Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0856090 | RHN56857.1 | 99.130 | 460 | 3 | 1 | 1 | 459 | 1 | 460 | 0.0 | 923 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0856090 | sp|Q8RWB1|SRL1_ARATH | 72.378 | 286 | 50 | 3 | 2 | 286 | 3 | 260 | 8.06e-145 | 422 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0856090 | A0A396I1Y9 | 99.130 | 460 | 3 | 1 | 1 | 459 | 1 | 460 | 0.0 | 923 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030300 | Msa0856090 | 0.800094 | 1.693338e-48 | -8.615850e-47 |
| Msa0038000 | Msa0856090 | 0.826043 | 3.369189e-54 | -8.615850e-47 |
| Msa0038440 | Msa0856090 | 0.820770 | 5.753176e-53 | -8.615850e-47 |
| Msa0052860 | Msa0856090 | 0.824173 | 9.318098e-54 | -8.615850e-47 |
| Msa0620330 | Msa0856090 | 0.841946 | 3.490752e-58 | -8.615850e-47 |
| Msa0647930 | Msa0856090 | 0.820133 | 8.056235e-53 | -8.615850e-47 |
| Msa0647950 | Msa0856090 | 0.819876 | 9.224028e-53 | -8.615850e-47 |
| Msa0694840 | Msa0856090 | 0.801454 | 8.935529e-49 | -8.615850e-47 |
| Msa0736570 | Msa0856090 | 0.832696 | 8.156823e-56 | -8.615850e-47 |
| Msa0737800 | Msa0856090 | 0.811356 | 7.293834e-51 | -8.615850e-47 |
| Msa0743530 | Msa0856090 | 0.801206 | 1.004434e-48 | -8.615850e-47 |
| Msa0748430 | Msa0856090 | 0.800006 | 1.764671e-48 | -8.615850e-47 |
| Msa0796440 | Msa0856090 | 0.802515 | 5.409738e-49 | -8.615850e-47 |
| Msa0817260 | Msa0856090 | 0.806264 | 8.950475e-50 | -8.615850e-47 |
| Msa0817270 | Msa0856090 | 0.807898 | 4.037190e-50 | -8.615850e-47 |
| Msa0822180 | Msa0856090 | 0.800760 | 1.238877e-48 | -8.615850e-47 |
| Msa0823500 | Msa0856090 | 0.818158 | 2.267791e-52 | -8.615850e-47 |
| Msa0831150 | Msa0856090 | 0.803112 | 4.072879e-49 | -8.615850e-47 |
| Msa0132830 | Msa0856090 | 0.824001 | 1.022430e-53 | -8.615850e-47 |
| Msa0165970 | Msa0856090 | 0.813306 | 2.736814e-51 | -8.615850e-47 |
| Msa0197610 | Msa0856090 | 0.801240 | 9.884691e-49 | -8.615850e-47 |
| Msa0198530 | Msa0856090 | 0.802461 | 5.550336e-49 | -8.615850e-47 |
| Msa0202930 | Msa0856090 | 0.800857 | 1.183671e-48 | -8.615850e-47 |
| Msa0439890 | Msa0856090 | 0.822634 | 2.132360e-53 | -8.615850e-47 |
| Msa0259270 | Msa0856090 | 0.806045 | 9.954823e-50 | -8.615850e-47 |
| Msa0284450 | Msa0856090 | 0.810520 | 1.106742e-50 | -8.615850e-47 |
| Msa0285330 | Msa0856090 | 0.809075 | 2.263360e-50 | -8.615850e-47 |
| Msa0307560 | Msa0856090 | 0.810395 | 1.177562e-50 | -8.615850e-47 |
| Msa0314230 | Msa0856090 | 0.806590 | 7.641268e-50 | -8.615850e-47 |
| Msa0316940 | Msa0856090 | 0.818859 | 1.573445e-52 | -8.615850e-47 |
| Msa0324240 | Msa0856090 | 0.801652 | 8.139214e-49 | -8.615850e-47 |
| Msa0541260 | Msa0856090 | 0.806289 | 8.841602e-50 | -8.615850e-47 |
| Msa0566350 | Msa0856090 | 0.804792 | 1.822551e-49 | -8.615850e-47 |
| Msa0856090 | Msa0862500 | 0.819207 | 1.310705e-52 | -8.615850e-47 |
| Msa0856090 | Msa0881580 | 0.806941 | 6.441406e-50 | -8.615850e-47 |
| Msa0856090 | Msa0899350 | 0.804807 | 1.809130e-49 | -8.615850e-47 |
| Msa0856090 | Msa0957870 | 0.809539 | 1.799694e-50 | -8.615850e-47 |
| Msa0856090 | Msa0957970 | 0.807733 | 4.376657e-50 | -8.615850e-47 |
| Msa0856090 | Msa0965020 | 0.802882 | 4.542845e-49 | -8.615850e-47 |
| Msa0856090 | Msa1128330 | 0.827602 | 1.429116e-54 | -8.615850e-47 |
| Msa0856090 | Msa1164020 | 0.802851 | 4.610932e-49 | -8.615850e-47 |
| Msa0856090 | Msa1182670 | 0.817735 | 2.826231e-52 | -8.615850e-47 |
| Msa0856090 | Msa1203880 | 0.808249 | 3.398341e-50 | -8.615850e-47 |
| Msa0856090 | Msa1230040 | 0.828291 | 9.756762e-55 | -8.615850e-47 |
| Msa0856090 | Msa1376130 | 0.802453 | 5.570521e-49 | -8.615850e-47 |
| Msa0856090 | Msa1377570 | 0.800506 | 1.396086e-48 | -8.615850e-47 |
| Msa0856090 | Msa1388860 | 0.809843 | 1.548259e-50 | -8.615850e-47 |
| Msa0856090 | Msa1396870 | 0.816668 | 4.910351e-52 | -8.615850e-47 |
| Msa0856090 | Msa1407190 | 0.802057 | 6.720093e-49 | -8.615850e-47 |
| Msa0856090 | Msa1416260 | 0.806751 | 7.063524e-50 | -8.615850e-47 |
| Msa0856090 | Msa1432130 | 0.811240 | 7.728595e-51 | -8.615850e-47 |
| Msa0856090 | Msa1435770 | 0.821782 | 3.362480e-53 | -8.615850e-47 |
| Msa0856090 | Msa1442790 | 0.824274 | 8.819761e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0856090 | MtrunA17_Chr5g0434011 | 99.130 | 460 | 3 | 1 | 1 | 459 | 1 | 460 | 0.0 | 923 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0856090 | AT5G37370.1 | 72.378 | 286 | 50 | 3 | 2 | 286 | 3 | 260 | 8.19e-146 | 422 |
| Msa0856090 | AT5G37370.2 | 70.280 | 286 | 48 | 3 | 2 | 286 | 3 | 252 | 8.05e-140 | 406 |
| Msa0856090 | AT5G37370.4 | 69.099 | 233 | 43 | 3 | 55 | 286 | 1 | 205 | 1.76e-108 | 325 |
| Msa0856090 | AT5G37370.8 | 89.583 | 96 | 10 | 0 | 2 | 97 | 3 | 98 | 2.88e-59 | 190 |
| Msa0856090 | AT5G37370.11 | 89.583 | 96 | 10 | 0 | 2 | 97 | 3 | 98 | 2.88e-59 | 190 |
| Msa0856090 | AT5G37370.3 | 88.542 | 96 | 11 | 0 | 2 | 97 | 3 | 98 | 4.15e-59 | 189 |
| Msa0856090 | AT5G37370.12 | 88.542 | 96 | 11 | 0 | 2 | 97 | 3 | 98 | 4.15e-59 | 189 |
| Msa0856090 | AT5G37370.10 | 89.474 | 95 | 10 | 0 | 2 | 96 | 3 | 97 | 5.21e-58 | 186 |
| Msa0856090 | AT5G37370.9 | 89.474 | 95 | 10 | 0 | 2 | 96 | 3 | 97 | 5.21e-58 | 186 |
| Msa0856090 | AT5G37370.6 | 58.710 | 155 | 35 | 3 | 133 | 286 | 1 | 127 | 4.09e-49 | 169 |
| Msa0856090 | AT5G37370.7 | 58.710 | 155 | 35 | 3 | 133 | 286 | 1 | 127 | 4.09e-49 | 169 |
| Msa0856090 | AT5G37370.5 | 58.710 | 155 | 35 | 3 | 133 | 286 | 1 | 127 | 4.09e-49 | 169 |
Find 175 sgRNAs with CRISPR-Local
Find 477 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCTCATCATCACATATTT+TGG | 0.108318 | 5_4:-50441033 | Msa0856090:CDS |
| ATGTATACTAAATTTATTTC+TGG | 0.164634 | 5_4:-50438671 | Msa0856090:three_prime_UTR |
| AACCAATCTCTTCGTGTAAT+TGG | 0.206631 | 5_4:-50445073 | Msa0856090:intron |
| AAAGATTTGTACGGTGATTT+AGG | 0.215552 | 5_4:-50438943 | Msa0856090:CDS |
| TCCCTGTCCCTATCCCTTTC+AGG | 0.221156 | 5_4:+50439363 | None:intergenic |
| GCTGCCCTTTCAGTCTCTTT+TGG | 0.266936 | 5_4:-50439519 | Msa0856090:CDS |
| TCACCACTATTATCCCTTCT+AGG | 0.271633 | 5_4:+50438886 | None:intergenic |
| TTAGACTTGGTGGCTCTTCT+TGG | 0.285751 | 5_4:-50438855 | Msa0856090:CDS |
| AACCAGCTCCACAGAGTCTT+TGG | 0.285766 | 5_4:+50442261 | None:intergenic |
| CACGTTCCCTATCCCTTTCT+CGG | 0.292416 | 5_4:+50439316 | None:intergenic |
| CTTGTGATGCACCTGGATTC+TGG | 0.297506 | 5_4:+50441074 | None:intergenic |
| GCTCTGACTGCGATGATTGC+TGG | 0.309396 | 5_4:+50439395 | None:intergenic |
| ACTTGGTTGACATAAGTTAT+AGG | 0.309738 | 5_4:-50438730 | Msa0856090:three_prime_UTR |
| TGATTCTGAGGCTTAGGTTT+GGG | 0.318766 | 5_4:+50445126 | None:intergenic |
| ACCTGACGCATTACAGGAAC+TGG | 0.327476 | 5_4:+50439651 | None:intergenic |
| GCCACAACCTGACGCATTAC+AGG | 0.330998 | 5_4:+50439645 | None:intergenic |
| GCGTCAGGTTGTGGCAAATC+TGG | 0.336533 | 5_4:-50439637 | Msa0856090:CDS |
| TTCTAATGTTGAATACCTTT+AGG | 0.346432 | 5_4:-50438534 | Msa0856090:three_prime_UTR |
| AAAGGGATAGGGAACGTGAT+AGG | 0.370047 | 5_4:-50439311 | Msa0856090:CDS |
| AGAGAAGTTATGATTATGAT+AGG | 0.373861 | 5_4:-50439176 | Msa0856090:CDS |
| GCTCTTATGTAAGGAGAATC+AGG | 0.377200 | 5_4:+50443695 | None:intergenic |
| ACAGGGAGCGGTCACGCTCC+AGG | 0.378200 | 5_4:-50439347 | Msa0856090:CDS |
| CCTTTCTCGGTCCCTGTCCC+TGG | 0.381415 | 5_4:+50439329 | None:intergenic |
| CATGGCGTGCGGTGCCAACT+TGG | 0.388924 | 5_4:+50439034 | None:intergenic |
| AGCGGTCACGCTCCAGGGAC+AGG | 0.394319 | 5_4:-50439341 | Msa0856090:CDS |
| TATATCCGTGATTTGCTCCT+TGG | 0.397027 | 5_4:-50441328 | Msa0856090:CDS |
| ACCGAGATGCTGAAAGATAC+AGG | 0.397891 | 5_4:-50439257 | Msa0856090:CDS |
| ATATCTCATCAATAACTTCA+TGG | 0.399120 | 5_4:+50443849 | None:intergenic |
| CTCTCGGTCCCTATCCCTCC+TGG | 0.402821 | 5_4:+50439197 | None:intergenic |
| CTGCTTGACAGTGAGCTTCA+TGG | 0.403160 | 5_4:+50443739 | None:intergenic |
| CTCGGTCCTTGTTCCTATCT+CGG | 0.405225 | 5_4:+50439274 | None:intergenic |
| CATTGCCTTTCATTATCACT+TGG | 0.408079 | 5_4:-50438747 | Msa0856090:three_prime_UTR |
| TTGATTCTGAGGCTTAGGTT+TGG | 0.410927 | 5_4:+50445125 | None:intergenic |
| GGGACAGATCCAGGAGGGAT+AGG | 0.413562 | 5_4:-50439206 | Msa0856090:CDS |
| ATCATGGAGATACAGACTTC+TGG | 0.414622 | 5_4:-50443962 | Msa0856090:CDS |
| TCCTGTAATGCGTCAGGTTG+TGG | 0.416923 | 5_4:-50439646 | Msa0856090:CDS |
| CCAGGGACAGGGACCGAGAA+AGG | 0.423524 | 5_4:-50439329 | Msa0856090:CDS |
| AAGTCTAAAACTTGCAAAGC+AGG | 0.424980 | 5_4:+50438636 | None:intergenic |
| CCGTGATTTGCTCCTTGGAC+AGG | 0.429155 | 5_4:-50441323 | Msa0856090:intron |
| TTCTTCACCCATTCGTCGTA+CGG | 0.437084 | 5_4:-50439463 | Msa0856090:CDS |
| CTCTGACTGCGATGATTGCT+GGG | 0.437763 | 5_4:+50439396 | None:intergenic |
| ACAGGGACCGAGAAAGGGAT+AGG | 0.439373 | 5_4:-50439323 | Msa0856090:CDS |
| TTCTCTAGCAAGGACTCAAT+TGG | 0.441660 | 5_4:+50443935 | None:intergenic |
| GTACTTTCTCTCTTCAGATA+CGG | 0.445057 | 5_4:-50445168 | Msa0856090:five_prime_UTR |
| CCCTGTATCTTTCAGCATCT+CGG | 0.447442 | 5_4:+50439256 | None:intergenic |
| ACAGGGATCGGGACCGGGAT+AGG | 0.448801 | 5_4:-50439239 | Msa0856090:CDS |
| ACCTCATCATCCTTTGCATA+TGG | 0.450018 | 5_4:+50442234 | None:intergenic |
| TACTTTCTCTCTTCAGATAC+GGG | 0.450037 | 5_4:-50445167 | Msa0856090:five_prime_UTR |
| ACATGGAAAGAATTCCTAGA+AGG | 0.450119 | 5_4:-50438900 | Msa0856090:CDS |
| ATCCAAAGACTCTGTGGAGC+TGG | 0.453230 | 5_4:-50442263 | Msa0856090:CDS |
| CCCAGTTCCTGTAATGCGTC+AGG | 0.457842 | 5_4:-50439652 | Msa0856090:CDS |
| GCTGTCTAGATGCAAATTGA+TGG | 0.467171 | 5_4:-50438445 | Msa0856090:three_prime_UTR |
| TACCAATTACACGAAGAGAT+TGG | 0.478209 | 5_4:+50445071 | None:intergenic |
| TGCCAACTTGGCTCTGACTT+CGG | 0.478380 | 5_4:+50439046 | None:intergenic |
| TTTAAAGCTAAAACTCCTAA+AGG | 0.479611 | 5_4:+50438519 | None:intergenic |
| GTGAATATCCTGAAAGGGAT+AGG | 0.479720 | 5_4:-50439371 | Msa0856090:CDS |
| AAAGATACAGGGATCGGGAC+CGG | 0.479933 | 5_4:-50439245 | Msa0856090:CDS |
| AGAAGACAGAAAGCAGTTGA+AGG | 0.479991 | 5_4:+50443776 | None:intergenic |
| CGCCACATCGAGCCTCTACA+AGG | 0.483631 | 5_4:-50439488 | Msa0856090:CDS |
| CTACATACCGCTCTTATGTA+AGG | 0.483855 | 5_4:+50443686 | None:intergenic |
| ACAGCATTGGCAATGGTAGT+AGG | 0.483968 | 5_4:-50439110 | Msa0856090:CDS |
| ACTATGAGAGGGACAGATCC+AGG | 0.484456 | 5_4:-50439215 | Msa0856090:CDS |
| ACAGATATTATGACCGAGAT+AGG | 0.486094 | 5_4:-50439287 | Msa0856090:CDS |
| ATCCTGAAAGGGATAGGGAC+AGG | 0.486555 | 5_4:-50439365 | Msa0856090:CDS |
| CTTTCACAGAAGGTGGTCTA+CGG | 0.486987 | 5_4:+50439541 | None:intergenic |
| GTTTGGGTAATCGAAAAGAA+TGG | 0.488048 | 5_4:+50445142 | None:intergenic |
| GGACAGATCCAGGAGGGATA+GGG | 0.488374 | 5_4:-50439205 | Msa0856090:CDS |
| TCTAGGAATTCTTTCCATGT+TGG | 0.493850 | 5_4:+50438903 | None:intergenic |
| GGTGAAGAGGTTATTAGACT+TGG | 0.496955 | 5_4:-50438868 | Msa0856090:CDS |
| TATCCCTTTCAGGATATTCA+CGG | 0.497547 | 5_4:+50439373 | None:intergenic |
| TTGCATTCTTGTGATGCACC+TGG | 0.498317 | 5_4:+50441067 | None:intergenic |
| ACGACATCAGATTATTGACT+TGG | 0.498873 | 5_4:+50438496 | None:intergenic |
| GTCGTACCACAATGTGTAGT+AGG | 0.500096 | 5_4:+50439600 | None:intergenic |
| CATGTGGAACCATGGATGAC+GGG | 0.500480 | 5_4:-50443812 | Msa0856090:CDS |
| GATAATGAAAGGCAATGAAA+AGG | 0.500868 | 5_4:+50438753 | None:intergenic |
| CAGGGATCGGGACCGGGATA+GGG | 0.504741 | 5_4:-50439238 | Msa0856090:CDS |
| CTCACTGTCAAGCAGATGCA+TGG | 0.508388 | 5_4:-50443731 | Msa0856090:CDS |
| GCAGGTACCGTACGACGAAT+GGG | 0.512160 | 5_4:+50439456 | None:intergenic |
| AGCAGGTACCGTACGACGAA+TGG | 0.515431 | 5_4:+50439455 | None:intergenic |
| GAAGAGGTTATTAGACTTGG+TGG | 0.517064 | 5_4:-50438865 | Msa0856090:CDS |
| TGCTGAAAGATACAGGGATC+GGG | 0.517734 | 5_4:-50439250 | Msa0856090:CDS |
| AAGGGATAGGGAACGTGATA+GGG | 0.519008 | 5_4:-50439310 | Msa0856090:CDS |
| ACGCAGAGAGAGAAAGTAGC+CGG | 0.520155 | 5_4:-50439143 | Msa0856090:CDS |
| AAGATACAGGGATCGGGACC+GGG | 0.522026 | 5_4:-50439244 | Msa0856090:CDS |
| GTCATCCGTCCATTAGATCC+AGG | 0.523423 | 5_4:+50441364 | None:intergenic |
| CGCTCTAGTCCACAGAGAGA+TGG | 0.529001 | 5_4:-50439006 | Msa0856090:CDS |
| CGACAGTTCCCCGTCATCCA+TGG | 0.535024 | 5_4:+50443803 | None:intergenic |
| AGCCGAAGTCAGAGCCAAGT+TGG | 0.536221 | 5_4:-50439048 | Msa0856090:CDS |
| ACTACACATTGTGGTACGAC+AGG | 0.536972 | 5_4:-50439597 | Msa0856090:CDS |
| AAAGGGATAGGGACAGGGAG+CGG | 0.538983 | 5_4:-50439359 | Msa0856090:CDS |
| TTTCACAGAAGGTGGTCTAC+GGG | 0.540490 | 5_4:+50439542 | None:intergenic |
| AGTGTCATCAGAACCGTGAC+GGG | 0.541768 | 5_4:+50439566 | None:intergenic |
| CCCTCTCATAGTCCCTATCC+CGG | 0.545144 | 5_4:+50439226 | None:intergenic |
| CATAATCATAACTTCTCTCT+CGG | 0.545819 | 5_4:+50439181 | None:intergenic |
| CAGGGAGCGGTCACGCTCCA+GGG | 0.545850 | 5_4:-50439346 | Msa0856090:CDS |
| GTCAACCAAGTGATAATGAA+AGG | 0.549160 | 5_4:+50438742 | None:intergenic |
| CGCAGAGAGAGAAAGTAGCC+GGG | 0.549213 | 5_4:-50439142 | Msa0856090:CDS |
| AAGGGATAATAGTGGTGAAG+AGG | 0.549270 | 5_4:-50438881 | Msa0856090:CDS |
| CAGGGACAGGGACCGAGAAA+GGG | 0.551544 | 5_4:-50439328 | Msa0856090:CDS |
| CAGGGACCGAGAAAGGGATA+GGG | 0.551648 | 5_4:-50439322 | Msa0856090:CDS |
| TGACAAAATTGTGTAACTGT+TGG | 0.551754 | 5_4:-50444015 | Msa0856090:five_prime_UTR |
| TGTGTAACTGTTGGAGTGAG+AGG | 0.551897 | 5_4:-50444006 | Msa0856090:five_prime_UTR |
| CTCCAAAATATGTGATGATG+AGG | 0.552372 | 5_4:+50441031 | None:intergenic |
| GAAGTTATGATTATGATAGG+AGG | 0.553854 | 5_4:-50439173 | Msa0856090:CDS |
| GAGCTCTACTACCAGAATCC+AGG | 0.555398 | 5_4:-50441085 | Msa0856090:CDS |
| GTCGGAGTAGAAGTAGGAGC+AGG | 0.556706 | 5_4:-50439071 | Msa0856090:CDS |
| GCGGTCACGCTCCAGGGACA+GGG | 0.556793 | 5_4:-50439340 | Msa0856090:CDS |
| CGGGATTATGACAACAGCAT+TGG | 0.559737 | 5_4:-50439123 | Msa0856090:CDS |
| AGAATGCTTGTATCTGATGC+CGG | 0.561175 | 5_4:-50438813 | Msa0856090:three_prime_UTR |
| GTAGTAGGCGCCATCACAGT+AGG | 0.563426 | 5_4:-50439095 | Msa0856090:CDS |
| GAGCCGTGAATATCCTGAAA+GGG | 0.564193 | 5_4:-50439376 | Msa0856090:CDS |
| GCTAAACTTAAAGATTTGTA+CGG | 0.567299 | 5_4:-50438952 | Msa0856090:CDS |
| CAATGCTGTTGTCATAATCC+CGG | 0.569029 | 5_4:+50439124 | None:intergenic |
| CATGGAAAGAATTCCTAGAA+GGG | 0.569552 | 5_4:-50438899 | Msa0856090:CDS |
| GCTGACCAAAAGAGACTGAA+AGG | 0.571040 | 5_4:+50439514 | None:intergenic |
| TGAATATCCTGAAAGGGATA+GGG | 0.572865 | 5_4:-50439370 | Msa0856090:CDS |
| GTAGGAGTCGGAGTAGAAGT+AGG | 0.573084 | 5_4:-50439077 | Msa0856090:CDS |
| TACTCCGACTCCTACTGTGA+TGG | 0.576524 | 5_4:+50439085 | None:intergenic |
| ATGCTGAAAGATACAGGGAT+CGG | 0.578326 | 5_4:-50439251 | Msa0856090:CDS |
| GCAAAGGACTTTCTCTAGCA+AGG | 0.583455 | 5_4:+50443925 | None:intergenic |
| GTGTAACTGTTGGAGTGAGA+GGG | 0.583469 | 5_4:-50444005 | Msa0856090:five_prime_UTR |
| GTGGACTAGAGCGTGAGTCA+TGG | 0.585031 | 5_4:+50439016 | None:intergenic |
| AGTCTAAAACTTGCAAAGCA+GGG | 0.585675 | 5_4:+50438637 | None:intergenic |
| TCGTACCACAATGTGTAGTA+GGG | 0.586324 | 5_4:+50439601 | None:intergenic |
| GGCGCCATCACAGTAGGAGT+CGG | 0.587535 | 5_4:-50439089 | Msa0856090:CDS |
| TTTCTCCTGGATCTAATGGA+CGG | 0.588245 | 5_4:-50441369 | Msa0856090:CDS |
| ATTCCTAGAAGGGATAATAG+TGG | 0.588421 | 5_4:-50438889 | Msa0856090:CDS |
| GAAAGGGCAGCTTTCACAGA+AGG | 0.590339 | 5_4:+50439531 | None:intergenic |
| ACCGGGATAGGGACTATGAG+AGG | 0.593083 | 5_4:-50439227 | Msa0856090:CDS |
| TTCTTACTTCCATCTCTCTG+TGG | 0.595516 | 5_4:+50438997 | None:intergenic |
| CTACACATTGTGGTACGACA+GGG | 0.597615 | 5_4:-50439596 | Msa0856090:CDS |
| ATGACAGAATATTCATGCAA+AGG | 0.601691 | 5_4:+50443909 | None:intergenic |
| TGGAGATACAGACTTCTGGC+AGG | 0.602465 | 5_4:-50443958 | Msa0856090:CDS |
| CTGACCAAAAGAGACTGAAA+GGG | 0.606327 | 5_4:+50439515 | None:intergenic |
| AAGCAAAGGAGATGCCAACA+TGG | 0.607508 | 5_4:-50438917 | Msa0856090:CDS |
| TATGACAACAGCATTGGCAA+TGG | 0.607613 | 5_4:-50439117 | Msa0856090:CDS |
| TCACTGTCAAGCAGATGCAT+GGG | 0.608557 | 5_4:-50443730 | Msa0856090:CDS |
| CCGAGATGCTGAAAGATACA+GGG | 0.609600 | 5_4:-50439256 | Msa0856090:CDS |
| TCCTGAAAGGGATAGGGACA+GGG | 0.610463 | 5_4:-50439364 | Msa0856090:CDS |
| CAGTGTCATCAGAACCGTGA+CGG | 0.611533 | 5_4:+50439565 | None:intergenic |
| AAAGATAACGAACCTGTCCA+AGG | 0.612596 | 5_4:+50441311 | None:intergenic |
| AGAGCCGTGAATATCCTGAA+AGG | 0.614212 | 5_4:-50439377 | Msa0856090:CDS |
| CTGGTTTGAGCCATATGCAA+AGG | 0.614974 | 5_4:-50442244 | Msa0856090:CDS |
| ATACAATCAAGTTGATCATG+TGG | 0.617743 | 5_4:-50443828 | Msa0856090:CDS |
| TCAACTGAACAATGGAAGCA+TGG | 0.617767 | 5_4:+50438585 | None:intergenic |
| AATGGACGGATGACTACGAT+GGG | 0.618551 | 5_4:-50441355 | Msa0856090:CDS |
| ACAGGGGAAACCACCCGTCA+CGG | 0.619623 | 5_4:-50439579 | Msa0856090:CDS |
| AGGGCAGCTTTCACAGAAGG+TGG | 0.621262 | 5_4:+50439534 | None:intergenic |
| CCTGTCCAAGGAGCAAATCA+CGG | 0.626413 | 5_4:+50441323 | None:intergenic |
| GCCATATGCAAAGGATGATG+AGG | 0.627558 | 5_4:-50442235 | Msa0856090:intron |
| TCATGTGGAACCATGGATGA+CGG | 0.627735 | 5_4:-50443813 | Msa0856090:CDS |
| TGTAACTGTTGGAGTGAGAG+GGG | 0.627998 | 5_4:-50444004 | Msa0856090:five_prime_UTR |
| TGGATGACGGGGAACTGTCG+TGG | 0.628076 | 5_4:-50443800 | Msa0856090:CDS |
| CTCTTATGTAAGGAGAATCA+GGG | 0.628997 | 5_4:+50443696 | None:intergenic |
| GGGTGAAGAATCCCTTGTAG+AGG | 0.636783 | 5_4:+50439476 | None:intergenic |
| AAGTTGATCATGTGGAACCA+TGG | 0.636947 | 5_4:-50443820 | Msa0856090:CDS |
| TAATGGACGGATGACTACGA+TGG | 0.637953 | 5_4:-50441356 | Msa0856090:CDS |
| ATTACAGGAACTGGGATGCG+AGG | 0.640293 | 5_4:+50439660 | None:intergenic |
| ACATAGTTTCAACTGAACAA+TGG | 0.642080 | 5_4:+50438577 | None:intergenic |
| CCTGACGCATTACAGGAACT+GGG | 0.642825 | 5_4:+50439652 | None:intergenic |
| ATGCTGATCCAAAGACTCTG+TGG | 0.643414 | 5_4:-50442269 | Msa0856090:CDS |
| AAACTCCCTACTACACATTG+TGG | 0.647894 | 5_4:-50439606 | Msa0856090:CDS |
| GTCATCAGAACCGTGACGGG+TGG | 0.647960 | 5_4:+50439569 | None:intergenic |
| ATGTGGAACCATGGATGACG+GGG | 0.653377 | 5_4:-50443811 | Msa0856090:CDS |
| CCGGGATAGGGACTATGAGA+GGG | 0.668727 | 5_4:-50439226 | Msa0856090:CDS |
| AGAGCGTGAGTCATGGCGTG+CGG | 0.670383 | 5_4:+50439023 | None:intergenic |
| TGAGAGGGACAGATCCAGGA+GGG | 0.674889 | 5_4:-50439211 | Msa0856090:CDS |
| TGATTCTCCTTACATAAGAG+CGG | 0.678807 | 5_4:-50443693 | Msa0856090:intron |
| TCCCTTGTAGAGGCTCGATG+TGG | 0.691841 | 5_4:+50439486 | None:intergenic |
| TGTCAAATGTTGACTCTCGG+CGG | 0.693107 | 5_4:+50444033 | None:intergenic |
| TACACATTGTGGTACGACAG+GGG | 0.693296 | 5_4:-50439595 | Msa0856090:CDS |
| TTATGACCGAGATAGGAACA+AGG | 0.707631 | 5_4:-50439280 | Msa0856090:CDS |
| GGTGATTTAGGTGAAAGCAA+AGG | 0.714464 | 5_4:-50438931 | Msa0856090:CDS |
| GCCACATCGAGCCTCTACAA+GGG | 0.725791 | 5_4:-50439487 | Msa0856090:CDS |
| ATGAGAGGGACAGATCCAGG+AGG | 0.739775 | 5_4:-50439212 | Msa0856090:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTAAATTCTTTTTATATG+CGG | + | chr5_4:50439144-50439163 | None:intergenic | 10.0% |
| !!! | AAAATTTAATTTTATCTATG+AGG | - | chr5_4:50441811-50441830 | Msa0856090:intron | 10.0% |
| !!! | AAATTTAATTTTATCTATGA+GGG | - | chr5_4:50441812-50441831 | Msa0856090:intron | 10.0% |
| !! | ATAAAATTAAAAAAGTAGAA+AGG | + | chr5_4:50443039-50443058 | None:intergenic | 10.0% |
| !! | TTTATTGGAAATTGTAAATT+GGG | + | chr5_4:50438582-50438601 | None:intergenic | 15.0% |
| !!! | TTTTATTGGAAATTGTAAAT+TGG | + | chr5_4:50438583-50438602 | None:intergenic | 15.0% |
| !! | ATTTACAATTTCCAATAAAA+AGG | - | chr5_4:50438583-50438602 | Msa0856090:three_prime_UTR | 15.0% |
| !! | TTTACAATTTCCAATAAAAA+GGG | - | chr5_4:50438584-50438603 | Msa0856090:three_prime_UTR | 15.0% |
| !! | AGAAAATTAACTACTAATAA+GGG | + | chr5_4:50438902-50438921 | None:intergenic | 15.0% |
| !! | AAGAAAATTAACTACTAATA+AGG | + | chr5_4:50438903-50438922 | None:intergenic | 15.0% |
| !!! | TACTTGTTTGATTTAAATTA+TGG | - | chr5_4:50440095-50440114 | Msa0856090:intron | 15.0% |
| !!! | ACTTGTTTGATTTAAATTAT+GGG | - | chr5_4:50440096-50440115 | Msa0856090:intron | 15.0% |
| !! | TTAAATAATCATGGATATTA+CGG | + | chr5_4:50440954-50440973 | None:intergenic | 15.0% |
| !! | CTAAAAGCTAAAATTAAAAA+AGG | + | chr5_4:50441169-50441188 | None:intergenic | 15.0% |
| !!! | CTTTTTTAATTTTAGCTTTT+AGG | - | chr5_4:50441167-50441186 | Msa0856090:intron | 15.0% |
| !! | AAAAACTTAATAAATGACAT+TGG | + | chr5_4:50441400-50441419 | None:intergenic | 15.0% |
| !!! | AATTTAATTTTATCTATGAG+GGG | - | chr5_4:50441813-50441832 | Msa0856090:intron | 15.0% |
| !! | TTTAAACATAATGACTTATA+AGG | - | chr5_4:50442396-50442415 | Msa0856090:intron | 15.0% |
| !! | TTTCAAATTTGATAAAATTG+AGG | - | chr5_4:50442949-50442968 | Msa0856090:intron | 15.0% |
| !! | TTCAAATTTGATAAAATTGA+GGG | - | chr5_4:50442950-50442969 | Msa0856090:intron | 15.0% |
| !! | TTTATTAAAAGAAGCAAATA+AGG | + | chr5_4:50443466-50443485 | None:intergenic | 15.0% |
| !!! | TCTTTTAATAAATACTACTT+AGG | - | chr5_4:50443474-50443493 | Msa0856090:intron | 15.0% |
| !!! | CTTTTAATAAATACTACTTA+GGG | - | chr5_4:50443475-50443494 | Msa0856090:intron | 15.0% |
| !! | ATGTATACTAAATTTATTTC+TGG | - | chr5_4:50444893-50444912 | Msa0856090:intron | 15.0% |
| !! | TTATTGGAAATTGTAAATTG+GGG | + | chr5_4:50438581-50438600 | None:intergenic | 20.0% |
| !!! | GAAAAAAAAACCCTTTTTAT+TGG | + | chr5_4:50438597-50438616 | None:intergenic | 20.0% |
| !! | AACGAAAGAAAATAAATCAT+GGG | + | chr5_4:50438624-50438643 | None:intergenic | 20.0% |
| !! | AAACGAAAGAAAATAAATCA+TGG | + | chr5_4:50438625-50438644 | None:intergenic | 20.0% |
| !!! | TGATTTATTTTCTTTCGTTT+AGG | - | chr5_4:50438625-50438644 | Msa0856090:three_prime_UTR | 20.0% |
| !!! | GATTTATTTTCTTTCGTTTA+GGG | - | chr5_4:50438626-50438645 | Msa0856090:three_prime_UTR | 20.0% |
| !! | AATTCAAATAGTAGAAAGAA+GGG | + | chr5_4:50438672-50438691 | None:intergenic | 20.0% |
| !!! | TTTGTTTTTTCTTTTGTTGT+AGG | - | chr5_4:50439479-50439498 | Msa0856090:CDS | 20.0% |
| !! | TAAATAATCATGGATATTAC+GGG | + | chr5_4:50440953-50440972 | None:intergenic | 20.0% |
| !! | CTAAAAGACTTAAATAATCA+TGG | + | chr5_4:50440963-50440982 | None:intergenic | 20.0% |
| !! | ACAAGATAAAATGGATATAA+GGG | + | chr5_4:50441219-50441238 | None:intergenic | 20.0% |
| !! | TCTAATTGTAAACTAAATAG+AGG | - | chr5_4:50441594-50441613 | Msa0856090:intron | 20.0% |
| !! | TACCAAAATCTTGATAAATT+TGG | + | chr5_4:50441979-50441998 | None:intergenic | 20.0% |
| !! | AAACAAATAACTATCTTTCA+TGG | + | chr5_4:50442035-50442054 | None:intergenic | 20.0% |
| !! | ATGAAAGATAGTTATTTGTT+TGG | - | chr5_4:50442034-50442053 | Msa0856090:intron | 20.0% |
| !! | TGAAAGATAGTTATTTGTTT+GGG | - | chr5_4:50442035-50442054 | Msa0856090:intron | 20.0% |
| !!! | TCGAATGAATATCTATTTTA+GGG | - | chr5_4:50442069-50442088 | Msa0856090:intron | 20.0% |
| !!! | TTTTTTTTTCCTTTTTACCA+CGG | - | chr5_4:50442661-50442680 | Msa0856090:intron | 20.0% |
| !!! | TGATCAAATTGTTAGATTTT+GGG | - | chr5_4:50442827-50442846 | Msa0856090:intron | 20.0% |
| !! | ATTAAAAAAGTAGAAAGGAA+TGG | + | chr5_4:50443034-50443053 | None:intergenic | 20.0% |
| !! | AAAAATGTTAAGGGAAATAT+AGG | + | chr5_4:50443281-50443300 | None:intergenic | 20.0% |
| !!! | ATTCAAACTTTTGATATTCT+TGG | - | chr5_4:50443339-50443358 | Msa0856090:intron | 20.0% |
| !! | TGATATTCTTGGTTTATAAA+AGG | - | chr5_4:50443350-50443369 | Msa0856090:intron | 20.0% |
| !!! | TAGACTTAATGATCATTTTA+TGG | - | chr5_4:50444944-50444963 | Msa0856090:intron | 20.0% |
| ! | TATTGGAAATTGTAAATTGG+GGG | + | chr5_4:50438580-50438599 | None:intergenic | 25.0% |
| ! | AAGAAAATAAATCATGGGAA+AGG | + | chr5_4:50438619-50438638 | None:intergenic | 25.0% |
| ! | ATTCAAATAGTAGAAAGAAG+GGG | + | chr5_4:50438671-50438690 | None:intergenic | 25.0% |
| ! | GAATTCAAATAGTAGAAAGA+AGG | + | chr5_4:50438673-50438692 | None:intergenic | 25.0% |
| !!! | ATAAGTTTTGTTTGACTGTT+TGG | - | chr5_4:50439050-50439069 | Msa0856090:CDS | 25.0% |
| !!! | TAAGTTTTGTTTGACTGTTT+GGG | - | chr5_4:50439051-50439070 | Msa0856090:CDS | 25.0% |
| ! | TTTACCATATGAGTTACATA+TGG | - | chr5_4:50439302-50439321 | Msa0856090:CDS | 25.0% |
| ! | TTACCATATGAGTTACATAT+GGG | - | chr5_4:50439303-50439322 | Msa0856090:CDS | 25.0% |
| ! | ATAGAAGAACATAATAGAAC+TGG | + | chr5_4:50439425-50439444 | None:intergenic | 25.0% |
| !!! | CATTGTTACAATTGTTGTTT+TGG | - | chr5_4:50439445-50439464 | Msa0856090:CDS | 25.0% |
| ! | ATATCTCATCAATAACTTCA+TGG | + | chr5_4:50439718-50439737 | None:intergenic | 25.0% |
| !! | TATTTTCTTGATATGCAAGA+TGG | + | chr5_4:50440036-50440055 | None:intergenic | 25.0% |
| ! | ATTTAAATTATGGGTCTGTT+TGG | - | chr5_4:50440105-50440124 | Msa0856090:intron | 25.0% |
| ! | TTATAAGCTACTCTGTATAT+TGG | + | chr5_4:50440248-50440267 | None:intergenic | 25.0% |
| ! | TGAAATGTTATAACAGAGTT+TGG | - | chr5_4:50440415-50440434 | Msa0856090:intron | 25.0% |
| !!! | TTTTTCAAAAATCGACAACT+TGG | + | chr5_4:50440624-50440643 | None:intergenic | 25.0% |
| !! | AATACTATGTTTTATACCAC+AGG | - | chr5_4:50440998-50441017 | Msa0856090:intron | 25.0% |
| ! | ATGAAAACTAGAAGTAAAAG+AGG | + | chr5_4:50441086-50441105 | None:intergenic | 25.0% |
| ! | CACAAGATAAAATGGATATA+AGG | + | chr5_4:50441220-50441239 | None:intergenic | 25.0% |
| !!! | GATTTTGAAATTTATCGCTT+TGG | - | chr5_4:50441363-50441382 | Msa0856090:CDS | 25.0% |
| ! | TAATAAATGACATTGGATGA+CGG | + | chr5_4:50441393-50441412 | None:intergenic | 25.0% |
| ! | CTTTCTTATGATATCAACTA+TGG | + | chr5_4:50441555-50441574 | None:intergenic | 25.0% |
| !! | TTGAAAATGGTCTTACATTA+AGG | - | chr5_4:50441653-50441672 | Msa0856090:intron | 25.0% |
| !! | TGAAAATGGTCTTACATTAA+GGG | - | chr5_4:50441654-50441673 | Msa0856090:intron | 25.0% |
| ! | GATAAAGAAATATGAGAAGT+AGG | - | chr5_4:50441676-50441695 | Msa0856090:intron | 25.0% |
| !! | AGAAGTAGGTCTTATAATTA+GGG | - | chr5_4:50441690-50441709 | Msa0856090:intron | 25.0% |
| !! | AGCCAAATTTATCAAGATTT+TGG | - | chr5_4:50441974-50441993 | Msa0856090:intron | 25.0% |
| ! | ATAACTATCTTTCATGGAAA+AGG | + | chr5_4:50442029-50442048 | None:intergenic | 25.0% |
| !! | GTCGAATGAATATCTATTTT+AGG | - | chr5_4:50442068-50442087 | Msa0856090:intron | 25.0% |
| ! | CAAATGCATTTAGATGATAA+CGG | - | chr5_4:50442340-50442359 | Msa0856090:intron | 25.0% |
| !! | AGTCAAATAATTATTTTCCC+TGG | + | chr5_4:50442422-50442441 | None:intergenic | 25.0% |
| !! | TTTCACACTTTCAAGATTTT+TGG | - | chr5_4:50442572-50442591 | Msa0856090:intron | 25.0% |
| ! | AGTATACTTATAAGAATTGC+TGG | + | chr5_4:50442618-50442637 | None:intergenic | 25.0% |
| !! | TAAATACTCAGTTTTCTTCT+GGG | + | chr5_4:50442730-50442749 | None:intergenic | 25.0% |
| !! | TTAAATACTCAGTTTTCTTC+TGG | + | chr5_4:50442731-50442750 | None:intergenic | 25.0% |
| !!! | AATAAGACTTATTTTAGTCC+TGG | - | chr5_4:50442768-50442787 | Msa0856090:intron | 25.0% |
| !!! | TTATTTTAGTCCTGGTTAAA+GGG | - | chr5_4:50442776-50442795 | Msa0856090:intron | 25.0% |
| !! | GTGATCAAATTGTTAGATTT+TGG | - | chr5_4:50442826-50442845 | Msa0856090:intron | 25.0% |
| !! | TAATAGAAACACTATCCTTT+TGG | + | chr5_4:50442887-50442906 | None:intergenic | 25.0% |
| ! | AAGTAGAATACTATTCTTCA+AGG | - | chr5_4:50442923-50442942 | Msa0856090:intron | 25.0% |
| ! | AGTAGAATACTATTCTTCAA+GGG | - | chr5_4:50442924-50442943 | Msa0856090:intron | 25.0% |
| ! | AAATTTGATAAAATTGAGGG+AGG | - | chr5_4:50442953-50442972 | Msa0856090:intron | 25.0% |
| ! | ATGCAAAATTAATGACACAT+AGG | + | chr5_4:50443096-50443115 | None:intergenic | 25.0% |
| ! | AAGGAAATTAAGCTTCATAA+AGG | + | chr5_4:50443154-50443173 | None:intergenic | 25.0% |
| ! | AAAGTTTGAATCATAAGTGA+GGG | + | chr5_4:50443330-50443349 | None:intergenic | 25.0% |
| ! | AAAAGTTTGAATCATAAGTG+AGG | + | chr5_4:50443331-50443350 | None:intergenic | 25.0% |
| ! | ATTCTTGGTTTATAAAAGGA+AGG | - | chr5_4:50443354-50443373 | Msa0856090:intron | 25.0% |
| !!! | TTATCCCATTGATATTTTGA+TGG | - | chr5_4:50443505-50443524 | Msa0856090:intron | 25.0% |
| ! | ATGACCATCAAAATATCAAT+GGG | + | chr5_4:50443512-50443531 | None:intergenic | 25.0% |
| ! | AATACTCGCGAAAAAAATAA+AGG | + | chr5_4:50443648-50443667 | None:intergenic | 25.0% |
| ! | CTTATACAAGTTAAATTACC+AGG | + | chr5_4:50443833-50443852 | None:intergenic | 25.0% |
| ! | AGAGAAGTTATGATTATGAT+AGG | - | chr5_4:50444388-50444407 | Msa0856090:intron | 25.0% |
| ! | GCTAAACTTAAAGATTTGTA+CGG | - | chr5_4:50444612-50444631 | Msa0856090:intron | 25.0% |
| ! | TTCTAATGTTGAATACCTTT+AGG | - | chr5_4:50445030-50445049 | Msa0856090:intron | 25.0% |
| !! | TTTAAAGCTAAAACTCCTAA+AGG | + | chr5_4:50445048-50445067 | None:intergenic | 25.0% |
| TAGAAGAAAAGAAAAACGCA+AGG | + | chr5_4:50438538-50438557 | None:intergenic | 30.0% | |
| TTGTATAAGTCAATCCAAAC+AGG | + | chr5_4:50439016-50439035 | None:intergenic | 30.0% | |
| CAGTCAAACAAAACTTATGT+CGG | + | chr5_4:50439048-50439067 | None:intergenic | 30.0% | |
| ! | ACATTTTTCATAAGTTCTCC+AGG | - | chr5_4:50439097-50439116 | Msa0856090:CDS | 30.0% |
| TACATATGGGACTTTACTTA+CGG | - | chr5_4:50439316-50439335 | Msa0856090:CDS | 30.0% | |
| GATAAGCACTTCACTTTAAA+TGG | - | chr5_4:50439345-50439364 | Msa0856090:CDS | 30.0% | |
| TGTGATTGAAATGAAACAGT+AGG | - | chr5_4:50439375-50439394 | Msa0856090:CDS | 30.0% | |
| !!! | TTTTGTCAAATGTTGACTCT+CGG | + | chr5_4:50439537-50439556 | None:intergenic | 30.0% |
| TGACAAAATTGTGTAACTGT+TGG | - | chr5_4:50439549-50439568 | Msa0856090:CDS | 30.0% | |
| ! | TACATTTTCTGACTCAATCA+TGG | - | chr5_4:50439586-50439605 | Msa0856090:CDS | 30.0% |
| ATGACAGAATATTCATGCAA+AGG | + | chr5_4:50439658-50439677 | None:intergenic | 30.0% | |
| !! | ATACAATCAAGTTGATCATG+TGG | - | chr5_4:50439736-50439755 | Msa0856090:intron | 30.0% |
| TTCCTAAACTCGATACAAAA+TGG | + | chr5_4:50439982-50440001 | None:intergenic | 30.0% | |
| TGCAAGATGGCTAATTATAA+AGG | + | chr5_4:50440023-50440042 | None:intergenic | 30.0% | |
| ATTATCAATCAAACTGTCTC+AGG | + | chr5_4:50440067-50440086 | None:intergenic | 30.0% | |
| ! | CTTATTTGAGCTTTATCTAC+TGG | - | chr5_4:50440133-50440152 | Msa0856090:intron | 30.0% |
| !! | ATAAGTTTTGTGAGACTGTT+TGG | - | chr5_4:50440157-50440176 | Msa0856090:intron | 30.0% |
| !! | TAAGTTTTGTGAGACTGTTT+GGG | - | chr5_4:50440158-50440177 | Msa0856090:intron | 30.0% |
| GCTTATGTATAAGTTTGCAT+AGG | + | chr5_4:50440327-50440346 | None:intergenic | 30.0% | |
| TTATACATAAGCGCTTATCA+TGG | - | chr5_4:50440335-50440354 | Msa0856090:intron | 30.0% | |
| AATAAGCTGTTTATCCAAAC+AGG | - | chr5_4:50440382-50440401 | Msa0856090:intron | 30.0% | |
| ATAGTAGTAAGCAAAAACCA+TGG | + | chr5_4:50440521-50440540 | None:intergenic | 30.0% | |
| TCACATCTATAAGCATGAAT+TGG | - | chr5_4:50440549-50440568 | Msa0856090:intron | 30.0% | |
| CTTAGGTCTTAAGATTTCAA+GGG | + | chr5_4:50440660-50440679 | None:intergenic | 30.0% | |
| GGTCAAATGATTGACAAAAT+AGG | + | chr5_4:50440691-50440710 | None:intergenic | 30.0% | |
| ATTCAATCTGCATTTGTTTC+AGG | - | chr5_4:50440852-50440871 | Msa0856090:intron | 30.0% | |
| CTCTATTTGTGTACTATGTT+TGG | - | chr5_4:50440919-50440938 | Msa0856090:intron | 30.0% | |
| AAAACTAGAAGTAAAAGAGG+AGG | + | chr5_4:50441083-50441102 | None:intergenic | 30.0% | |
| !!! | CTTCTAGTTTTCATGAAGTT+AGG | - | chr5_4:50441092-50441111 | Msa0856090:intron | 30.0% |
| ! | TGATTCCTTATGTTGGTTAT+AGG | - | chr5_4:50441248-50441267 | Msa0856090:intron | 30.0% |
| !! | GTAAATGGGTCTTATTGTAA+GGG | + | chr5_4:50441469-50441488 | None:intergenic | 30.0% |
| !! | TGTAAATGGGTCTTATTGTA+AGG | + | chr5_4:50441470-50441489 | None:intergenic | 30.0% |
| AGACCCATTTACAAAATTCA+CGG | - | chr5_4:50441477-50441496 | Msa0856090:intron | 30.0% | |
| ! | TACCCGTGAATTTTGTAAAT+GGG | + | chr5_4:50441483-50441502 | None:intergenic | 30.0% |
| ! | ATACCCGTGAATTTTGTAAA+TGG | + | chr5_4:50441484-50441503 | None:intergenic | 30.0% |
| TGCAAGTGAAAGTTTGAAAA+TGG | - | chr5_4:50441640-50441659 | Msa0856090:intron | 30.0% | |
| ! | GAGAAGTAGGTCTTATAATT+AGG | - | chr5_4:50441689-50441708 | Msa0856090:intron | 30.0% |
| ! | TAAGAAAAAGTACGACATCA+AGG | + | chr5_4:50441859-50441878 | None:intergenic | 30.0% |
| ! | TTTTGTACCTTTGCTTGATA+TGG | - | chr5_4:50441907-50441926 | Msa0856090:intron | 30.0% |
| ! | TTGGTATTTATGTTTTGCTG+TGG | - | chr5_4:50441993-50442012 | Msa0856090:intron | 30.0% |
| GCATTTAAAAGTTCTCTCTT+AGG | - | chr5_4:50442095-50442114 | Msa0856090:intron | 30.0% | |
| !! | AACTGATGATGCTTTATTTC+AGG | - | chr5_4:50442169-50442188 | Msa0856090:intron | 30.0% |
| ! | TTATTTCAGGAATTTTCTCC+TGG | - | chr5_4:50442182-50442201 | Msa0856090:intron | 30.0% |
| !! | TTTTATGAAAGTGTGCTTTC+TGG | - | chr5_4:50442273-50442292 | Msa0856090:CDS | 30.0% |
| ! | TTCCTCATCATCACATATTT+TGG | - | chr5_4:50442531-50442550 | Msa0856090:intron | 30.0% |
| !!! | TATTTTGGAGTAACAGTATG+AGG | - | chr5_4:50442546-50442565 | Msa0856090:intron | 30.0% |
| AAAATGATACCGTGGTAAAA+AGG | + | chr5_4:50442673-50442692 | None:intergenic | 30.0% | |
| AAAACAAGAAAATGATACCG+TGG | + | chr5_4:50442681-50442700 | None:intergenic | 30.0% | |
| !! | TTTCTAAAATCACTACACCT+AGG | - | chr5_4:50442702-50442721 | Msa0856090:intron | 30.0% |
| !!! | CTTATTTTAGTCCTGGTTAA+AGG | - | chr5_4:50442775-50442794 | Msa0856090:intron | 30.0% |
| GTTAAAGGGACACTAATATT+GGG | - | chr5_4:50442790-50442809 | Msa0856090:intron | 30.0% | |
| CGAATAGAGGTTAAATTTGA+CGG | - | chr5_4:50442856-50442875 | Msa0856090:intron | 30.0% | |
| TAAGCTTCATAAAGGATTAG+AGG | + | chr5_4:50443146-50443165 | None:intergenic | 30.0% | |
| !! | TTTCTTTCTCTAAGATCTCA+AGG | + | chr5_4:50443173-50443192 | None:intergenic | 30.0% |
| TGAGATCTTAGAGAAAGAAA+TGG | - | chr5_4:50443173-50443192 | Msa0856090:intron | 30.0% | |
| GAGATCTTAGAGAAAGAAAT+GGG | - | chr5_4:50443174-50443193 | Msa0856090:intron | 30.0% | |
| TGCAAAAACCTGATATACAA+AGG | + | chr5_4:50443233-50443252 | None:intergenic | 30.0% | |
| ! | ATTTCCCTTAACATTTTTCC+TGG | - | chr5_4:50443283-50443302 | Msa0856090:intron | 30.0% |
| ! | TTTCCCTTAACATTTTTCCT+GGG | - | chr5_4:50443284-50443303 | Msa0856090:intron | 30.0% |
| ATACCCAGGAAAAATGTTAA+GGG | + | chr5_4:50443290-50443309 | None:intergenic | 30.0% | |
| TATACCCAGGAAAAATGTTA+AGG | + | chr5_4:50443291-50443310 | None:intergenic | 30.0% | |
| ! | TTAACATTTTTCCTGGGTAT+AGG | - | chr5_4:50443290-50443309 | Msa0856090:intron | 30.0% |
| ! | TAACATTTTTCCTGGGTATA+GGG | - | chr5_4:50443291-50443310 | Msa0856090:intron | 30.0% |
| AAGTTTGAATCATAAGTGAG+GGG | + | chr5_4:50443329-50443348 | None:intergenic | 30.0% | |
| CATGACCATCAAAATATCAA+TGG | + | chr5_4:50443513-50443532 | None:intergenic | 30.0% | |
| TCATGTATGAATTGAATTCG+TGG | - | chr5_4:50443528-50443547 | Msa0856090:intron | 30.0% | |
| !!! | CACTTTTTTACCCTAAGAAA+CGG | + | chr5_4:50443692-50443711 | None:intergenic | 30.0% |
| AAGTGTGTAATTATCTCTTC+TGG | - | chr5_4:50443707-50443726 | Msa0856090:CDS | 30.0% | |
| GAATGAAGGGTAAAAATATG+GGG | + | chr5_4:50443811-50443830 | None:intergenic | 30.0% | |
| GGAATGAAGGGTAAAAATAT+GGG | + | chr5_4:50443812-50443831 | None:intergenic | 30.0% | |
| AGGAATGAAGGGTAAAAATA+TGG | + | chr5_4:50443813-50443832 | None:intergenic | 30.0% | |
| !! | ATATTTTTACCCTTCATTCC+TGG | - | chr5_4:50443812-50443831 | Msa0856090:CDS | 30.0% |
| GTTAAATTACCAGGAATGAA+GGG | + | chr5_4:50443824-50443843 | None:intergenic | 30.0% | |
| AGTTAAATTACCAGGAATGA+AGG | + | chr5_4:50443825-50443844 | None:intergenic | 30.0% | |
| CATAATCATAACTTCTCTCT+CGG | + | chr5_4:50444386-50444405 | None:intergenic | 30.0% | |
| GAAGTTATGATTATGATAGG+AGG | - | chr5_4:50444391-50444410 | Msa0856090:intron | 30.0% | |
| AAAGATTTGTACGGTGATTT+AGG | - | chr5_4:50444621-50444640 | Msa0856090:intron | 30.0% | |
| ! | TTTTCAATGGAACAGTTATC+CGG | + | chr5_4:50444773-50444792 | None:intergenic | 30.0% |
| ! | TCCATTGAAAAAGAGCATAT+TGG | - | chr5_4:50444782-50444801 | Msa0856090:intron | 30.0% |
| !!! | TCCAATATGCTCTTTTTCAA+TGG | + | chr5_4:50444786-50444805 | None:intergenic | 30.0% |
| GATAATGAAAGGCAATGAAA+AGG | + | chr5_4:50444814-50444833 | None:intergenic | 30.0% | |
| ACTTGGTTGACATAAGTTAT+AGG | - | chr5_4:50444834-50444853 | Msa0856090:intron | 30.0% | |
| ACATAGTTTCAACTGAACAA+TGG | + | chr5_4:50444990-50445009 | None:intergenic | 30.0% | |
| GTACTTTCTCTCTTCAGATA+CGG | - | chr5_4:50438396-50438415 | Msa0856090:three_prime_UTR | 35.0% | |
| TACTTTCTCTCTTCAGATAC+GGG | - | chr5_4:50438397-50438416 | Msa0856090:three_prime_UTR | 35.0% | |
| GTTTGGGTAATCGAAAAGAA+TGG | + | chr5_4:50438425-50438444 | None:intergenic | 35.0% | |
| !!! | AGTTTTTGATTCTGAGGCTT+AGG | + | chr5_4:50438447-50438466 | None:intergenic | 35.0% |
| TCAGAATCAAAAACTCGCTA+GGG | - | chr5_4:50438452-50438471 | Msa0856090:three_prime_UTR | 35.0% | |
| AACCAATCTCTTCGTGTAAT+TGG | - | chr5_4:50438491-50438510 | Msa0856090:three_prime_UTR | 35.0% | |
| TACCAATTACACGAAGAGAT+TGG | + | chr5_4:50438496-50438515 | None:intergenic | 35.0% | |
| GAAAAACGCAAGGAAGAAAT+TGG | + | chr5_4:50438528-50438547 | None:intergenic | 35.0% | |
| TTGGGGGATAATTGAGATTT+GGG | + | chr5_4:50438564-50438583 | None:intergenic | 35.0% | |
| ATTGGGGGATAATTGAGATT+TGG | + | chr5_4:50438565-50438584 | None:intergenic | 35.0% | |
| !! | CTGCTACAAGTTCTGAAATT+TGG | - | chr5_4:50438776-50438795 | Msa0856090:three_prime_UTR | 35.0% |
| AAAACTTATGTCGGTGGATA+AGG | + | chr5_4:50439039-50439058 | None:intergenic | 35.0% | |
| TCAAACAAAACTTATGTCGG+TGG | + | chr5_4:50439045-50439064 | None:intergenic | 35.0% | |
| ! | AGCCTTAGTGTTGGAAATTT+CGG | - | chr5_4:50439238-50439257 | Msa0856090:CDS | 35.0% |
| ATCCGAAATTTCCAACACTA+AGG | + | chr5_4:50439243-50439262 | None:intergenic | 35.0% | |
| ! | AGTGTTGGAAATTTCGGATT+CGG | - | chr5_4:50439244-50439263 | Msa0856090:CDS | 35.0% |
| TCATATGGTAAATGCTTGCA+GGG | + | chr5_4:50439294-50439313 | None:intergenic | 35.0% | |
| AGTCCCATATGTAACTCATA+TGG | + | chr5_4:50439309-50439328 | None:intergenic | 35.0% | |
| ACATATGGGACTTTACTTAC+GGG | - | chr5_4:50439317-50439336 | Msa0856090:CDS | 35.0% | |
| CTCTTATGTAAGGAGAATCA+GGG | + | chr5_4:50439871-50439890 | None:intergenic | 35.0% | |
| TGATTCTCCTTACATAAGAG+CGG | - | chr5_4:50439871-50439890 | Msa0856090:intron | 35.0% | |
| ! | CACCATTTTGTATCGAGTTT+AGG | - | chr5_4:50439977-50439996 | Msa0856090:intron | 35.0% |
| TTCAAGAAATAGAGCCTGTT+TGG | + | chr5_4:50440399-50440418 | None:intergenic | 35.0% | |
| TTGTTGAATCATCAAAGCCA+AGG | - | chr5_4:50440457-50440476 | Msa0856090:intron | 35.0% | |
| CATGAATTGGCGAGATTATA+GGG | - | chr5_4:50440562-50440581 | Msa0856090:intron | 35.0% | |
| ATGAATTGGCGAGATTATAG+GGG | - | chr5_4:50440563-50440582 | Msa0856090:intron | 35.0% | |
| CTCATGAAATTGGACCAAAA+TGG | + | chr5_4:50440600-50440619 | None:intergenic | 35.0% | |
| !! | CATTTTGGTCCAATTTCATG+AGG | - | chr5_4:50440598-50440617 | Msa0856090:intron | 35.0% |
| CCTTAGGTCTTAAGATTTCA+AGG | + | chr5_4:50440661-50440680 | None:intergenic | 35.0% | |
| CCTTGAAATCTTAAGACCTA+AGG | - | chr5_4:50440658-50440677 | Msa0856090:intron | 35.0% | |
| AATCTTAAGACCTAAGGTTC+TGG | - | chr5_4:50440664-50440683 | Msa0856090:intron | 35.0% | |
| !! | GGTTGATATTTTAGAGAGCT+TGG | - | chr5_4:50440796-50440815 | Msa0856090:intron | 35.0% |
| ATGCAGATTGAATAAGAAGC+AGG | + | chr5_4:50440845-50440864 | None:intergenic | 35.0% | |
| !! | CATTTGTTTCAGGTTGTTTG+TGG | - | chr5_4:50440862-50440881 | Msa0856090:intron | 35.0% |
| ! | CTATGTTTTATACCACAGGT+TGG | - | chr5_4:50441002-50441021 | Msa0856090:intron | 35.0% |
| AAGTCAAATTTACCAACCTG+TGG | + | chr5_4:50441017-50441036 | None:intergenic | 35.0% | |
| AGTGTTGTGAATTTAGGCTT+TGG | - | chr5_4:50441044-50441063 | Msa0856090:CDS | 35.0% | |
| TTCATGAAGTTAGGAATGCT+TGG | - | chr5_4:50441101-50441120 | Msa0856090:intron | 35.0% | |
| ATGCAGCTCACAAGATAAAA+TGG | + | chr5_4:50441228-50441247 | None:intergenic | 35.0% | |
| ! | TCCTTATGTTGGTTATAGGT+TGG | - | chr5_4:50441252-50441271 | Msa0856090:intron | 35.0% |
| TCCAACCTATAACCAACATA+AGG | + | chr5_4:50441256-50441275 | None:intergenic | 35.0% | |
| ! | GTCTTATTGTAAGGGATGAA+GGG | + | chr5_4:50441461-50441480 | None:intergenic | 35.0% |
| GACCCATTTACAAAATTCAC+GGG | - | chr5_4:50441478-50441497 | Msa0856090:intron | 35.0% | |
| ! | GTAGGTCTTATAATTAGGGA+TGG | - | chr5_4:50441694-50441713 | Msa0856090:intron | 35.0% |
| GTCTTATAATTAGGGATGGA+TGG | - | chr5_4:50441698-50441717 | Msa0856090:intron | 35.0% | |
| !! | ATGTTTTGCTGTGGCTTTTA+TGG | - | chr5_4:50442002-50442021 | Msa0856090:intron | 35.0% |
| ! | GAATTTTCTCCTGGATCTAA+TGG | - | chr5_4:50442191-50442210 | Msa0856090:intron | 35.0% |
| AATCTAAATATCAAGGGGTC+GGG | + | chr5_4:50442376-50442395 | None:intergenic | 35.0% | |
| ACATAATGACTTATAAGGCC+AGG | - | chr5_4:50442401-50442420 | Msa0856090:intron | 35.0% | |
| CATAATGACTTATAAGGCCA+GGG | - | chr5_4:50442402-50442421 | Msa0856090:intron | 35.0% | |
| ! | CTCCAAAATATGTGATGATG+AGG | + | chr5_4:50442536-50442555 | None:intergenic | 35.0% |
| ATATTAGTGTCCCTTTAACC+AGG | + | chr5_4:50442789-50442808 | None:intergenic | 35.0% | |
| GGTTAAAGGGACACTAATAT+TGG | - | chr5_4:50442789-50442808 | Msa0856090:intron | 35.0% | |
| AATTTGACGGAAACACCAAA+AGG | - | chr5_4:50442869-50442888 | Msa0856090:intron | 35.0% | |
| ! | TTTAGTTGGCGGATCAAAAT+AGG | - | chr5_4:50442986-50443005 | Msa0856090:intron | 35.0% |
| GAATGGATGATACACAAGAT+GGG | + | chr5_4:50443017-50443036 | None:intergenic | 35.0% | |
| TTTATCTCCTCTTCTTTCTG+AGG | - | chr5_4:50443054-50443073 | Msa0856090:intron | 35.0% | |
| ! | TTGTTTCCCCTGCAAATTTT+AGG | - | chr5_4:50443118-50443137 | Msa0856090:intron | 35.0% |
| ! | TGTTTCCCCTGCAAATTTTA+GGG | - | chr5_4:50443119-50443138 | Msa0856090:intron | 35.0% |
| GTAAAACGCCTTTGTATATC+AGG | - | chr5_4:50443222-50443241 | Msa0856090:intron | 35.0% | |
| ! | AACATTTTTCCTGGGTATAG+GGG | - | chr5_4:50443292-50443311 | Msa0856090:intron | 35.0% |
| TCATATGCAAGAAGAGATTC+TGG | - | chr5_4:50443412-50443431 | Msa0856090:intron | 35.0% | |
| ! | ACTTGTGCTGACAACATAAA+AGG | + | chr5_4:50443604-50443623 | None:intergenic | 35.0% |
| TGTGTAATTATCTCTTCTGG+CGG | - | chr5_4:50443710-50443729 | Msa0856090:CDS | 35.0% | |
| !!! | TCAGTGCCATTTTTTTCATG+AGG | + | chr5_4:50444135-50444154 | None:intergenic | 35.0% |
| TATCCCTTTCAGGATATTCA+CGG | + | chr5_4:50444194-50444213 | None:intergenic | 35.0% | |
| TGAATATCCTGAAAGGGATA+GGG | - | chr5_4:50444194-50444213 | Msa0856090:intron | 35.0% | |
| ACAGATATTATGACCGAGAT+AGG | - | chr5_4:50444277-50444296 | Msa0856090:intron | 35.0% | |
| TCTAGGAATTCTTTCCATGT+TGG | + | chr5_4:50444664-50444683 | None:intergenic | 35.0% | |
| ACATGGAAAGAATTCCTAGA+AGG | - | chr5_4:50444664-50444683 | Msa0856090:intron | 35.0% | |
| CATGGAAAGAATTCCTAGAA+GGG | - | chr5_4:50444665-50444684 | Msa0856090:intron | 35.0% | |
| ATTCCTAGAAGGGATAATAG+TGG | - | chr5_4:50444675-50444694 | Msa0856090:intron | 35.0% | |
| CATTGCCTTTCATTATCACT+TGG | - | chr5_4:50444817-50444836 | Msa0856090:intron | 35.0% | |
| ! | GTCAACCAAGTGATAATGAA+AGG | + | chr5_4:50444825-50444844 | None:intergenic | 35.0% |
| ! | AGTCTAAAACTTGCAAAGCA+GGG | + | chr5_4:50444930-50444949 | None:intergenic | 35.0% |
| ! | AAGTCTAAAACTTGCAAAGC+AGG | + | chr5_4:50444931-50444950 | None:intergenic | 35.0% |
| ! | ACGACATCAGATTATTGACT+TGG | + | chr5_4:50445071-50445090 | None:intergenic | 35.0% |
| !! | TGATTCTGAGGCTTAGGTTT+GGG | + | chr5_4:50438441-50438460 | None:intergenic | 40.0% |
| !! | TTGATTCTGAGGCTTAGGTT+TGG | + | chr5_4:50438442-50438461 | None:intergenic | 40.0% |
| !! | CTAGCGAGTTTTTGATTCTG+AGG | + | chr5_4:50438453-50438472 | None:intergenic | 40.0% |
| CTCAGAATCAAAAACTCGCT+AGG | - | chr5_4:50438451-50438470 | Msa0856090:three_prime_UTR | 40.0% | |
| TAGTAGAAAGAAGGGGACAA+GGG | + | chr5_4:50438664-50438683 | None:intergenic | 40.0% | |
| ATAGTAGAAAGAAGGGGACA+AGG | + | chr5_4:50438665-50438684 | None:intergenic | 40.0% | |
| ! | TGTGTGTGAATTTTGCAGCT+AGG | + | chr5_4:50438979-50438998 | None:intergenic | 40.0% |
| ! | CTTTTGCATAAGTGCCTGTT+TGG | - | chr5_4:50438999-50439018 | Msa0856090:CDS | 40.0% |
| !! | GCTGTTTTCATAAGCTATCC+TGG | + | chr5_4:50439118-50439137 | None:intergenic | 40.0% |
| ACATTTGATATGTTCGGGCA+CGG | + | chr5_4:50439271-50439290 | None:intergenic | 40.0% | |
| CAGGGACATTTGATATGTTC+GGG | + | chr5_4:50439276-50439295 | None:intergenic | 40.0% | |
| GCAGGGACATTTGATATGTT+CGG | + | chr5_4:50439277-50439296 | None:intergenic | 40.0% | |
| CTCATATGGTAAATGCTTGC+AGG | + | chr5_4:50439295-50439314 | None:intergenic | 40.0% | |
| ATCATGGAGATACAGACTTC+TGG | - | chr5_4:50439602-50439621 | Msa0856090:CDS | 40.0% | |
| TTCTCTAGCAAGGACTCAAT+TGG | + | chr5_4:50439632-50439651 | None:intergenic | 40.0% | |
| ! | AAGTTGATCATGTGGAACCA+TGG | - | chr5_4:50439744-50439763 | Msa0856090:intron | 40.0% |
| AGAAGACAGAAAGCAGTTGA+AGG | + | chr5_4:50439791-50439810 | None:intergenic | 40.0% | |
| GCTCTTATGTAAGGAGAATC+AGG | + | chr5_4:50439872-50439891 | None:intergenic | 40.0% | |
| CTACATACCGCTCTTATGTA+AGG | + | chr5_4:50439881-50439900 | None:intergenic | 40.0% | |
| TACATAAGAGCGGTATGTAG+AGG | - | chr5_4:50439881-50439900 | Msa0856090:intron | 40.0% | |
| TAGACGAAATCAGGGATAGA+TGG | - | chr5_4:50440480-50440499 | Msa0856090:intron | 40.0% | |
| GCATGAATTGGCGAGATTAT+AGG | - | chr5_4:50440561-50440580 | Msa0856090:intron | 40.0% | |
| ACAACTTGGCCTCATGAAAT+TGG | + | chr5_4:50440610-50440629 | None:intergenic | 40.0% | |
| CAAAATAGGTCCAGAACCTT+AGG | + | chr5_4:50440677-50440696 | None:intergenic | 40.0% | |
| CTGATATCAGATGTGGTTTG+TGG | - | chr5_4:50440775-50440794 | Msa0856090:intron | 40.0% | |
| !! | ATTTTAGAGAGCTTGGCTGT+TGG | - | chr5_4:50440803-50440822 | Msa0856090:intron | 40.0% |
| TTGAATAAGAAGCAGGACGT+GGG | + | chr5_4:50440838-50440857 | None:intergenic | 40.0% | |
| ATTGAATAAGAAGCAGGACG+TGG | + | chr5_4:50440839-50440858 | None:intergenic | 40.0% | |
| ! | GTTGCGAGTGTTGTGAATTT+AGG | - | chr5_4:50441038-50441057 | Msa0856090:CDS | 40.0% |
| !! | GCTGCATTGATTCCTTATGT+TGG | - | chr5_4:50441241-50441260 | Msa0856090:intron | 40.0% |
| ACCTCATCATCCTTTGCATA+TGG | + | chr5_4:50441333-50441352 | None:intergenic | 40.0% | |
| !! | GGTCTTATTGTAAGGGATGA+AGG | + | chr5_4:50441462-50441481 | None:intergenic | 40.0% |
| ! | TCTATGAGGGGTTTTCGTTA+TGG | - | chr5_4:50441825-50441844 | Msa0856090:intron | 40.0% |
| CATAGCTCCATATCAAGCAA+AGG | + | chr5_4:50441917-50441936 | None:intergenic | 40.0% | |
| TTTCTCCTGGATCTAATGGA+CGG | - | chr5_4:50442195-50442214 | Msa0856090:intron | 40.0% | |
| !! | TATATCCGTGATTTGCTCCT+TGG | - | chr5_4:50442236-50442255 | Msa0856090:CDS | 40.0% |
| AAAGATAACGAACCTGTCCA+AGG | + | chr5_4:50442256-50442275 | None:intergenic | 40.0% | |
| ATCTAAATATCAAGGGGTCG+GGG | + | chr5_4:50442375-50442394 | None:intergenic | 40.0% | |
| CAATTTGATCACTCAAGTGC+AGG | + | chr5_4:50442818-50442837 | None:intergenic | 40.0% | |
| !!! | GAGGCAGTGCATATTTTAGT+TGG | - | chr5_4:50442972-50442991 | Msa0856090:intron | 40.0% |
| !!! | GCAGTGCATATTTTAGTTGG+CGG | - | chr5_4:50442975-50442994 | Msa0856090:intron | 40.0% |
| GGAATGGATGATACACAAGA+TGG | + | chr5_4:50443018-50443037 | None:intergenic | 40.0% | |
| AGAGGACCCTAAAATTTGCA+GGG | + | chr5_4:50443128-50443147 | None:intergenic | 40.0% | |
| TAGAGGACCCTAAAATTTGC+AGG | + | chr5_4:50443129-50443148 | None:intergenic | 40.0% | |
| AGGGTAAAAATATGGGGCAA+CGG | + | chr5_4:50443805-50443824 | None:intergenic | 40.0% | |
| AAACTCCCTACTACACATTG+TGG | - | chr5_4:50443958-50443977 | Msa0856090:CDS | 40.0% | |
| TCGTACCACAATGTGTAGTA+GGG | + | chr5_4:50443966-50443985 | None:intergenic | 40.0% | |
| CTGACCAAAAGAGACTGAAA+GGG | + | chr5_4:50444052-50444071 | None:intergenic | 40.0% | |
| !!! | CCATTTTTTTCATGAGGAGC+AGG | + | chr5_4:50444129-50444148 | None:intergenic | 40.0% |
| CCTGCTCCTCATGAAAAAAA+TGG | - | chr5_4:50444126-50444145 | Msa0856090:intron | 40.0% | |
| GTGAATATCCTGAAAGGGAT+AGG | - | chr5_4:50444193-50444212 | Msa0856090:intron | 40.0% | |
| TTATGACCGAGATAGGAACA+AGG | - | chr5_4:50444284-50444303 | Msa0856090:intron | 40.0% | |
| ATGCTGAAAGATACAGGGAT+CGG | - | chr5_4:50444313-50444332 | Msa0856090:intron | 40.0% | |
| CAATGCTGTTGTCATAATCC+CGG | + | chr5_4:50444443-50444462 | None:intergenic | 40.0% | |
| !! | TATGACAACAGCATTGGCAA+TGG | - | chr5_4:50444447-50444466 | Msa0856090:intron | 40.0% |
| TTCTTACTTCCATCTCTCTG+TGG | + | chr5_4:50444570-50444589 | None:intergenic | 40.0% | |
| GGTGATTTAGGTGAAAGCAA+AGG | - | chr5_4:50444633-50444652 | Msa0856090:intron | 40.0% | |
| TCACCACTATTATCCCTTCT+AGG | + | chr5_4:50444681-50444700 | None:intergenic | 40.0% | |
| AAGGGATAATAGTGGTGAAG+AGG | - | chr5_4:50444683-50444702 | Msa0856090:intron | 40.0% | |
| GGTGAAGAGGTTATTAGACT+TGG | - | chr5_4:50444696-50444715 | Msa0856090:intron | 40.0% | |
| GAAGAGGTTATTAGACTTGG+TGG | - | chr5_4:50444699-50444718 | Msa0856090:intron | 40.0% | |
| AGAATGCTTGTATCTGATGC+CGG | - | chr5_4:50444751-50444770 | Msa0856090:intron | 40.0% | |
| TCAACTGAACAATGGAAGCA+TGG | + | chr5_4:50444982-50445001 | None:intergenic | 40.0% | |
| GCTGTCTAGATGCAAATTGA+TGG | - | chr5_4:50445119-50445138 | Msa0856090:five_prime_UTR | 40.0% | |
| TCCAAACAGAGCCTTAGTGT+TGG | - | chr5_4:50439229-50439248 | Msa0856090:CDS | 45.0% | |
| TCCAACACTAAGGCTCTGTT+TGG | + | chr5_4:50439233-50439252 | None:intergenic | 45.0% | |
| !! | TGTCAAATGTTGACTCTCGG+CGG | + | chr5_4:50439534-50439553 | None:intergenic | 45.0% |
| TGTGTAACTGTTGGAGTGAG+AGG | - | chr5_4:50439558-50439577 | Msa0856090:CDS | 45.0% | |
| GTGTAACTGTTGGAGTGAGA+GGG | - | chr5_4:50439559-50439578 | Msa0856090:CDS | 45.0% | |
| TGTAACTGTTGGAGTGAGAG+GGG | - | chr5_4:50439560-50439579 | Msa0856090:CDS | 45.0% | |
| GCAAAGGACTTTCTCTAGCA+AGG | + | chr5_4:50439642-50439661 | None:intergenic | 45.0% | |
| TCATGTGGAACCATGGATGA+CGG | - | chr5_4:50439751-50439770 | Msa0856090:intron | 45.0% | |
| TCACTGTCAAGCAGATGCAT+GGG | - | chr5_4:50439834-50439853 | Msa0856090:intron | 45.0% | |
| ! | AGTTTGGCTTAGTGCGTTAG+TGG | - | chr5_4:50440431-50440450 | Msa0856090:intron | 45.0% |
| AAGCCAAGGTAGACGAAATC+AGG | - | chr5_4:50440471-50440490 | Msa0856090:intron | 45.0% | |
| AGCCAAGGTAGACGAAATCA+GGG | - | chr5_4:50440472-50440491 | Msa0856090:intron | 45.0% | |
| ATCCCTGATTTCGTCTACCT+TGG | + | chr5_4:50440477-50440496 | None:intergenic | 45.0% | |
| CGAAATCAGGGATAGATGGT+AGG | - | chr5_4:50440484-50440503 | Msa0856090:intron | 45.0% | |
| GGTAGGATTGAACACTTCCA+TGG | - | chr5_4:50440501-50440520 | Msa0856090:intron | 45.0% | |
| CGAGATTATAGGGGATCACT+TGG | - | chr5_4:50440572-50440591 | Msa0856090:intron | 45.0% | |
| ! | GGGATCACTTGGATCCATTT+TGG | - | chr5_4:50440583-50440602 | Msa0856090:intron | 45.0% |
| ACCACATCTGATATCAGCCA+CGG | + | chr5_4:50440772-50440791 | None:intergenic | 45.0% | |
| GTGGTGCTCAACTGAATTCT+TGG | - | chr5_4:50440881-50440900 | Msa0856090:intron | 45.0% | |
| ATGCTGATCCAAAGACTCTG+TGG | - | chr5_4:50441295-50441314 | Msa0856090:intron | 45.0% | |
| ! | CTGGTTTGAGCCATATGCAA+AGG | - | chr5_4:50441320-50441339 | Msa0856090:intron | 45.0% |
| GCCATATGCAAAGGATGATG+AGG | - | chr5_4:50441329-50441348 | Msa0856090:CDS | 45.0% | |
| ! | TAATGGACGGATGACTACGA+TGG | - | chr5_4:50442208-50442227 | Msa0856090:intron | 45.0% |
| AATGGACGGATGACTACGAT+GGG | - | chr5_4:50442209-50442228 | Msa0856090:intron | 45.0% | |
| TTGCATTCTTGTGATGCACC+TGG | + | chr5_4:50442500-50442519 | None:intergenic | 45.0% | |
| !! | CAGTTTTCTTCTGGGAACCT+AGG | + | chr5_4:50442722-50442741 | None:intergenic | 45.0% |
| !! | TTTTGGGAGACTGCGAATAG+AGG | - | chr5_4:50442843-50442862 | Msa0856090:intron | 45.0% |
| AGCTCAACCTCAGAAAGAAG+AGG | + | chr5_4:50443064-50443083 | None:intergenic | 45.0% | |
| GAGGACCCTAAAATTTGCAG+GGG | + | chr5_4:50443127-50443146 | None:intergenic | 45.0% | |
| ATCAACGCTCACCGTTTCTT+AGG | - | chr5_4:50443678-50443697 | Msa0856090:intron | 45.0% | |
| TCAACGCTCACCGTTTCTTA+GGG | - | chr5_4:50443679-50443698 | Msa0856090:intron | 45.0% | |
| GGTAAAAATATGGGGCAACG+GGG | + | chr5_4:50443803-50443822 | None:intergenic | 45.0% | |
| GGGTAAAAATATGGGGCAAC+GGG | + | chr5_4:50443804-50443823 | None:intergenic | 45.0% | |
| GTCGTACCACAATGTGTAGT+AGG | + | chr5_4:50443967-50443986 | None:intergenic | 45.0% | |
| ACTACACATTGTGGTACGAC+AGG | - | chr5_4:50443967-50443986 | Msa0856090:exon | 45.0% | |
| CTACACATTGTGGTACGACA+GGG | - | chr5_4:50443968-50443987 | Msa0856090:exon | 45.0% | |
| TACACATTGTGGTACGACAG+GGG | - | chr5_4:50443969-50443988 | Msa0856090:exon | 45.0% | |
| TTTCACAGAAGGTGGTCTAC+GGG | + | chr5_4:50444025-50444044 | None:intergenic | 45.0% | |
| CTTTCACAGAAGGTGGTCTA+CGG | + | chr5_4:50444026-50444045 | None:intergenic | 45.0% | |
| GCTGACCAAAAGAGACTGAA+AGG | + | chr5_4:50444053-50444072 | None:intergenic | 45.0% | |
| TTCTTCACCCATTCGTCGTA+CGG | - | chr5_4:50444101-50444120 | Msa0856090:intron | 45.0% | |
| AGAGCCGTGAATATCCTGAA+AGG | - | chr5_4:50444187-50444206 | Msa0856090:intron | 45.0% | |
| GAGCCGTGAATATCCTGAAA+GGG | - | chr5_4:50444188-50444207 | Msa0856090:intron | 45.0% | |
| AAAGGGATAGGGAACGTGAT+AGG | - | chr5_4:50444253-50444272 | Msa0856090:intron | 45.0% | |
| AAGGGATAGGGAACGTGATA+GGG | - | chr5_4:50444254-50444273 | Msa0856090:intron | 45.0% | |
| ACCGAGATGCTGAAAGATAC+AGG | - | chr5_4:50444307-50444326 | Msa0856090:intron | 45.0% | |
| CCCTGTATCTTTCAGCATCT+CGG | + | chr5_4:50444311-50444330 | None:intergenic | 45.0% | |
| CCGAGATGCTGAAAGATACA+GGG | - | chr5_4:50444308-50444327 | Msa0856090:intron | 45.0% | |
| TGCTGAAAGATACAGGGATC+GGG | - | chr5_4:50444314-50444333 | Msa0856090:intron | 45.0% | |
| CGGGATTATGACAACAGCAT+TGG | - | chr5_4:50444441-50444460 | Msa0856090:intron | 45.0% | |
| !! | ACAGCATTGGCAATGGTAGT+AGG | - | chr5_4:50444454-50444473 | Msa0856090:intron | 45.0% |
| AAGCAAAGGAGATGCCAACA+TGG | - | chr5_4:50444647-50444666 | Msa0856090:intron | 45.0% | |
| !! | TTAGACTTGGTGGCTCTTCT+TGG | - | chr5_4:50444709-50444728 | Msa0856090:intron | 45.0% |
| TGGAGATACAGACTTCTGGC+AGG | - | chr5_4:50439606-50439625 | Msa0856090:CDS | 50.0% | |
| CATGTGGAACCATGGATGAC+GGG | - | chr5_4:50439752-50439771 | Msa0856090:intron | 50.0% | |
| ATGTGGAACCATGGATGACG+GGG | - | chr5_4:50439753-50439772 | Msa0856090:intron | 50.0% | |
| CTGCTTGACAGTGAGCTTCA+TGG | + | chr5_4:50439828-50439847 | None:intergenic | 50.0% | |
| CTCACTGTCAAGCAGATGCA+TGG | - | chr5_4:50439833-50439852 | Msa0856090:intron | 50.0% | |
| GGCGTACAGATTACAAGGGA+AGG | + | chr5_4:50440712-50440731 | None:intergenic | 50.0% | |
| CACGGGCGTACAGATTACAA+GGG | + | chr5_4:50440716-50440735 | None:intergenic | 50.0% | |
| GGCGTACAGATTACAAGGGA+AGG | + | chr5_4:50440712-50440731 | None:intergenic | 50.0% | |
| CACGGGCGTACAGATTACAA+GGG | + | chr5_4:50440716-50440735 | None:intergenic | 50.0% | |
| CCACATCTGATATCAGCCAC+GGG | + | chr5_4:50440771-50440790 | None:intergenic | 50.0% | |
| ATAAGAAGCAGGACGTGGGA+AGG | + | chr5_4:50440834-50440853 | None:intergenic | 50.0% | |
| ATCCAAAGACTCTGTGGAGC+TGG | - | chr5_4:50441301-50441320 | Msa0856090:intron | 50.0% | |
| AACCAGCTCCACAGAGTCTT+TGG | + | chr5_4:50441306-50441325 | None:intergenic | 50.0% | |
| GTCATCCGTCCATTAGATCC+AGG | + | chr5_4:50442203-50442222 | None:intergenic | 50.0% | |
| CCTGTCCAAGGAGCAAATCA+CGG | + | chr5_4:50442244-50442263 | None:intergenic | 50.0% | |
| GAGCTCTACTACCAGAATCC+AGG | - | chr5_4:50442479-50442498 | Msa0856090:intron | 50.0% | |
| CTTGTGATGCACCTGGATTC+TGG | + | chr5_4:50442493-50442512 | None:intergenic | 50.0% | |
| ATCCTGTAATGCCCACCTGT+CGG | - | chr5_4:50443198-50443217 | Msa0856090:intron | 50.0% | |
| !!! | CAAAGGCGTTTTACACCGAC+AGG | + | chr5_4:50443216-50443235 | None:intergenic | 50.0% |
| ATTACAGGAACTGGGATGCG+AGG | + | chr5_4:50443907-50443926 | None:intergenic | 50.0% | |
| CCTGACGCATTACAGGAACT+GGG | + | chr5_4:50443915-50443934 | None:intergenic | 50.0% | |
| ACCTGACGCATTACAGGAAC+TGG | + | chr5_4:50443916-50443935 | None:intergenic | 50.0% | |
| ! | TCCTGTAATGCGTCAGGTTG+TGG | - | chr5_4:50443918-50443937 | Msa0856090:CDS | 50.0% |
| AGTGTCATCAGAACCGTGAC+GGG | + | chr5_4:50444001-50444020 | None:intergenic | 50.0% | |
| CAGTGTCATCAGAACCGTGA+CGG | + | chr5_4:50444002-50444021 | None:intergenic | 50.0% | |
| GAAAGGGCAGCTTTCACAGA+AGG | + | chr5_4:50444036-50444055 | None:intergenic | 50.0% | |
| ! | GCTGCCCTTTCAGTCTCTTT+TGG | - | chr5_4:50444045-50444064 | Msa0856090:five_prime_UTR | 50.0% |
| GGGTGAAGAATCCCTTGTAG+AGG | + | chr5_4:50444091-50444110 | None:intergenic | 50.0% | |
| CTCTGACTGCGATGATTGCT+GGG | + | chr5_4:50444171-50444190 | None:intergenic | 50.0% | |
| ATCCTGAAAGGGATAGGGAC+AGG | - | chr5_4:50444199-50444218 | Msa0856090:intron | 50.0% | |
| TCCTGAAAGGGATAGGGACA+GGG | - | chr5_4:50444200-50444219 | Msa0856090:intron | 50.0% | |
| CACGTTCCCTATCCCTTTCT+CGG | + | chr5_4:50444251-50444270 | None:intergenic | 50.0% | |
| CTCGGTCCTTGTTCCTATCT+CGG | + | chr5_4:50444293-50444312 | None:intergenic | 50.0% | |
| AAAGATACAGGGATCGGGAC+CGG | - | chr5_4:50444319-50444338 | Msa0856090:intron | 50.0% | |
| ACTATGAGAGGGACAGATCC+AGG | - | chr5_4:50444349-50444368 | Msa0856090:intron | 50.0% | |
| ACGCAGAGAGAGAAAGTAGC+CGG | - | chr5_4:50444421-50444440 | Msa0856090:intron | 50.0% | |
| TACTCCGACTCCTACTGTGA+TGG | + | chr5_4:50444482-50444501 | None:intergenic | 50.0% | |
| GTAGGAGTCGGAGTAGAAGT+AGG | - | chr5_4:50444487-50444506 | Msa0856090:intron | 50.0% | |
| !! | TGCCAACTTGGCTCTGACTT+CGG | + | chr5_4:50444521-50444540 | None:intergenic | 50.0% |
| CCACGGGCGTACAGATTACA+AGG | + | chr5_4:50440717-50440736 | None:intergenic | 55.0% | |
| CCTTGTAATCTGTACGCCCG+TGG | - | chr5_4:50440714-50440733 | Msa0856090:intron | 55.0% | |
| CCACGGGCGTACAGATTACA+AGG | + | chr5_4:50440717-50440736 | None:intergenic | 55.0% | |
| CCTTGTAATCTGTACGCCCG+TGG | - | chr5_4:50440714-50440733 | Msa0856090:intron | 55.0% | |
| CCCGTGGCTGATATCAGATG+TGG | - | chr5_4:50440768-50440787 | Msa0856090:intron | 55.0% | |
| !! | CCGTGATTTGCTCCTTGGAC+AGG | - | chr5_4:50442241-50442260 | Msa0856090:CDS | 55.0% |
| ! | GGCGTTTTACACCGACAGGT+GGG | + | chr5_4:50443212-50443231 | None:intergenic | 55.0% |
| ! | AGGCGTTTTACACCGACAGG+TGG | + | chr5_4:50443213-50443232 | None:intergenic | 55.0% |
| CCCAGTTCCTGTAATGCGTC+AGG | - | chr5_4:50443912-50443931 | Msa0856090:CDS | 55.0% | |
| GCCACAACCTGACGCATTAC+AGG | + | chr5_4:50443922-50443941 | None:intergenic | 55.0% | |
| ! | GCGTCAGGTTGTGGCAAATC+TGG | - | chr5_4:50443927-50443946 | Msa0856090:CDS | 55.0% |
| AGGGCAGCTTTCACAGAAGG+TGG | + | chr5_4:50444033-50444052 | None:intergenic | 55.0% | |
| GCCACATCGAGCCTCTACAA+GGG | - | chr5_4:50444077-50444096 | Msa0856090:intron | 55.0% | |
| TCCCTTGTAGAGGCTCGATG+TGG | + | chr5_4:50444081-50444100 | None:intergenic | 55.0% | |
| ! | GCAGGTACCGTACGACGAAT+GGG | + | chr5_4:50444111-50444130 | None:intergenic | 55.0% |
| ! | AGCAGGTACCGTACGACGAA+TGG | + | chr5_4:50444112-50444131 | None:intergenic | 55.0% |
| GCTCTGACTGCGATGATTGC+TGG | + | chr5_4:50444172-50444191 | None:intergenic | 55.0% | |
| TCCCTGTCCCTATCCCTTTC+AGG | + | chr5_4:50444204-50444223 | None:intergenic | 55.0% | |
| AAAGGGATAGGGACAGGGAG+CGG | - | chr5_4:50444205-50444224 | Msa0856090:intron | 55.0% | |
| ACAGGGACCGAGAAAGGGAT+AGG | - | chr5_4:50444241-50444260 | Msa0856090:intron | 55.0% | |
| CAGGGACCGAGAAAGGGATA+GGG | - | chr5_4:50444242-50444261 | Msa0856090:intron | 55.0% | |
| AAGATACAGGGATCGGGACC+GGG | - | chr5_4:50444320-50444339 | Msa0856090:intron | 55.0% | |
| ACCGGGATAGGGACTATGAG+AGG | - | chr5_4:50444337-50444356 | Msa0856090:intron | 55.0% | |
| CCCTCTCATAGTCCCTATCC+CGG | + | chr5_4:50444341-50444360 | None:intergenic | 55.0% | |
| CCGGGATAGGGACTATGAGA+GGG | - | chr5_4:50444338-50444357 | Msa0856090:intron | 55.0% | |
| ATGAGAGGGACAGATCCAGG+AGG | - | chr5_4:50444352-50444371 | Msa0856090:intron | 55.0% | |
| TGAGAGGGACAGATCCAGGA+GGG | - | chr5_4:50444353-50444372 | Msa0856090:intron | 55.0% | |
| GGACAGATCCAGGAGGGATA+GGG | - | chr5_4:50444359-50444378 | Msa0856090:intron | 55.0% | |
| CGCAGAGAGAGAAAGTAGCC+GGG | - | chr5_4:50444422-50444441 | Msa0856090:intron | 55.0% | |
| GTAGTAGGCGCCATCACAGT+AGG | - | chr5_4:50444469-50444488 | Msa0856090:intron | 55.0% | |
| GTCGGAGTAGAAGTAGGAGC+AGG | - | chr5_4:50444493-50444512 | Msa0856090:intron | 55.0% | |
| AGCCGAAGTCAGAGCCAAGT+TGG | - | chr5_4:50444516-50444535 | Msa0856090:intron | 55.0% | |
| !! | GTGGACTAGAGCGTGAGTCA+TGG | + | chr5_4:50444551-50444570 | None:intergenic | 55.0% |
| CGCTCTAGTCCACAGAGAGA+TGG | - | chr5_4:50444558-50444577 | Msa0856090:intron | 55.0% | |
| CGACAGTTCCCCGTCATCCA+TGG | + | chr5_4:50439764-50439783 | None:intergenic | 60.0% | |
| !! | TGGATGACGGGGAACTGTCG+TGG | - | chr5_4:50439764-50439783 | Msa0856090:intron | 60.0% |
| GGAAGGTCGATAGCAGCCAC+GGG | + | chr5_4:50440733-50440752 | None:intergenic | 60.0% | |
| GGGAAGGTCGATAGCAGCCA+CGG | + | chr5_4:50440734-50440753 | None:intergenic | 60.0% | |
| CACCGACAGGTGGGCATTAC+AGG | + | chr5_4:50443203-50443222 | None:intergenic | 60.0% | |
| CCAGCAACTCCCCTATACCC+AGG | + | chr5_4:50443304-50443323 | None:intergenic | 60.0% | |
| CCTGGGTATAGGGGAGTTGC+TGG | - | chr5_4:50443301-50443320 | Msa0856090:intron | 60.0% | |
| ACAGGGGAAACCACCCGTCA+CGG | - | chr5_4:50443985-50444004 | Msa0856090:five_prime_UTR | 60.0% | |
| ! | GTCATCAGAACCGTGACGGG+TGG | + | chr5_4:50443998-50444017 | None:intergenic | 60.0% |
| CGCCACATCGAGCCTCTACA+AGG | - | chr5_4:50444076-50444095 | Msa0856090:intron | 60.0% | |
| CAGGGACAGGGACCGAGAAA+GGG | - | chr5_4:50444236-50444255 | Msa0856090:intron | 60.0% | |
| GGGACAGATCCAGGAGGGAT+AGG | - | chr5_4:50444358-50444377 | Msa0856090:intron | 60.0% | |
| GGCGCCATCACAGTAGGAGT+CGG | - | chr5_4:50444475-50444494 | Msa0856090:intron | 60.0% | |
| AGAGCGTGAGTCATGGCGTG+CGG | + | chr5_4:50444544-50444563 | None:intergenic | 60.0% | |
| CCTTTCTCGGTCCCTGTCCC+TGG | + | chr5_4:50444238-50444257 | None:intergenic | 65.0% | |
| CCAGGGACAGGGACCGAGAA+AGG | - | chr5_4:50444235-50444254 | Msa0856090:intron | 65.0% | |
| ACAGGGATCGGGACCGGGAT+AGG | - | chr5_4:50444325-50444344 | Msa0856090:intron | 65.0% | |
| CAGGGATCGGGACCGGGATA+GGG | - | chr5_4:50444326-50444345 | Msa0856090:intron | 65.0% | |
| CTCTCGGTCCCTATCCCTCC+TGG | + | chr5_4:50444370-50444389 | None:intergenic | 65.0% | |
| ! | CATGGCGTGCGGTGCCAACT+TGG | + | chr5_4:50444533-50444552 | None:intergenic | 65.0% |
| ACAGGGAGCGGTCACGCTCC+AGG | - | chr5_4:50444217-50444236 | Msa0856090:intron | 70.0% | |
| CAGGGAGCGGTCACGCTCCA+GGG | - | chr5_4:50444218-50444237 | Msa0856090:intron | 70.0% | |
| AGCGGTCACGCTCCAGGGAC+AGG | - | chr5_4:50444223-50444242 | Msa0856090:intron | 70.0% | |
| GCGGTCACGCTCCAGGGACA+GGG | - | chr5_4:50444224-50444243 | Msa0856090:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 50438396 | 50445190 | 50438396 | ID=Msa0856090;Name=Msa0856090 |
| chr5_4 | mRNA | 50438396 | 50445190 | 50438396 | ID=Msa0856090-mRNA-1;Parent=Msa0856090;Name=Msa0856090-mRNA-1;_AED=0.12;_eAED=0.12;_QI=221|0.8|0.83|1|0.8|0.66|6|450|459 |
| chr5_4 | exon | 50438396 | 50439703 | 50438396 | ID=Msa0856090-mRNA-1:exon:15817;Parent=Msa0856090-mRNA-1 |
| chr5_4 | exon | 50441026 | 50441106 | 50441026 | ID=Msa0856090-mRNA-1:exon:15816;Parent=Msa0856090-mRNA-1 |
| chr5_4 | exon | 50441324 | 50441395 | 50441324 | ID=Msa0856090-mRNA-1:exon:15815;Parent=Msa0856090-mRNA-1 |
| chr5_4 | exon | 50442236 | 50442316 | 50442236 | ID=Msa0856090-mRNA-1:exon:15814;Parent=Msa0856090-mRNA-1 |
| chr5_4 | exon | 50443694 | 50444085 | 50443694 | ID=Msa0856090-mRNA-1:exon:15813;Parent=Msa0856090-mRNA-1 |
| chr5_4 | exon | 50445074 | 50445190 | 50445074 | ID=Msa0856090-mRNA-1:exon:15812;Parent=Msa0856090-mRNA-1 |
| chr5_4 | five_prime_UTR | 50445074 | 50445190 | 50445074 | ID=Msa0856090-mRNA-1:five_prime_utr;Parent=Msa0856090-mRNA-1 |
| chr5_4 | five_prime_UTR | 50443982 | 50444085 | 50443982 | ID=Msa0856090-mRNA-1:five_prime_utr;Parent=Msa0856090-mRNA-1 |
| chr5_4 | CDS | 50443694 | 50443981 | 50443694 | ID=Msa0856090-mRNA-1:cds;Parent=Msa0856090-mRNA-1 |
| chr5_4 | CDS | 50442236 | 50442316 | 50442236 | ID=Msa0856090-mRNA-1:cds;Parent=Msa0856090-mRNA-1 |
| chr5_4 | CDS | 50441324 | 50441395 | 50441324 | ID=Msa0856090-mRNA-1:cds;Parent=Msa0856090-mRNA-1 |
| chr5_4 | CDS | 50441026 | 50441106 | 50441026 | ID=Msa0856090-mRNA-1:cds;Parent=Msa0856090-mRNA-1 |
| chr5_4 | CDS | 50438846 | 50439703 | 50438846 | ID=Msa0856090-mRNA-1:cds;Parent=Msa0856090-mRNA-1 |
| chr5_4 | three_prime_UTR | 50438396 | 50438845 | 50438396 | ID=Msa0856090-mRNA-1:three_prime_utr;Parent=Msa0856090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
