AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1203880

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1203880 MtrunA17_Chr8g0375101 97.085 343 7 1 1 340 1 343 0.0 671
Msa1203880 MtrunA17_Chr5g0402191 76.000 375 67 7 1 354 1 373 0.0 537
Msa1203880 MtrunA17_Chr3g0101061 35.922 206 113 5 5 194 41 243 9.21e-32 125
Msa1203880 MtrunA17_Chr3g0101061 27.803 223 122 4 80 299 31 217 4.06e-20 92.0
Msa1203880 MtrunA17_Chr5g0447761 35.176 199 110 5 2 184 4 199 1.05e-30 122
Msa1203880 MtrunA17_Chr2g0290191 28.866 388 220 13 1 354 1 366 2.01e-30 121
Msa1203880 MtrunA17_Chr1g0186351 33.333 198 108 4 2 177 4 199 5.47e-27 111
Msa1203880 MtrunA17_Chr1g0186351 27.149 221 131 3 90 309 7 198 1.19e-19 90.5
Msa1203880 MtrunA17_Chr3g0135111 27.698 278 166 5 90 366 11 254 2.22e-24 103
Msa1203880 MtrunA17_Chr3g0135111 33.508 191 104 4 2 169 8 198 5.01e-24 102
Msa1203880 MtrunA17_Chr6g0449481 28.902 173 118 2 5 172 46 218 1.49e-21 95.1
Msa1203880 MtrunA17_Chr3g0120721 27.976 168 116 2 5 167 19 186 7.87e-21 92.8
Msa1203880 MtrunA17_Chr8g0360551 27.564 156 106 3 1 149 70 225 2.23e-14 74.3
Msa1203880 MtrunA17_Chr4g0026301 23.864 264 173 7 3 251 189 439 1.46e-13 72.0
Msa1203880 MtrunA17_Chr4g0045921 26.554 177 126 2 3 176 75 250 2.59e-13 70.5
Msa1203880 MtrunA17_Chr1g0179701 23.188 276 166 9 5 272 151 388 5.57e-12 67.4
Msa1203880 MtrunA17_Chr7g0255011 21.557 167 113 4 4 152 127 293 2.42e-11 65.1
Msa1203880 MtrunA17_Chr3g0116631 32.215 149 89 5 2 138 107 255 3.25e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1203880 AT4G36960.1 68.876 347 86 6 3 327 2 348 2.74e-162 460
Msa1203880 AT4G36960.2 68.876 347 86 6 3 327 2 348 2.74e-162 460
Msa1203880 AT5G55550.5 31.148 244 142 7 5 224 7 248 7.35e-32 125
Msa1203880 AT5G55550.5 30.924 249 134 8 88 330 5 221 1.49e-21 96.3
Msa1203880 AT5G55550.4 31.148 244 142 7 5 224 7 248 7.35e-32 125
Msa1203880 AT5G55550.4 30.924 249 134 8 88 330 5 221 1.49e-21 96.3
Msa1203880 AT5G55550.9 31.148 244 142 7 5 224 7 248 7.35e-32 125
Msa1203880 AT5G55550.9 30.924 249 134 8 88 330 5 221 1.49e-21 96.3
Msa1203880 AT5G55550.7 31.148 244 142 7 5 224 7 248 7.35e-32 125
Msa1203880 AT5G55550.7 30.924 249 134 8 88 330 5 221 1.49e-21 96.3
Msa1203880 AT5G55550.1 31.148 244 142 7 5 224 7 248 7.35e-32 125
Msa1203880 AT5G55550.1 30.924 249 134 8 88 330 5 221 1.49e-21 96.3
Msa1203880 AT5G55550.2 31.148 244 142 7 5 224 7 248 8.52e-32 125
Msa1203880 AT5G55550.2 30.924 249 134 8 88 330 5 221 1.31e-21 96.7
Msa1203880 AT5G55550.3 31.148 244 142 7 5 224 7 248 8.52e-32 125
Msa1203880 AT5G55550.3 30.924 249 134 8 88 330 5 221 1.31e-21 96.7
Msa1203880 AT5G55550.6 31.148 244 142 7 5 224 7 248 8.52e-32 125
Msa1203880 AT5G55550.6 30.924 249 134 8 88 330 5 221 1.31e-21 96.7
Msa1203880 AT5G55550.11 31.148 244 142 7 5 224 7 248 8.52e-32 125
Msa1203880 AT5G55550.11 30.924 249 134 8 88 330 5 221 1.31e-21 96.7
Msa1203880 AT4G26650.2 33.333 222 115 6 1 191 1 220 5.70e-31 123
Msa1203880 AT4G26650.1 33.810 210 114 5 5 191 16 223 7.49e-31 122
Msa1203880 AT3G07810.1 37.624 202 104 7 2 184 4 202 5.23e-30 120
Msa1203880 AT3G07810.2 37.624 202 104 7 2 184 4 202 6.11e-30 120
Msa1203880 AT4G14300.1 35.484 186 100 3 2 167 4 189 1.20e-29 119
Msa1203880 AT4G14300.1 29.108 213 120 3 90 301 7 189 3.00e-19 89.4
Msa1203880 AT4G14300.2 35.484 186 100 3 2 167 4 189 1.20e-29 119
Msa1203880 AT4G14300.2 29.108 213 120 3 90 301 7 189 3.00e-19 89.4
Msa1203880 AT2G33410.1 35.484 186 100 3 2 167 4 189 1.55e-28 115
Msa1203880 AT2G33410.1 26.512 215 123 6 90 301 7 189 3.19e-18 85.9
Msa1203880 AT1G17640.2 35.882 170 101 3 5 166 67 236 1.81e-26 109
Msa1203880 AT1G17640.1 35.882 170 101 3 5 166 67 236 1.81e-26 109
Msa1203880 AT1G17640.3 35.882 170 101 3 5 166 67 236 1.81e-26 109
Msa1203880 AT5G47620.1 33.880 183 105 3 1 167 3 185 5.73e-26 108
Msa1203880 AT5G47620.1 27.313 227 127 4 90 315 7 196 2.14e-20 92.8
Msa1203880 AT5G47620.2 33.880 183 105 3 1 167 3 185 5.73e-26 108
Msa1203880 AT5G47620.2 27.313 227 127 4 90 315 7 196 2.14e-20 92.8
Msa1203880 AT5G47620.5 33.880 183 105 3 1 167 3 185 5.73e-26 108
Msa1203880 AT5G47620.5 27.313 227 127 4 90 315 7 196 2.14e-20 92.8
Msa1203880 AT5G55550.8 26.117 291 142 8 5 224 7 295 5.74e-24 103
Msa1203880 AT5G55550.8 28.571 266 165 8 88 330 5 268 8.67e-18 85.1
Msa1203880 AT5G55550.10 26.117 291 142 8 5 224 7 295 6.41e-24 103
Msa1203880 AT5G55550.10 28.571 266 165 8 88 330 5 268 6.50e-18 85.9
Msa1203880 AT1G58470.2 29.075 227 129 4 5 199 7 233 4.94e-22 96.7
Msa1203880 AT1G58470.2 27.660 235 142 6 90 318 7 219 1.71e-17 83.6
Msa1203880 AT1G58470.1 29.075 227 129 4 5 199 7 233 4.94e-22 96.7
Msa1203880 AT1G58470.1 27.660 235 142 6 90 318 7 219 1.71e-17 83.6
Msa1203880 AT5G47620.4 30.732 205 104 4 1 167 3 207 5.18e-22 97.8
Msa1203880 AT5G47620.4 26.957 230 146 6 90 315 7 218 2.29e-18 86.7
Msa1203880 AT3G13224.1 28.643 199 96 3 90 287 20 173 4.08e-19 85.9
Msa1203880 AT3G13224.1 27.950 161 111 2 5 160 20 180 1.76e-16 78.6
Msa1203880 AT3G13224.1 41.176 85 47 1 224 308 20 101 9.53e-11 62.0
Msa1203880 AT5G40490.1 28.571 168 115 2 5 167 43 210 6.43e-19 88.2
Msa1203880 AT5G40490.1 46.053 76 41 0 224 299 43 118 1.30e-11 66.2
Msa1203880 AT3G13224.3 28.070 171 116 3 4 167 10 180 1.37e-18 86.7
Msa1203880 AT5G40490.2 29.801 151 101 2 22 167 43 193 7.15e-18 85.1
Msa1203880 AT3G13224.2 27.647 170 116 3 5 167 20 189 8.12e-18 84.3
Msa1203880 AT3G15010.1 28.205 156 105 3 1 149 72 227 4.04e-14 73.9
Msa1203880 AT3G15010.2 28.205 156 105 3 1 149 72 227 4.04e-14 73.9
Msa1203880 AT2G41060.1 22.699 163 112 4 4 152 128 290 6.54e-13 70.1
Msa1203880 AT2G41060.3 22.699 163 112 4 4 152 128 290 6.54e-13 70.1
Msa1203880 AT2G41060.2 22.699 163 112 4 4 152 128 290 6.54e-13 70.1
Msa1203880 AT4G34110.1 23.741 278 166 9 5 272 125 366 6.16e-12 67.8
Msa1203880 AT5G54900.1 26.772 254 142 9 35 280 94 311 7.32e-12 66.6
Msa1203880 AT5G47620.3 32.353 170 79 6 214 352 37 201 2.35e-11 65.1
Msa1203880 AT3G56860.9 21.839 174 106 4 4 152 140 308 8.49e-11 63.9
Msa1203880 AT3G56860.11 21.839 174 106 4 4 152 140 308 8.49e-11 63.9
Msa1203880 AT3G56860.8 21.839 174 106 4 4 152 140 308 8.49e-11 63.9
Msa1203880 AT3G56860.5 21.839 174 106 4 4 152 140 308 8.49e-11 63.9
Msa1203880 AT3G56860.7 21.839 174 106 4 4 152 140 308 8.49e-11 63.9
Msa1203880 AT3G56860.2 21.839 174 106 4 4 152 140 308 8.49e-11 63.9
Msa1203880 AT3G56860.6 21.839 174 106 4 4 152 140 308 8.49e-11 63.9
Msa1203880 AT3G56860.10 21.839 174 106 4 4 152 140 308 8.49e-11 63.9
Msa1203880 AT3G56860.3 21.839 174 106 4 4 152 140 308 8.49e-11 63.9
Msa1203880 AT3G56860.1 21.839 174 106 4 4 152 140 308 8.49e-11 63.9
Msa1203880 AT3G56860.4 21.839 174 106 4 4 152 140 308 8.49e-11 63.9
Msa1203880 AT1G60000.1 27.746 173 114 5 5 167 86 257 8.89e-11 62.4

Find 124 sgRNAs with CRISPR-Local

Find 395 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCGTCCAAGTTCTATTTA+TGG 0.167135 8_1:-59090384 Msa1203880:CDS
AGCGCGATTACCTGCGATTT+AGG 0.186637 8_1:-59094677 Msa1203880:five_prime_UTR
TGAATAGCATGGATTCTTTC+AGG 0.201125 8_1:-59089483 Msa1203880:CDS
GAAGATCTTCGCCTGTATTT+TGG 0.207885 8_1:-59090209 Msa1203880:CDS
ACTGGCCGATCTCGCGGTTT+TGG 0.221192 8_1:-59093567 Msa1203880:CDS
AAAGAATATATGAGCAAATT+TGG 0.238823 8_1:-59094148 Msa1203880:CDS
CTCCATTAAAATCTTGAATT+AGG 0.266356 8_1:+59094331 None:intergenic
TTTATTTAGCAGTTGGGTTA+TGG 0.277535 8_1:-59088685 Msa1203880:intron
AGACCTGGTCATAGAGGTTT+TGG 0.289763 8_1:-59090066 Msa1203880:CDS
GCGCGATTACCTGCGATTTA+GGG 0.303387 8_1:-59094676 Msa1203880:five_prime_UTR
ATATCCTAATTGTGGTGTTC+TGG 0.305397 8_1:+59090473 None:intergenic
GAAAGTCCTGTGAGGCCTTA+TGG 0.318356 8_1:-59089427 Msa1203880:CDS
ATGGATTCTTTCAGGGGATA+TGG 0.318639 8_1:-59089475 Msa1203880:CDS
CACCTTGTGTGATATTGAAT+TGG 0.321884 8_1:+59094641 None:intergenic
ACAGGACTTTCATCAAAATA+AGG 0.344025 8_1:+59089439 None:intergenic
AAATGTTACACGTGGTCTTA+AGG 0.359834 8_1:+59088318 None:intergenic
AAAGTCCTGTGAGGCCTTAT+GGG 0.365563 8_1:-59089426 Msa1203880:CDS
AAGAGGTGCGGCTGAATCTA+TGG 0.366406 8_1:+59089537 None:intergenic
TACCTCCAATCTGTTCTTGA+TGG 0.370499 8_1:+59088646 None:intergenic
AGAACCAGAACACCACAATT+AGG 0.378388 8_1:-59090477 Msa1203880:CDS
AAAACCATGCTCTCCTAGTA+TGG 0.385185 8_1:+59088619 None:intergenic
GGTGTTCTGGTTCTGCCAAT+TGG 0.387485 8_1:+59090486 None:intergenic
AAAATTGGAACATACTAAAC+TGG 0.396823 8_1:+59088372 None:intergenic
AAAGATTACCAGAATCTTTG+TGG 0.400937 8_1:-59093208 Msa1203880:CDS
GATGAAAGAAACCCATGAAC+TGG 0.405707 8_1:-59091987 Msa1203880:CDS
TCTTAGATGTTTATATTCCT+AGG 0.408577 8_1:-59090172 Msa1203880:CDS
AGATCTTCAGTGGTTGCCTC+CGG 0.409448 8_1:+59090224 None:intergenic
AGGGAGCGAGTGTGAGGAGG+AGG 0.410780 8_1:-59094442 Msa1203880:five_prime_UTR
CGAAGACCTCATGAGATTTG+TGG 0.411182 8_1:-59090000 Msa1203880:CDS
CCTGGCACCCAAGTAGCATT+AGG 0.419075 8_1:+59088579 None:intergenic
AATCCTGGCCACAAAGATTC+TGG 0.420843 8_1:+59093200 None:intergenic
GAATATAAACATCTAAGATA+TGG 0.428824 8_1:+59090177 None:intergenic
GAAGATGATTTCAAGCCAAT+TGG 0.431236 8_1:-59090501 Msa1203880:CDS
AAGACCTTCACAGCAGTTCC+TGG 0.436851 8_1:+59088561 None:intergenic
TGAATCTTGTATTCTTTCAC+TGG 0.436875 8_1:-59088440 Msa1203880:three_prime_UTR
ACGTCGGTTTAGCTATGAAC+CGG 0.444054 8_1:+59094753 None:intergenic
TGAAGGTCTTCTATTAAGAA+TGG 0.446166 8_1:-59088548 Msa1203880:exon
CCTAATGCTACTTGGGTGCC+AGG 0.447386 8_1:-59088579 Msa1203880:CDS
ATTGTATTCCTAATGCTACT+TGG 0.448065 8_1:-59088587 Msa1203880:CDS
GTATTATCAGCACTAAGTGT+TGG 0.449062 8_1:-59088519 Msa1203880:three_prime_UTR
GGCCAAATCTTCCAAAATAC+AGG 0.460551 8_1:+59090198 None:intergenic
TGTTACTGAAGGAGCAATCC+TGG 0.462357 8_1:+59093185 None:intergenic
AATACAAGATTCAAGTTCAA+TGG 0.471387 8_1:+59088450 None:intergenic
GAATAGCATGGATTCTTTCA+GGG 0.472134 8_1:-59089482 Msa1203880:CDS
TTTATCACTTTCGCAACTGC+AGG 0.473517 8_1:-59092706 Msa1203880:intron
GATCTTCAGTGGTTGCCTCC+GGG 0.485189 8_1:+59090225 None:intergenic
TTACCAGAATCTTTGTGGCC+AGG 0.489407 8_1:-59093203 Msa1203880:CDS
CCTAGGTTTACTAAGCGGTT+CGG 0.491078 8_1:-59094784 Msa1203880:five_prime_UTR
CTTAGATGTTTATATTCCTA+GGG 0.492283 8_1:-59090171 Msa1203880:intron
CTATCGTACATTCTCCCATA+AGG 0.499170 8_1:+59089412 None:intergenic
AAAGTTTCTTCTGTTACTGA+AGG 0.500175 8_1:+59093174 None:intergenic
GTCGCCAAGACTGTGTTCAC+TGG 0.503081 8_1:+59093407 None:intergenic
ACCTTGTGTGATATTGAATT+GGG 0.504125 8_1:+59094642 None:intergenic
TCATCAAAATAAGGCCTCAC+TGG 0.510366 8_1:+59089448 None:intergenic
TTGTATTCCTAATGCTACTT+GGG 0.510474 8_1:-59088586 Msa1203880:CDS
CTGGGACCTGCTTCATCAAG+AGG 0.513895 8_1:+59089520 None:intergenic
ATGAAAGAAACCCATGAACT+GGG 0.513956 8_1:-59091986 Msa1203880:CDS
CTTGGACGATCATACATAGT+TGG 0.515791 8_1:+59090396 None:intergenic
CCATGGGATGTTGATACTGA+TGG 0.519314 8_1:-59094175 Msa1203880:CDS
GGTGCCAGGAACTGCTGTGA+AGG 0.523218 8_1:-59088565 Msa1203880:CDS
GTGAACACAGTCTTGGCGAC+AGG 0.529494 8_1:-59093404 Msa1203880:CDS
TTGGAGGTATAGACCATACT+AGG 0.531535 8_1:-59088632 Msa1203880:CDS
TGGATATGTGACATTCGTAT+CGG 0.534136 8_1:-59093547 Msa1203880:CDS
CGGTCAACTGGCCGATCTCG+CGG 0.534170 8_1:-59093573 Msa1203880:CDS
CATATCCAAAACCGCGAGAT+CGG 0.538309 8_1:+59093562 None:intergenic
GCCGCACCTCTTGATGAAGC+AGG 0.539023 8_1:-59089526 Msa1203880:CDS
TTACTTCCATAAATAGAACT+TGG 0.539729 8_1:+59090378 None:intergenic
CGTATCGGTGGATGATGCTA+AGG 0.542839 8_1:-59093532 Msa1203880:intron
CCATCAGTATCAACATCCCA+TGG 0.548183 8_1:+59094175 None:intergenic
AATAGCATGGATTCTTTCAG+GGG 0.553215 8_1:-59089481 Msa1203880:CDS
GATTCTTTCAGGGGATATGG+TGG 0.557418 8_1:-59089472 Msa1203880:CDS
GAAGACCATCAAGAACAGAT+TGG 0.558221 8_1:-59088651 Msa1203880:CDS
ATTCTCCCATAAGGCCTCAC+AGG 0.558379 8_1:+59089421 None:intergenic
CTATCCAGTGAACACAGTCT+TGG 0.560974 8_1:-59093411 Msa1203880:CDS
GAATACTATGTTGAATAGCA+TGG 0.561559 8_1:-59089494 Msa1203880:CDS
AAATCAAAACCCTAAATCGC+AGG 0.564662 8_1:+59094667 None:intergenic
GTCAAGAGACCTGGTCATAG+AGG 0.564977 8_1:-59090072 Msa1203880:CDS
GCTGCATATCTAGTTGATGC+AGG 0.566523 8_1:+59090429 None:intergenic
TAAATTGAAGGAGGAGATGA+GGG 0.569318 8_1:-59093241 Msa1203880:intron
TTGATGAAGCAGGTCCCAGC+GGG 0.569473 8_1:-59089516 Msa1203880:CDS
TCAACTAGATATGCAGCACT+TGG 0.574058 8_1:-59090423 Msa1203880:CDS
ATTCAACATAGTATTCCCGC+TGG 0.576854 8_1:+59089501 None:intergenic
ATCTTCAGTGGTTGCCTCCG+GGG 0.582125 8_1:+59090226 None:intergenic
ATGAATATCATTAAACACCT+AGG 0.583141 8_1:-59094801 Msa1203880:five_prime_UTR
ATTTATTTCCAACAGGATCG+TGG 0.586353 8_1:-59092754 Msa1203880:intron
ATCTAGGATGTCAAGAGACC+TGG 0.586442 8_1:-59090081 Msa1203880:intron
TGCAGGGAGCGAGTGTGAGG+AGG 0.589729 8_1:-59094445 Msa1203880:intron
AGTCAAAGTGGCCACACCAA+AGG 0.591082 8_1:-59093373 Msa1203880:intron
TCTTCAGTGGTTGCCTCCGG+GGG 0.593961 8_1:+59090227 None:intergenic
ATTCGTTAAAACCTTTGGTG+TGG 0.596309 8_1:+59093362 None:intergenic
GGTTGATCGAGCAACACCTA+AGG 0.598411 8_1:-59091948 Msa1203880:intron
TCCCAATTCAATATCACACA+AGG 0.602179 8_1:-59094643 Msa1203880:intron
CGTCGGTTTAGCTATGAACC+GGG 0.603497 8_1:+59094754 None:intergenic
GGGAGCGAGTGTGAGGAGGA+GGG 0.608497 8_1:-59094441 Msa1203880:five_prime_UTR
GACCATCAAGAACAGATTGG+AGG 0.610737 8_1:-59088648 Msa1203880:CDS
GTAAATTGAAGGAGGAGATG+AGG 0.611912 8_1:-59093242 Msa1203880:intron
TATGCACTATATCCTAATTG+TGG 0.612610 8_1:+59090465 None:intergenic
CAGGACGCTGGAAGTCAAAG+TGG 0.614802 8_1:-59093385 Msa1203880:CDS
AATGGAGCAACGAAAGCTTG+TGG 0.618865 8_1:-59094315 Msa1203880:intron
ACCTGCTTCATCAAGAGGTG+CGG 0.620107 8_1:+59089525 None:intergenic
TATTTGCGTTGCAGATTCTG+TGG 0.620366 8_1:-59092017 Msa1203880:intron
GAAAGAAACCCATGAACTGG+GGG 0.622961 8_1:-59091984 Msa1203880:CDS
AACAGATTTATATATGCCAA+AGG 0.623364 8_1:-59092974 Msa1203880:intron
CATGGGATGTTGATACTGAT+GGG 0.625869 8_1:-59094174 Msa1203880:CDS
TAGACCATACTAGGAGAGCA+TGG 0.630667 8_1:-59088623 Msa1203880:CDS
TTCAACATAGTATTCCCGCT+GGG 0.636793 8_1:+59089502 None:intergenic
GGGGATATGGTGGTCCAGTG+AGG 0.637555 8_1:-59089462 Msa1203880:CDS
GTGTGCAGGGAGCGAGTGTG+AGG 0.648291 8_1:-59094448 Msa1203880:intron
TTAGGAGGAGAACCCGCCCG+TGG 0.653107 8_1:-59090281 Msa1203880:intron
ATATGTGACATTCGTATCGG+TGG 0.654752 8_1:-59093544 Msa1203880:CDS
AAACCAAAACCTCTATGACC+AGG 0.657073 8_1:+59090063 None:intergenic
CATCAGTATCAACATCCCAT+GGG 0.657850 8_1:+59094176 None:intergenic
TCGTGTCCACAAATCTCATG+AGG 0.660049 8_1:+59089994 None:intergenic
TAGGAGGAGAACCCGCCCGT+GGG 0.661910 8_1:-59090280 Msa1203880:CDS
TGAAAGAAACCCATGAACTG+GGG 0.667691 8_1:-59091985 Msa1203880:CDS
CCGAACCGCTTAGTAAACCT+AGG 0.685243 8_1:+59094784 None:intergenic
ATACAGGCGAAGATCTTCAG+TGG 0.686546 8_1:+59090214 None:intergenic
TCATGAGATTTGTGGACACG+AGG 0.697795 8_1:-59089992 Msa1203880:intron
AAACACCTAGGTTTACTAAG+CGG 0.698699 8_1:-59094789 Msa1203880:five_prime_UTR
CTTGATGAAGCAGGTCCCAG+CGG 0.706120 8_1:-59089517 Msa1203880:CDS
TGTGCATAAAACATCCACGT+CGG 0.713129 8_1:+59094737 None:intergenic
GGTTCATAGCTAAACCGACG+TGG 0.724426 8_1:-59094751 Msa1203880:five_prime_UTR
AAAGAAACCCATGAACTGGG+GGG 0.745104 8_1:-59091983 Msa1203880:CDS
GTAGCATTAGGAATACAATG+CGG 0.835615 8_1:+59088591 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTAAAAATTGAAAAATAAAT+AGG + chr8_1:59088734-59088753 None:intergenic 10.0%
!!! CTATTTATTTTTCAATTTTT+AGG - chr8_1:59088732-59088751 Msa1203880:intron 10.0%
!!! TTTATTTATGTTTGTATTTT+AGG - chr8_1:59089507-59089526 Msa1203880:CDS 10.0%
!!! TTGAACTTATATTTATTTTA+TGG - chr8_1:59090750-59090769 Msa1203880:intron 10.0%
!!! TGAACTTATATTTATTTTAT+GGG - chr8_1:59090751-59090770 Msa1203880:intron 10.0%
!! ACAAAAAAAAAAAAATTATC+TGG + chr8_1:59094634-59094653 None:intergenic 10.0%
!! TTGAAAAATAAATAGGAAAA+GGG + chr8_1:59088727-59088746 None:intergenic 15.0%
!! ATTGAAAAATAAATAGGAAA+AGG + chr8_1:59088728-59088747 None:intergenic 15.0%
!!! AAAATTGTATATTAGGTTTT+GGG - chr8_1:59088903-59088922 Msa1203880:intron 15.0%
!! TATTTAATATATAAATTGGG+AGG - chr8_1:59089120-59089139 Msa1203880:intron 15.0%
!!! AACTTATTGTTATTTTCTTT+GGG - chr8_1:59089365-59089384 Msa1203880:intron 15.0%
!! AATAAATAGACAAATATTGA+AGG + chr8_1:59090910-59090929 None:intergenic 15.0%
!! TCTATTTATTAAAAGTTTCT+GGG - chr8_1:59090920-59090939 Msa1203880:intron 15.0%
!!! ACATTAATTTTGAAATCAAA+TGG - chr8_1:59091020-59091039 Msa1203880:intron 15.0%
!!! TATAGTTTGTATTTTATAAC+TGG - chr8_1:59091656-59091675 Msa1203880:intron 15.0%
!! TTAACAAAAGTAAAAAGAAA+AGG + chr8_1:59092561-59092580 None:intergenic 15.0%
!! TTTAATCATTATGAAAAAGA+TGG - chr8_1:59094278-59094297 Msa1203880:intron 15.0%
!! GTTCATGAAAATTGTATATT+AGG - chr8_1:59088896-59088915 Msa1203880:intron 20.0%
!!! GAAAATTGTATATTAGGTTT+TGG - chr8_1:59088902-59088921 Msa1203880:intron 20.0%
!! AAAGAATATATGAGCAAATT+TGG - chr8_1:59088957-59088976 Msa1203880:intron 20.0%
!! TTTATATATTGAGTGTGATA+AGG + chr8_1:59089231-59089250 None:intergenic 20.0%
!! GAGAAATAATAGAAAAAGAA+TGG - chr8_1:59089337-59089356 Msa1203880:intron 20.0%
!!! GAACTTATTGTTATTTTCTT+TGG - chr8_1:59089364-59089383 Msa1203880:intron 20.0%
!!! TTATGTTTGTATTTTAGGAA+CGG - chr8_1:59089512-59089531 Msa1203880:CDS 20.0%
!! AATTTGTAGTATTTCTTCTT+TGG - chr8_1:59089990-59090009 Msa1203880:intron 20.0%
!! ATTTGTAGTATTTCTTCTTT+GGG - chr8_1:59089991-59090010 Msa1203880:intron 20.0%
!!! AAACATCTAAAGTTAAAATG+TGG - chr8_1:59090176-59090195 Msa1203880:CDS 20.0%
!!! TTTTATCATTTATTTCCAAC+AGG - chr8_1:59090344-59090363 Msa1203880:intron 20.0%
!! ACGATTCTAAATTAAATTTG+AGG + chr8_1:59090499-59090518 None:intergenic 20.0%
!! AATTGTAATTATGAGTTACT+TGG - chr8_1:59090793-59090812 Msa1203880:intron 20.0%
!! GTCTATTTATTAAAAGTTTC+TGG - chr8_1:59090919-59090938 Msa1203880:intron 20.0%
!! AACAGTAGAAAACATTAATA+AGG + chr8_1:59091234-59091253 None:intergenic 20.0%
!!! AGTTAATTAAGGAAAGATTT+TGG - chr8_1:59091461-59091480 Msa1203880:intron 20.0%
!!! GTTAATTAAGGAAAGATTTT+GGG - chr8_1:59091462-59091481 Msa1203880:intron 20.0%
!!! TTAATTAAGGAAAGATTTTG+GGG - chr8_1:59091463-59091482 Msa1203880:intron 20.0%
!! GTTAACTCATAACTTATTAA+AGG + chr8_1:59091861-59091880 None:intergenic 20.0%
!! TTTAATGTTTATGAGATTGA+TGG - chr8_1:59091911-59091930 Msa1203880:intron 20.0%
!!! TAGTTTAGATTGTCTAAAAT+AGG - chr8_1:59091988-59092007 Msa1203880:CDS 20.0%
!!! ATAAGCAAAAAGATTTTTGT+TGG - chr8_1:59092848-59092867 Msa1203880:intron 20.0%
!!! GAATATAAACATCTAAGATA+TGG + chr8_1:59092931-59092950 None:intergenic 20.0%
!! ATACTTATAATACACATGAA+TGG - chr8_1:59094102-59094121 Msa1203880:intron 20.0%
!!! GAATGGTTTTATAACTAATA+CGG - chr8_1:59094119-59094138 Msa1203880:intron 20.0%
!! ATTCCAAAGAAAGATAAAAT+GGG + chr8_1:59094183-59094202 None:intergenic 20.0%
!! AAAATGAATGGACAATAAAA+TGG - chr8_1:59094334-59094353 Msa1203880:exon 20.0%
!! TGTTTATTTATTTAGCAGTT+GGG - chr8_1:59094414-59094433 Msa1203880:five_prime_UTR 20.0%
!!! ACTGGTTTATAAGATTTTTT+TGG - chr8_1:59094683-59094702 Msa1203880:five_prime_UTR 20.0%
!! ATACTAGTTCAAGTAAAAAT+TGG + chr8_1:59094751-59094770 None:intergenic 20.0%
! ATGAATATCATTAAACACCT+AGG - chr8_1:59088304-59088323 Msa1203880:three_prime_UTR 25.0%
!! ATGAAATTTCAGCTTTTGAA+GGG + chr8_1:59088592-59088611 None:intergenic 25.0%
!! AGCCTAATTCAAGATTTTAA+TGG - chr8_1:59088772-59088791 Msa1203880:intron 25.0%
! CTCCATTAAAATCTTGAATT+AGG + chr8_1:59088777-59088796 None:intergenic 25.0%
! AGAAGATTGTATTGTTATGA+AGG - chr8_1:59088986-59089005 Msa1203880:intron 25.0%
! CTCGAAATTTAAAAGCAAAA+AGG + chr8_1:59089466-59089485 None:intergenic 25.0%
!!! CTTTTAAATTTCGAGTTTAC+TGG - chr8_1:59089471-59089490 Msa1203880:CDS 25.0%
! ATTTCATTCGTTAAAACCTT+TGG + chr8_1:59089751-59089770 None:intergenic 25.0%
! AGACTAGTAGTAAATAATCA+CGG + chr8_1:59089780-59089799 None:intergenic 25.0%
! TTTGTAGTATTTCTTCTTTG+GGG - chr8_1:59089992-59090011 Msa1203880:intron 25.0%
! AAATAATGCTTCCATTTCAA+CGG + chr8_1:59090053-59090072 None:intergenic 25.0%
! AACAGATTTATATATGCCAA+AGG - chr8_1:59090131-59090150 Msa1203880:intron 25.0%
!! ATCTAAAGTTAAAATGTGGT+TGG - chr8_1:59090180-59090199 Msa1203880:CDS 25.0%
! TATAGAAATACAGAGAGAAA+AGG + chr8_1:59090618-59090637 None:intergenic 25.0%
!! TCTAAAATTCTTCTGTAATC+AGG + chr8_1:59090953-59090972 None:intergenic 25.0%
! AAAATTAATGTCATGAACCA+GGG + chr8_1:59091011-59091030 None:intergenic 25.0%
!! ATCTATTGTTCTGAACTATT+GGG + chr8_1:59091355-59091374 None:intergenic 25.0%
!! AATCTATTGTTCTGAACTAT+TGG + chr8_1:59091356-59091375 None:intergenic 25.0%
!!! TTTTGTCCTTTTTAAAAACC+CGG + chr8_1:59091434-59091453 None:intergenic 25.0%
! GAGTTAACTGTTTAATCTAT+TGG - chr8_1:59091873-59091892 Msa1203880:intron 25.0%
! TAATCTATTGGATTGAATCA+TGG - chr8_1:59091885-59091904 Msa1203880:intron 25.0%
! AATGATGAAATAGAGTGAAT+TGG - chr8_1:59091936-59091955 Msa1203880:intron 25.0%
!! TTGTCTAAAATAGGATGAAA+TGG - chr8_1:59091997-59092016 Msa1203880:CDS 25.0%
! TAAAATAGGATGAAATGGAA+TGG - chr8_1:59092002-59092021 Msa1203880:CDS 25.0%
!! CTAATCTGTAATTTAGTCTT+TGG - chr8_1:59092221-59092240 Msa1203880:intron 25.0%
! ATATTTACAAGTGAAGTAAC+AGG + chr8_1:59092253-59092272 None:intergenic 25.0%
! TTATGCATGAAAATGAAAAC+TGG + chr8_1:59092493-59092512 None:intergenic 25.0%
!! TAATAAGCTGTATTCCATTT+TGG - chr8_1:59092578-59092597 Msa1203880:intron 25.0%
! TTACTTCCATAAATAGAACT+TGG + chr8_1:59092730-59092749 None:intergenic 25.0%
! TCTTAGATGTTTATATTCCT+AGG - chr8_1:59092933-59092952 Msa1203880:intron 25.0%
! CTTAGATGTTTATATTCCTA+GGG - chr8_1:59092934-59092953 Msa1203880:intron 25.0%
! ATGTAGATTCAATTCAAGTA+GGG + chr8_1:59093176-59093195 None:intergenic 25.0%
! AATGTAGATTCAATTCAAGT+AGG + chr8_1:59093177-59093196 None:intergenic 25.0%
! ACTAAAGTATAGTTGGTTAT+AGG - chr8_1:59093986-59094005 Msa1203880:intron 25.0%
! TAACTAATACGGAAAAGAAA+TGG - chr8_1:59094130-59094149 Msa1203880:CDS 25.0%
!! TTACCCATTTTATCTTTCTT+TGG - chr8_1:59094177-59094196 Msa1203880:CDS 25.0%
! GATTCCAAAGAAAGATAAAA+TGG + chr8_1:59094184-59094203 None:intergenic 25.0%
! ATGGAAAACAACACATATTA+AGG + chr8_1:59094215-59094234 None:intergenic 25.0%
! CTGTTTATTTATTTAGCAGT+TGG - chr8_1:59094413-59094432 Msa1203880:five_prime_UTR 25.0%
!! AATACAAGATTCAAGTTCAA+TGG + chr8_1:59094658-59094677 None:intergenic 25.0%
! AAAATTGGAACATACTAAAC+TGG + chr8_1:59094736-59094755 None:intergenic 25.0%
!! TTTTACTTGAACTAGTATTG+TGG - chr8_1:59094753-59094772 Msa1203880:five_prime_UTR 25.0%
ACCTTGTGTGATATTGAATT+GGG + chr8_1:59088466-59088485 None:intergenic 30.0%
!! TGAAATTTCAGCTTTTGAAG+GGG + chr8_1:59088591-59088610 None:intergenic 30.0%
! GATGAAATTTCAGCTTTTGA+AGG + chr8_1:59088593-59088612 None:intergenic 30.0%
CATCTCGTAAATGATGATAA+TGG - chr8_1:59088609-59088628 Msa1203880:CDS 30.0%
AACAACAACTAAGCGTTATT+GGG + chr8_1:59089094-59089113 None:intergenic 30.0%
TAACAACAACTAAGCGTTAT+TGG + chr8_1:59089095-59089114 None:intergenic 30.0%
!! ATTGGGAGGTGTTAAATAAT+TGG - chr8_1:59089134-59089153 Msa1203880:intron 30.0%
!! TTGGGAGGTGTTAAATAATT+GGG - chr8_1:59089135-59089154 Msa1203880:intron 30.0%
!!! ATTGGGAGTATTTTCTTCTT+CGG - chr8_1:59089152-59089171 Msa1203880:intron 30.0%
TGCATATCTAGTAAATGAGA+AGG - chr8_1:59089619-59089638 Msa1203880:intron 30.0%
!!! TGGTCTGCTTTTAAGTTATA+CGG - chr8_1:59089809-59089828 Msa1203880:intron 30.0%
ATGCTTTGCTTGTAAATTGA+AGG - chr8_1:59089852-59089871 Msa1203880:intron 30.0%
! ATTCTGGTAATCTTTTTGAC+TGG + chr8_1:59089892-59089911 None:intergenic 30.0%
AAAGATTACCAGAATCTTTG+TGG - chr8_1:59089897-59089916 Msa1203880:intron 30.0%
AAAGTTTCTTCTGTTACTGA+AGG + chr8_1:59089934-59089953 None:intergenic 30.0%
! CAGTAACAGAAGAAACTTTT+AGG - chr8_1:59089935-59089954 Msa1203880:intron 30.0%
! TAACAGAAGAAACTTTTAGG+AGG - chr8_1:59089938-59089957 Msa1203880:intron 30.0%
ATTTCTCAAAATGACTGCAA+AGG + chr8_1:59090101-59090120 None:intergenic 30.0%
!! TGCAGTCATTTTGAGAAATA+CGG - chr8_1:59090102-59090121 Msa1203880:intron 30.0%
ACTAGTATCGTGATAATCAT+TGG - chr8_1:59090542-59090561 Msa1203880:intron 30.0%
TCTATACATCAATAACACAG+AGG - chr8_1:59090632-59090651 Msa1203880:intron 30.0%
CTATACATCAATAACACAGA+GGG - chr8_1:59090633-59090652 Msa1203880:intron 30.0%
! TATTTTATGGGACATGTTGT+TGG - chr8_1:59090763-59090782 Msa1203880:intron 30.0%
AAATTAATGTCATGAACCAG+GGG + chr8_1:59091010-59091029 None:intergenic 30.0%
CAAAATTAATGTCATGAACC+AGG + chr8_1:59091012-59091031 None:intergenic 30.0%
! TCAATATCTGTTAGTCTGTA+AGG - chr8_1:59091061-59091080 Msa1203880:intron 30.0%
! TTTTCAAATATGATCTCCCA+AGG + chr8_1:59091512-59091531 None:intergenic 30.0%
CAATGACAAAACCATAAAAG+GGG + chr8_1:59091722-59091741 None:intergenic 30.0%
CCAATGACAAAACCATAAAA+GGG + chr8_1:59091723-59091742 None:intergenic 30.0%
ACCAATGACAAAACCATAAA+AGG + chr8_1:59091724-59091743 None:intergenic 30.0%
TCATTATCTGTTTATTAGCC+TGG - chr8_1:59091798-59091817 Msa1203880:intron 30.0%
AAATCATTTCCTAAAAAGCC+AGG + chr8_1:59091819-59091838 None:intergenic 30.0%
TGGAATGGAACATGATAAAA+TGG - chr8_1:59092017-59092036 Msa1203880:intron 30.0%
TCATTTCACTTCAATCGAAT+TGG + chr8_1:59092077-59092096 None:intergenic 30.0%
! CTGAATAACGAAAGTATGAA+AGG - chr8_1:59092156-59092175 Msa1203880:intron 30.0%
GCTAAACAAATATTCCAGTT+TGG + chr8_1:59092186-59092205 None:intergenic 30.0%
AATCCAAGATGTTCTCAATA+CGG - chr8_1:59092399-59092418 Msa1203880:intron 30.0%
AACAAGTTAAATAGAATGCC+GGG + chr8_1:59092437-59092456 None:intergenic 30.0%
CAACAAGTTAAATAGAATGC+CGG + chr8_1:59092438-59092457 None:intergenic 30.0%
! CATAAGTCTTTGTTTAGTGA+TGG - chr8_1:59092508-59092527 Msa1203880:intron 30.0%
TATGCACTATATCCTAATTG+TGG + chr8_1:59092643-59092662 None:intergenic 30.0%
TCTATTTATGGAAGTAAGCA+TGG - chr8_1:59092733-59092752 Msa1203880:CDS 30.0%
! AAATCTTTTTGCTTATCCCA+CGG + chr8_1:59092844-59092863 None:intergenic 30.0%
CTAGATCAAAATTGAGAGAT+GGG + chr8_1:59093010-59093029 None:intergenic 30.0%
!!! TTTTGGTTTTGTGACTTTTG+CGG - chr8_1:59093056-59093075 Msa1203880:intron 30.0%
GAATACTATGTTGAATAGCA+TGG - chr8_1:59093611-59093630 Msa1203880:intron 30.0%
ACAGGACTTTCATCAAAATA+AGG + chr8_1:59093669-59093688 None:intergenic 30.0%
CGGAAAAGAAATGGTAAATT+AGG - chr8_1:59094139-59094158 Msa1203880:CDS 30.0%
! TCCATTCATTTTACATGCAA+GGG + chr8_1:59094326-59094345 None:intergenic 30.0%
TTTATTTAGCAGTTGGGTTA+TGG - chr8_1:59094420-59094439 Msa1203880:five_prime_UTR 30.0%
ATTGTATTCCTAATGCTACT+TGG - chr8_1:59094518-59094537 Msa1203880:intron 30.0%
! TTGTATTCCTAATGCTACTT+GGG - chr8_1:59094519-59094538 Msa1203880:intron 30.0%
TGAAGGTCTTCTATTAAGAA+TGG - chr8_1:59094557-59094576 Msa1203880:intron 30.0%
TGAATCTTGTATTCTTTCAC+TGG - chr8_1:59094665-59094684 Msa1203880:five_prime_UTR 30.0%
GTACTTAAAAATGTTACACG+TGG + chr8_1:59094798-59094817 None:intergenic 30.0%
AAACACCTAGGTTTACTAAG+CGG - chr8_1:59088316-59088335 Msa1203880:three_prime_UTR 35.0%
AAATCAAAACCCTAAATCGC+AGG + chr8_1:59088441-59088460 None:intergenic 35.0%
TCCCAATTCAATATCACACA+AGG - chr8_1:59088462-59088481 Msa1203880:three_prime_UTR 35.0%
CACCTTGTGTGATATTGAAT+TGG + chr8_1:59088467-59088486 None:intergenic 35.0%
GTATCCGTGACAAAACATTA+TGG - chr8_1:59089044-59089063 Msa1203880:intron 35.0%
! TACGCCATAATGTTTTGTCA+CGG + chr8_1:59089051-59089070 None:intergenic 35.0%
ACAACAACTAAGCGTTATTG+GGG + chr8_1:59089093-59089112 None:intergenic 35.0%
!!! TTGGGAGTATTTTCTTCTTC+GGG - chr8_1:59089153-59089172 Msa1203880:intron 35.0%
ATCACGATCTTTACATAGTC+TGG - chr8_1:59089250-59089269 Msa1203880:intron 35.0%
ACATGCTTATCCATGTTTCA+TGG - chr8_1:59089285-59089304 Msa1203880:intron 35.0%
TTGTTTAGCACCATGAAACA+TGG + chr8_1:59089298-59089317 None:intergenic 35.0%
!!! TTTCTTTGGGACATTTTCTG+TGG - chr8_1:59089378-59089397 Msa1203880:intron 35.0%
TGGATATGTGACATTCGTAT+CGG - chr8_1:59089558-59089577 Msa1203880:intron 35.0%
ATTCGTTAAAACCTTTGGTG+TGG + chr8_1:59089746-59089765 None:intergenic 35.0%
!!! GGTCTGCTTTTAAGTTATAC+GGG - chr8_1:59089810-59089829 Msa1203880:intron 35.0%
!!! GTCTGCTTTTAAGTTATACG+GGG - chr8_1:59089811-59089830 Msa1203880:intron 35.0%
!!! CTTTTAAGTTATACGGGGTA+TGG - chr8_1:59089816-59089835 Msa1203880:intron 35.0%
CTTTGCTTGTAAATTGAAGG+AGG - chr8_1:59089855-59089874 Msa1203880:intron 35.0%
TAAATTGAAGGAGGAGATGA+GGG - chr8_1:59089864-59089883 Msa1203880:intron 35.0%
ATTTATTTCCAACAGGATCG+TGG - chr8_1:59090351-59090370 Msa1203880:intron 35.0%
TCAAAAACACATCGAGGAAT+TGG - chr8_1:59090375-59090394 Msa1203880:intron 35.0%
!!! TCATATTTTGCTTTTTCCCC+TGG - chr8_1:59090991-59091010 Msa1203880:intron 35.0%
ATGAAAGAAACCCATGAACT+GGG - chr8_1:59091119-59091138 Msa1203880:intron 35.0%
!! AAGCTCTAAACAATCACCTT+AGG + chr8_1:59091176-59091195 None:intergenic 35.0%
ATACCTTTATGAACGATGCA+TGG + chr8_1:59091301-59091320 None:intergenic 35.0%
ATGCATCGTTCATAAAGGTA+TGG - chr8_1:59091300-59091319 Msa1203880:intron 35.0%
!! ATTAAGGAAAGATTTTGGGG+AGG - chr8_1:59091466-59091485 Msa1203880:intron 35.0%
TTTGGGGAGGATATGTAATA+TGG - chr8_1:59091479-59091498 Msa1203880:intron 35.0%
TGTAATATGGATACTCTCCT+TGG - chr8_1:59091492-59091511 Msa1203880:intron 35.0%
GTAATATGGATACTCTCCTT+GGG - chr8_1:59091493-59091512 Msa1203880:intron 35.0%
AGTCAAAGAATCAGTCAACA+TGG - chr8_1:59091577-59091596 Msa1203880:intron 35.0%
TGGTGTGCAAATAAATACTG+AGG - chr8_1:59091597-59091616 Msa1203880:intron 35.0%
GGTGTGCAAATAAATACTGA+GGG - chr8_1:59091598-59091617 Msa1203880:intron 35.0%
ATGTATGCCCAGAGTAAAAA+GGG + chr8_1:59091690-59091709 None:intergenic 35.0%
AATGTATGCCCAGAGTAAAA+AGG + chr8_1:59091691-59091710 None:intergenic 35.0%
! TTTTACTCTGGGCATACATT+TGG - chr8_1:59091691-59091710 Msa1203880:intron 35.0%
!!! CCCTTTTATGGTTTTGTCAT+TGG - chr8_1:59091720-59091739 Msa1203880:intron 35.0%
!! GTTTATTAGCCTGGCTTTTT+AGG - chr8_1:59091807-59091826 Msa1203880:intron 35.0%
GAAAAAAGTGGGATATTGGA+TGG + chr8_1:59092050-59092069 None:intergenic 35.0%
TTCACTTCAATCGAATTGGA+GGG + chr8_1:59092073-59092092 None:intergenic 35.0%
TTTCACTTCAATCGAATTGG+AGG + chr8_1:59092074-59092093 None:intergenic 35.0%
ATGTCTAGTATGACACATGA+GGG + chr8_1:59092322-59092341 None:intergenic 35.0%
TGCATGAAAATGAAAACTGG+TGG + chr8_1:59092490-59092509 None:intergenic 35.0%
AGGCATGTATGACTATAATC+AGG + chr8_1:59092541-59092560 None:intergenic 35.0%
AAATCATCTTCCTGCCAAAA+TGG + chr8_1:59092595-59092614 None:intergenic 35.0%
GAAGATGATTTCAAGCCAAT+TGG - chr8_1:59092604-59092623 Msa1203880:intron 35.0%
ATATCCTAATTGTGGTGTTC+TGG + chr8_1:59092635-59092654 None:intergenic 35.0%
GATCGTCCAAGTTCTATTTA+TGG - chr8_1:59092721-59092740 Msa1203880:CDS 35.0%
! ACTGCTTTGAACTGTCAATT+AGG - chr8_1:59092806-59092825 Msa1203880:intron 35.0%
! AATCTTTTTGCTTATCCCAC+GGG + chr8_1:59092843-59092862 None:intergenic 35.0%
CATATTCAACTGTTGAAAGC+TGG - chr8_1:59092980-59092999 Msa1203880:CDS 35.0%
CCTAGATCAAAATTGAGAGA+TGG + chr8_1:59093011-59093030 None:intergenic 35.0%
!! CCATCTCTCAATTTTGATCT+AGG - chr8_1:59093008-59093027 Msa1203880:intron 35.0%
TGAATCTACATTTCCTCGTT+TGG - chr8_1:59093185-59093204 Msa1203880:CDS 35.0%
TACATTTCCTCGTTTGGAAA+TGG - chr8_1:59093191-59093210 Msa1203880:CDS 35.0%
! GGAAATGGCATTGAAATAAG+TGG - chr8_1:59093206-59093225 Msa1203880:CDS 35.0%
AATCATCTTTGTAGACCATC+TGG + chr8_1:59093401-59093420 None:intergenic 35.0%
GTAAGTCAAGTTTCAGAACA+AGG + chr8_1:59093466-59093485 None:intergenic 35.0%
ACAATTACGCTTGGAATACA+TGG + chr8_1:59093488-59093507 None:intergenic 35.0%
TTGACACATACAATTACGCT+TGG + chr8_1:59093497-59093516 None:intergenic 35.0%
TGAATAGCATGGATTCTTTC+AGG - chr8_1:59093622-59093641 Msa1203880:intron 35.0%
GAATAGCATGGATTCTTTCA+GGG - chr8_1:59093623-59093642 Msa1203880:intron 35.0%
AATAGCATGGATTCTTTCAG+GGG - chr8_1:59093624-59093643 Msa1203880:intron 35.0%
!! ATTTTGATGAAAGTCCTGTG+AGG - chr8_1:59093670-59093689 Msa1203880:intron 35.0%
!! CTTTCTGAAATCTGAAGACT+TGG - chr8_1:59093843-59093862 Msa1203880:intron 35.0%
CAACTATACTTTAGTGTGTC+AGG + chr8_1:59093981-59094000 None:intergenic 35.0%
CTGACACACTAAAGTATAGT+TGG - chr8_1:59093979-59093998 Msa1203880:intron 35.0%
TCCCTTGCATGTAAAATGAA+TGG - chr8_1:59094322-59094341 Msa1203880:exon 35.0%
! GTCCATTCATTTTACATGCA+AGG + chr8_1:59094327-59094346 None:intergenic 35.0%
GTAGCATTAGGAATACAATG+CGG + chr8_1:59094517-59094536 None:intergenic 35.0%
GTATTATCAGCACTAAGTGT+TGG - chr8_1:59094586-59094605 Msa1203880:intron 35.0%
GCAAAAACAAAACTTGCAAG+AGG + chr8_1:59094714-59094733 None:intergenic 35.0%
! AAATGTTACACGTGGTCTTA+AGG + chr8_1:59094790-59094809 None:intergenic 35.0%
TGTGCATAAAACATCCACGT+CGG + chr8_1:59088371-59088390 None:intergenic 40.0%
!! GAGAGATTTTGTTGTGTGCA+GGG - chr8_1:59088644-59088663 Msa1203880:CDS 40.0%
!!! ATTAGGTTTTGGGTATCCCA+TGG - chr8_1:59088913-59088932 Msa1203880:intron 40.0%
!!! TTAGGTTTTGGGTATCCCAT+GGG - chr8_1:59088914-59088933 Msa1203880:intron 40.0%
CATCAGTATCAACATCCCAT+GGG + chr8_1:59088932-59088951 None:intergenic 40.0%
CATGGGATGTTGATACTGAT+GGG - chr8_1:59088931-59088950 Msa1203880:intron 40.0%
!!! TGGGAGTATTTTCTTCTTCG+GGG - chr8_1:59089154-59089173 Msa1203880:intron 40.0%
AGGAGATTCTATACGAGAGT+AGG + chr8_1:59089190-59089209 None:intergenic 40.0%
TGATAAGGCTTCAGTTGCAA+CGG + chr8_1:59089216-59089235 None:intergenic 40.0%
!! GTATTTTAGGAACGGTCAAC+TGG - chr8_1:59089520-59089539 Msa1203880:CDS 40.0%
ATATGTGACATTCGTATCGG+TGG - chr8_1:59089561-59089580 Msa1203880:intron 40.0%
! ACTACTAGTCTAGCTAATGC+TGG - chr8_1:59089789-59089808 Msa1203880:intron 40.0%
GTAAATTGAAGGAGGAGATG+AGG - chr8_1:59089863-59089882 Msa1203880:intron 40.0%
AATCTCCGATTCCGTTGAAA+TGG - chr8_1:59090039-59090058 Msa1203880:CDS 40.0%
TGCTTCCATTTCAACGGAAT+CGG + chr8_1:59090047-59090066 None:intergenic 40.0%
!! CAAAGTGAGGAAAGTACCTT+TGG + chr8_1:59090150-59090169 None:intergenic 40.0%
AGGTACTTTCCTCACTTTGA+TGG - chr8_1:59090151-59090170 Msa1203880:intron 40.0%
GATGTTTGACCATCAAAGTG+AGG + chr8_1:59090163-59090182 None:intergenic 40.0%
! TTTTTGATCCACGATCCTGT+TGG + chr8_1:59090362-59090381 None:intergenic 40.0%
TTTATCACTTTCGCAACTGC+AGG - chr8_1:59090399-59090418 Msa1203880:CDS 40.0%
GTACCACAGACAAATAGTGA+CGG + chr8_1:59090430-59090449 None:intergenic 40.0%
!! TACTTCTGAGTTCTGAGACA+GGG - chr8_1:59090584-59090603 Msa1203880:intron 40.0%
TTCAAGTCCAGTGAAAACTG+TGG + chr8_1:59090678-59090697 None:intergenic 40.0%
TATTTGCGTTGCAGATTCTG+TGG - chr8_1:59091088-59091107 Msa1203880:intron 40.0%
GATGAAAGAAACCCATGAAC+TGG - chr8_1:59091118-59091137 Msa1203880:intron 40.0%
TGAAAGAAACCCATGAACTG+GGG - chr8_1:59091120-59091139 Msa1203880:intron 40.0%
TAGCCATGCATCGTTCATAA+AGG - chr8_1:59091295-59091314 Msa1203880:intron 40.0%
ACGATAACTCATCGATAGAC+AGG - chr8_1:59091408-59091427 Msa1203880:intron 40.0%
! TTCAGCTTCCCTTTTTACTC+TGG - chr8_1:59091679-59091698 Msa1203880:intron 40.0%
! TCAGCTTCCCTTTTTACTCT+GGG - chr8_1:59091680-59091699 Msa1203880:intron 40.0%
! ATTTGGCGTATCCCCTTTTA+TGG - chr8_1:59091708-59091727 Msa1203880:intron 40.0%
AGGGGAAAAAAGTGGGATAT+TGG + chr8_1:59092054-59092073 None:intergenic 40.0%
GAATTGGAGGGGAAAAAAGT+GGG + chr8_1:59092061-59092080 None:intergenic 40.0%
TCACTTCAATCGAATTGGAG+GGG + chr8_1:59092072-59092091 None:intergenic 40.0%
GTATGAAAGGCAAACCAAAC+TGG - chr8_1:59092169-59092188 Msa1203880:intron 40.0%
TGTCTAGTATGACACATGAG+GGG + chr8_1:59092321-59092340 None:intergenic 40.0%
CATGTCTAGTATGACACATG+AGG + chr8_1:59092323-59092342 None:intergenic 40.0%
! TGAAAACTGGTGGTGTGAAA+CGG + chr8_1:59092480-59092499 None:intergenic 40.0%
!! AAGCTGTATTCCATTTTGGC+AGG - chr8_1:59092582-59092601 Msa1203880:intron 40.0%
AGAACCAGAACACCACAATT+AGG - chr8_1:59092628-59092647 Msa1203880:intron 40.0%
TCAACTAGATATGCAGCACT+TGG - chr8_1:59092682-59092701 Msa1203880:intron 40.0%
CTTGGACGATCATACATAGT+TGG + chr8_1:59092712-59092731 None:intergenic 40.0%
! GCTTTGAACTGTCAATTAGG+AGG - chr8_1:59092809-59092828 Msa1203880:intron 40.0%
! GAAGATCTTCGCCTGTATTT+TGG - chr8_1:59092896-59092915 Msa1203880:intron 40.0%
!! CGCCTGTATTTTGGAAGATT+TGG - chr8_1:59092905-59092924 Msa1203880:intron 40.0%
GGCCAAATCTTCCAAAATAC+AGG + chr8_1:59092910-59092929 None:intergenic 40.0%
TGACATCTTAATCTCACCCT+AGG + chr8_1:59092953-59092972 None:intergenic 40.0%
AAACCAAAACCTCTATGACC+AGG + chr8_1:59093045-59093064 None:intergenic 40.0%
! TTCAATGCCATTTCCAAACG+AGG + chr8_1:59093201-59093220 None:intergenic 40.0%
CAAAAGAAATTTGCGCTGTC+AGG + chr8_1:59093357-59093376 None:intergenic 40.0%
CATGTCGAAAAATGTCCAGA+TGG - chr8_1:59093383-59093402 Msa1203880:CDS 40.0%
TTCAACATAGTATTCCCGCT+GGG + chr8_1:59093606-59093625 None:intergenic 40.0%
ATTCAACATAGTATTCCCGC+TGG + chr8_1:59093607-59093626 None:intergenic 40.0%
ATGGATTCTTTCAGGGGATA+TGG - chr8_1:59093630-59093649 Msa1203880:intron 40.0%
TCATCAAAATAAGGCCTCAC+TGG + chr8_1:59093660-59093679 None:intergenic 40.0%
CTATCGTACATTCTCCCATA+AGG + chr8_1:59093696-59093715 None:intergenic 40.0%
GACAGTAAGCTGAAGAAAAC+TGG - chr8_1:59093792-59093811 Msa1203880:intron 40.0%
AAAACGGAACTTTGGCTAAC+AGG + chr8_1:59094025-59094044 None:intergenic 40.0%
CTGTTAGCAAAACGGAACTT+TGG + chr8_1:59094033-59094052 None:intergenic 40.0%
TCCTGCTTCTGTTAGCAAAA+CGG + chr8_1:59094041-59094060 None:intergenic 40.0%
! AAGAAGCATGCGACTAGATT+CGG + chr8_1:59094364-59094383 None:intergenic 40.0%
GAAGACCATCAAGAACAGAT+TGG - chr8_1:59094454-59094473 Msa1203880:intron 40.0%
TACCTCCAATCTGTTCTTGA+TGG + chr8_1:59094462-59094481 None:intergenic 40.0%
! TTGGAGGTATAGACCATACT+AGG - chr8_1:59094473-59094492 Msa1203880:intron 40.0%
AAAACCATGCTCTCCTAGTA+TGG + chr8_1:59094489-59094508 None:intergenic 40.0%
CCTAGGTTTACTAAGCGGTT+CGG - chr8_1:59088321-59088340 Msa1203880:three_prime_UTR 45.0%
!! ACGTCGGTTTAGCTATGAAC+CGG + chr8_1:59088355-59088374 None:intergenic 45.0%
!! CGAGAGATTTTGTTGTGTGC+AGG - chr8_1:59088643-59088662 Msa1203880:CDS 45.0%
AATGGAGCAACGAAAGCTTG+TGG - chr8_1:59088790-59088809 Msa1203880:intron 45.0%
CCATCAGTATCAACATCCCA+TGG + chr8_1:59088933-59088952 None:intergenic 45.0%
CCATGGGATGTTGATACTGA+TGG - chr8_1:59088930-59088949 Msa1203880:intron 45.0%
CAACTAAGCGTTATTGGGGT+CGG + chr8_1:59089089-59089108 None:intergenic 45.0%
!!! GGGAGTATTTTCTTCTTCGG+GGG - chr8_1:59089155-59089174 Msa1203880:intron 45.0%
CATATCCAAAACCGCGAGAT+CGG + chr8_1:59089546-59089565 None:intergenic 45.0%
CTATCCAGTGAACACAGTCT+TGG - chr8_1:59089694-59089713 Msa1203880:intron 45.0%
TTACCAGAATCTTTGTGGCC+AGG - chr8_1:59089902-59089921 Msa1203880:intron 45.0%
AATCCTGGCCACAAAGATTC+TGG + chr8_1:59089908-59089927 None:intergenic 45.0%
TGTTACTGAAGGAGCAATCC+TGG + chr8_1:59089923-59089942 None:intergenic 45.0%
CGTGGATCAAAAACACATCG+AGG - chr8_1:59090369-59090388 Msa1203880:intron 45.0%
!! GTACTTCTGAGTTCTGAGAC+AGG - chr8_1:59090583-59090602 Msa1203880:intron 45.0%
! ATTCCAGCCACAGTTTTCAC+TGG - chr8_1:59090668-59090687 Msa1203880:intron 45.0%
GAAAGAAACCCATGAACTGG+GGG - chr8_1:59091121-59091140 Msa1203880:intron 45.0%
AAAGAAACCCATGAACTGGG+GGG - chr8_1:59091122-59091141 Msa1203880:intron 45.0%
TAACTCATCGATAGACAGGC+CGG - chr8_1:59091412-59091431 Msa1203880:intron 45.0%
!! GACAGGCCGGGTTTTTAAAA+AGG - chr8_1:59091425-59091444 Msa1203880:intron 45.0%
CGAATTGGAGGGGAAAAAAG+TGG + chr8_1:59092062-59092081 None:intergenic 45.0%
AATATGCTGTCGACACACGT+TGG - chr8_1:59092347-59092366 Msa1203880:intron 45.0%
ACGCCGTATTGAGAACATCT+TGG + chr8_1:59092405-59092424 None:intergenic 45.0%
! GAAAACTGGTGGTGTGAAAC+GGG + chr8_1:59092479-59092498 None:intergenic 45.0%
! GCTGCATATCTAGTTGATGC+AGG + chr8_1:59092679-59092698 None:intergenic 45.0%
ATACAGGCGAAGATCTTCAG+TGG + chr8_1:59092894-59092913 None:intergenic 45.0%
! ATCTAGGATGTCAAGAGACC+TGG - chr8_1:59093024-59093043 Msa1203880:intron 45.0%
! AGACCTGGTCATAGAGGTTT+TGG - chr8_1:59093039-59093058 Msa1203880:intron 45.0%
! TTTGTGACTTTTGCGGACAG+TGG - chr8_1:59093063-59093082 Msa1203880:intron 45.0%
CGAAGACCTCATGAGATTTG+TGG - chr8_1:59093105-59093124 Msa1203880:intron 45.0%
TCGTGTCCACAAATCTCATG+AGG + chr8_1:59093114-59093133 None:intergenic 45.0%
TCATGAGATTTGTGGACACG+AGG - chr8_1:59093113-59093132 Msa1203880:intron 45.0%
! GGACACGAGGTACTTTGATT+TGG - chr8_1:59093126-59093145 Msa1203880:intron 45.0%
ATCACTGCAAGCAGTAAGGA+GGG + chr8_1:59093258-59093277 None:intergenic 45.0%
GTAGATCACTGCAAGCAGTA+AGG + chr8_1:59093262-59093281 None:intergenic 45.0%
TTTGTGAATCATGCTCCTGC+AGG - chr8_1:59093542-59093561 Msa1203880:CDS 45.0%
GATTCTTTCAGGGGATATGG+TGG - chr8_1:59093633-59093652 Msa1203880:intron 45.0%
! AAAGTCCTGTGAGGCCTTAT+GGG - chr8_1:59093679-59093698 Msa1203880:intron 45.0%
TACTCACATCATCGAAGTCC+AGG + chr8_1:59093719-59093738 None:intergenic 45.0%
! TCCGTTTTGCTAACAGAAGC+AGG - chr8_1:59094037-59094056 Msa1203880:intron 45.0%
CACTTGCAAGATGAGTACGA+TGG + chr8_1:59094234-59094253 None:intergenic 45.0%
! AGAAGCATGCGACTAGATTC+GGG + chr8_1:59094363-59094382 None:intergenic 45.0%
GACCATCAAGAACAGATTGG+AGG - chr8_1:59094457-59094476 Msa1203880:intron 45.0%
TAGACCATACTAGGAGAGCA+TGG - chr8_1:59094482-59094501 Msa1203880:intron 45.0%
!!! CTAGGAGAGCATGGTTTTGT+TGG - chr8_1:59094491-59094510 Msa1203880:intron 45.0%
!!! TATTTATTTTTCAATTTTTA+GGG - chr8_1:59088733-59088752 Msa1203880:intron 5.0%
!! TAAGTATTTAATATATAAAT+TGG - chr8_1:59089116-59089135 Msa1203880:intron 5.0%
!! AAGTATTTAATATATAAATT+GGG - chr8_1:59089117-59089136 Msa1203880:intron 5.0%
!!! AAAAAATTTAAAGTTAATTA+AGG - chr8_1:59091450-59091469 Msa1203880:intron 5.0%
CCGAACCGCTTAGTAAACCT+AGG + chr8_1:59088324-59088343 None:intergenic 50.0%
!! CGTCGGTTTAGCTATGAACC+GGG + chr8_1:59088354-59088373 None:intergenic 50.0%
GGTTCATAGCTAAACCGACG+TGG - chr8_1:59088354-59088373 Msa1203880:three_prime_UTR 50.0%
AGCGCGATTACCTGCGATTT+AGG - chr8_1:59088428-59088447 Msa1203880:three_prime_UTR 50.0%
GCGCGATTACCTGCGATTTA+GGG - chr8_1:59088429-59088448 Msa1203880:three_prime_UTR 50.0%
GGCTTCAGTTGCAACGGAAT+AGG + chr8_1:59089210-59089229 None:intergenic 50.0%
! CGTATCGGTGGATGATGCTA+AGG - chr8_1:59089573-59089592 Msa1203880:intron 50.0%
AGTCAAAGTGGCCACACCAA+AGG - chr8_1:59089732-59089751 Msa1203880:intron 50.0%
CACTTTCGCAACTGCAGGTT+TGG - chr8_1:59090404-59090423 Msa1203880:CDS 50.0%
TGGCCGTCACTATTTGTCTG+TGG - chr8_1:59090424-59090443 Msa1203880:CDS 50.0%
AGTCCAGTGAAAACTGTGGC+TGG + chr8_1:59090674-59090693 None:intergenic 50.0%
ATCAGAACCCCCCAGTTCAT+GGG + chr8_1:59091132-59091151 None:intergenic 50.0%
GGTTGATCGAGCAACACCTA+AGG - chr8_1:59091157-59091176 Msa1203880:intron 50.0%
AACTCATCGATAGACAGGCC+GGG - chr8_1:59091413-59091432 Msa1203880:intron 50.0%
!! GGTGTTCTGGTTCTGCCAAT+TGG + chr8_1:59092622-59092641 None:intergenic 50.0%
! TTTTTGCTTATCCCACGGGC+GGG + chr8_1:59092839-59092858 None:intergenic 50.0%
! CTTTTTGCTTATCCCACGGG+CGG + chr8_1:59092840-59092859 None:intergenic 50.0%
! TTTTGTTGGTCGTCTTCCCC+CGG - chr8_1:59092862-59092881 Msa1203880:intron 50.0%
AGATCTTCAGTGGTTGCCTC+CGG + chr8_1:59092884-59092903 None:intergenic 50.0%
GTCAAGAGACCTGGTCATAG+AGG - chr8_1:59093033-59093052 Msa1203880:intron 50.0%
TCACTGCAAGCAGTAAGGAG+GGG + chr8_1:59093257-59093276 None:intergenic 50.0%
GATCACTGCAAGCAGTAAGG+AGG + chr8_1:59093259-59093278 None:intergenic 50.0%
TGCGCTGTCAGGAATCATGT+AGG + chr8_1:59093346-59093365 None:intergenic 50.0%
CTGAATCTATGGCAACCTGC+AGG + chr8_1:59093560-59093579 None:intergenic 50.0%
! AAGAGGTGCGGCTGAATCTA+TGG + chr8_1:59093571-59093590 None:intergenic 50.0%
ACCTGCTTCATCAAGAGGTG+CGG + chr8_1:59093583-59093602 None:intergenic 50.0%
GAAAGTCCTGTGAGGCCTTA+TGG - chr8_1:59093678-59093697 Msa1203880:intron 50.0%
ATTCTCCCATAAGGCCTCAC+AGG + chr8_1:59093687-59093706 None:intergenic 50.0%
TGGGAGAATGTACGATAGCC+TGG - chr8_1:59093698-59093717 Msa1203880:intron 50.0%
GGCTAACAGGTTAGCAGACT+GGG + chr8_1:59094012-59094031 None:intergenic 50.0%
TGGCTAACAGGTTAGCAGAC+TGG + chr8_1:59094013-59094032 None:intergenic 50.0%
AAGACCTTCACAGCAGTTCC+TGG + chr8_1:59094547-59094566 None:intergenic 50.0%
!! AAGCGGTTCGGTTAAGCACC+CGG - chr8_1:59088333-59088352 Msa1203880:three_prime_UTR 55.0%
GTCGCCAAGACTGTGTTCAC+TGG + chr8_1:59089701-59089720 None:intergenic 55.0%
GTGAACACAGTCTTGGCGAC+AGG - chr8_1:59089701-59089720 Msa1203880:intron 55.0%
CAGGACGCTGGAAGTCAAAG+TGG - chr8_1:59089720-59089739 Msa1203880:intron 55.0%
CATCAGAACCCCCCAGTTCA+TGG + chr8_1:59091133-59091152 None:intergenic 55.0%
! TGAACTGGGGGGTTCTGATG+TGG - chr8_1:59091133-59091152 Msa1203880:intron 55.0%
ATACGGCGTCAACACACACC+CGG - chr8_1:59092416-59092435 Msa1203880:intron 55.0%
ATCTTCAGTGGTTGCCTCCG+GGG + chr8_1:59092882-59092901 None:intergenic 55.0%
GATCTTCAGTGGTTGCCTCC+GGG + chr8_1:59092883-59092902 None:intergenic 55.0%
ACTGCAAGCAGTAAGGAGGG+GGG + chr8_1:59093255-59093274 None:intergenic 55.0%
CACTGCAAGCAGTAAGGAGG+GGG + chr8_1:59093256-59093275 None:intergenic 55.0%
CTGGGACCTGCTTCATCAAG+AGG + chr8_1:59093588-59093607 None:intergenic 55.0%
CTTGATGAAGCAGGTCCCAG+CGG - chr8_1:59093588-59093607 Msa1203880:intron 55.0%
TTGATGAAGCAGGTCCCAGC+GGG - chr8_1:59093589-59093608 Msa1203880:intron 55.0%
CCTGGCACCCAAGTAGCATT+AGG + chr8_1:59094529-59094548 None:intergenic 55.0%
! CCTAATGCTACTTGGGTGCC+AGG - chr8_1:59094526-59094545 Msa1203880:intron 55.0%
! ACTGGCCGATCTCGCGGTTT+TGG - chr8_1:59089538-59089557 Msa1203880:CDS 60.0%
! ACTGGGGGGTTCTGATGTGG+TGG - chr8_1:59091136-59091155 Msa1203880:intron 60.0%
TCTTCAGTGGTTGCCTCCGG+GGG + chr8_1:59092881-59092900 None:intergenic 60.0%
GCCGCACCTCTTGATGAAGC+AGG - chr8_1:59093579-59093598 Msa1203880:CDS 60.0%
GGGGATATGGTGGTCCAGTG+AGG - chr8_1:59093643-59093662 Msa1203880:intron 60.0%
GGTGCCAGGAACTGCTGTGA+AGG - chr8_1:59094540-59094559 Msa1203880:intron 60.0%
GTGTGCAGGGAGCGAGTGTG+AGG - chr8_1:59088657-59088676 Msa1203880:CDS 65.0%
TGCAGGGAGCGAGTGTGAGG+AGG - chr8_1:59088660-59088679 Msa1203880:CDS 65.0%
AGGGAGCGAGTGTGAGGAGG+AGG - chr8_1:59088663-59088682 Msa1203880:CDS 65.0%
GGGAGCGAGTGTGAGGAGGA+GGG - chr8_1:59088664-59088683 Msa1203880:CDS 65.0%
CGGTCAACTGGCCGATCTCG+CGG - chr8_1:59089532-59089551 Msa1203880:CDS 65.0%
CAGTCTTGGCGACAGGACGC+TGG - chr8_1:59089708-59089727 Msa1203880:intron 65.0%
TTAGGAGGAGAACCCGCCCG+TGG - chr8_1:59092824-59092843 Msa1203880:intron 65.0%
TAGGAGGAGAACCCGCCCGT+GGG - chr8_1:59092825-59092844 Msa1203880:intron 65.0%
TGTTGGTCGTCTTCCCCCGG+AGG - chr8_1:59092865-59092884 Msa1203880:intron 65.0%
GCAAGCAGTAAGGAGGGGGG+AGG + chr8_1:59093252-59093271 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 59088292 59094835 59088292 ID=Msa1203880;Name=Msa1203880
chr8_1 mRNA 59088292 59094835 59088292 ID=Msa1203880-mRNA-1;Parent=Msa1203880;Name=Msa1203880-mRNA-1;_AED=0.16;_eAED=0.16;_QI=318|0.84|0.85|1|0.84|0.78|14|262|385
chr8_1 exon 59088292 59088695 59088292 ID=Msa1203880-mRNA-1:exon:19128;Parent=Msa1203880-mRNA-1
chr8_1 exon 59089421 59089563 59089421 ID=Msa1203880-mRNA-1:exon:19127;Parent=Msa1203880-mRNA-1
chr8_1 exon 59089993 59090097 59089993 ID=Msa1203880-mRNA-1:exon:19126;Parent=Msa1203880-mRNA-1
chr8_1 exon 59090172 59090299 59090172 ID=Msa1203880-mRNA-1:exon:19125;Parent=Msa1203880-mRNA-1
chr8_1 exon 59090382 59090523 59090382 ID=Msa1203880-mRNA-1:exon:19124;Parent=Msa1203880-mRNA-1
chr8_1 exon 59091949 59092025 59091949 ID=Msa1203880-mRNA-1:exon:19123;Parent=Msa1203880-mRNA-1
chr8_1 exon 59092707 59092761 59092707 ID=Msa1203880-mRNA-1:exon:19122;Parent=Msa1203880-mRNA-1
chr8_1 exon 59092975 59093020 59092975 ID=Msa1203880-mRNA-1:exon:19121;Parent=Msa1203880-mRNA-1
chr8_1 exon 59093168 59093253 59093168 ID=Msa1203880-mRNA-1:exon:19120;Parent=Msa1203880-mRNA-1
chr8_1 exon 59093374 59093439 59093374 ID=Msa1203880-mRNA-1:exon:19119;Parent=Msa1203880-mRNA-1
chr8_1 exon 59093533 59093598 59093533 ID=Msa1203880-mRNA-1:exon:19118;Parent=Msa1203880-mRNA-1
chr8_1 exon 59094129 59094209 59094129 ID=Msa1203880-mRNA-1:exon:19117;Parent=Msa1203880-mRNA-1
chr8_1 exon 59094316 59094462 59094316 ID=Msa1203880-mRNA-1:exon:19116;Parent=Msa1203880-mRNA-1
chr8_1 exon 59094644 59094835 59094644 ID=Msa1203880-mRNA-1:exon:19115;Parent=Msa1203880-mRNA-1
chr8_1 five_prime_UTR 59094644 59094835 59094644 ID=Msa1203880-mRNA-1:five_prime_utr;Parent=Msa1203880-mRNA-1
chr8_1 five_prime_UTR 59094337 59094462 59094337 ID=Msa1203880-mRNA-1:five_prime_utr;Parent=Msa1203880-mRNA-1
chr8_1 CDS 59094316 59094336 59094316 ID=Msa1203880-mRNA-1:cds;Parent=Msa1203880-mRNA-1
chr8_1 CDS 59094129 59094209 59094129 ID=Msa1203880-mRNA-1:cds;Parent=Msa1203880-mRNA-1
chr8_1 CDS 59093533 59093598 59093533 ID=Msa1203880-mRNA-1:cds;Parent=Msa1203880-mRNA-1
chr8_1 CDS 59093374 59093439 59093374 ID=Msa1203880-mRNA-1:cds;Parent=Msa1203880-mRNA-1
chr8_1 CDS 59093168 59093253 59093168 ID=Msa1203880-mRNA-1:cds;Parent=Msa1203880-mRNA-1
chr8_1 CDS 59092975 59093020 59092975 ID=Msa1203880-mRNA-1:cds;Parent=Msa1203880-mRNA-1
chr8_1 CDS 59092707 59092761 59092707 ID=Msa1203880-mRNA-1:cds;Parent=Msa1203880-mRNA-1
chr8_1 CDS 59091949 59092025 59091949 ID=Msa1203880-mRNA-1:cds;Parent=Msa1203880-mRNA-1
chr8_1 CDS 59090382 59090523 59090382 ID=Msa1203880-mRNA-1:cds;Parent=Msa1203880-mRNA-1
chr8_1 CDS 59090172 59090299 59090172 ID=Msa1203880-mRNA-1:cds;Parent=Msa1203880-mRNA-1
chr8_1 CDS 59089993 59090097 59089993 ID=Msa1203880-mRNA-1:cds;Parent=Msa1203880-mRNA-1
chr8_1 CDS 59089421 59089563 59089421 ID=Msa1203880-mRNA-1:cds;Parent=Msa1203880-mRNA-1
chr8_1 CDS 59088554 59088695 59088554 ID=Msa1203880-mRNA-1:cds;Parent=Msa1203880-mRNA-1
chr8_1 three_prime_UTR 59088292 59088553 59088292 ID=Msa1203880-mRNA-1:three_prime_utr;Parent=Msa1203880-mRNA-1
Gene Sequence

>Msa1203880

ATGGAGCAACGAAAGCTTGTGGTTTTGGGTATCCCATGGGATGTTGATACTGATGGGTTGAAAGAATATATGAGCAAATTTGGTGAGCTAGAAGATTGTATTGAACGGTCAACTGGCCGATCTCGCGGTTTTGGATATGTGACATTCGTATCGGTGGATGATGCTAAGAATGTGCTATCCAGTGAACACAGTCTTGGCGACAGGACGCTGGAAGTCAAAGTGGCCACACCAAAGGAGGAGATGAGGGCACCAGTCAAAAAGATTACCAGAATCTTTGTGGCCAGGATTGCTCCTTCAGTAACAGAAGAAACTTTTAGGAGTCATTTTGAGAAATACGGTGATATAACAGATTTATATATGCCAAAGGATCGTGGATCAAAAACACATCGAGGAATTGGTTTTATCACTTTCGCAACTGCAGATTCTGTGGAGAACTTGATGAAAGAAACCCATGAACTGGGGGGTTCTGATGTGGTGGTTGATCGAGCAACACCTAAGGAAGATGATTTCAAGCCAATTGGCAGAACCAGAACACCACAATTAGGATATAGTGCATATAGTACTTATATTCCTGCATCAACTAGATATGCAGCACTTGGCGCTCCAACTATGTATGATCGTCCAAGTTCTATTTATGGAAGAGGAGAACCCGCCCGTGGGATAAGCAAAAAGATTTTTGTTGGTCGTCTTCCCCCGGAGGCAACCACTGAAGATCTTCGCCTGTATTTTGGAAGATTTGGCCATATCTTAGATGTTTATATTCCTAGGGATGTCAAGAGACCTGGTCATAGAGGTTTTGGTTTTGTGACTTTTGCGGACAGTGGTGTTGCAGATCGTGTCTCTCGAAGACCTCATGAGATTTGTGGACACGAGGTTGCCATAGATTCAGCCGCACCTCTTGATGAAGCAGGTCCCAGCGGGAATACTATGTTGAATAGCATGGATTCTTTCAGGGGATATGGTGGTCCAGTGAGGCCTTATTTTGATGAAAGTCCTGTGAGGCCTTATGGGAGAATTTGGGTTATGGAGTTGCTAGCAGAAGACCATCAAGAACAGATTGGAGGTATAGACCATACTAGGAGAGCATGGTTTTGTTGGCCGCATTGTATTCCTAATGCTACTTGGGTGCCAGGAACTGCTGTGAAGGTCTTCTATTAA
Protein sequence

>Msa1203880

MEQRKLVVLGIPWDVDTDGLKEYMSKFGELEDCIERSTGRSRGFGYVTFVSVDDAKNVLSSEHSLGDRTLEVKVATPKEEMRAPVKKITRIFVARIAPSVTEETFRSHFEKYGDITDLYMPKDRGSKTHRGIGFITFATADSVENLMKETHELGGSDVVVDRATPKEDDFKPIGRTRTPQLGYSAYSTYIPASTRYAALGAPTMYDRPSSIYGRGEPARGISKKIFVGRLPPEATTEDLRLYFGRFGHILDVYIPRDVKRPGHRGFGFVTFADSGVADRVSRRPHEICGHEVAIDSAAPLDEAGPSGNTMLNSMDSFRGYGGPVRPYFDESPVRPYGRIWVMELLAEDHQEQIGGIDHTRRAWFCWPHCIPNATWVPGTAVKVFY*