4_3:4791907-4791926 | Msa0625630:CDS | 30.0% | |
| !!! | ATTTTGTTTTTGGTTGTGGT+AGG | - | chr4_3:4791992-4792011 | Msa0625630:CDS | 30.0% |
| AGGAACAACAAAGGTTTATT+TGG | - | chr4_3:4792012-4792031 | Msa0625630:CDS | 30.0% | |
| AACAACAAAGGTTTATTTGG+CGG | - | chr4_3:4792015-4792034 | Msa0625630:CDS | 30.0% | |
| ! | TGGTTTGAGATATCATTGAT+AGG | + | chr4_3:4792074-4792093 | None:intergenic | 30.0% |
| TCTCAAACCAATACTACATT+TGG | - | chr4_3:4792084-4792103 | Msa0625630:intron | 30.0% | |
| !! | TTTAAAGCATTGTAGAGTGA+TGG | + | chr4_3:4792363-4792382 | None:intergenic | 30.0% |
| ATCACTCTACAATGCTTTAA+AGG | - | chr4_3:4792362-4792381 | Msa0625630:intron | 30.0% | |
| !!! | GAGTTTTTGAAACAGTTTTC+TGG | - | chr4_3:4792387-4792406 | Msa0625630:intron | 30.0% |
| ATACATGTTTCAATCTGACT+GGG | - | chr4_3:4792442-4792461 | Msa0625630:intron | 30.0% | |
| TCAAAATGCATACTTAAGGT+AGG | + | chr4_3:4792486-4792505 | None:intergenic | 30.0% | |
| GTTCTCAAAATGCATACTTA+AGG | + | chr4_3:4792490-4792509 | None:intergenic | 30.0% | |
| ! | CAAACTTGTGAAACATCTTT+TGG | + | chr4_3:4792555-4792574 | None:intergenic | 30.0% |
| ! | AGATGTTTCACAAGTTTGTT+TGG | - | chr4_3:4792557-4792576 | Msa0625630:intron | 30.0% |
| TCTTTCTGATGAAAATGACA+TGG | - | chr4_3:4792590-4792609 | Msa0625630:intron | 30.0% | |
| ! | AAATCCAATTTTGGACTGTT+TGG | + | chr4_3:4792664-4792683 | None:intergenic | 30.0% |
| ! | ATTTTCGTAGTAGGAATAAC+TGG | + | chr4_3:4792799-4792818 | None:intergenic | 30.0% |
| !! | CTATGTTTAGCCTTATAACA+TGG | - | chr4_3:4792835-4792854 | Msa0625630:CDS | 30.0% |
| TATGCTAGTACCATGTTATA+AGG | + | chr4_3:4792848-4792867 | None:intergenic | 30.0% | |
| ACATTCTAACGACTAATGAA+GGG | + | chr4_3:4792984-4793003 | None:intergenic | 30.0% | |
| TACATTCTAACGACTAATGA+AGG | + | chr4_3:4792985-4793004 | None:intergenic | 30.0% | |
| TTGTGCATGAGGAATTATTG+GGG | + | chr4_3:4790524-4790543 | None:intergenic | 35.0% | |
| CTTGTGCATGAGGAATTATT+GGG | + | chr4_3:4790525-4790544 | None:intergenic | 35.0% | |
| ACTTGTGCATGAGGAATTAT+TGG | + | chr4_3:4790526-4790545 | None:intergenic | 35.0% | |
| AATAATTCCTCATGCACAAG+TGG | - | chr4_3:4790525-4790544 | Msa0625630:three_prime_UTR | 35.0% | |
| ATAATTCCTCATGCACAAGT+GGG | - | chr4_3:4790526-4790545 | Msa0625630:three_prime_UTR | 35.0% | |
| ATTTGGCATGAGAACAAAAG+AGG | + | chr4_3:4790571-4790590 | None:intergenic | 35.0% | |
| TCAAAGTGCAAATGTTGCAA+AGG | - | chr4_3:4790808-4790827 | Msa0625630:CDS | 35.0% | |
| TTGCAAAGGAACCATCAATT+TGG | - | chr4_3:4790822-4790841 | Msa0625630:CDS | 35.0% | |
| ! | GAACCATCAATTTGGTTCAA+AGG | - | chr4_3:4790830-4790849 | Msa0625630:CDS | 35.0% |
| AACCCTTTGAACCAAATTGA+TGG | + | chr4_3:4790836-4790855 | None:intergenic | 35.0% | |
| TGCTAAACTCACTTGATTCT+GGG | + | chr4_3:4790866-4790885 | None:intergenic | 35.0% | |
| GACAGATAAGAAACCAATGA+TGG | + | chr4_3:4791034-4791053 | None:intergenic | 35.0% | |
| GTAACCTTACCTTTGAATCA+GGG | + | chr4_3:4791090-4791109 | None:intergenic | 35.0% | |
| TGTAACCTTACCTTTGAATC+AGG | + | chr4_3:4791091-4791110 | None:intergenic | 35.0% | |
| AACACGCGATATTACAAGTT+CGG | - | chr4_3:4791133-4791152 | Msa0625630:CDS | 35.0% | |
| TGCTATTATCCTGGAAATGA+AGG | - | chr4_3:4791450-4791469 | Msa0625630:CDS | 35.0% | |
| ATAGAGGTTATTGCTCAAAG+AGG | - | chr4_3:4791473-4791492 | Msa0625630:CDS | 35.0% | |
| ! | ATCCAAATTCCATTAGCTTC+TGG | - | chr4_3:4791619-4791638 | Msa0625630:CDS | 35.0% |
| TACCAGAAGCTAATGGAATT+TGG | + | chr4_3:4791624-4791643 | None:intergenic | 35.0% | |
| CTACATTGTGACAATAGGAT+TGG | - | chr4_3:4791663-4791682 | Msa0625630:CDS | 35.0% | |
| ATGACTGTGATAATCGATAC+CGG | - | chr4_3:4791697-4791716 | Msa0625630:CDS | 35.0% | |
| ATGACATACAAGGATCACAT+TGG | + | chr4_3:4791741-4791760 | None:intergenic | 35.0% | |
| TATAGGAAGAGGAGTTAGAA+GGG | + | chr4_3:4791792-4791811 | None:intergenic | 35.0% | |
| TTATAGGAAGAGGAGTTAGA+AGG | + | chr4_3:4791793-4791812 | None:intergenic | 35.0% | |
| ACAGTGTAGTTACAACTAGA+TGG | + | chr4_3:4791895-4791914 | None:intergenic | 35.0% | |
| CTGAAATACCTCCAAAACTA+AGG | + | chr4_3:4791966-4791985 | None:intergenic | 35.0% | |
| TCTTCCTAATCCCATTATAC+CGG | + | chr4_3:4792046-4792065 | None:intergenic | 35.0% | |
| CAAACCAATACTACATTTGG+AGG | - | chr4_3:4792087-4792106 | Msa0625630:intron | 35.0% | |
| AACTCCTCCAAATGTAGTAT+TGG | + | chr4_3:4792094-4792113 | None:intergenic | 35.0% | |
| TGTTTACCAACAACAGATAG+TGG | - | chr4_3:4792123-4792142 | Msa0625630:intron | 35.0% | |
| ACATAAAAGTTTGACAGCTG+TGG | + | chr4_3:4792234-4792253 | None:intergenic | 35.0% | |
| ! | TTTTATGTACTCAACCTCAC+CGG | - | chr4_3:4792246-4792265 | Msa0625630:intron | 35.0% |
| GCTATACAAGATACAAGCTT+TGG | - | chr4_3:4792288-4792307 | Msa0625630:intron | 35.0% | |
| GATACATGTTTCAATCTGAC+TGG | - | chr4_3:4792441-4792460 | Msa0625630:intron | 35.0% | |
| GAACAATGTTGATCTGAATG+TGG | - | chr4_3:4792506-4792525 | Msa0625630:intron | 35.0% | |
| AAAATGACATGGCCATCATT+GGG | - | chr4_3:4792601-4792620 | Msa0625630:intron | 35.0% | |
| TTGCTGATAATTCCCAATGA+TGG | + | chr4_3:4792616-4792635 | None:intergenic | 35.0% | |
| TCATTGGGAATTATCAGCAA+AGG | - | chr4_3:4792616-4792635 | Msa0625630:CDS | 35.0% | |
| ATTATCAGCAAAGGAATCAG+AGG | - | chr4_3:4792625-4792644 | Msa0625630:CDS | 35.0% | |
| TTATCAGCAAAGGAATCAGA+GGG | - | chr4_3:4792626-4792645 | Msa0625630:CDS | 35.0% | |
| AGTCCAAAATTGGATTTGCA+AGG | - | chr4_3:4792667-4792686 | Msa0625630:CDS | 35.0% | |
| GTCCAAAATTGGATTTGCAA+GGG | - | chr4_3:4792668-4792687 | Msa0625630:CDS | 35.0% | |
| ! | TTCCCTTGCAAATCCAATTT+TGG | + | chr4_3:4792673-4792692 | None:intergenic | 35.0% |
| GCTATACTAGATGTCTTACA+TGG | - | chr4_3:4792723-4792742 | Msa0625630:CDS | 35.0% | |
| ACATGGTACTAGCATAAGAA+TGG | - | chr4_3:4792852-4792871 | Msa0625630:CDS | 35.0% | |
| GCATAAGAATGGCATTTATC+AGG | - | chr4_3:4792863-4792882 | Msa0625630:CDS | 35.0% | |
| TCCTAGGTATATTGTTGTGT+TGG | - | chr4_3:4792889-4792908 | Msa0625630:exon | 35.0% | |
| TAATTCCTCATGCACAAGTG+GGG | - | chr4_3:4790527-4790546 | Msa0625630:three_prime_UTR | 40.0% | |
| ! | AGATTCTGAGTGGTGGAATT+TGG | + | chr4_3:4790588-4790607 | None:intergenic | 40.0% |
| AAAAGAGAGGAGATTCTGAG+TGG | + | chr4_3:4790598-4790617 | None:intergenic | 40.0% | |
| TAAACTCACTTGATTCTGGG+AGG | + | chr4_3:4790863-4790882 | None:intergenic | 40.0% | |
| CTGCTAAACTCACTTGATTC+TGG | + | chr4_3:4790867-4790886 | None:intergenic | 40.0% | |
| GAATAGCAACCCTGATTCAA+AGG | - | chr4_3:4791078-4791097 | Msa0625630:CDS | 40.0% | |
| ATCCTGGAAATGAAGGATAG+AGG | - | chr4_3:4791457-4791476 | Msa0625630:CDS | 40.0% | |
| AACCTCTATCCTTCATTTCC+AGG | + | chr4_3:4791462-4791481 | None:intergenic | 40.0% | |
| ATACCGGAAGTGACTTAACA+TGG | - | chr4_3:4791713-4791732 | Msa0625630:CDS | 40.0% | |
| TACCGGAAGTGACTTAACAT+GGG | - | chr4_3:4791714-4791733 | Msa0625630:CDS | 40.0% | |
| GAGTTAGAAGGGTTGAAAAC+AGG | + | chr4_3:4791781-4791800 | None:intergenic | 40.0% | |
| !! | GGTGATGGATCATTTACTGA+TGG | - | chr4_3:4791922-4791941 | Msa0625630:CDS | 40.0% |
| TCATTTACTGATGGAGAGCT+AGG | - | chr4_3:4791931-4791950 | Msa0625630:CDS | 40.0% | |
| !! | GGTGTTGAACACCTTAGTTT+TGG | - | chr4_3:4791952-4791971 | Msa0625630:CDS | 40.0% |
| !!! | GTTGAACACCTTAGTTTTGG+AGG | - | chr4_3:4791955-4791974 | Msa0625630:CDS | 40.0% |
| ! | GTTTCCGGTATAATGGGATT+AGG | - | chr4_3:4792039-4792058 | Msa0625630:intron | 40.0% |
| !! | GCTTCTGGTTCGTTAGTTAT+AGG | - | chr4_3:4792147-4792166 | Msa0625630:intron | 40.0% |
| AGTTATAGGTAACGAGTCGT+CGG | - | chr4_3:4792161-4792180 | Msa0625630:intron | 40.0% | |
| TCCAATTGCTTACACCAGTA+TGG | - | chr4_3:4792200-4792219 | Msa0625630:intron | 40.0% | |
| ACCATACTGGTGTAAGCAAT+TGG | + | chr4_3:4792204-4792223 | None:intergenic | 40.0% | |
| ! | CAAGATACAAGCTTTGGCAA+CGG | - | chr4_3:4792294-4792313 | Msa0625630:intron | 40.0% |
| !! | CATTCTAATTGATTCGGGGA+CGG | - | chr4_3:4792320-4792339 | Msa0625630:intron | 40.0% |
| ! | GTATCCAAAATTGAAAGCGC+TGG | + | chr4_3:4792426-4792445 | None:intergenic | 40.0% |
| TTTCAATCTGACTGGGATTG+AGG | - | chr4_3:4792449-4792468 | Msa0625630:intron | 40.0% | |
| GAAAATGACATGGCCATCAT+TGG | - | chr4_3:4792600-4792619 | Msa0625630:intron | 40.0% | |
| GATGCCAAACAGTCCAAAAT+TGG | - | chr4_3:4792657-4792676 | Msa0625630:CDS | 40.0% | |
| ! | GGCATTTATCAGGTTTTCCT+AGG | - | chr4_3:4792873-4792892 | Msa0625630:CDS | 40.0% |
| GCCAACACAACAATATACCT+AGG | + | chr4_3:4792893-4792912 | None:intergenic | 40.0% | |
| GAGTGAGAGAGGAAAAAGAG+AGG | + | chr4_3:4790611-4790630 | None:intergenic | 45.0% | |
| TTTGAGAGTGAGAGTGAGAG+AGG | + | chr4_3:4790622-4790641 | None:intergenic | 45.0% | |
| GCAACCCTGATTCAAAGGTA+AGG | - | chr4_3:4791083-4791102 | Msa0625630:CDS | 45.0% | |
| !! | GGAGAAAGGTGCTATTATCC+TGG | - | chr4_3:4791441-4791460 | Msa0625630:CDS | 45.0% |
| GCGTTCGTTCAATGCAAAAC+AGG | - | chr4_3:4791548-4791567 | Msa0625630:CDS | 45.0% | |
| GCAAAACAGGATTCGAGCAA+AGG | - | chr4_3:4791561-4791580 | Msa0625630:CDS | 45.0% | |
| GACCCATGTTAAGTCACTTC+CGG | + | chr4_3:4791719-4791738 | None:intergenic | 45.0% | |
| GGTTGTGGTAGGAACAACAA+AGG | - | chr4_3:4792003-4792022 | Msa0625630:CDS | 45.0% | |
| GGTTTATTTGGCGGAGTTTC+CGG | - | chr4_3:4792024-4792043 | Msa0625630:CDS | 45.0% | |
| GAAGCTCCACTATCTGTTGT+TGG | + | chr4_3:4792132-4792151 | None:intergenic | 45.0% | |
| !! | ACAACAGATAGTGGAGCTTC+TGG | - | chr4_3:4792132-4792151 | Msa0625630:intron | 45.0% |
| CTGTGGATTCGAAACCATAC+TGG | + | chr4_3:4792217-4792236 | None:intergenic | 45.0% | |
| CGGCGGCATTCTAATTGATT+CGG | - | chr4_3:4792314-4792333 | Msa0625630:intron | 45.0% | |
| ! | GGCGGCATTCTAATTGATTC+GGG | - | chr4_3:4792315-4792334 | Msa0625630:intron | 45.0% |
| !! | GCGGCATTCTAATTGATTCG+GGG | - | chr4_3:4792316-4792335 | Msa0625630:intron | 45.0% |
| ! | TGCACCAGCGCTTTCAATTT+TGG | - | chr4_3:4792419-4792438 | Msa0625630:intron | 45.0% |
| GATCTGAATGTGGATGCAGT+TGG | - | chr4_3:4792516-4792535 | Msa0625630:intron | 45.0% | |
| GTATACCCCACTTGTGCATG+AGG | + | chr4_3:4790535-4790554 | None:intergenic | 50.0% | |
| AGAGAGGAGATTCTGAGTGG+TGG | + | chr4_3:4790595-4790614 | None:intergenic | 50.0% | |
| CGCTCAAGCTGGCGAAAAAA+AGG | + | chr4_3:4791179-4791198 | None:intergenic | 50.0% | |
| AGGATTCGAGCAAAGGTCAC+TGG | - | chr4_3:4791568-4791587 | Msa0625630:CDS | 50.0% | |
| TGGCGGAGTTTCCGGTATAA+TGG | - | chr4_3:4792032-4792051 | Msa0625630:intron | 50.0% | |
| GGCGGAGTTTCCGGTATAAT+GGG | - | chr4_3:4792033-4792052 | Msa0625630:intron | 50.0% | |
| AACCTCACCGGCATAGATGT+TGG | - | chr4_3:4792258-4792277 | Msa0625630:intron | 50.0% | |
| CACACCACCAACATCTATGC+CGG | + | chr4_3:4792268-4792287 | None:intergenic | 50.0% | |
| ! | GATACAAGCTTTGGCAACGG+CGG | - | chr4_3:4792297-4792316 | Msa0625630:intron | 50.0% |
| !! | TTGAAAGCGCTGGTGCAGTA+GGG | + | chr4_3:4792416-4792435 | None:intergenic | 50.0% |
| !! | ATTGAAAGCGCTGGTGCAGT+AGG | + | chr4_3:4792417-4792436 | None:intergenic | 50.0% |
| CACCAACATCTATGCCGGTG+AGG | + | chr4_3:4792263-4792282 | None:intergenic | 55.0% | |
| CTCACCGGCATAGATGTTGG+TGG | - | chr4_3:4792261-4792280 | Msa0625630:intron | 55.0% | |
| !! | CGGCATAGATGTTGGTGGTG+TGG | - | chr4_3:4792266-4792285 | Msa0625630:intron | 55.0% |
| AGTGGGCAGTTCGCTCAAGC+TGG | + | chr4_3:4791190-4791209 | None:intergenic | 60.0% | |
| GGGGACGGTGATCACGAGAC+TGG | - | chr4_3:4792335-4792354 | Msa0625630:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 4790481 | 4793005 | 4790481 | ID=Msa0625630;Name=Msa0625630 |
| chr4_3 | mRNA | 4790481 | 4793005 | 4790481 | ID=Msa0625630-mRNA-1;Parent=Msa0625630;Name=Msa0625630-mRNA-1;_AED=0.00;_eAED=0.00;_QI=101|1|1|1|1|1|2|295|521 |
| chr4_3 | exon | 4790481 | 4792049 | 4790481 | ID=Msa0625630-mRNA-1:exon:1347;Parent=Msa0625630-mRNA-1 |
| chr4_3 | exon | 4792613 | 4793005 | 4792613 | ID=Msa0625630-mRNA-1:exon:1346;Parent=Msa0625630-mRNA-1 |
| chr4_3 | five_prime_UTR | 4792905 | 4793005 | 4792905 | ID=Msa0625630-mRNA-1:five_prime_utr;Parent=Msa0625630-mRNA-1 |
| chr4_3 | CDS | 4792613 | 4792904 | 4792613 | ID=Msa0625630-mRNA-1:cds;Parent=Msa0625630-mRNA-1 |
| chr4_3 | CDS | 4790776 | 4792049 | 4790776 | ID=Msa0625630-mRNA-1:cds;Parent=Msa0625630-mRNA-1 |
| chr4_3 | three_prime_UTR | 4790481 | 4790775 | 4790481 | ID=Msa0625630-mRNA-1:three_prime_utr;Parent=Msa0625630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
