AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0038440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0038440 MtrunA17_Chr1g0202021 93.912 1347 22 5 1 1293 1 1341 0.0 2009
Msa0038440 MtrunA17_Chr1g0201991 88.647 643 73 0 651 1293 184 826 0.0 1193
Msa0038440 MtrunA17_Chr4g0000221 67.097 465 116 9 665 1123 2 435 0.0 589
Msa0038440 MtrunA17_Chr4g0000991 62.850 428 108 6 632 1058 19 396 3.78e-170 511
Msa0038440 MtrunA17_Chr7g0264901 58.580 338 135 2 691 1027 25 358 7.35e-124 389
Msa0038440 MtrunA17_Chr4g0004141 62.257 257 58 5 1015 1264 216 440 5.54e-86 287
Msa0038440 MtrunA17_Chr4g0004141 53.304 227 72 5 702 925 13 208 4.28e-68 236
Msa0038440 MtrunA17_Chr7g0264471 47.143 280 137 3 698 975 51 321 1.53e-77 260
Msa0038440 MtrunA17_Chr7g0263861 72.180 133 34 1 1060 1192 144 273 2.80e-56 196
Msa0038440 MtrunA17_Chr2g0312621 27.000 500 253 17 702 1162 495 921 8.47e-27 119
Msa0038440 MtrunA17_Chr5g0412261 25.893 560 311 20 702 1233 200 683 2.27e-20 97.4
Msa0038440 MtrunA17_Chr4g0038951 77.778 54 6 1 933 986 33 80 8.10e-19 82.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0038440 AT1G76810.1 66.023 1192 334 23 142 1293 134 1294 0.0 1212
Msa0038440 AT1G76720.2 60.214 1307 386 36 1 1271 11 1219 0.0 1144
Msa0038440 AT1G76720.1 59.877 1306 369 35 1 1271 1 1186 0.0 1138
Msa0038440 AT1G21160.1 58.624 1032 363 19 293 1293 94 1092 0.0 1019
Msa0038440 AT2G27700.1 70.722 485 130 5 662 1145 5 478 0.0 688
Msa0038440 AT2G27700.2 70.576 486 130 6 662 1145 5 479 0.0 683
Msa0038440 AT1G17220.1 27.122 483 245 18 702 1150 500 909 2.43e-26 117
Msa0038440 AT4G11160.3 38.346 133 60 2 702 830 218 332 4.90e-21 99.8
Msa0038440 AT4G11160.1 23.446 563 323 16 702 1231 216 703 1.80e-19 95.1
Msa0038440 AT4G11160.2 23.446 563 323 16 702 1231 218 705 3.21e-19 94.4

Find 363 sgRNAs with CRISPR-Local

Find 657 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGTACGAAATTTGTGTAAA+AGG 0.120489 1_1:-67920482 None:intergenic
TCATCTATTTGATCAATTTA+AGG 0.120606 1_1:+67926124 Msa0038440:CDS
GAATTCACTAAAAGTAATTT+AGG 0.146710 1_1:+67928617 Msa0038440:three_prime_UTR
GAAAACCCTAATCTCATAAA+TGG 0.164657 1_1:+67920523 Msa0038440:exon
AATTCAAGCACATACCTTAA+TGG 0.180909 1_1:-67926814 None:intergenic
TCGCATAATCAACCGGTTTA+TGG 0.181960 1_1:-67926773 None:intergenic
TTGCAGGTTGACAGGCTTTA+TGG 0.183037 1_1:+67923810 Msa0038440:intron
CCTTTCTTTGTCTGATAAAT+AGG 0.186529 1_1:-67922153 None:intergenic
GTGTTCCATGCTTTGCATTT+TGG 0.208952 1_1:+67928417 Msa0038440:three_prime_UTR
TCTATGTGATATTGCAATTT+TGG 0.214686 1_1:+67923613 Msa0038440:CDS
GCTTCTCGGTCATGGTCTTT+TGG 0.220651 1_1:-67924820 None:intergenic
TGGCTCATTGGAAGCATTAT+TGG 0.222532 1_1:+67925893 Msa0038440:CDS
CAAGAAGGATCCGATTGTTT+TGG 0.225158 1_1:+67926244 Msa0038440:CDS
TTCTTGTTGAAGACACAATT+TGG 0.236922 1_1:-67926227 None:intergenic
GAACCGGTTGTTAGCTTTAC+AGG 0.257455 1_1:+67920977 Msa0038440:CDS
GTATAGTAAATCACAAAATT+TGG 0.265554 1_1:-67928252 None:intergenic
GGTGGAAGTGTGTTTGCTTC+TGG 0.266460 1_1:+67920866 Msa0038440:CDS
CACTTTCTTGTCAGCCGCTT+TGG 0.268956 1_1:-67921803 None:intergenic
GGTTCTGCCCCTGGTGCTTC+AGG 0.278743 1_1:+67921604 Msa0038440:CDS
TTCTCGTCGTCGCGGATTGC+TGG 0.281368 1_1:-67920557 None:intergenic
ATCCTTGACAGTTACCCTTT+TGG 0.285951 1_1:-67928223 None:intergenic
CTTCCCCATTTATGAGATTA+GGG 0.297082 1_1:-67920528 None:intergenic
AGAAAGTGCCAAAGCATGTT+AGG 0.301941 1_1:+67921818 Msa0038440:CDS
TTTAGTGAATTCAAACTATC+AGG 0.303132 1_1:-67928606 None:intergenic
AAGGCAGCGGCAGCAGCAGC+TGG 0.303633 1_1:+67921709 Msa0038440:CDS
CAATAGATCTCCGTGAAATA+TGG 0.308897 1_1:-67927231 None:intergenic
CATAGGTATGCATGCTTGTT+TGG 0.310986 1_1:+67928453 Msa0038440:three_prime_UTR
TCTTCCCCATTTATGAGATT+AGG 0.311680 1_1:-67920529 None:intergenic
TGATTTGGAATATATTAAAA+AGG 0.312978 1_1:+67925791 Msa0038440:CDS
ATTCATTGTTGCATTGAATA+AGG 0.320644 1_1:+67923709 Msa0038440:CDS
CCCTTTCTTCGAACCCTTCG+AGG 0.321277 1_1:-67921011 None:intergenic
AACTTGAGGTCTCGGGGTTC+AGG 0.322803 1_1:+67923590 Msa0038440:CDS
AGGGCAGAAAGTAGCCATTA+AGG 0.323078 1_1:+67926800 Msa0038440:CDS
GTGAGTGATGAAATCGAGTT+TGG 0.323250 1_1:+67921334 Msa0038440:CDS
TCTTGGGAAGGGATACAAAT+TGG 0.327465 1_1:-67926711 None:intergenic
GGCTTACATGGACAACATTA+AGG 0.327960 1_1:+67926145 Msa0038440:CDS
TCCCAAGAGTTCATTGATAT+TGG 0.331197 1_1:+67926726 Msa0038440:CDS
TGCATCAGCTTTCAGTTCCT+TGG 0.331642 1_1:-67923510 None:intergenic
GCAGCAGGTTGTGCTGTAGC+AGG 0.333529 1_1:-67921535 None:intergenic
TAGGGATCTTGCAGAAGAAT+TGG 0.335361 1_1:+67926070 Msa0038440:CDS
CGTACGAAATTTGTGTAAAA+GGG 0.335560 1_1:-67920481 None:intergenic
AGTGTGTTTGCTTCTGGATT+TGG 0.335749 1_1:+67920872 Msa0038440:CDS
TCTTCTACAGCTTCAATTAC+CGG 0.335849 1_1:-67921739 None:intergenic
TCTGCAAGATCCCTAGCTTC+AGG 0.339277 1_1:-67926062 None:intergenic
AATTCACTAAAAGTAATTTA+GGG 0.339278 1_1:+67928618 Msa0038440:three_prime_UTR
TGCATCTCCCTAACATGCTT+TGG 0.339681 1_1:-67921826 None:intergenic
AGTTGCTTTGCTTTGCCTCT+AGG 0.342079 1_1:-67920287 None:intergenic
CTAGATTGTCACTCAGTTCA+AGG 0.343186 1_1:+67924011 Msa0038440:intron
TCAGCTGCAGGCTTCGTAAC+AGG 0.343911 1_1:-67923224 None:intergenic
TTCCCTTCACTCGGCTTAGA+AGG 0.346826 1_1:-67923326 None:intergenic
GGCATCTACCCTTGGCTCAT+TGG 0.352679 1_1:+67925881 Msa0038440:CDS
CTCCTGCAGCTTGGATCCTC+TGG 0.358186 1_1:+67928200 Msa0038440:three_prime_UTR
GGGGATCAAATAGTTGTATC+TGG 0.361083 1_1:+67925043 Msa0038440:CDS
TTCATTGAGTAAAGCTATTC+CGG 0.362489 1_1:+67921180 Msa0038440:CDS
TGACCCATGATGCAGCAAAT+TGG 0.364112 1_1:-67923359 None:intergenic
TTAACACGAAGTTCCTTCAT+TGG 0.364194 1_1:-67925189 None:intergenic
GGGCTTGAACATGCTATTGC+TGG 0.370042 1_1:+67925738 Msa0038440:CDS
CGGTTTATGGTTATTCTCAA+TGG 0.370182 1_1:-67926760 None:intergenic
GAAAGAAGAAGCCCGGCGTT+TGG 0.370964 1_1:+67922050 Msa0038440:CDS
CGGTATAATGCCGGACTTTG+AGG 0.371562 1_1:+67928077 Msa0038440:three_prime_UTR
GCTTCTGGATTTGGTGTGCT+TGG 0.371860 1_1:+67920881 Msa0038440:CDS
ATATTCTCAAAACTAATTAT+CGG 0.374973 1_1:+67927254 Msa0038440:CDS
TTCGCTGTATGTAAGCTTCT+CGG 0.376770 1_1:-67924834 None:intergenic
AAAACCCTAATCTCATAAAT+GGG 0.380417 1_1:+67920524 Msa0038440:exon
ATACCTTTAAAATGCCTTCA+AGG 0.381890 1_1:-67926277 None:intergenic
AGTTACCTTATTGCACTTGT+AGG 0.383336 1_1:-67924099 None:intergenic
CACTGGCAAAACCAAGCTTC+TGG 0.384093 1_1:+67923388 Msa0038440:CDS
CAACTTCGTTTGCAGATTGT+TGG 0.386207 1_1:+67927142 Msa0038440:intron
TGGCTACCAGTGTACCGTTT+TGG 0.388026 1_1:+67924952 Msa0038440:intron
ACGAGAGTATGCTACTATAT+TGG 0.389206 1_1:+67926019 Msa0038440:CDS
ATGATGTCAATCTGAATGAT+AGG 0.389984 1_1:+67922388 Msa0038440:CDS
CAGGAAGGTAAATTGTTAAC+TGG 0.390014 1_1:+67922021 Msa0038440:CDS
GTTGCTTTGCTTTGCCTCTA+GGG 0.391688 1_1:-67920286 None:intergenic
GACCAATATCAATGAACTCT+TGG 0.397471 1_1:-67926728 None:intergenic
GCTCGAATTGTGGTAACAAT+TGG 0.397760 1_1:-67925150 None:intergenic
GGTTTCTCTTCCACCGCAAC+CGG 0.398483 1_1:-67920683 None:intergenic
CCACCGCCTTGTTGCGGCGG+AGG 0.398804 1_1:-67920581 None:intergenic
CTAACAGGAATATTCACTTC+TGG 0.399897 1_1:-67925930 None:intergenic
GTCGCCAATTTGCTGCATCA+TGG 0.404818 1_1:+67923355 Msa0038440:CDS
CCTATGTTTATAGCACTAAC+AGG 0.407601 1_1:-67925945 None:intergenic
CTGCAAGATCCCTAGCTTCA+GGG 0.408159 1_1:-67926061 None:intergenic
ATAACATCCTTCTTGTGTAC+AGG 0.409198 1_1:-67925969 None:intergenic
ACTAATAGTAATAACATATC+CGG 0.410722 1_1:-67924788 None:intergenic
TTCTTACCCGAGAAAGTGAT+TGG 0.411659 1_1:-67921121 None:intergenic
TCTTCAGTTTCTTCAGCTGC+AGG 0.413951 1_1:-67923236 None:intergenic
TTATTGAATGACTCGTGTCC+TGG 0.414476 1_1:-67923569 None:intergenic
GAAGAACAGCAGAAAATGTT+CGG 0.414887 1_1:+67927175 Msa0038440:CDS
TAATGATGATGAAGAGAAAT+CGG 0.414892 1_1:+67920922 Msa0038440:CDS
CCTATTTATCAGACAAAGAA+AGG 0.419360 1_1:+67922153 Msa0038440:CDS
GTTCAGCCGGTTCCTGTAGT+AGG 0.420123 1_1:+67921583 Msa0038440:CDS
ATATATTCCAAATCATCATC+AGG 0.422912 1_1:-67925783 None:intergenic
GGTAAAGCCTGATGATGATT+TGG 0.424032 1_1:+67925776 Msa0038440:CDS
TTGAGTGACTCTATAGTTTG+TGG 0.428244 1_1:-67923662 None:intergenic
CCTTTCTTCGCATAATCAAC+CGG 0.430053 1_1:-67926780 None:intergenic
CATTCAATAACTTGAGGTCT+CGG 0.430364 1_1:+67923582 Msa0038440:CDS
GAACACCAAATGTATACAAA+TGG 0.432746 1_1:-67928400 None:intergenic
CTCGATTTCATCACTCACTT+TGG 0.433153 1_1:-67921329 None:intergenic
CAGCAGGTTGTGCTGTAGCA+GGG 0.434057 1_1:-67921534 None:intergenic
TTGTGCCTACAAGTGCAATA+AGG 0.435172 1_1:+67924094 Msa0038440:CDS
TCCTCATTGCCTCCAAACGC+CGG 0.435876 1_1:-67922062 None:intergenic
AGCAATGACACAGCAGTCTA+AGG 0.435929 1_1:+67923866 Msa0038440:CDS
ATGATGATGTTGAGGATGAA+TGG 0.437230 1_1:+67922349 Msa0038440:CDS
ACTACTTCTTCAACAACTTC+AGG 0.437617 1_1:-67922318 None:intergenic
AAGCTTCTGGATTGCATTCG+AGG 0.438347 1_1:+67923401 Msa0038440:CDS
GCTTGGATCCTCTGGCCAAA+AGG 0.439197 1_1:+67928208 Msa0038440:three_prime_UTR
CAGCTTTGATTTCTTTGTGA+TGG 0.440327 1_1:-67925572 None:intergenic
TATTCTCAAAACTAATTATC+GGG 0.440804 1_1:+67927255 Msa0038440:CDS
TGGTGAGGGCGTTTGTGTCC+AGG 0.441481 1_1:+67925860 Msa0038440:CDS
CCCTGGTGCTTCAGGAGAAA+AGG 0.442140 1_1:+67921612 Msa0038440:CDS
ACTCTTCCTGGCGCGGACAC+TGG 0.442324 1_1:+67922114 Msa0038440:CDS
AGGACAGAAATTGTCATCAT+TGG 0.442816 1_1:-67928586 None:intergenic
AATGAAGGAACTTCGTGTTA+AGG 0.444264 1_1:+67925191 Msa0038440:CDS
ACAACGAATCGAAATCATAA+TGG 0.444429 1_1:+67922180 Msa0038440:CDS
TTTATCCTCAACCACAACTT+TGG 0.444603 1_1:-67923270 None:intergenic
TGCTGAGGAGGAGCCGCAGC+AGG 0.448228 1_1:-67921550 None:intergenic
GTTAATGGTGTTCTTCATGA+AGG 0.449872 1_1:+67925022 Msa0038440:CDS
ATTCAATAACTTGAGGTCTC+GGG 0.449916 1_1:+67923583 Msa0038440:CDS
TGTGTCATTGCTTTACGAAT+TGG 0.449988 1_1:-67923855 None:intergenic
AGGAAGAGGAAGAGAAGCAA+AGG 0.451717 1_1:+67921893 Msa0038440:CDS
AGATTCAGAGGAACCTGAAA+AGG 0.452639 1_1:+67922260 Msa0038440:CDS
GGTGTCAGAGGATGCGGCTC+CGG 0.452789 1_1:+67920664 Msa0038440:CDS
TGCTTTGTGCGGCGGTGAAA+AGG 0.453233 1_1:-67920394 None:intergenic
GATGCAACACTGAAAGTTCC+CGG 0.455894 1_1:+67923527 Msa0038440:CDS
TGCTGCGGCTCCTCCTCAGC+AGG 0.455982 1_1:+67921552 Msa0038440:CDS
CTTTCACGTATGTTCTCAGC+AGG 0.456275 1_1:-67923485 None:intergenic
AGAGGATGCGGCTCCGGTTG+CGG 0.458787 1_1:+67920670 Msa0038440:CDS
TCGCAACATTGCAGGTTGAC+AGG 0.458948 1_1:+67923802 Msa0038440:intron
TGATGAACCAATCACTTTCT+CGG 0.459759 1_1:+67921114 Msa0038440:CDS
GACATAGGATGATCTGACTA+TGG 0.460108 1_1:+67927937 Msa0038440:intron
CCTCGAAGGGTTCGAAGAAA+GGG 0.460536 1_1:+67921011 Msa0038440:CDS
CAAAGAAATCAAAGCTGCTA+TGG 0.462455 1_1:+67925578 Msa0038440:CDS
TTGGAAGTCAAGGTTATTGA+AGG 0.462841 1_1:+67924971 Msa0038440:CDS
TGATCAATTTAAGGCTTACA+TGG 0.463950 1_1:+67926133 Msa0038440:CDS
AACTTGTAAGCCATATTTCA+CGG 0.465418 1_1:+67927221 Msa0038440:CDS
TTGGGAGTTGATATCCTTGA+AGG 0.466103 1_1:+67926263 Msa0038440:CDS
TTCCCTGTAAAGCTAACAAC+CGG 0.468099 1_1:-67920980 None:intergenic
GATAGAGGAACTTGAGAGAC+AGG 0.468572 1_1:+67921939 Msa0038440:CDS
AAGAACAGCAGAAAATGTTC+GGG 0.470152 1_1:+67927176 Msa0038440:CDS
AGAAACTGAAGATAGAAAAC+AGG 0.470475 1_1:+67923247 Msa0038440:CDS
GATGCAATGATGCAGATAGA+AGG 0.470608 1_1:+67928135 Msa0038440:three_prime_UTR
GGTATAATGCCGGACTTTGA+GGG 0.472480 1_1:+67928078 Msa0038440:three_prime_UTR
CGGTCTTGAGCAGGATTGAC+AGG 0.472577 1_1:+67925835 Msa0038440:CDS
TTTCAATGTAACAGCGAAAG+AGG 0.476022 1_1:-67920434 None:intergenic
GATGAACCAATCACTTTCTC+GGG 0.476483 1_1:+67921115 Msa0038440:CDS
TCCTCGAAGGGTTCGAAGAA+AGG 0.476498 1_1:+67921010 Msa0038440:CDS
GAAGAGAAATCGGAGGTAAC+CGG 0.477907 1_1:+67920932 Msa0038440:CDS
GGTCCACCAGTGTCCGCGCC+AGG 0.479029 1_1:-67922120 None:intergenic
AATGTTCAAGAAGGTGAGGC+TGG 0.479918 1_1:+67923428 Msa0038440:CDS
TATTCATCGTCATCGATAAC+CGG 0.480313 1_1:-67920623 None:intergenic
ACCAATATCAATGAACTCTT+GGG 0.480786 1_1:-67926727 None:intergenic
TGTGTCCAGGCATCTACCCT+TGG 0.481656 1_1:+67925873 Msa0038440:CDS
ACTGAAAGTTCCCGGTCTAC+TGG 0.483185 1_1:+67923535 Msa0038440:CDS
CCTCATTGCCTCCAAACGCC+GGG 0.486379 1_1:-67922061 None:intergenic
AGGGATCTTGCAGAAGAATT+GGG 0.486944 1_1:+67926071 Msa0038440:CDS
TCGCCAATTTGCTGCATCAT+GGG 0.487968 1_1:+67923356 Msa0038440:CDS
GATAAGCTTCTCGCAGAGCT+TGG 0.489009 1_1:+67921505 Msa0038440:CDS
AGCCTCACCTTCTTGAACAT+TGG 0.489331 1_1:-67923426 None:intergenic
TGAGAATGATGATGGAGAAG+AGG 0.490930 1_1:+67921060 Msa0038440:CDS
TGATGATGTTGAGGATGAAT+GGG 0.491154 1_1:+67922350 Msa0038440:CDS
AGAGGAGCGACGAAGGATAG+AGG 0.492105 1_1:+67921924 Msa0038440:CDS
TCAAAGTCACCCCTGAAGCT+AGG 0.492751 1_1:+67926051 Msa0038440:CDS
CCGGTTGATTATGCGAAGAA+AGG 0.495046 1_1:+67926780 Msa0038440:CDS
TAGGGAGATGCAAGAACTAC+TGG 0.496180 1_1:+67921837 Msa0038440:CDS
AGAGGAGAGTAAGAATGAAA+AGG 0.496191 1_1:+67921078 Msa0038440:CDS
AAAGAAAGAATCTGCGGATG+AGG 0.496199 1_1:+67926175 Msa0038440:CDS
AATAACCTTGACTTCCAAAA+CGG 0.496574 1_1:-67924966 None:intergenic
CATTGAGAATAACCATAAAC+CGG 0.497395 1_1:+67926761 Msa0038440:CDS
GTATGTAAGCTTCTCGGTCA+TGG 0.499658 1_1:-67924828 None:intergenic
CTTGGATCCTCTGGCCAAAA+GGG 0.500718 1_1:+67928209 Msa0038440:three_prime_UTR
CCTGTAGTAGGTTCTGCCCC+TGG 0.500848 1_1:+67921595 Msa0038440:CDS
CGATGACGATGAGGATGAAC+CGG 0.501281 1_1:+67920961 Msa0038440:CDS
ATTTAATATTTCAGTGGTGA+AGG 0.501321 1_1:+67924761 Msa0038440:intron
TTCAGAATGAGTTCAATATG+AGG 0.501847 1_1:+67923892 Msa0038440:CDS
GTCATCAAAGGGTTCGAAGA+AGG 0.501993 1_1:+67921150 Msa0038440:CDS
AAAAGAATAAGAAGAAGAGT+GGG 0.502262 1_1:+67921455 Msa0038440:CDS
TATTGAATGACTCGTGTCCT+GGG 0.502284 1_1:-67923568 None:intergenic
AATAGTTGTATCTGGAATGC+AGG 0.504285 1_1:+67925051 Msa0038440:CDS
CGGTTGATTATGCGAAGAAA+GGG 0.505603 1_1:+67926781 Msa0038440:CDS
AGGCAGATTCTCAATAGCAC+AGG 0.506514 1_1:+67922084 Msa0038440:CDS
ATTGGACGATTTCTGTTCAA+AGG 0.509473 1_1:-67928568 None:intergenic
CGAAGTTCCTTCATTGGATG+AGG 0.509629 1_1:-67925183 None:intergenic
CCTCCGCCGCAACAAGGCGG+TGG 0.509665 1_1:+67920581 Msa0038440:CDS
AGAGGCTAAACGTAGAAAGA+AGG 0.510786 1_1:+67921966 Msa0038440:CDS
GACCGAAGGTTCCCTTCACT+CGG 0.511610 1_1:-67923335 None:intergenic
ATGAGCCAAGGGTAGATGCC+TGG 0.511848 1_1:-67925878 None:intergenic
ATACACATCTGTGGTATACA+TGG 0.512971 1_1:+67928271 Msa0038440:three_prime_UTR
GGTTGAAGAAGTGGAGATGG+AGG 0.513489 1_1:+67922281 Msa0038440:CDS
ACGTGGAGTCGGTCTTGAGC+AGG 0.513755 1_1:+67925826 Msa0038440:CDS
ATATCAACTCCCAAAACAAT+CGG 0.514889 1_1:-67926254 None:intergenic
GGCCAGAGGATCCAAGCTGC+AGG 0.515164 1_1:-67928202 None:intergenic
AGCCGAGTGAAGGGAACCTT+CGG 0.515404 1_1:+67923333 Msa0038440:CDS
GCAGAACCTACTACAGGAAC+CGG 0.517619 1_1:-67921589 None:intergenic
ACTTCTATGCTCCTGCAGCT+TGG 0.517762 1_1:+67928191 Msa0038440:three_prime_UTR
AAAGGTTGAAGAAGTGGAGA+TGG 0.518426 1_1:+67922278 Msa0038440:CDS
CGTCTGTGTAGTGTGAGAGC+TGG 0.518847 1_1:+67928536 Msa0038440:three_prime_UTR
CTTCCTGGCGCGGACACTGG+TGG 0.519626 1_1:+67922117 Msa0038440:CDS
TGCTGGAGCTAGTTTATATG+TGG 0.519781 1_1:+67925755 Msa0038440:CDS
GGAGGAGGTGTCAGAGGATG+CGG 0.521052 1_1:+67920658 Msa0038440:CDS
ACGAAAATTGCTTTGTGCGG+CGG 0.521104 1_1:-67920402 None:intergenic
GTCACTCAGTTCAAGGAACA+AGG 0.521657 1_1:+67924018 Msa0038440:CDS
CCTGTTAGTGCTATAAACAT+AGG 0.522577 1_1:+67925945 Msa0038440:CDS
ATTGACACCTCATCCAATGA+AGG 0.523422 1_1:+67925176 Msa0038440:CDS
AGCAGCAGCTGGAAGTGCAC+CGG 0.523466 1_1:+67921720 Msa0038440:CDS
AGAGGCAAAGCAAAGCAACT+TGG 0.524605 1_1:+67920290 Msa0038440:five_prime_UTR
ATGTTCAAGAAGGTGAGGCT+GGG 0.524700 1_1:+67923429 Msa0038440:CDS
TGGGAGGACTAAAGAAGAGG+AGG 0.525672 1_1:+67921474 Msa0038440:CDS
TACATACAGCGAAGAAGTGC+AGG 0.526176 1_1:+67924844 Msa0038440:CDS
AGAATAAGAAGAAGAGTGGG+AGG 0.527306 1_1:+67921458 Msa0038440:CDS
CAAAGTCACCCCTGAAGCTA+GGG 0.528771 1_1:+67926052 Msa0038440:CDS
AGGTTGACAGGCTTTATGGC+TGG 0.530442 1_1:+67923814 Msa0038440:intron
TCGAATGCAATCCAGAAGCT+TGG 0.530972 1_1:-67923399 None:intergenic
TTTCCACCGCCTTGTTGCGG+CGG 0.531546 1_1:-67920584 None:intergenic
GAAAGTGCCAAAGCATGTTA+GGG 0.533187 1_1:+67921819 Msa0038440:CDS
TTAATGGTGTTCTTCATGAA+GGG 0.534561 1_1:+67925023 Msa0038440:CDS
GACTATGGAGGAATGGAAGC+TGG 0.535656 1_1:+67927952 Msa0038440:CDS
ACCTGAAAAGGTTGAAGAAG+TGG 0.535666 1_1:+67922272 Msa0038440:CDS
AGGGTAACTGTCAAGGATGA+AGG 0.537044 1_1:+67928228 Msa0038440:three_prime_UTR
TGAGAGAAAGCAAATATTCA+CGG 0.537618 1_1:+67928327 Msa0038440:three_prime_UTR
GTCAAGGTTATTGAAGGCCA+TGG 0.537843 1_1:+67924977 Msa0038440:CDS
GTACGTTGCACCAATCTGTT+GGG 0.541158 1_1:-67923459 None:intergenic
AAAGAAATCAAAGCTGCTAT+GGG 0.542406 1_1:+67925579 Msa0038440:CDS
GAAGCAAAGGAAAGAAGAAG+AGG 0.544089 1_1:+67921906 Msa0038440:CDS
GGGAATCAAGATCACTGCCC+AGG 0.545100 1_1:+67925599 Msa0038440:CDS
TGAGTGATGAAATCGAGTTT+GGG 0.545205 1_1:+67921335 Msa0038440:CDS
TCTGTATCTGAGTCTGCTAA+AGG 0.545690 1_1:+67921217 Msa0038440:CDS
AGTACGTTGCACCAATCTGT+TGG 0.546668 1_1:-67923460 None:intergenic
GTACGAAATTTGTGTAAAAG+GGG 0.548442 1_1:-67920480 None:intergenic
GAGTGGGAGGACTAAAGAAG+AGG 0.548679 1_1:+67921471 Msa0038440:CDS
TTTGACAATTGGTTCAGGCT+CGG 0.549296 1_1:-67922439 None:intergenic
CTCATCGTCATCGCCCTCAC+CGG 0.549764 1_1:-67920951 None:intergenic
AAATCGGAGGTAACCGGTGA+GGG 0.551033 1_1:+67920938 Msa0038440:CDS
AGCAGGTTGTGCTGTAGCAG+GGG 0.552590 1_1:-67921533 None:intergenic
GGTATCAATAACCAGTAGAC+CGG 0.552679 1_1:-67923546 None:intergenic
ATGATCTGACTATGGAGGAA+TGG 0.553038 1_1:+67927945 Msa0038440:CDS
AGAAGAAGCCCGGCGTTTGG+AGG 0.555273 1_1:+67922053 Msa0038440:CDS
CTAATAGTAATAACATATCC+GGG 0.555274 1_1:-67924787 None:intergenic
GAGTAAAGCTATTCCGGAGG+AGG 0.555869 1_1:+67921186 Msa0038440:CDS
CGGTGGAAAATCAAAGAAGA+AGG 0.555949 1_1:+67920598 Msa0038440:CDS
CAACATCAATAGTAGTTCCA+TGG 0.556648 1_1:-67924994 None:intergenic
GCATTAGATGAGAATGATGA+TGG 0.559178 1_1:+67921052 Msa0038440:CDS
TGTTCAAGAAGGTGAGGCTG+GGG 0.559825 1_1:+67923430 Msa0038440:CDS
TGTTATTACTATTAGTTCAG+TGG 0.560033 1_1:+67924795 Msa0038440:CDS
CATAGGCCCTGTACACAAGA+AGG 0.561171 1_1:+67925962 Msa0038440:CDS
TTTCAGTGGTGAAGGAATCC+CGG 0.561971 1_1:+67924769 Msa0038440:intron
TGCTTTCTCTCATCGAACAA+AGG 0.562604 1_1:-67928316 None:intergenic
CAAAACCAAAATGCAAAGCA+TGG 0.562929 1_1:-67928422 None:intergenic
GAAGGCACGGCAGACAGTTG+TGG 0.563477 1_1:-67923308 None:intergenic
ACAGAAACACTATCCTCCTC+CGG 0.563721 1_1:-67921199 None:intergenic
TGAAATGTTCGGTATAATGC+CGG 0.564900 1_1:+67928068 Msa0038440:three_prime_UTR
TCAAAGGGTTCGAAGAAGGC+AGG 0.566364 1_1:+67921154 Msa0038440:CDS
ACTACTGGCTAGAAGAAAAG+AGG 0.566570 1_1:+67921852 Msa0038440:CDS
AAGAAGAAGAGGAGCGACGA+AGG 0.568334 1_1:+67921917 Msa0038440:CDS
ACAGGCCAAAGTTGTGGTTG+AGG 0.569051 1_1:+67923265 Msa0038440:CDS
TGATGTCAATCTGAATGATA+GGG 0.569686 1_1:+67922389 Msa0038440:CDS
GTAAGCAGAAAGAAGAAGCC+CGG 0.569714 1_1:+67922043 Msa0038440:CDS
GGCCAAAAGGGTAACTGTCA+AGG 0.571498 1_1:+67928221 Msa0038440:three_prime_UTR
GGTAAGATCTTCAGAACACA+TGG 0.572020 1_1:-67926206 None:intergenic
CGGAGTGGAGGAGGTGTCAG+AGG 0.573069 1_1:+67920652 Msa0038440:CDS
GCAGGATGATAAAGTTCAGC+CGG 0.573080 1_1:+67921570 Msa0038440:CDS
GTGCCTTCTAAGCCGAGTGA+AGG 0.573219 1_1:+67923323 Msa0038440:CDS
ATATTCTATCGGAGTGGAGG+AGG 0.574722 1_1:+67920643 Msa0038440:CDS
AAAAGTGGTGGTGGTAGTAG+TGG 0.574855 1_1:+67920845 Msa0038440:CDS
ACACAAGAAGGATGTTATGA+AGG 0.575153 1_1:+67925974 Msa0038440:CDS
GGATGCGGCTCCGGTTGCGG+TGG 0.575979 1_1:+67920673 Msa0038440:CDS
GGGCATGACTCTTCCTGGCG+CGG 0.576478 1_1:+67922107 Msa0038440:CDS
ATATCAATGAACTCTTGGGA+AGG 0.576746 1_1:-67926723 None:intergenic
GTTGCGGTGGAAGAGAAACC+CGG 0.576756 1_1:+67920686 Msa0038440:CDS
AGAAAAGGAGAAGAAGGCAG+CGG 0.577587 1_1:+67921696 Msa0038440:CDS
AGTAAGAGTGAAGAGGTCGT+TGG 0.577832 1_1:+67921415 Msa0038440:CDS
GGGAAGAAGAAATCCTCGAA+GGG 0.578909 1_1:+67920998 Msa0038440:CDS
TATCAATGAACTCTTGGGAA+GGG 0.579843 1_1:-67926722 None:intergenic
TACTGCTGATTTAGATTCAG+AGG 0.580560 1_1:+67922248 Msa0038440:CDS
ACTTGAGAGACAGGCAGAAG+AGG 0.581232 1_1:+67921948 Msa0038440:CDS
AGATGAAAGTGTTGAAGCAA+CGG 0.581844 1_1:+67922221 Msa0038440:CDS
TTGGTCGTGGACATTATGCA+TGG 0.582868 1_1:+67923632 Msa0038440:CDS
ATATTACCATTGTCAACACT+AGG 0.583473 1_1:-67921391 None:intergenic
AGGATTGACAGGAGTGGTGA+GGG 0.584013 1_1:+67925846 Msa0038440:CDS
ATTTGGTGTGCTTGGTGATG+AGG 0.584128 1_1:+67920889 Msa0038440:CDS
TGCTACAGCACAACCTGCTG+CGG 0.584367 1_1:+67921537 Msa0038440:CDS
TAACATCCTTCTTGTGTACA+GGG 0.584393 1_1:-67925968 None:intergenic
TTCAATAACTTGAGGTCTCG+GGG 0.585880 1_1:+67923584 Msa0038440:CDS
TGATTTACTATACACATCTG+TGG 0.586356 1_1:+67928262 Msa0038440:three_prime_UTR
TAGAAAACAGGCCAAAGTTG+TGG 0.586435 1_1:+67923259 Msa0038440:CDS
TAATGGTGTTCTTCATGAAG+GGG 0.587624 1_1:+67925024 Msa0038440:CDS
ACTTTATCATCCTGCTGAGG+AGG 0.588843 1_1:-67921562 None:intergenic
TTTATGGTTATTCTCAATGG+AGG 0.590292 1_1:-67926757 None:intergenic
TGCAAGATCCCTAGCTTCAG+GGG 0.591230 1_1:-67926060 None:intergenic
AGCTTTGGAAGACGTGGAGT+CGG 0.591536 1_1:+67925815 Msa0038440:CDS
CCAGGGGCAGAACCTACTAC+AGG 0.591678 1_1:-67921595 None:intergenic
CGAGGTACCAATGTTCAAGA+AGG 0.591705 1_1:+67923419 Msa0038440:CDS
GAGAGAAAGCAAATATTCAC+GGG 0.592615 1_1:+67928328 Msa0038440:three_prime_UTR
GTTCAATATGAGGGTCACTC+AGG 0.592840 1_1:+67923902 Msa0038440:CDS
TGAAGTTGTTGAAGAAGTAG+TGG 0.593967 1_1:+67922320 Msa0038440:CDS
GGATGAAGATGATGATGTTG+AGG 0.594806 1_1:+67922341 Msa0038440:CDS
GAGAATCCTCCGCCGCAACA+AGG 0.596347 1_1:+67920575 Msa0038440:CDS
TGCAGCAAATTGGCGACCGA+AGG 0.597673 1_1:-67923349 None:intergenic
TGCCTTCTAAGCCGAGTGAA+GGG 0.599569 1_1:+67923324 Msa0038440:CDS
TCTGCATCATTGCATCTACA+AGG 0.602418 1_1:-67928128 None:intergenic
AGTGGTGGTGGTAGTAGTGG+TGG 0.603621 1_1:+67920848 Msa0038440:CDS
CAGGATTGACAGGAGTGGTG+AGG 0.604875 1_1:+67925845 Msa0038440:CDS
AAAATCAAAGAAGAAGGCTC+CGG 0.604903 1_1:+67920604 Msa0038440:CDS
GGCGTTTGGAGGCAATGAGG+AGG 0.605409 1_1:+67922064 Msa0038440:CDS
AAAGGCAGCTTTGGAAGACG+TGG 0.608385 1_1:+67925809 Msa0038440:CDS
TGGTGCTTCAGGAGAAAAGG+AGG 0.608601 1_1:+67921615 Msa0038440:CDS
CTATTTATCAGACAAAGAAA+GGG 0.609015 1_1:+67922154 Msa0038440:CDS
GATGACGATGAATATTCTAT+CGG 0.610557 1_1:+67920632 Msa0038440:CDS
ATAATGCTTCCAATGAGCCA+AGG 0.611270 1_1:-67925890 None:intergenic
TTGCTGCATCATGGGTCATG+TGG 0.613343 1_1:+67923364 Msa0038440:CDS
TACCAATGTTCAAGAAGGTG+AGG 0.614228 1_1:+67923424 Msa0038440:CDS
TAATATAAGTAAGAGTGAAG+AGG 0.616758 1_1:+67921408 Msa0038440:CDS
TTCACTCGGCTTAGAAGGCA+CGG 0.621700 1_1:-67923321 None:intergenic
GTTTCTTGTACAAGTCACTC+TGG 0.621796 1_1:-67928170 None:intergenic
CAGATTCTCAATAGCACAGG+GGG 0.622051 1_1:+67922087 Msa0038440:CDS
AAATTGTGTCTTCAACAAGA+AGG 0.623805 1_1:+67926229 Msa0038440:CDS
GGCAGATTCTCAATAGCACA+GGG 0.625757 1_1:+67922085 Msa0038440:CDS
CGGTGAGGGCGATGACGATG+AGG 0.627256 1_1:+67920952 Msa0038440:CDS
AACAGCAGAAAATGTTCGGG+AGG 0.628525 1_1:+67927179 Msa0038440:CDS
TAATGCTTCCAATGAGCCAA+GGG 0.629489 1_1:-67925889 None:intergenic
CCCGGCGTTTGGAGGCAATG+AGG 0.629537 1_1:+67922061 Msa0038440:CDS
TGAATATTCTATCGGAGTGG+AGG 0.629646 1_1:+67920640 Msa0038440:CDS
TGTCAATAAAGCTCGAATTG+TGG 0.631490 1_1:-67925160 None:intergenic
AAAACGAAAATTGCTTTGTG+CGG 0.632518 1_1:-67920405 None:intergenic
AGGGAAGAAGAAATCCTCGA+AGG 0.633393 1_1:+67920997 Msa0038440:CDS
CTCGAAGGGTTCGAAGAAAG+GGG 0.633881 1_1:+67921012 Msa0038440:CDS
GAGTGAAAGTGTAAATGTTG+TGG 0.635334 1_1:+67921357 Msa0038440:CDS
TCAGAATGAGTTCAATATGA+GGG 0.640267 1_1:+67923893 Msa0038440:CDS
ATAGGATGATCTGACTATGG+AGG 0.643473 1_1:+67927940 Msa0038440:intron
ACGAGTCATTCAATAACTTG+AGG 0.644529 1_1:+67923576 Msa0038440:CDS
CTACTGGTTATTGATACCCC+AGG 0.645521 1_1:+67923551 Msa0038440:CDS
TTGCGGTGGAAGAGAAACCC+GGG 0.650130 1_1:+67920687 Msa0038440:CDS
TGATGATGAAGAGAAATCGG+AGG 0.651638 1_1:+67920925 Msa0038440:CDS
AACCGGTTGTTAGCTTTACA+GGG 0.652337 1_1:+67920978 Msa0038440:CDS
GTATTCATTAAAGATAAACA+AGG 0.654702 1_1:+67928038 Msa0038440:three_prime_UTR
TTCATCTGTCTTGACAGCAG+CGG 0.655555 1_1:-67922205 None:intergenic
AAACCCTAATCTCATAAATG+GGG 0.655994 1_1:+67920525 Msa0038440:exon
TGAAAGTGTAAATGTTGTGG+AGG 0.660670 1_1:+67921360 Msa0038440:CDS
CGATGAATATTCTATCGGAG+TGG 0.661588 1_1:+67920637 Msa0038440:CDS
ATCATGGGTCATGTGGACAC+TGG 0.664092 1_1:+67923371 Msa0038440:CDS
GTTCAAGAAGGTGAGGCTGG+GGG 0.665074 1_1:+67923431 Msa0038440:CDS
GAAATCGGAGGTAACCGGTG+AGG 0.668178 1_1:+67920937 Msa0038440:CDS
ATTGAATGACTCGTGTCCTG+GGG 0.670625 1_1:-67923567 None:intergenic
TGGTGATGATGAGAAAGATG+AGG 0.670930 1_1:+67921240 Msa0038440:CDS
TTGAGCAGGATTGACAGGAG+TGG 0.672991 1_1:+67925840 Msa0038440:CDS
GTATCTGAGTCTGCTAAAGG+TGG 0.673325 1_1:+67921220 Msa0038440:CDS
TGAACTTTATCATCCTGCTG+AGG 0.673872 1_1:-67921565 None:intergenic
GTATCAATAACCAGTAGACC+GGG 0.674744 1_1:-67923545 None:intergenic
AAGGGTTCGAAGAAGGCAGG+TGG 0.678507 1_1:+67921157 Msa0038440:CDS
GAGAAGCCTAGTGTTGACAA+TGG 0.678840 1_1:+67921385 Msa0038440:CDS
TCACTCAGTTCAAGGAACAA+GGG 0.682333 1_1:+67924019 Msa0038440:CDS
GCGGAGGATTCTCGTCGTCG+CGG 0.685176 1_1:-67920565 None:intergenic
ATTGAGTAAAGCTATTCCGG+AGG 0.685642 1_1:+67921183 Msa0038440:CDS
GGTGCTTCAGGAGAAAAGGA+GGG 0.687014 1_1:+67921616 Msa0038440:CDS
AGCTGTAGAAGAGAAAGCTG+AGG 0.688379 1_1:+67921750 Msa0038440:CDS
GATGTCAATCTGAATGATAG+GGG 0.693218 1_1:+67922390 Msa0038440:CDS
TCGAAGGGTTCGAAGAAAGG+GGG 0.694476 1_1:+67921013 Msa0038440:CDS
AATCCTCCGCCGCAACAAGG+CGG 0.709148 1_1:+67920578 Msa0038440:CDS
TTACATGGACAACATTAAGG+AGG 0.709891 1_1:+67926148 Msa0038440:CDS
GAACATACGTGAAAGAACCA+AGG 0.716522 1_1:+67923493 Msa0038440:CDS
AAATGATTCGAAGACCAAAG+CGG 0.720285 1_1:+67921789 Msa0038440:CDS
GTAAGATCTTCAGAACACAT+GGG 0.723306 1_1:-67926205 None:intergenic
AGTACAATTACAAACCCTAG+AGG 0.738851 1_1:+67920272 None:intergenic
TATGGAGGAATGGAAGCTGG+TGG 0.758669 1_1:+67927955 Msa0038440:CDS
GCAGATTCTCAATAGCACAG+GGG 0.788332 1_1:+67922086 Msa0038440:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAAGTATTAAATTTTACA+AGG - chr1_1:67923136-67923155 None:intergenic 10.0%
!! ACTAATAAAGTTTATAATAT+AGG + chr1_1:67925125-67925144 Msa0038440:intron 10.0%
!! CTAATAAAGTTTATAATATA+GGG + chr1_1:67925126-67925145 Msa0038440:intron 10.0%
!!! AATTAGCAATTTTATATTTA+TGG + chr1_1:67926450-67926469 Msa0038440:intron 10.0%
!!! CATACATATTTTTTTTAATA+TGG + chr1_1:67927453-67927472 Msa0038440:intron 10.0%
!!! TTAATAATATACATTTTTTG+TGG + chr1_1:67927678-67927697 Msa0038440:intron 10.0%
!! AGAAAAAAATTCAAAAACTA+AGG - chr1_1:67922722-67922741 None:intergenic 15.0%
!! AATAAACTAGTAAATTATTG+TGG + chr1_1:67922804-67922823 Msa0038440:intron 15.0%
!! ATAAACTAGTAAATTATTGT+GGG + chr1_1:67922805-67922824 Msa0038440:intron 15.0%
!!! AGTTTTTTTGTTTTTGTTTT+TGG + chr1_1:67923931-67923950 Msa0038440:intron 15.0%
!! TATTACAAAAACAAAGAAAT+GGG + chr1_1:67924057-67924076 Msa0038440:CDS 15.0%
!! AAATAATTGATGTAAAATGT+AGG - chr1_1:67924439-67924458 None:intergenic 15.0%
!!! TTTTACATCAATTATTTTGT+TGG + chr1_1:67924442-67924461 Msa0038440:intron 15.0%
!! TATATGTAATACTATAGTTA+TGG - chr1_1:67924697-67924716 None:intergenic 15.0%
!! TTTAGTATTTAATATTTCAG+TGG + chr1_1:67924755-67924774 Msa0038440:intron 15.0%
!!! TGATTTGGAATATATTAAAA+AGG + chr1_1:67925791-67925810 Msa0038440:CDS 15.0%
!! AAAGAAATAAAAATGTATAG+AGG + chr1_1:67927091-67927110 Msa0038440:intron 15.0%
!! ATATTCTCAAAACTAATTAT+CGG + chr1_1:67927254-67927273 Msa0038440:CDS 15.0%
!!! TATTTTTTTTAATATGGATG+AGG + chr1_1:67927459-67927478 Msa0038440:intron 15.0%
!! ATTACTCATTTAACTATTAT+TGG + chr1_1:67927871-67927890 Msa0038440:intron 15.0%
!! AATTCACTAAAAGTAATTTA+GGG + chr1_1:67928618-67928637 Msa0038440:three_prime_UTR 15.0%
!!! ATCATCATCATTATCTTTTT+TGG - chr1_1:67920744-67920763 None:intergenic 20.0%
!!! CTTATTCTTTTTCTTATTCT+TGG - chr1_1:67921446-67921465 None:intergenic 20.0%
!! AAAAAAGAAGAAAAAGAAGA+AGG + chr1_1:67921669-67921688 Msa0038440:CDS 20.0%
!!! TTAATCTCTTTTTTGACAAT+TGG - chr1_1:67922453-67922472 None:intergenic 20.0%
!! GTCAAAAAAGAGATTAAAAA+TGG + chr1_1:67922456-67922475 Msa0038440:CDS 20.0%
!!! AATATAAATTGATGCTACTT+TGG + chr1_1:67922678-67922697 Msa0038440:intron 20.0%
!!! TTCCAATATATGTTTTTTAC+AGG + chr1_1:67923757-67923776 Msa0038440:intron 20.0%
!! AACCTGTAAAAAACATATAT+TGG - chr1_1:67923762-67923781 None:intergenic 20.0%
!! GTATTACAAAAACAAAGAAA+TGG + chr1_1:67924056-67924075 Msa0038440:CDS 20.0%
!! ACTAATAGTAATAACATATC+CGG - chr1_1:67924791-67924810 None:intergenic 20.0%
!!! ATTGATGTTGTTTTAGTTAA+TGG + chr1_1:67925007-67925026 Msa0038440:CDS 20.0%
!!! ATTTATTTTAAAGCTGGTTT+GGG + chr1_1:67925237-67925256 Msa0038440:intron 20.0%
!! TCATCTATTTGATCAATTTA+AGG + chr1_1:67926124-67926143 Msa0038440:CDS 20.0%
!!! AATTTTATATTTATGGCCTA+TGG + chr1_1:67926457-67926476 Msa0038440:intron 20.0%
!! TATTCTCAAAACTAATTATC+GGG + chr1_1:67927255-67927274 Msa0038440:CDS 20.0%
!! TTGAAACTATGTAAAATAAG+TGG - chr1_1:67927624-67927643 None:intergenic 20.0%
!! TGTATATTATTAACCACTTT+CGG - chr1_1:67927671-67927690 None:intergenic 20.0%
!! TAAAAAATTGACCCAAAAAA+GGG + chr1_1:67927787-67927806 Msa0038440:intron 20.0%
!!! TAACTATTATTGGATTTTGT+TGG + chr1_1:67927881-67927900 Msa0038440:intron 20.0%
!! GTATTCATTAAAGATAAACA+AGG + chr1_1:67928038-67928057 Msa0038440:three_prime_UTR 20.0%
!! GTATAGTAAATCACAAAATT+TGG - chr1_1:67928255-67928274 None:intergenic 20.0%
!!! ATTTTCCATTTGTATACATT+TGG + chr1_1:67928395-67928414 Msa0038440:three_prime_UTR 20.0%
!! GAATTCACTAAAAGTAATTT+AGG + chr1_1:67928617-67928636 Msa0038440:three_prime_UTR 20.0%
! AAAACCCTAATCTCATAAAT+GGG + chr1_1:67920524-67920543 Msa0038440:exon 25.0%
!!! TGAATGAAATTGTTTTTGCT+GGG + chr1_1:67920801-67920820 Msa0038440:CDS 25.0%
!! TAATGATGATGAAGAGAAAT+CGG + chr1_1:67920922-67920941 Msa0038440:CDS 25.0%
! TAAGAAAAAGAAGTCATCAA+AGG + chr1_1:67921138-67921157 Msa0038440:CDS 25.0%
! AAGAAAAAGAAGTCATCAAA+GGG + chr1_1:67921139-67921158 Msa0038440:CDS 25.0%
!! AAGTCTTCTAAAAAGAAAAG+TGG + chr1_1:67921295-67921314 Msa0038440:CDS 25.0%
! TAATATAAGTAAGAGTGAAG+AGG + chr1_1:67921408-67921427 Msa0038440:CDS 25.0%
! AAAAAGAATAAGAAGAAGAG+TGG + chr1_1:67921454-67921473 Msa0038440:CDS 25.0%
! AAAAGAATAAGAAGAAGAGT+GGG + chr1_1:67921455-67921474 Msa0038440:CDS 25.0%
!!! CTTCTTTTTCTTCTTTTTTG+CGG - chr1_1:67921668-67921687 None:intergenic 25.0%
! AAAGAAGAAGGAAAAAGAAA+AGG + chr1_1:67921681-67921700 Msa0038440:CDS 25.0%
! AGAAAAAAAGAAAAAGGAAG+AGG + chr1_1:67921879-67921898 Msa0038440:CDS 25.0%
! TAGAAAGAAGGAAAAAGAAA+AGG + chr1_1:67921978-67921997 Msa0038440:CDS 25.0%
!!! TGATAAATAGGTTTTTTGGA+TGG - chr1_1:67922144-67922163 None:intergenic 25.0%
!!! TGTCTGATAAATAGGTTTTT+TGG - chr1_1:67922148-67922167 None:intergenic 25.0%
! CTATTTATCAGACAAAGAAA+GGG + chr1_1:67922154-67922173 Msa0038440:CDS 25.0%
! TAAAATTCTAACACTACAGT+AGG - chr1_1:67922656-67922675 None:intergenic 25.0%
!!! TGCTACTTTGGAATATTTTA+TGG + chr1_1:67922690-67922709 Msa0038440:intron 25.0%
!!! GTTTTTGAATTTTTTTCTGC+TGG + chr1_1:67922724-67922743 Msa0038440:intron 25.0%
! AAGAAATAGAAATACAGTGT+TGG - chr1_1:67922913-67922932 None:intergenic 25.0%
!! TCTATGTGATATTGCAATTT+TGG + chr1_1:67923613-67923632 Msa0038440:CDS 25.0%
! CACTCAATCTATTAAAAATG+AGG + chr1_1:67923678-67923697 Msa0038440:CDS 25.0%
! ATTCATTGTTGCATTGAATA+AGG + chr1_1:67923709-67923728 Msa0038440:CDS 25.0%
!!! TTTTTGTTTTTGGTAAGTTG+TGG + chr1_1:67923941-67923960 Msa0038440:intron 25.0%
! TGAAACAAGAAAAATTAGCA+TGG - chr1_1:67923988-67924007 None:intergenic 25.0%
! TGTAGCATTGTATTACAAAA+GGG + chr1_1:67924153-67924172 Msa0038440:intron 25.0%
!!! AATAGTGTTGACGATAATAT+AGG + chr1_1:67924377-67924396 Msa0038440:intron 25.0%
!!! TCAATTATTTTGTTGGTAAC+AGG + chr1_1:67924449-67924468 Msa0038440:intron 25.0%
!! TTTTCACTATCATTAGAAAG+AGG + chr1_1:67924505-67924524 Msa0038440:intron 25.0%
! ATTTAATATTTCAGTGGTGA+AGG + chr1_1:67924761-67924780 Msa0038440:intron 25.0%
! CTAATAGTAATAACATATCC+GGG - chr1_1:67924790-67924809 None:intergenic 25.0%
! TGTTATTACTATTAGTTCAG+TGG + chr1_1:67924795-67924814 Msa0038440:CDS 25.0%
! CAAATAACAGTTAAACAGTT+AGG - chr1_1:67924928-67924947 None:intergenic 25.0%
! AAAGCAAGTATTAATACATG+TGG - chr1_1:67925096-67925115 None:intergenic 25.0%
! ATCGAATGCAAAAGATATAA+TGG - chr1_1:67925219-67925238 None:intergenic 25.0%
!!! CATTCGATTTATTTTAAAGC+TGG + chr1_1:67925231-67925250 Msa0038440:intron 25.0%
!!! GATTTATTTTAAAGCTGGTT+TGG + chr1_1:67925236-67925255 Msa0038440:intron 25.0%
! TTATGAGATGTTTAACATGA+AGG + chr1_1:67925338-67925357 Msa0038440:intron 25.0%
!! ATTTTTCCATCATTGGAATT+TGG + chr1_1:67925421-67925440 Msa0038440:intron 25.0%
!! AATTTGGAATATGTCAATTG+AGG + chr1_1:67925437-67925456 Msa0038440:intron 25.0%
!! ATTTGGAATATGTCAATTGA+GGG + chr1_1:67925438-67925457 Msa0038440:intron 25.0%
! ATCAATATCATTAAGTACCT+GGG - chr1_1:67925619-67925638 None:intergenic 25.0%
! AAAACCATAGTTATATAGAC+TGG - chr1_1:67925654-67925673 None:intergenic 25.0%
!!! ATATGATTTCTTGCTATTTC+AGG + chr1_1:67925716-67925735 Msa0038440:intron 25.0%
!!! TATGATTTCTTGCTATTTCA+GGG + chr1_1:67925717-67925736 Msa0038440:intron 25.0%
! ATATATTCCAAATCATCATC+AGG - chr1_1:67925786-67925805 None:intergenic 25.0%
! ATATATTAAAAAGGCAGCTT+TGG + chr1_1:67925800-67925819 Msa0038440:CDS 25.0%
! CAACTAATGAATTTATACCA+AGG - chr1_1:67926392-67926411 None:intergenic 25.0%
!! AAATGAGGAGATAGAAATTT+TGG + chr1_1:67926503-67926522 Msa0038440:intron 25.0%
!! AACATTTTTACTGTATCAGA+AGG - chr1_1:67926545-67926564 None:intergenic 25.0%
! TATCTCAAACTTCGTTTAAT+GGG - chr1_1:67926886-67926905 None:intergenic 25.0%
! ATATCTCAAACTTCGTTTAA+TGG - chr1_1:67926887-67926906 None:intergenic 25.0%
!! ATTAAACGAAGTTTGAGATA+TGG + chr1_1:67926886-67926905 Msa0038440:intron 25.0%
! TGAAATTTATGTTCCAAAAG+TGG - chr1_1:67927558-67927577 None:intergenic 25.0%
!! AAAAAATTCACAGAAGTACA+TGG + chr1_1:67927642-67927661 Msa0038440:intron 25.0%
!! AAAATACTCCTCTTTTTCTT+AGG + chr1_1:67927751-67927770 Msa0038440:intron 25.0%
!! AAATACTCCTCTTTTTCTTA+GGG + chr1_1:67927752-67927771 Msa0038440:intron 25.0%
!!! TTTTTTTCCCTAAGAAAAAG+AGG - chr1_1:67927762-67927781 None:intergenic 25.0%
! GTAAAAAATTGACCCAAAAA+AGG + chr1_1:67927786-67927805 Msa0038440:intron 25.0%
! GTTAAATGAGTAATGATAAC+TGG - chr1_1:67927865-67927884 None:intergenic 25.0%
! TACCATTGAATTATTGACAT+AGG + chr1_1:67927922-67927941 Msa0038440:intron 25.0%
! ATCCTATGTCAATAATTCAA+TGG - chr1_1:67927927-67927946 None:intergenic 25.0%
! TTTAGTGAATTCAAACTATC+AGG - chr1_1:67928609-67928628 None:intergenic 25.0%
TATAAAAACACAGTAGCGAA+TGG - chr1_1:67920342-67920361 None:intergenic 30.0%
AAAACGAAAATTGCTTTGTG+CGG - chr1_1:67920408-67920427 None:intergenic 30.0%
GTACGAAATTTGTGTAAAAG+GGG - chr1_1:67920483-67920502 None:intergenic 30.0%
CGTACGAAATTTGTGTAAAA+GGG - chr1_1:67920484-67920503 None:intergenic 30.0%
TCGTACGAAATTTGTGTAAA+AGG - chr1_1:67920485-67920504 None:intergenic 30.0%
GAAAACCCTAATCTCATAAA+TGG + chr1_1:67920523-67920542 Msa0038440:exon 30.0%
AAACCCTAATCTCATAAATG+GGG + chr1_1:67920525-67920544 Msa0038440:exon 30.0%
GATGACGATGAATATTCTAT+CGG + chr1_1:67920632-67920651 Msa0038440:CDS 30.0%
! TTTCTTACCTTTCTTTTTCC+CGG - chr1_1:67920708-67920727 None:intergenic 30.0%
!!! GTGAATGAAATTGTTTTTGC+TGG + chr1_1:67920800-67920819 Msa0038440:CDS 30.0%
! TTTTTGCTGGGAAGAAAAAA+GGG + chr1_1:67920813-67920832 Msa0038440:CDS 30.0%
AAAGGGAAATCGAAAAAAAG+TGG + chr1_1:67920830-67920849 Msa0038440:CDS 30.0%
TTCATTGAGTAAAGCTATTC+CGG + chr1_1:67921180-67921199 Msa0038440:CDS 30.0%
! GATGTTTCTTTTGCATTTAC+TGG + chr1_1:67921265-67921284 Msa0038440:CDS 30.0%
ATATTACCATTGTCAACACT+AGG - chr1_1:67921394-67921413 None:intergenic 30.0%
!! GTCTTCGAATCATTTTTCTT+CGG - chr1_1:67921784-67921803 None:intergenic 30.0%
GGCTGAAGAAAAAAAGAAAA+AGG + chr1_1:67921873-67921892 Msa0038440:CDS 30.0%
CCTTTCTTTGTCTGATAAAT+AGG - chr1_1:67922156-67922175 None:intergenic 30.0%
CCTATTTATCAGACAAAGAA+AGG + chr1_1:67922153-67922172 Msa0038440:CDS 30.0%
ACAACGAATCGAAATCATAA+TGG + chr1_1:67922180-67922199 Msa0038440:CDS 30.0%
ATGATGTCAATCTGAATGAT+AGG + chr1_1:67922388-67922407 Msa0038440:CDS 30.0%
TGATGTCAATCTGAATGATA+GGG + chr1_1:67922389-67922408 Msa0038440:CDS 30.0%
!!! TCTTTTTTGACAATTGGTTC+AGG - chr1_1:67922447-67922466 None:intergenic 30.0%
AAGTTTCAAGCATAAATGTC+AGG - chr1_1:67922538-67922557 None:intergenic 30.0%
! CTTGATACCATATCAGTTTT+GGG + chr1_1:67922578-67922597 Msa0038440:intron 30.0%
ATATATTTCCTATGCTAGTG+AGG - chr1_1:67922630-67922649 None:intergenic 30.0%
TTGTAACCTAATAATGTCAC+CGG + chr1_1:67922777-67922796 Msa0038440:intron 30.0%
! ATTTACTAGTTTATTGCAGC+CGG - chr1_1:67922799-67922818 None:intergenic 30.0%
CAGGTCAATCAAACATTATT+AGG - chr1_1:67923053-67923072 None:intergenic 30.0%
AATAATGTTTGATTGACCTG+CGG + chr1_1:67923053-67923072 Msa0038440:intron 30.0%
AGAAACTGAAGATAGAAAAC+AGG + chr1_1:67923247-67923266 Msa0038440:CDS 30.0%
TGGTTGAGGATAAAAAGAAA+AGG + chr1_1:67923279-67923298 Msa0038440:CDS 30.0%
TTCAGAATGAGTTCAATATG+AGG + chr1_1:67923892-67923911 Msa0038440:CDS 30.0%
TCAGAATGAGTTCAATATGA+GGG + chr1_1:67923893-67923912 Msa0038440:CDS 30.0%
AATACAATGCTACACAAAAG+AGG - chr1_1:67924147-67924166 None:intergenic 30.0%
GTGTAGCATTGTATTACAAA+AGG + chr1_1:67924152-67924171 Msa0038440:intron 30.0%
GTAGGCATCTTAAAAAATGT+AGG - chr1_1:67924421-67924440 None:intergenic 30.0%
AGACAAGTTAGACACAATTT+GGG - chr1_1:67924593-67924612 None:intergenic 30.0%
TCATCCAAAGGATGATAATT+TGG + chr1_1:67924628-67924647 Msa0038440:intron 30.0%
! TGAATGCCAAATCTTTGTTT+CGG + chr1_1:67924664-67924683 Msa0038440:intron 30.0%
TAATCTGCTGAATACTTTGT+CGG + chr1_1:67924715-67924734 Msa0038440:intron 30.0%
! GTTTAACTGTTATTTGACTG+TGG + chr1_1:67924932-67924951 Msa0038440:intron 30.0%
AATAACCTTGACTTCCAAAA+CGG - chr1_1:67924969-67924988 None:intergenic 30.0%
TTAATGGTGTTCTTCATGAA+GGG + chr1_1:67925023-67925042 Msa0038440:CDS 30.0%
AAATAACGTGTTAGAAGCTT+AGG + chr1_1:67925309-67925328 Msa0038440:intron 30.0%
!! CAACTATACTTGCTATAACT+TGG - chr1_1:67925366-67925385 None:intergenic 30.0%
CATATTCCAAATTCCAATGA+TGG - chr1_1:67925430-67925449 None:intergenic 30.0%
! TTTGGAATATGTCAATTGAG+GGG + chr1_1:67925439-67925458 Msa0038440:intron 30.0%
AAATATAGCTCCTCTGTTAA+AGG - chr1_1:67925494-67925513 None:intergenic 30.0%
AGTAATGGTTGTCTAATTTC+AGG + chr1_1:67925539-67925558 Msa0038440:intron 30.0%
GTAATGGTTGTCTAATTTCA+GGG + chr1_1:67925540-67925559 Msa0038440:intron 30.0%
AAAGAAATCAAAGCTGCTAT+GGG + chr1_1:67925579-67925598 Msa0038440:CDS 30.0%
GATCAATATCATTAAGTACC+TGG - chr1_1:67925620-67925639 None:intergenic 30.0%
TATGCCAGTCTATATAACTA+TGG + chr1_1:67925647-67925666 Msa0038440:intron 30.0%
!! ATGATTTCTTGCTATTTCAG+GGG + chr1_1:67925718-67925737 Msa0038440:intron 30.0%
!! TTTCTTTTCAAGCATTACAC+TGG - chr1_1:67926000-67926019 None:intergenic 30.0%
! GGGTGTGAAAATTTTTATAG+CGG + chr1_1:67926091-67926110 Msa0038440:CDS 30.0%
! TGATCAATTTAAGGCTTACA+TGG + chr1_1:67926133-67926152 Msa0038440:CDS 30.0%
TTCTTGTTGAAGACACAATT+TGG - chr1_1:67926230-67926249 None:intergenic 30.0%
AAATTGTGTCTTCAACAAGA+AGG + chr1_1:67926229-67926248 Msa0038440:CDS 30.0%
ATATCAACTCCCAAAACAAT+CGG - chr1_1:67926257-67926276 None:intergenic 30.0%
!!! TATCCTTGAAGGCATTTTAA+AGG + chr1_1:67926274-67926293 Msa0038440:CDS 30.0%
!! ATACCTTTAAAATGCCTTCA+AGG - chr1_1:67926280-67926299 None:intergenic 30.0%
CTTGCATCTGTATTTGAAAA+AGG + chr1_1:67926427-67926446 Msa0038440:intron 30.0%
! TGTTCAATGCACAATTTGTT+TGG + chr1_1:67926641-67926660 Msa0038440:intron 30.0%
TCTGTCAAGTAGACAATATT+AGG - chr1_1:67926683-67926702 None:intergenic 30.0%
ATATTGTCTACTTGACAGAT+TGG + chr1_1:67926684-67926703 Msa0038440:intron 30.0%
ACCAATATCAATGAACTCTT+GGG - chr1_1:67926730-67926749 None:intergenic 30.0%
TTTATGGTTATTCTCAATGG+AGG - chr1_1:67926760-67926779 None:intergenic 30.0%
CATTGAGAATAACCATAAAC+CGG + chr1_1:67926761-67926780 Msa0038440:CDS 30.0%
AATTCAAGCACATACCTTAA+TGG - chr1_1:67926817-67926836 None:intergenic 30.0%
ATCTCAAACTTCGTTTAATG+GGG - chr1_1:67926885-67926904 None:intergenic 30.0%
!!! ATCCATTTTCACTGATTTAC+AGG + chr1_1:67927040-67927059 Msa0038440:intron 30.0%
AACTTGTAAGCCATATTTCA+CGG + chr1_1:67927221-67927240 Msa0038440:CDS 30.0%
!!! ACGGTAACAGTACAATTTTT+TGG + chr1_1:67927405-67927424 Msa0038440:intron 30.0%
! TGGTTATGCTTTGCATTTTT+CGG - chr1_1:67927604-67927623 None:intergenic 30.0%
ACATATACCACACCTTTATA+CGG - chr1_1:67927822-67927841 None:intergenic 30.0%
! AAGGTTTTCAGTGAAATGTT+CGG + chr1_1:67928057-67928076 Msa0038440:three_prime_UTR 30.0%
TGATTTACTATACACATCTG+TGG + chr1_1:67928262-67928281 Msa0038440:three_prime_UTR 30.0%
TGAGAGAAAGCAAATATTCA+CGG + chr1_1:67928327-67928346 Msa0038440:three_prime_UTR 30.0%
GAACACCAAATGTATACAAA+TGG - chr1_1:67928403-67928422 None:intergenic 30.0%
!!! ATGCTTTGCATTTTGGTTTT+GGG + chr1_1:67928424-67928443 Msa0038440:three_prime_UTR 30.0%
TTTCAATGTAACAGCGAAAG+AGG - chr1_1:67920437-67920456 None:intergenic 35.0%
CTTCCCCATTTATGAGATTA+GGG - chr1_1:67920531-67920550 None:intergenic 35.0%
TCTTCCCCATTTATGAGATT+AGG - chr1_1:67920532-67920551 None:intergenic 35.0%
AAAATCAAAGAAGAAGGCTC+CGG + chr1_1:67920604-67920623 Msa0038440:CDS 35.0%
TATTCATCGTCATCGATAAC+CGG - chr1_1:67920626-67920645 None:intergenic 35.0%
! TTCTTACCTTTCTTTTTCCC+GGG - chr1_1:67920707-67920726 None:intergenic 35.0%
GGGAAAAAGAAAGGTAAGAA+AGG + chr1_1:67920707-67920726 Msa0038440:CDS 35.0%
! GTTTTTGCTGGGAAGAAAAA+AGG + chr1_1:67920812-67920831 Msa0038440:CDS 35.0%
AAATCGAAAAAAAGTGGTGG+TGG + chr1_1:67920836-67920855 Msa0038440:CDS 35.0%
GCATTAGATGAGAATGATGA+TGG + chr1_1:67921052-67921071 Msa0038440:CDS 35.0%
AGAGGAGAGTAAGAATGAAA+AGG + chr1_1:67921078-67921097 Msa0038440:CDS 35.0%
TGATGAACCAATCACTTTCT+CGG + chr1_1:67921114-67921133 Msa0038440:CDS 35.0%
TGAGTGATGAAATCGAGTTT+GGG + chr1_1:67921335-67921354 Msa0038440:CDS 35.0%
! GAGTGAAAGTGTAAATGTTG+TGG + chr1_1:67921357-67921376 Msa0038440:CDS 35.0%
! TGAAAGTGTAAATGTTGTGG+AGG + chr1_1:67921360-67921379 Msa0038440:CDS 35.0%
GGAAAAAGAAAAGGAGAAGA+AGG + chr1_1:67921690-67921709 Msa0038440:CDS 35.0%
TCTTCTACAGCTTCAATTAC+CGG - chr1_1:67921742-67921761 None:intergenic 35.0%
AAATGATTCGAAGACCAAAG+CGG + chr1_1:67921789-67921808 Msa0038440:CDS 35.0%
CAGGAAGGTAAATTGTTAAC+TGG + chr1_1:67922021-67922040 Msa0038440:CDS 35.0%
!! AGATGAAAGTGTTGAAGCAA+CGG + chr1_1:67922221-67922240 Msa0038440:CDS 35.0%
!! TACTGCTGATTTAGATTCAG+AGG + chr1_1:67922248-67922267 Msa0038440:CDS 35.0%
ACTACTTCTTCAACAACTTC+AGG - chr1_1:67922321-67922340 None:intergenic 35.0%
TGAAGTTGTTGAAGAAGTAG+TGG + chr1_1:67922320-67922339 Msa0038440:CDS 35.0%
! ATGATGATGTTGAGGATGAA+TGG + chr1_1:67922349-67922368 Msa0038440:CDS 35.0%
! TGATGATGTTGAGGATGAAT+GGG + chr1_1:67922350-67922369 Msa0038440:CDS 35.0%
GATGTCAATCTGAATGATAG+GGG + chr1_1:67922390-67922409 Msa0038440:CDS 35.0%
!! AACTCACCAGCATTTTTAGA+AGG - chr1_1:67922486-67922505 None:intergenic 35.0%
! TGGTGAGTTTTGCATTCTAT+TGG + chr1_1:67922497-67922516 Msa0038440:intron 35.0%
! GCTTGATACCATATCAGTTT+TGG + chr1_1:67922577-67922596 Msa0038440:intron 35.0%
AATAGGACCCAAAACTGATA+TGG - chr1_1:67922588-67922607 None:intergenic 35.0%
CGAAAAAACCAAGAAGCAAT+AGG - chr1_1:67922605-67922624 None:intergenic 35.0%
TGGTTTCAAACCTGGAATTA+TGG + chr1_1:67922857-67922876 Msa0038440:intron 35.0%
TTTATCACTGCCATAATTCC+AGG - chr1_1:67922870-67922889 None:intergenic 35.0%
! TGGCAGTGATAAAATTTTCC+TGG + chr1_1:67922877-67922896 Msa0038440:intron 35.0%
!! AGTGTTGGCAAATATAAACC+AGG - chr1_1:67922898-67922917 None:intergenic 35.0%
ATACAGGGAGATCTAATACT+TGG - chr1_1:67922992-67923011 None:intergenic 35.0%
ACTTGACACAGACAAAAGTT+TGG - chr1_1:67923028-67923047 None:intergenic 35.0%
! AAACTTTTGTCTGTGTCAAG+TGG + chr1_1:67923027-67923046 Msa0038440:intron 35.0%
TTTATCCTCAACCACAACTT+TGG - chr1_1:67923273-67923292 None:intergenic 35.0%
ACGAGTCATTCAATAACTTG+AGG + chr1_1:67923576-67923595 Msa0038440:CDS 35.0%
CATTCAATAACTTGAGGTCT+CGG + chr1_1:67923582-67923601 Msa0038440:CDS 35.0%
ATTCAATAACTTGAGGTCTC+GGG + chr1_1:67923583-67923602 Msa0038440:CDS 35.0%
!! TGATATTGCAATTTTGGTCG+TGG + chr1_1:67923619-67923638 Msa0038440:CDS 35.0%
TTGAGTGACTCTATAGTTTG+TGG - chr1_1:67923665-67923684 None:intergenic 35.0%
! TGTGTCATTGCTTTACGAAT+TGG - chr1_1:67923858-67923877 None:intergenic 35.0%
AGTTACCTTATTGCACTTGT+AGG - chr1_1:67924102-67924121 None:intergenic 35.0%
!! AAAGAGGTATTATGGCTACA+AGG - chr1_1:67924131-67924150 None:intergenic 35.0%
!! GCTACACAAAAGAGGTATTA+TGG - chr1_1:67924139-67924158 None:intergenic 35.0%
ACCATATTGATGTTCCAGAT+GGG + chr1_1:67924209-67924228 Msa0038440:intron 35.0%
TTCATGTGACTAAAAAGCTG+TGG - chr1_1:67924267-67924286 None:intergenic 35.0%
TACATATGTAATCGCCTCAA+CGG - chr1_1:67924302-67924321 None:intergenic 35.0%
ACAATTCAACATCCTAGCAT+TGG - chr1_1:67924338-67924357 None:intergenic 35.0%
ACAAGTTAGACACAATTTGG+GGG - chr1_1:67924591-67924610 None:intergenic 35.0%
GACAAGTTAGACACAATTTG+GGG - chr1_1:67924592-67924611 None:intergenic 35.0%
CAGACAAGTTAGACACAATT+TGG - chr1_1:67924594-67924613 None:intergenic 35.0%
CCTACCAAATTATCATCCTT+TGG - chr1_1:67924635-67924654 None:intergenic 35.0%
CCAAAGGATGATAATTTGGT+AGG + chr1_1:67924632-67924651 Msa0038440:intron 35.0%
! GAATGCCAAATCTTTGTTTC+GGG + chr1_1:67924665-67924684 Msa0038440:intron 35.0%
! TTTTGCCCGAAACAAAGATT+TGG - chr1_1:67924673-67924692 None:intergenic 35.0%
TTGGAAGTCAAGGTTATTGA+AGG + chr1_1:67924971-67924990 Msa0038440:CDS 35.0%
CAACATCAATAGTAGTTCCA+TGG - chr1_1:67924997-67925016 None:intergenic 35.0%
GTTAATGGTGTTCTTCATGA+AGG + chr1_1:67925022-67925041 Msa0038440:CDS 35.0%
TAATGGTGTTCTTCATGAAG+GGG + chr1_1:67925024-67925043 Msa0038440:CDS 35.0%
! AATAGTTGTATCTGGAATGC+AGG + chr1_1:67925051-67925070 Msa0038440:CDS 35.0%
TGTCAATAAAGCTCGAATTG+TGG - chr1_1:67925163-67925182 None:intergenic 35.0%
TTAACACGAAGTTCCTTCAT+TGG - chr1_1:67925192-67925211 None:intergenic 35.0%
AATGAAGGAACTTCGTGTTA+AGG + chr1_1:67925191-67925210 Msa0038440:CDS 35.0%
!!! ATTTTAAAGCTGGTTTGGGT+AGG + chr1_1:67925241-67925260 Msa0038440:intron 35.0%
CTCATATTGTTATGCTGAAG+AGG + chr1_1:67925393-67925412 Msa0038440:intron 35.0%
ATATTGTTATGCTGAAGAGG+TGG + chr1_1:67925396-67925415 Msa0038440:intron 35.0%
AATATGTCAATTGAGGGGAT+GGG + chr1_1:67925444-67925463 Msa0038440:intron 35.0%
AAACATCCTCTTTAGTCTGA+GGG + chr1_1:67925467-67925486 Msa0038440:intron 35.0%
TATGTCTTCCAGCTAAGTAA+TGG + chr1_1:67925524-67925543 Msa0038440:intron 35.0%
TTAGACAACCATTACTTAGC+TGG - chr1_1:67925535-67925554 None:intergenic 35.0%
! CAGCTTTGATTTCTTTGTGA+TGG - chr1_1:67925575-67925594 None:intergenic 35.0%
CAAAGAAATCAAAGCTGCTA+TGG + chr1_1:67925578-67925597 Msa0038440:CDS 35.0%
CTAACAGGAATATTCACTTC+TGG - chr1_1:67925933-67925952 None:intergenic 35.0%
CCTATGTTTATAGCACTAAC+AGG - chr1_1:67925948-67925967 None:intergenic 35.0%
CCTGTTAGTGCTATAAACAT+AGG + chr1_1:67925945-67925964 Msa0038440:CDS 35.0%
TAACATCCTTCTTGTGTACA+GGG - chr1_1:67925971-67925990 None:intergenic 35.0%
ATAACATCCTTCTTGTGTAC+AGG - chr1_1:67925972-67925991 None:intergenic 35.0%
ACACAAGAAGGATGTTATGA+AGG + chr1_1:67925974-67925993 Msa0038440:CDS 35.0%
! ACGAGAGTATGCTACTATAT+TGG + chr1_1:67926019-67926038 Msa0038440:CDS 35.0%
TTACATGGACAACATTAAGG+AGG + chr1_1:67926148-67926167 Msa0038440:CDS 35.0%
GGAGAAAAAGAAAGAATCTG+CGG + chr1_1:67926169-67926188 Msa0038440:CDS 35.0%
GTAAGATCTTCAGAACACAT+GGG - chr1_1:67926208-67926227 None:intergenic 35.0%
! AAGAAGGATCCGATTGTTTT+GGG + chr1_1:67926245-67926264 Msa0038440:CDS 35.0%
! CAGATGAACTTGTTTCAATG+TGG + chr1_1:67926314-67926333 Msa0038440:intron 35.0%
TAAGATTGTATTGCTTGCCT+TGG + chr1_1:67926372-67926391 Msa0038440:intron 35.0%
TATGGCCTATGGATAAGTTT+AGG + chr1_1:67926468-67926487 Msa0038440:intron 35.0%
TGTGCATTGAACACATAACA+GGG - chr1_1:67926634-67926653 None:intergenic 35.0%
TTGTGCATTGAACACATAAC+AGG - chr1_1:67926635-67926654 None:intergenic 35.0%
TATCAATGAACTCTTGGGAA+GGG - chr1_1:67926725-67926744 None:intergenic 35.0%
ATATCAATGAACTCTTGGGA+AGG - chr1_1:67926726-67926745 None:intergenic 35.0%
TCCCAAGAGTTCATTGATAT+TGG + chr1_1:67926726-67926745 Msa0038440:CDS 35.0%
GACCAATATCAATGAACTCT+TGG - chr1_1:67926731-67926750 None:intergenic 35.0%
CGGTTTATGGTTATTCTCAA+TGG - chr1_1:67926763-67926782 None:intergenic 35.0%
!! AACTAACTTGTTTACACCGA+TGG + chr1_1:67927008-67927027 Msa0038440:intron 35.0%
!!! AATGGATGTCACTTTTCCAT+CGG - chr1_1:67927027-67927046 None:intergenic 35.0%
CACCTGTAAATCAGTGAAAA+TGG - chr1_1:67927045-67927064 None:intergenic 35.0%
!!! CATTTTCACTGATTTACAGG+TGG + chr1_1:67927043-67927062 Msa0038440:intron 35.0%
GAAGAACAGCAGAAAATGTT+CGG + chr1_1:67927175-67927194 Msa0038440:CDS 35.0%
AAGAACAGCAGAAAATGTTC+GGG + chr1_1:67927176-67927195 Msa0038440:CDS 35.0%
CAATAGATCTCCGTGAAATA+TGG - chr1_1:67927234-67927253 None:intergenic 35.0%
GTGTTGAGTTATCATTACTC+TGG - chr1_1:67927337-67927356 None:intergenic 35.0%
CCTTAATGCAGTAGTGAAAT+TGG - chr1_1:67927515-67927534 None:intergenic 35.0%
CCAATTTCACTACTGCATTA+AGG + chr1_1:67927512-67927531 Msa0038440:intron 35.0%
TCGGGTTAATATAGTCAAAG+TGG - chr1_1:67927585-67927604 None:intergenic 35.0%
! GGTTATGCTTTGCATTTTTC+GGG - chr1_1:67927603-67927622 None:intergenic 35.0%
TGAAATGTTCGGTATAATGC+CGG + chr1_1:67928068-67928087 Msa0038440:three_prime_UTR 35.0%
ATACACATCTGTGGTATACA+TGG + chr1_1:67928271-67928290 Msa0038440:three_prime_UTR 35.0%
GAGAGAAAGCAAATATTCAC+GGG + chr1_1:67928328-67928347 Msa0038440:three_prime_UTR 35.0%
CAAAACCAAAATGCAAAGCA+TGG - chr1_1:67928425-67928444 None:intergenic 35.0%
!!! CATGCTTTGCATTTTGGTTT+TGG + chr1_1:67928423-67928442 Msa0038440:three_prime_UTR 35.0%
!!! TTGCATTTTGGTTTTGGGAA+CGG + chr1_1:67928429-67928448 Msa0038440:three_prime_UTR 35.0%
! TGCAGCATATACTTTTCACA+TGG + chr1_1:67928499-67928518 Msa0038440:three_prime_UTR 35.0%
ATTGGACGATTTCTGTTCAA+AGG - chr1_1:67928571-67928590 None:intergenic 35.0%
AGGACAGAAATTGTCATCAT+TGG - chr1_1:67928589-67928608 None:intergenic 35.0%
CGGTGGAAAATCAAAGAAGA+AGG + chr1_1:67920598-67920617 Msa0038440:CDS 40.0%
CGATGAATATTCTATCGGAG+TGG + chr1_1:67920637-67920656 Msa0038440:CDS 40.0%
TGAATATTCTATCGGAGTGG+AGG + chr1_1:67920640-67920659 Msa0038440:CDS 40.0%
GGGAAATCGAAAAAAAGTGG+TGG + chr1_1:67920833-67920852 Msa0038440:CDS 40.0%
AGTGTGTTTGCTTCTGGATT+TGG + chr1_1:67920872-67920891 Msa0038440:CDS 40.0%
! TGATGATGAAGAGAAATCGG+AGG + chr1_1:67920925-67920944 Msa0038440:CDS 40.0%
!! AACCGGTTGTTAGCTTTACA+GGG + chr1_1:67920978-67920997 Msa0038440:CDS 40.0%
TTCCCTGTAAAGCTAACAAC+CGG - chr1_1:67920983-67921002 None:intergenic 40.0%
!! TGAGAATGATGATGGAGAAG+AGG + chr1_1:67921060-67921079 Msa0038440:CDS 40.0%
GATGAACCAATCACTTTCTC+GGG + chr1_1:67921115-67921134 Msa0038440:CDS 40.0%
TTCTTACCCGAGAAAGTGAT+TGG - chr1_1:67921124-67921143 None:intergenic 40.0%
ATTGAGTAAAGCTATTCCGG+AGG + chr1_1:67921183-67921202 Msa0038440:CDS 40.0%
TCTGTATCTGAGTCTGCTAA+AGG + chr1_1:67921217-67921236 Msa0038440:CDS 40.0%
! TGGTGATGATGAGAAAGATG+AGG + chr1_1:67921240-67921259 Msa0038440:CDS 40.0%
CTCGATTTCATCACTCACTT+TGG - chr1_1:67921332-67921351 None:intergenic 40.0%
GTGAGTGATGAAATCGAGTT+TGG + chr1_1:67921334-67921353 Msa0038440:CDS 40.0%
AGAATAAGAAGAAGAGTGGG+AGG + chr1_1:67921458-67921477 Msa0038440:CDS 40.0%
TGAACTTTATCATCCTGCTG+AGG - chr1_1:67921568-67921587 None:intergenic 40.0%
!! AGAAAGTGCCAAAGCATGTT+AGG + chr1_1:67921818-67921837 Msa0038440:CDS 40.0%
!! GAAAGTGCCAAAGCATGTTA+GGG + chr1_1:67921819-67921838 Msa0038440:CDS 40.0%
! ACTACTGGCTAGAAGAAAAG+AGG + chr1_1:67921852-67921871 Msa0038440:CDS 40.0%
GAAGCAAAGGAAAGAAGAAG+AGG + chr1_1:67921906-67921925 Msa0038440:CDS 40.0%
AGAGGCTAAACGTAGAAAGA+AGG + chr1_1:67921966-67921985 Msa0038440:CDS 40.0%
GAAACTCCTGAAAAAGAAGC+AGG + chr1_1:67922002-67922021 Msa0038440:CDS 40.0%
! TACCTTCCTGCTTCTTTTTC+AGG - chr1_1:67922011-67922030 None:intergenic 40.0%
AGATTCAGAGGAACCTGAAA+AGG + chr1_1:67922260-67922279 Msa0038440:CDS 40.0%
ACCTGAAAAGGTTGAAGAAG+TGG + chr1_1:67922272-67922291 Msa0038440:CDS 40.0%
! TCCACTTCTTCAACCTTTTC+AGG - chr1_1:67922276-67922295 None:intergenic 40.0%
AAAGGTTGAAGAAGTGGAGA+TGG + chr1_1:67922278-67922297 Msa0038440:CDS 40.0%
! GGATGAAGATGATGATGTTG+AGG + chr1_1:67922341-67922360 Msa0038440:CDS 40.0%
ATGAATGGGATGCAAAAAGC+TGG + chr1_1:67922364-67922383 Msa0038440:CDS 40.0%
TGAATGGGATGCAAAAAGCT+GGG + chr1_1:67922365-67922384 Msa0038440:CDS 40.0%
! TTTGACAATTGGTTCAGGCT+CGG - chr1_1:67922442-67922461 None:intergenic 40.0%
! GGCATACCTTCTAAAAATGC+TGG + chr1_1:67922477-67922496 Msa0038440:CDS 40.0%
!! TTTTGGGTCCTATTGCTTCT+TGG + chr1_1:67922594-67922613 Msa0038440:intron 40.0%
! TTTTCGTACCTCACTAGCAT+AGG + chr1_1:67922619-67922638 Msa0038440:intron 40.0%
AAACCAATTGCTGCAGTCAA+AGG - chr1_1:67922843-67922862 None:intergenic 40.0%
! CCTATGCTTATCTGAAGCAA+AGG - chr1_1:67922936-67922955 None:intergenic 40.0%
CCTTTGCTTCAGATAAGCAT+AGG + chr1_1:67922933-67922952 Msa0038440:intron 40.0%
TAGATCTCCCTGTATCTTGT+AGG + chr1_1:67922997-67923016 Msa0038440:intron 40.0%
!!! TTTGCTTTTTCTTCCACAGC+AGG + chr1_1:67923188-67923207 Msa0038440:intron 40.0%
TTTATTTGTAGCACCTGCTG+TGG - chr1_1:67923204-67923223 None:intergenic 40.0%
TAGAAAACAGGCCAAAGTTG+TGG + chr1_1:67923259-67923278 Msa0038440:CDS 40.0%
TACCAATGTTCAAGAAGGTG+AGG + chr1_1:67923424-67923443 Msa0038440:CDS 40.0%
GAACATACGTGAAAGAACCA+AGG + chr1_1:67923493-67923512 Msa0038440:CDS 40.0%
GTATCAATAACCAGTAGACC+GGG - chr1_1:67923548-67923567 None:intergenic 40.0%
GGTATCAATAACCAGTAGAC+CGG - chr1_1:67923549-67923568 None:intergenic 40.0%
TATTGAATGACTCGTGTCCT+GGG - chr1_1:67923571-67923590 None:intergenic 40.0%
TTATTGAATGACTCGTGTCC+TGG - chr1_1:67923572-67923591 None:intergenic 40.0%
TTCAATAACTTGAGGTCTCG+GGG + chr1_1:67923584-67923603 Msa0038440:CDS 40.0%
CTAGATTGTCACTCAGTTCA+AGG + chr1_1:67924011-67924030 Msa0038440:intron 40.0%
TCACTCAGTTCAAGGAACAA+GGG + chr1_1:67924019-67924038 Msa0038440:CDS 40.0%
TTGTGCCTACAAGTGCAATA+AGG + chr1_1:67924094-67924113 Msa0038440:CDS 40.0%
!! ATCAATATGGTGGTTGGTAG+GGG - chr1_1:67924200-67924219 None:intergenic 40.0%
! CATCAATATGGTGGTTGGTA+GGG - chr1_1:67924201-67924220 None:intergenic 40.0%
ACATCAATATGGTGGTTGGT+AGG - chr1_1:67924202-67924221 None:intergenic 40.0%
TGGAACATCAATATGGTGGT+TGG - chr1_1:67924206-67924225 None:intergenic 40.0%
! CATCTGGAACATCAATATGG+TGG - chr1_1:67924210-67924229 None:intergenic 40.0%
CACCATATTGATGTTCCAGA+TGG + chr1_1:67924208-67924227 Msa0038440:intron 40.0%
! TCCCATCTGGAACATCAATA+TGG - chr1_1:67924213-67924232 None:intergenic 40.0%
GGAAAACAAAATCTCCCATC+TGG - chr1_1:67924226-67924245 None:intergenic 40.0%
AAAGCTGTGGATTTGAGTCT+TGG - chr1_1:67924254-67924273 None:intergenic 40.0%
! TCTTTTGTAGTGCCAATGCT+AGG + chr1_1:67924323-67924342 Msa0038440:intron 40.0%
!! CAGAACATCTCAGCTTTGTT+TGG + chr1_1:67924562-67924581 Msa0038440:intron 40.0%
CTCTACGTGAAATCATCCAA+AGG + chr1_1:67924616-67924635 Msa0038440:intron 40.0%
TGATAATTTGGTAGGAGCAG+AGG + chr1_1:67924640-67924659 Msa0038440:intron 40.0%
TTCGCTGTATGTAAGCTTCT+CGG - chr1_1:67924837-67924856 None:intergenic 40.0%
ACCACTTCAACATCAAGTGA+TGG - chr1_1:67924874-67924893 None:intergenic 40.0%
GGGGATCAAATAGTTGTATC+TGG + chr1_1:67925043-67925062 Msa0038440:CDS 40.0%
GCTCGAATTGTGGTAACAAT+TGG - chr1_1:67925153-67925172 None:intergenic 40.0%
ATTGACACCTCATCCAATGA+AGG + chr1_1:67925176-67925195 Msa0038440:CDS 40.0%
!!! GGTGGTCATTTTTCCATCAT+TGG + chr1_1:67925414-67925433 Msa0038440:intron 40.0%
GAATATGTCAATTGAGGGGA+TGG + chr1_1:67925443-67925462 Msa0038440:intron 40.0%
GAAACATCCTCTTTAGTCTG+AGG + chr1_1:67925466-67925485 Msa0038440:intron 40.0%
AACATCCTCTTTAGTCTGAG+GGG + chr1_1:67925468-67925487 Msa0038440:intron 40.0%
! TGCTGGAGCTAGTTTATATG+TGG + chr1_1:67925755-67925774 Msa0038440:CDS 40.0%
! GGTAAAGCCTGATGATGATT+TGG + chr1_1:67925776-67925795 Msa0038440:CDS 40.0%
TAATGCTTCCAATGAGCCAA+GGG - chr1_1:67925892-67925911 None:intergenic 40.0%
ATAATGCTTCCAATGAGCCA+AGG - chr1_1:67925893-67925912 None:intergenic 40.0%
!! TGGCTCATTGGAAGCATTAT+TGG + chr1_1:67925893-67925912 Msa0038440:CDS 40.0%
TAGGGATCTTGCAGAAGAAT+TGG + chr1_1:67926070-67926089 Msa0038440:CDS 40.0%
AGGGATCTTGCAGAAGAATT+GGG + chr1_1:67926071-67926090 Msa0038440:CDS 40.0%
GGCTTACATGGACAACATTA+AGG + chr1_1:67926145-67926164 Msa0038440:CDS 40.0%
AAAGAAAGAATCTGCGGATG+AGG + chr1_1:67926175-67926194 Msa0038440:CDS 40.0%
GGTAAGATCTTCAGAACACA+TGG - chr1_1:67926209-67926228 None:intergenic 40.0%
! CAAGAAGGATCCGATTGTTT+TGG + chr1_1:67926244-67926263 Msa0038440:CDS 40.0%
!! TTGGGAGTTGATATCCTTGA+AGG + chr1_1:67926263-67926282 Msa0038440:CDS 40.0%
AGCAGCCTAAACTTATCCAT+AGG - chr1_1:67926476-67926495 None:intergenic 40.0%
TCTTGGGAAGGGATACAAAT+TGG - chr1_1:67926714-67926733 None:intergenic 40.0%
! TCGCATAATCAACCGGTTTA+TGG - chr1_1:67926776-67926795 None:intergenic 40.0%
CCTTTCTTCGCATAATCAAC+CGG - chr1_1:67926783-67926802 None:intergenic 40.0%
CGGTTGATTATGCGAAGAAA+GGG + chr1_1:67926781-67926800 Msa0038440:CDS 40.0%
GTACTATGATTGAGCGATGT+TGG + chr1_1:67926927-67926946 Msa0038440:intron 40.0%
ATGATTGAGCGATGTTGGAA+AGG + chr1_1:67926932-67926951 Msa0038440:intron 40.0%
AGGTGGTCTATCTTTAGACT+TGG + chr1_1:67927060-67927079 Msa0038440:intron 40.0%
CAACTTCGTTTGCAGATTGT+TGG + chr1_1:67927142-67927161 Msa0038440:intron 40.0%
TAAGCATGGTGAACAGTCAT+TGG - chr1_1:67927384-67927403 None:intergenic 40.0%
GACTGTTCACCATGCTTATA+CGG + chr1_1:67927386-67927405 Msa0038440:intron 40.0%
GTACTGTTACCGTATAAGCA+TGG - chr1_1:67927398-67927417 None:intergenic 40.0%
AAGTACATGGATTCCGAAAG+TGG + chr1_1:67927655-67927674 Msa0038440:intron 40.0%
GGTTAATGAAGTCGCGAAAT+TGG + chr1_1:67927699-67927718 Msa0038440:intron 40.0%
!!! GGTGAACAGTACCCTTTTTT+GGG - chr1_1:67927801-67927820 None:intergenic 40.0%
GACATAGGATGATCTGACTA+TGG + chr1_1:67927937-67927956 Msa0038440:intron 40.0%
ATAGGATGATCTGACTATGG+AGG + chr1_1:67927940-67927959 Msa0038440:intron 40.0%
ATGATCTGACTATGGAGGAA+TGG + chr1_1:67927945-67927964 Msa0038440:CDS 40.0%
CACAAAAATCCCTCAAAGTC+CGG - chr1_1:67928090-67928109 None:intergenic 40.0%
!! GACTTTGAGGGATTTTTGTG+AGG + chr1_1:67928090-67928109 Msa0038440:three_prime_UTR 40.0%
! ATTTTTGTGAGGATGCGGTT+GGG + chr1_1:67928101-67928120 Msa0038440:three_prime_UTR 40.0%
TCTGCATCATTGCATCTACA+AGG - chr1_1:67928131-67928150 None:intergenic 40.0%
GATGCAATGATGCAGATAGA+AGG + chr1_1:67928135-67928154 Msa0038440:three_prime_UTR 40.0%
GTTTCTTGTACAAGTCACTC+TGG - chr1_1:67928173-67928192 None:intergenic 40.0%
! ATCCTTGACAGTTACCCTTT+TGG - chr1_1:67928226-67928245 None:intergenic 40.0%
TGCTTTCTCTCATCGAACAA+AGG - chr1_1:67928319-67928338 None:intergenic 40.0%
! GTGTTCCATGCTTTGCATTT+TGG + chr1_1:67928417-67928436 Msa0038440:three_prime_UTR 40.0%
!!! TGCATTTTGGTTTTGGGAAC+GGG + chr1_1:67928430-67928449 Msa0038440:three_prime_UTR 40.0%
CATAGGTATGCATGCTTGTT+TGG + chr1_1:67928453-67928472 Msa0038440:three_prime_UTR 40.0%
! GTTGCTTTGCTTTGCCTCTA+GGG - chr1_1:67920289-67920308 None:intergenic 45.0%
! AGTTGCTTTGCTTTGCCTCT+AGG - chr1_1:67920290-67920309 None:intergenic 45.0%
AGAGGCAAAGCAAAGCAACT+TGG + chr1_1:67920290-67920309 Msa0038440:five_prime_UTR 45.0%
ACGAAAATTGCTTTGTGCGG+CGG - chr1_1:67920405-67920424 None:intergenic 45.0%
ATATTCTATCGGAGTGGAGG+AGG + chr1_1:67920643-67920662 Msa0038440:CDS 45.0%
GAGAAACCCGGGAAAAAGAA+AGG + chr1_1:67920698-67920717 Msa0038440:CDS 45.0%
!! AAAAGTGGTGGTGGTAGTAG+TGG + chr1_1:67920845-67920864 Msa0038440:CDS 45.0%
!! ATTTGGTGTGCTTGGTGATG+AGG + chr1_1:67920889-67920908 Msa0038440:CDS 45.0%
GAAGAGAAATCGGAGGTAAC+CGG + chr1_1:67920932-67920951 Msa0038440:CDS 45.0%
!! GAACCGGTTGTTAGCTTTAC+AGG + chr1_1:67920977-67920996 Msa0038440:CDS 45.0%
AGGGAAGAAGAAATCCTCGA+AGG + chr1_1:67920997-67921016 Msa0038440:CDS 45.0%
GGGAAGAAGAAATCCTCGAA+GGG + chr1_1:67920998-67921017 Msa0038440:CDS 45.0%
GTCATCAAAGGGTTCGAAGA+AGG + chr1_1:67921150-67921169 Msa0038440:CDS 45.0%
ACAGAAACACTATCCTCCTC+CGG - chr1_1:67921202-67921221 None:intergenic 45.0%
GTATCTGAGTCTGCTAAAGG+TGG + chr1_1:67921220-67921239 Msa0038440:CDS 45.0%
!! GAGAAGCCTAGTGTTGACAA+TGG + chr1_1:67921385-67921404 Msa0038440:CDS 45.0%
AGTAAGAGTGAAGAGGTCGT+TGG + chr1_1:67921415-67921434 Msa0038440:CDS 45.0%
ACTTTATCATCCTGCTGAGG+AGG - chr1_1:67921565-67921584 None:intergenic 45.0%
GCAGGATGATAAAGTTCAGC+CGG + chr1_1:67921570-67921589 Msa0038440:CDS 45.0%
AGAAAAGGAGAAGAAGGCAG+CGG + chr1_1:67921696-67921715 Msa0038440:CDS 45.0%
AGCTGTAGAAGAGAAAGCTG+AGG + chr1_1:67921750-67921769 Msa0038440:CDS 45.0%
TGCATCTCCCTAACATGCTT+TGG - chr1_1:67921829-67921848 None:intergenic 45.0%
TAGGGAGATGCAAGAACTAC+TGG + chr1_1:67921837-67921856 Msa0038440:CDS 45.0%
AGGAAGAGGAAGAGAAGCAA+AGG + chr1_1:67921893-67921912 Msa0038440:CDS 45.0%
GATAGAGGAACTTGAGAGAC+AGG + chr1_1:67921939-67921958 Msa0038440:CDS 45.0%
CTCCTGAAAAAGAAGCAGGA+AGG + chr1_1:67922006-67922025 Msa0038440:CDS 45.0%
GTAAGCAGAAAGAAGAAGCC+CGG + chr1_1:67922043-67922062 Msa0038440:CDS 45.0%
AGGCAGATTCTCAATAGCAC+AGG + chr1_1:67922084-67922103 Msa0038440:CDS 45.0%
GGCAGATTCTCAATAGCACA+GGG + chr1_1:67922085-67922104 Msa0038440:CDS 45.0%
GCAGATTCTCAATAGCACAG+GGG + chr1_1:67922086-67922105 Msa0038440:CDS 45.0%
CAGATTCTCAATAGCACAGG+GGG + chr1_1:67922087-67922106 Msa0038440:CDS 45.0%
TTCATCTGTCTTGACAGCAG+CGG - chr1_1:67922208-67922227 None:intergenic 45.0%
TTGCAGCCGGTGACATTATT+AGG - chr1_1:67922786-67922805 None:intergenic 45.0%
GCTGCAGTCAAAGGAAGAAA+GGG - chr1_1:67922834-67922853 None:intergenic 45.0%
TGCTGCAGTCAAAGGAAGAA+AGG - chr1_1:67922835-67922854 None:intergenic 45.0%
CTTCCTTTGACTGCAGCAAT+TGG + chr1_1:67922837-67922856 Msa0038440:intron 45.0%
! GCAGCAATTGGTTTCAAACC+TGG + chr1_1:67922849-67922868 Msa0038440:intron 45.0%
CAGGGAGATCTAATACTTGG+TGG - chr1_1:67922989-67923008 None:intergenic 45.0%
GTTGGATGGGGCATGATATT+TGG + chr1_1:67923094-67923113 Msa0038440:intron 45.0%
TCTTCAGTTTCTTCAGCTGC+AGG - chr1_1:67923239-67923258 None:intergenic 45.0%
!! TCGCCAATTTGCTGCATCAT+GGG + chr1_1:67923356-67923375 Msa0038440:CDS 45.0%
TGACCCATGATGCAGCAAAT+TGG - chr1_1:67923362-67923381 None:intergenic 45.0%
TCGAATGCAATCCAGAAGCT+TGG - chr1_1:67923402-67923421 None:intergenic 45.0%
AAGCTTCTGGATTGCATTCG+AGG + chr1_1:67923401-67923420 Msa0038440:CDS 45.0%
! CGAGGTACCAATGTTCAAGA+AGG + chr1_1:67923419-67923438 Msa0038440:CDS 45.0%
AGCCTCACCTTCTTGAACAT+TGG - chr1_1:67923429-67923448 None:intergenic 45.0%
AATGTTCAAGAAGGTGAGGC+TGG + chr1_1:67923428-67923447 Msa0038440:CDS 45.0%
ATGTTCAAGAAGGTGAGGCT+GGG + chr1_1:67923429-67923448 Msa0038440:CDS 45.0%
GTACGTTGCACCAATCTGTT+GGG - chr1_1:67923462-67923481 None:intergenic 45.0%
AGTACGTTGCACCAATCTGT+TGG - chr1_1:67923463-67923482 None:intergenic 45.0%
CTTTCACGTATGTTCTCAGC+AGG - chr1_1:67923488-67923507 None:intergenic 45.0%
TGCATCAGCTTTCAGTTCCT+TGG - chr1_1:67923513-67923532 None:intergenic 45.0%
GATGCAACACTGAAAGTTCC+CGG + chr1_1:67923527-67923546 Msa0038440:CDS 45.0%
! CTACTGGTTATTGATACCCC+AGG + chr1_1:67923551-67923570 Msa0038440:CDS 45.0%
ATTGAATGACTCGTGTCCTG+GGG - chr1_1:67923570-67923589 None:intergenic 45.0%
TTGGTCGTGGACATTATGCA+TGG + chr1_1:67923632-67923651 Msa0038440:CDS 45.0%
! TTGCAGGTTGACAGGCTTTA+TGG + chr1_1:67923810-67923829 Msa0038440:intron 45.0%
AGCAATGACACAGCAGTCTA+AGG + chr1_1:67923866-67923885 Msa0038440:CDS 45.0%
GTTCAATATGAGGGTCACTC+AGG + chr1_1:67923902-67923921 Msa0038440:CDS 45.0%
GTCACTCAGTTCAAGGAACA+AGG + chr1_1:67924018-67924037 Msa0038440:CDS 45.0%
TTGGTAGGGGTAAAATGGAG+GGG - chr1_1:67924187-67924206 None:intergenic 45.0%
! GTTGGTAGGGGTAAAATGGA+GGG - chr1_1:67924188-67924207 None:intergenic 45.0%
TGGATTTGAGTCTTGGATGC+AGG - chr1_1:67924247-67924266 None:intergenic 45.0%
TTTCAGTGGTGAAGGAATCC+CGG + chr1_1:67924769-67924788 Msa0038440:intron 45.0%
! CTTCTCGGTCATGGTCTTTT+GGG - chr1_1:67924822-67924841 None:intergenic 45.0%
GTATGTAAGCTTCTCGGTCA+TGG - chr1_1:67924831-67924850 None:intergenic 45.0%
! TACATACAGCGAAGAAGTGC+AGG + chr1_1:67924844-67924863 Msa0038440:CDS 45.0%
GCCATCACTTGATGTTGAAG+TGG + chr1_1:67924870-67924889 Msa0038440:intron 45.0%
TGACTTCCAAAACGGTACAC+TGG - chr1_1:67924961-67924980 None:intergenic 45.0%
!!! GTGTACCGTTTTGGAAGTCA+AGG + chr1_1:67924961-67924980 Msa0038440:intron 45.0%
GTCAAGGTTATTGAAGGCCA+TGG + chr1_1:67924977-67924996 Msa0038440:CDS 45.0%
CGAAGTTCCTTCATTGGATG+AGG - chr1_1:67925186-67925205 None:intergenic 45.0%
!! AGCTGGTTTGGGTAGGAAAA+AGG + chr1_1:67925248-67925267 Msa0038440:intron 45.0%
!! GCTGGTTTGGGTAGGAAAAA+GGG + chr1_1:67925249-67925268 Msa0038440:intron 45.0%
TGGATAAGTTTAGGCTGCTG+CGG + chr1_1:67926477-67926496 Msa0038440:intron 45.0%
CCGGTTGATTATGCGAAGAA+AGG + chr1_1:67926780-67926799 Msa0038440:CDS 45.0%
AGGGCAGAAAGTAGCCATTA+AGG + chr1_1:67926800-67926819 Msa0038440:CDS 45.0%
AACAGCAGAAAATGTTCGGG+AGG + chr1_1:67927179-67927198 Msa0038440:CDS 45.0%
! TGTACGCTGTTGACCACTTT+TGG + chr1_1:67927542-67927561 Msa0038440:intron 45.0%
!!! CGGTGAACAGTACCCTTTTT+TGG - chr1_1:67927802-67927821 None:intergenic 45.0%
! GGGTACTGTTCACCGTATAA+AGG + chr1_1:67927807-67927826 Msa0038440:intron 45.0%
CTGTTCACCGTATAAAGGTG+TGG + chr1_1:67927812-67927831 Msa0038440:intron 45.0%
GGTATAATGCCGGACTTTGA+GGG + chr1_1:67928078-67928097 Msa0038440:three_prime_UTR 45.0%
! GAGGGATTTTTGTGAGGATG+CGG + chr1_1:67928096-67928115 Msa0038440:three_prime_UTR 45.0%
! GATTTTTGTGAGGATGCGGT+TGG + chr1_1:67928100-67928119 Msa0038440:three_prime_UTR 45.0%
AGGGTAACTGTCAAGGATGA+AGG + chr1_1:67928228-67928247 Msa0038440:three_prime_UTR 45.0%
!! GATTTTCCACCGCCTTGTTG+CGG - chr1_1:67920590-67920609 None:intergenic 50.0%
! GGTGGAAGTGTGTTTGCTTC+TGG + chr1_1:67920866-67920885 Msa0038440:CDS 50.0%
!! GCTTCTGGATTTGGTGTGCT+TGG + chr1_1:67920881-67920900 Msa0038440:CDS 50.0%
AAATCGGAGGTAACCGGTGA+GGG + chr1_1:67920938-67920957 Msa0038440:CDS 50.0%
CGATGACGATGAGGATGAAC+CGG + chr1_1:67920961-67920980 Msa0038440:CDS 50.0%
TCCTCGAAGGGTTCGAAGAA+AGG + chr1_1:67921010-67921029 Msa0038440:CDS 50.0%
CCTCGAAGGGTTCGAAGAAA+GGG + chr1_1:67921011-67921030 Msa0038440:CDS 50.0%
CTCGAAGGGTTCGAAGAAAG+GGG + chr1_1:67921012-67921031 Msa0038440:CDS 50.0%
TCGAAGGGTTCGAAGAAAGG+GGG + chr1_1:67921013-67921032 Msa0038440:CDS 50.0%
TCAAAGGGTTCGAAGAAGGC+AGG + chr1_1:67921154-67921173 Msa0038440:CDS 50.0%
GAGTAAAGCTATTCCGGAGG+AGG + chr1_1:67921186-67921205 Msa0038440:CDS 50.0%
GAGTGGGAGGACTAAAGAAG+AGG + chr1_1:67921471-67921490 Msa0038440:CDS 50.0%
TGGGAGGACTAAAGAAGAGG+AGG + chr1_1:67921474-67921493 Msa0038440:CDS 50.0%
GATAAGCTTCTCGCAGAGCT+TGG + chr1_1:67921505-67921524 Msa0038440:CDS 50.0%
GCAGAACCTACTACAGGAAC+CGG - chr1_1:67921592-67921611 None:intergenic 50.0%
!! CTTTTCTCCTGAAGCACCAG+GGG - chr1_1:67921614-67921633 None:intergenic 50.0%
!! CCTTTTCTCCTGAAGCACCA+GGG - chr1_1:67921615-67921634 None:intergenic 50.0%
!! TCCTTTTCTCCTGAAGCACC+AGG - chr1_1:67921616-67921635 None:intergenic 50.0%
TGGTGCTTCAGGAGAAAAGG+AGG + chr1_1:67921615-67921634 Msa0038440:CDS 50.0%
GGTGCTTCAGGAGAAAAGGA+GGG + chr1_1:67921616-67921635 Msa0038440:CDS 50.0%
CACTTTCTTGTCAGCCGCTT+TGG - chr1_1:67921806-67921825 None:intergenic 50.0%
AAGAAGAAGAGGAGCGACGA+AGG + chr1_1:67921917-67921936 Msa0038440:CDS 50.0%
ACTTGAGAGACAGGCAGAAG+AGG + chr1_1:67921948-67921967 Msa0038440:CDS 50.0%
GGTTGAAGAAGTGGAGATGG+AGG + chr1_1:67922281-67922300 Msa0038440:CDS 50.0%
ATCCAACTAGAGAAGGGGGT+TGG - chr1_1:67923081-67923100 None:intergenic 50.0%
AACCCCCTTCTCTAGTTGGA+TGG + chr1_1:67923080-67923099 Msa0038440:intron 50.0%
ACCCCCTTCTCTAGTTGGAT+GGG + chr1_1:67923081-67923100 Msa0038440:intron 50.0%
TGCCCCATCCAACTAGAGAA+GGG - chr1_1:67923087-67923106 None:intergenic 50.0%
ATGCCCCATCCAACTAGAGA+AGG - chr1_1:67923088-67923107 None:intergenic 50.0%
ACAGGCCAAAGTTGTGGTTG+AGG + chr1_1:67923265-67923284 Msa0038440:CDS 50.0%
TTCACTCGGCTTAGAAGGCA+CGG - chr1_1:67923324-67923343 None:intergenic 50.0%
TGCCTTCTAAGCCGAGTGAA+GGG + chr1_1:67923324-67923343 Msa0038440:CDS 50.0%
TTCCCTTCACTCGGCTTAGA+AGG - chr1_1:67923329-67923348 None:intergenic 50.0%
!! GTCGCCAATTTGCTGCATCA+TGG + chr1_1:67923355-67923374 Msa0038440:CDS 50.0%
TTGCTGCATCATGGGTCATG+TGG + chr1_1:67923364-67923383 Msa0038440:CDS 50.0%
ATCATGGGTCATGTGGACAC+TGG + chr1_1:67923371-67923390 Msa0038440:CDS 50.0%
CACTGGCAAAACCAAGCTTC+TGG + chr1_1:67923388-67923407 Msa0038440:CDS 50.0%
TGTTCAAGAAGGTGAGGCTG+GGG + chr1_1:67923430-67923449 Msa0038440:CDS 50.0%
ACTGAAAGTTCCCGGTCTAC+TGG + chr1_1:67923535-67923554 Msa0038440:CDS 50.0%
CACTGTTCTCGCAACATTGC+AGG + chr1_1:67923794-67923813 Msa0038440:intron 50.0%
! TCGCAACATTGCAGGTTGAC+AGG + chr1_1:67923802-67923821 Msa0038440:intron 50.0%
! AGGTTGACAGGCTTTATGGC+TGG + chr1_1:67923814-67923833 Msa0038440:intron 50.0%
!! GGTTGGTAGGGGTAAAATGG+AGG - chr1_1:67924189-67924208 None:intergenic 50.0%
!! GGTGGTTGGTAGGGGTAAAA+TGG - chr1_1:67924192-67924211 None:intergenic 50.0%
AAAACAACCCCAAGCCGTTG+AGG + chr1_1:67924285-67924304 Msa0038440:intron 50.0%
TGTAATCGCCTCAACGGCTT+GGG - chr1_1:67924296-67924315 None:intergenic 50.0%
ATGTAATCGCCTCAACGGCT+TGG - chr1_1:67924297-67924316 None:intergenic 50.0%
! GCTTCTCGGTCATGGTCTTT+TGG - chr1_1:67924823-67924842 None:intergenic 50.0%
! TGGCTACCAGTGTACCGTTT+TGG + chr1_1:67924952-67924971 Msa0038440:intron 50.0%
AAAGGCCCCTCAGACTAAAG+AGG - chr1_1:67925476-67925495 None:intergenic 50.0%
GGGCTTGAACATGCTATTGC+TGG + chr1_1:67925738-67925757 Msa0038440:CDS 50.0%
!! AAAGGCAGCTTTGGAAGACG+TGG + chr1_1:67925809-67925828 Msa0038440:CDS 50.0%
!! AGCTTTGGAAGACGTGGAGT+CGG + chr1_1:67925815-67925834 Msa0038440:CDS 50.0%
TTGAGCAGGATTGACAGGAG+TGG + chr1_1:67925840-67925859 Msa0038440:CDS 50.0%
AGGATTGACAGGAGTGGTGA+GGG + chr1_1:67925846-67925865 Msa0038440:CDS 50.0%
CATAGGCCCTGTACACAAGA+AGG + chr1_1:67925962-67925981 Msa0038440:CDS 50.0%
TCAAAGTCACCCCTGAAGCT+AGG + chr1_1:67926051-67926070 Msa0038440:CDS 50.0%
CAAAGTCACCCCTGAAGCTA+GGG + chr1_1:67926052-67926071 Msa0038440:CDS 50.0%
TGCAAGATCCCTAGCTTCAG+GGG - chr1_1:67926063-67926082 None:intergenic 50.0%
CTGCAAGATCCCTAGCTTCA+GGG - chr1_1:67926064-67926083 None:intergenic 50.0%
TCTGCAAGATCCCTAGCTTC+AGG - chr1_1:67926065-67926084 None:intergenic 50.0%
AGGCTGCTGCGGTTAAAATG+AGG + chr1_1:67926488-67926507 Msa0038440:intron 50.0%
GACTATGGAGGAATGGAAGC+TGG + chr1_1:67927952-67927971 Msa0038440:CDS 50.0%
TATGGAGGAATGGAAGCTGG+TGG + chr1_1:67927955-67927974 Msa0038440:CDS 50.0%
CGGTATAATGCCGGACTTTG+AGG + chr1_1:67928077-67928096 Msa0038440:three_prime_UTR 50.0%
ACTTCTATGCTCCTGCAGCT+TGG + chr1_1:67928191-67928210 Msa0038440:three_prime_UTR 50.0%
CTTGGATCCTCTGGCCAAAA+GGG + chr1_1:67928209-67928228 Msa0038440:three_prime_UTR 50.0%
! ACAGTTACCCTTTTGGCCAG+AGG - chr1_1:67928219-67928238 None:intergenic 50.0%
GGCCAAAAGGGTAACTGTCA+AGG + chr1_1:67928221-67928240 Msa0038440:three_prime_UTR 50.0%
!!! TTGGTTTTGGGAACGGGCAT+AGG + chr1_1:67928436-67928455 Msa0038440:three_prime_UTR 50.0%
TGCTTTGTGCGGCGGTGAAA+AGG - chr1_1:67920397-67920416 None:intergenic 55.0%
GGTTTCTCTTCCACCGCAAC+CGG - chr1_1:67920686-67920705 None:intergenic 55.0%
GTTGCGGTGGAAGAGAAACC+CGG + chr1_1:67920686-67920705 Msa0038440:CDS 55.0%
TTGCGGTGGAAGAGAAACCC+GGG + chr1_1:67920687-67920706 Msa0038440:CDS 55.0%
!! AGTGGTGGTGGTAGTAGTGG+TGG + chr1_1:67920848-67920867 Msa0038440:CDS 55.0%
GAAATCGGAGGTAACCGGTG+AGG + chr1_1:67920937-67920956 Msa0038440:CDS 55.0%
CCCTTTCTTCGAACCCTTCG+AGG - chr1_1:67921014-67921033 None:intergenic 55.0%
AAGGGTTCGAAGAAGGCAGG+TGG + chr1_1:67921157-67921176 Msa0038440:CDS 55.0%
AGCAGGTTGTGCTGTAGCAG+GGG - chr1_1:67921536-67921555 None:intergenic 55.0%
CAGCAGGTTGTGCTGTAGCA+GGG - chr1_1:67921537-67921556 None:intergenic 55.0%
TGCTACAGCACAACCTGCTG+CGG + chr1_1:67921537-67921556 Msa0038440:CDS 55.0%
! GTTCAGCCGGTTCCTGTAGT+AGG + chr1_1:67921583-67921602 Msa0038440:CDS 55.0%
CCCTGGTGCTTCAGGAGAAA+AGG + chr1_1:67921612-67921631 Msa0038440:CDS 55.0%
AGAGGAGCGACGAAGGATAG+AGG + chr1_1:67921924-67921943 Msa0038440:CDS 55.0%
GAAAGAAGAAGCCCGGCGTT+TGG + chr1_1:67922050-67922069 Msa0038440:CDS 55.0%
TCCTCATTGCCTCCAAACGC+CGG - chr1_1:67922065-67922084 None:intergenic 55.0%
CTCCCTGTATCTTGTAGGCG+TGG + chr1_1:67923002-67923021 Msa0038440:intron 55.0%
GGCCACGCCTACAAGATACA+GGG - chr1_1:67923007-67923026 None:intergenic 55.0%
TGGCCACGCCTACAAGATAC+AGG - chr1_1:67923008-67923027 None:intergenic 55.0%
AGCCAACCCCCTTCTCTAGT+TGG + chr1_1:67923076-67923095 Msa0038440:intron 55.0%
CCCCATCCAACTAGAGAAGG+GGG - chr1_1:67923085-67923104 None:intergenic 55.0%
CCCCCTTCTCTAGTTGGATG+GGG + chr1_1:67923082-67923101 Msa0038440:intron 55.0%
GCCCCATCCAACTAGAGAAG+GGG - chr1_1:67923086-67923105 None:intergenic 55.0%
TCAGCTGCAGGCTTCGTAAC+AGG - chr1_1:67923227-67923246 None:intergenic 55.0%
GTGCCTTCTAAGCCGAGTGA+AGG + chr1_1:67923323-67923342 Msa0038440:CDS 55.0%
AGCCGAGTGAAGGGAACCTT+CGG + chr1_1:67923333-67923352 Msa0038440:CDS 55.0%
GACCGAAGGTTCCCTTCACT+CGG - chr1_1:67923338-67923357 None:intergenic 55.0%
TGCAGCAAATTGGCGACCGA+AGG - chr1_1:67923352-67923371 None:intergenic 55.0%
GTTCAAGAAGGTGAGGCTGG+GGG + chr1_1:67923431-67923450 Msa0038440:CDS 55.0%
!! GGGGGTATCACCCAACAGAT+TGG + chr1_1:67923449-67923468 Msa0038440:CDS 55.0%
AACTTGAGGTCTCGGGGTTC+AGG + chr1_1:67923590-67923609 Msa0038440:CDS 55.0%
GTAATCGCCTCAACGGCTTG+GGG - chr1_1:67924295-67924314 None:intergenic 55.0%
GTCTGAGGGGCCTTTAACAG+AGG + chr1_1:67925481-67925500 Msa0038440:intron 55.0%
GGGAATCAAGATCACTGCCC+AGG + chr1_1:67925599-67925618 Msa0038440:CDS 55.0%
CGGTCTTGAGCAGGATTGAC+AGG + chr1_1:67925835-67925854 Msa0038440:CDS 55.0%
CAGGATTGACAGGAGTGGTG+AGG + chr1_1:67925845-67925864 Msa0038440:CDS 55.0%
TGTGTCCAGGCATCTACCCT+TGG + chr1_1:67925873-67925892 Msa0038440:CDS 55.0%
ATGAGCCAAGGGTAGATGCC+TGG - chr1_1:67925881-67925900 None:intergenic 55.0%
GGCATCTACCCTTGGCTCAT+TGG + chr1_1:67925881-67925900 Msa0038440:CDS 55.0%
GCTTGGATCCTCTGGCCAAA+AGG + chr1_1:67928208-67928227 Msa0038440:three_prime_UTR 55.0%
CGTCTGTGTAGTGTGAGAGC+TGG + chr1_1:67928536-67928555 Msa0038440:three_prime_UTR 55.0%
! TTCTCGTCGTCGCGGATTGC+TGG - chr1_1:67920560-67920579 None:intergenic 60.0%
GAGAATCCTCCGCCGCAACA+AGG + chr1_1:67920575-67920594 Msa0038440:CDS 60.0%
AATCCTCCGCCGCAACAAGG+CGG + chr1_1:67920578-67920597 Msa0038440:CDS 60.0%
! TTTCCACCGCCTTGTTGCGG+CGG - chr1_1:67920587-67920606 None:intergenic 60.0%
!! GGAGGAGGTGTCAGAGGATG+CGG + chr1_1:67920658-67920677 Msa0038440:CDS 60.0%
CTCATCGTCATCGCCCTCAC+CGG - chr1_1:67920954-67920973 None:intergenic 60.0%
GCAGCAGGTTGTGCTGTAGC+AGG - chr1_1:67921538-67921557 None:intergenic 60.0%
CCAGGGGCAGAACCTACTAC+AGG - chr1_1:67921598-67921617 None:intergenic 60.0%
CCTGTAGTAGGTTCTGCCCC+TGG + chr1_1:67921595-67921614 Msa0038440:CDS 60.0%
! AGCAGCAGCTGGAAGTGCAC+CGG + chr1_1:67921720-67921739 Msa0038440:CDS 60.0%
AGAAGAAGCCCGGCGTTTGG+AGG + chr1_1:67922053-67922072 Msa0038440:CDS 60.0%
CCTCATTGCCTCCAAACGCC+GGG - chr1_1:67922064-67922083 None:intergenic 60.0%
GGCGTTTGGAGGCAATGAGG+AGG + chr1_1:67922064-67922083 Msa0038440:CDS 60.0%
! ACAGGGGGCATGACTCTTCC+TGG + chr1_1:67922102-67922121 Msa0038440:CDS 60.0%
! GAAGGCACGGCAGACAGTTG+TGG - chr1_1:67923311-67923330 None:intergenic 60.0%
ACGTGGAGTCGGTCTTGAGC+AGG + chr1_1:67925826-67925845 Msa0038440:CDS 60.0%
!! TGGTGAGGGCGTTTGTGTCC+AGG + chr1_1:67925860-67925879 Msa0038440:CDS 60.0%
CTCCTGCAGCTTGGATCCTC+TGG + chr1_1:67928200-67928219 Msa0038440:three_prime_UTR 60.0%
GCGGAGGATTCTCGTCGTCG+CGG - chr1_1:67920568-67920587 None:intergenic 65.0%
!! CGGAGTGGAGGAGGTGTCAG+AGG + chr1_1:67920652-67920671 Msa0038440:CDS 65.0%
GGTGTCAGAGGATGCGGCTC+CGG + chr1_1:67920664-67920683 Msa0038440:CDS 65.0%
AGAGGATGCGGCTCCGGTTG+CGG + chr1_1:67920670-67920689 Msa0038440:CDS 65.0%
CGGTGAGGGCGATGACGATG+AGG + chr1_1:67920952-67920971 Msa0038440:CDS 65.0%
GGTTCTGCCCCTGGTGCTTC+AGG + chr1_1:67921604-67921623 Msa0038440:CDS 65.0%
CCCGGCGTTTGGAGGCAATG+AGG + chr1_1:67922061-67922080 Msa0038440:CDS 65.0%
GGGCATGACTCTTCCTGGCG+CGG + chr1_1:67922107-67922126 Msa0038440:CDS 65.0%
ACTCTTCCTGGCGCGGACAC+TGG + chr1_1:67922114-67922133 Msa0038440:CDS 65.0%
GGCCAGAGGATCCAAGCTGC+AGG - chr1_1:67928205-67928224 None:intergenic 65.0%
TGCTGAGGAGGAGCCGCAGC+AGG - chr1_1:67921553-67921572 None:intergenic 70.0%
TGCTGCGGCTCCTCCTCAGC+AGG + chr1_1:67921552-67921571 Msa0038440:CDS 70.0%
AAGGCAGCGGCAGCAGCAGC+TGG + chr1_1:67921709-67921728 Msa0038440:CDS 70.0%
CTTCCTGGCGCGGACACTGG+TGG + chr1_1:67922117-67922136 Msa0038440:CDS 70.0%
!! GAGAAGGGGGTTGGCTCCGC+AGG - chr1_1:67923072-67923091 None:intergenic 70.0%
! CCACCGCCTTGTTGCGGCGG+AGG - chr1_1:67920584-67920603 None:intergenic 75.0%
CCTCCGCCGCAACAAGGCGG+TGG + chr1_1:67920581-67920600 Msa0038440:CDS 75.0%
GGATGCGGCTCCGGTTGCGG+TGG + chr1_1:67920673-67920692 Msa0038440:CDS 75.0%
GGTCCACCAGTGTCCGCGCC+AGG - chr1_1:67922123-67922142 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 67920282 67928649 67920282 ID=Msa0038440;Name=Msa0038440
chr1_1 mRNA 67920282 67928649 67920282 ID=Msa0038440-mRNA-1;Parent=Msa0038440;Name=Msa0038440-mRNA-1;_AED=0.06;_eAED=0.06;_QI=260|1|1|1|1|1|12|640|1293
chr1_1 exon 67920282 67922498 67920282 ID=Msa0038440-mRNA-1:exon:22051;Parent=Msa0038440-mRNA-1
chr1_1 exon 67923207 67923730 67923207 ID=Msa0038440-mRNA-1:exon:22052;Parent=Msa0038440-mRNA-1
chr1_1 exon 67923816 67923923 67923816 ID=Msa0038440-mRNA-1:exon:22053;Parent=Msa0038440-mRNA-1
chr1_1 exon 67924015 67924115 67924015 ID=Msa0038440-mRNA-1:exon:22054;Parent=Msa0038440-mRNA-1
chr1_1 exon 67924775 67924865 67924775 ID=Msa0038440-mRNA-1:exon:22055;Parent=Msa0038440-mRNA-1
chr1_1 exon 67924962 67925072 67924962 ID=Msa0038440-mRNA-1:exon:22056;Parent=Msa0038440-mRNA-1
chr1_1 exon 67925147 67925212 67925147 ID=Msa0038440-mRNA-1:exon:22057;Parent=Msa0038440-mRNA-1
chr1_1 exon 67925561 67925620 67925561 ID=Msa0038440-mRNA-1:exon:22058;Parent=Msa0038440-mRNA-1
chr1_1 exon 67925738 67926295 67925738 ID=Msa0038440-mRNA-1:exon:22059;Parent=Msa0038440-mRNA-1
chr1_1 exon 67926702 67926821 67926702 ID=Msa0038440-mRNA-1:exon:22060;Parent=Msa0038440-mRNA-1
chr1_1 exon 67927157 67927276 67927157 ID=Msa0038440-mRNA-1:exon:22061;Parent=Msa0038440-mRNA-1
chr1_1 exon 67927944 67928649 67927944 ID=Msa0038440-mRNA-1:exon:22062;Parent=Msa0038440-mRNA-1
chr1_1 five_prime_UTR 67920282 67920541 67920282 ID=Msa0038440-mRNA-1:five_prime_utr;Parent=Msa0038440-mRNA-1
chr1_1 CDS 67920542 67922498 67920542 ID=Msa0038440-mRNA-1:cds;Parent=Msa0038440-mRNA-1
chr1_1 CDS 67923207 67923730 67923207 ID=Msa0038440-mRNA-1:cds;Parent=Msa0038440-mRNA-1
chr1_1 CDS 67923816 67923923 67923816 ID=Msa0038440-mRNA-1:cds;Parent=Msa0038440-mRNA-1
chr1_1 CDS 67924015 67924115 67924015 ID=Msa0038440-mRNA-1:cds;Parent=Msa0038440-mRNA-1
chr1_1 CDS 67924775 67924865 67924775 ID=Msa0038440-mRNA-1:cds;Parent=Msa0038440-mRNA-1
chr1_1 CDS 67924962 67925072 67924962 ID=Msa0038440-mRNA-1:cds;Parent=Msa0038440-mRNA-1
chr1_1 CDS 67925147 67925212 67925147 ID=Msa0038440-mRNA-1:cds;Parent=Msa0038440-mRNA-1
chr1_1 CDS 67925561 67925620 67925561 ID=Msa0038440-mRNA-1:cds;Parent=Msa0038440-mRNA-1
chr1_1 CDS 67925738 67926295 67925738 ID=Msa0038440-mRNA-1:cds;Parent=Msa0038440-mRNA-1
chr1_1 CDS 67926702 67926821 67926702 ID=Msa0038440-mRNA-1:cds;Parent=Msa0038440-mRNA-1
chr1_1 CDS 67927157 67927276 67927157 ID=Msa0038440-mRNA-1:cds;Parent=Msa0038440-mRNA-1
chr1_1 CDS 67927944 67928009 67927944 ID=Msa0038440-mRNA-1:cds;Parent=Msa0038440-mRNA-1
chr1_1 three_prime_UTR 67928010 67928649 67928010 ID=Msa0038440-mRNA-1:three_prime_utr;Parent=Msa0038440-mRNA-1
Gene Sequence

>Msa0038440

ATGGGGAAGAAGAAGCCAGCAATCCGCGACGACGAGAATCCTCCGCCGCAACAAGGCGGTGGAAAATCAAAGAAGAAGGCTCCGGTTATCGATGACGATGAATATTCTATCGGAGTGGAGGAGGTGTCAGAGGATGCGGCTCCGGTTGCGGTGGAAGAGAAACCCGGGAAAAAGAAAGGTAAGAAAGGTAATGCTAAATCCAAAAAAGATAATGATGATGATGATTTTGATGATGCTGTTGTTGTTGATGATGATGATGTGAATGAAATTGTTTTTGCTGGGAAGAAAAAAGGGAAATCGAAAAAAAGTGGTGGTGGTAGTAGTGGTGGAAGTGTGTTTGCTTCTGGATTTGGTGTGCTTGGTGATGAGGACGATGTTGATAATGATGATGAAGAGAAATCGGAGGTAACCGGTGAGGGCGATGACGATGAGGATGAACCGGTTGTTAGCTTTACAGGGAAGAAGAAATCCTCGAAGGGTTCGAAGAAAGGGGGAAGTAGTTTGTTCAGTGCATTAGATGAGAATGATGATGGAGAAGAGGAGAGTAAGAATGAAAAGGTAGAAGACGATGATGATGAACCAATCACTTTCTCGGGTAAGAAAAAGAAGTCATCAAAGGGTTCGAAGAAGGCAGGTGGTTCATTGAGTAAAGCTATTCCGGAGGAGGATAGTGTTTCTGTATCTGAGTCTGCTAAAGGTGGTGATGATGAGAAAGATGAGGATGATGTTTCTTTTGCATTTACTGGTAAAAAGAAGTCTTCTAAAAAGAAAAGTGGTAGTGCTTCTGCCAAAGTGAGTGATGAAATCGAGTTTGGGAGTGAAAGTGTAAATGTTGTGGAGGCTGAGAAGCCTAGTGTTGACAATGGTAATATAAGTAAGAGTGAAGAGGTCGTTGGAACTTCCAAGAATAAGAAAAAGAATAAGAAGAAGAGTGGGAGGACTAAAGAAGAGGAGGATGATTTAGATAAGCTTCTCGCAGAGCTTGGCGAAGCCCCTGCTACAGCACAACCTGCTGCGGCTCCTCCTCAGCAGGATGATAAAGTTCAGCCGGTTCCTGTAGTAGGTTCTGCCCCTGGTGCTTCAGGAGAAAAGGAGGGAGAAGATGAGACTGTAGAGTCAGCTGCCGCAAAAAAGAAGAAAAAGAAGAAGGAAAAAGAAAAGGAGAAGAAGGCAGCGGCAGCAGCAGCTGGAAGTGCACCGGTAATTGAAGCTGTAGAAGAGAAAGCTGAGGCAATTGAACCGAAGAAAAATGATTCGAAGACCAAAGCGGCTGACAAGAAAGTGCCAAAGCATGTTAGGGAGATGCAAGAACTACTGGCTAGAAGAAAAGAGGCTGAAGAAAAAAAGAAAAAGGAAGAGGAAGAGAAGCAAAGGAAAGAAGAAGAGGAGCGACGAAGGATAGAGGAACTTGAGAGACAGGCAGAAGAGGCTAAACGTAGAAAGAAGGAAAAAGAAAAGGAGAAACTCCTGAAAAAGAAGCAGGAAGGTAAATTGTTAACTGGTAAGCAGAAAGAAGAAGCCCGGCGTTTGGAGGCAATGAGGAGGCAGATTCTCAATAGCACAGGGGGCATGACTCTTCCTGGCGCGGACACTGGTGGACCATCCAAAAAACCTATTTATCAGACAAAGAAAGGGAAAACAACGAATCGAAATCATAATGGTGCCGCTGCTGTCAAGACAGATGAAAGTGTTGAAGCAACGGAAACTACTGCTGATTTAGATTCAGAGGAACCTGAAAAGGTTGAAGAAGTGGAGATGGAGGACAAAGTTGAACTTCCTGAAGTTGTTGAAGAAGTAGTGGATGAAGATGATGATGTTGAGGATGAATGGGATGCAAAAAGCTGGGATGATGTCAATCTGAATGATAGGGGTGCATTTGCTGATGAAGAAGTTGACTCCGAGCCTGAACCAATTGTCAAAAAAGAGATTAAAAATGGCATACCTTCTAAAAATGCTGCAGGTGCTACAAATAAACCTGTTACGAAGCCTGCAGCTGAAGAAACTGAAGATAGAAAACAGGCCAAAGTTGTGGTTGAGGATAAAAAGAAAAGGCACGATCCACAACTGTCTGCCGTGCCTTCTAAGCCGAGTGAAGGGAACCTTCGGTCGCCAATTTGCTGCATCATGGGTCATGTGGACACTGGCAAAACCAAGCTTCTGGATTGCATTCGAGGTACCAATGTTCAAGAAGGTGAGGCTGGGGGTATCACCCAACAGATTGGTGCAACGTACTTTCCTGCTGAGAACATACGTGAAAGAACCAAGGAACTGAAAGCTGATGCAACACTGAAAGTTCCCGGTCTACTGGTTATTGATACCCCAGGACACGAGTCATTCAATAACTTGAGGTCTCGGGGTTCAGGTCTATGTGATATTGCAATTTTGGTCGTGGACATTATGCATGGCTTAGAGCCACAAACTATAGAGTCACTCAATCTATTAAAAATGAGGAACACTGAATTCATTGTTGCATTGAATAAGGTTGACAGGCTTTATGGCTGGAAAACATGTCGCAATGCTCCAATTCGTAAAGCAATGACACAGCAGTCTAAGGATGTTCAGAATGAGTTCAATATGAGGGTCACTCAGATTGTCACTCAGTTCAAGGAACAAGGGCTAAATACAGAATTGTATTACAAAAACAAAGAAATGGGCGAGACATTCAGCATTGTGCCTACAAGTGCAATAAGTGGTGAAGGAATCCCGGATATGTTATTACTATTAGTTCAGTGGACCCAAAAGACCATGACCGAGAAGCTTACATACAGCGAAGAAGTGCAGTGTACCGTTTTGGAAGTCAAGGTTATTGAAGGCCATGGAACTACTATTGATGTTGTTTTAGTTAATGGTGTTCTTCATGAAGGGGATCAAATAGTTGTATCTGGAATGCAGGGTCCAATTGTTACCACAATTCGAGCTTTATTGACACCTCATCCAATGAAGGAACTTCGTGTTAAGGGATCATATATCCATCACAAAGAAATCAAAGCTGCTATGGGAATCAAGATCACTGCCCAGGGGCTTGAACATGCTATTGCTGGAGCTAGTTTATATGTGGTAAAGCCTGATGATGATTTGGAATATATTAAAAAGGCAGCTTTGGAAGACGTGGAGTCGGTCTTGAGCAGGATTGACAGGAGTGGTGAGGGCGTTTGTGTCCAGGCATCTACCCTTGGCTCATTGGAAGCATTATTGGAGTTTCTGAAAACTCCAGAAGTGAATATTCCTGTTAGTGCTATAAACATAGGCCCTGTACACAAGAAGGATGTTATGAAGGCCAGTGTAATGCTTGAAAAGAAACGAGAGTATGCTACTATATTGGCATTTGATGTCAAAGTCACCCCTGAAGCTAGGGATCTTGCAGAAGAATTGGGTGTGAAAATTTTTATAGCGGATATCATTTATCATCTATTTGATCAATTTAAGGCTTACATGGACAACATTAAGGAGGAGAAAAAGAAAGAATCTGCGGATGAGGCAGTCTTCCCATGTGTTCTGAAGATCTTACCAAATTGTGTCTTCAACAAGAAGGATCCGATTGTTTTGGGAGTTGATATCCTTGAAGGCATTTTAAAGATTGGAACTCCAATTTGTATCCCTTCCCAAGAGTTCATTGATATTGGTCGCATTGCCTCCATTGAGAATAACCATAAACCGGTTGATTATGCGAAGAAAGGGCAGAAAGTAGCCATTAAGATTGTTGGCAGCAATTCTGAAGAACAGCAGAAAATGTTCGGGAGGCATTTTGAGATTGATGATGAACTTGTAAGCCATATTTCACGGAGATCTATTGATATTCTCAAAACTAATTATCGGGATGATCTGACTATGGAGGAATGGAAGCTGGTGGTTAAATTGAAGACTTTGTTCAAGATACAATAA
Protein sequence

>Msa0038440

MGKKKPAIRDDENPPPQQGGGKSKKKAPVIDDDEYSIGVEEVSEDAAPVAVEEKPGKKKGKKGNAKSKKDNDDDDFDDAVVVDDDDVNEIVFAGKKKGKSKKSGGGSSGGSVFASGFGVLGDEDDVDNDDEEKSEVTGEGDDDEDEPVVSFTGKKKSSKGSKKGGSSLFSALDENDDGEEESKNEKVEDDDDEPITFSGKKKKSSKGSKKAGGSLSKAIPEEDSVSVSESAKGGDDEKDEDDVSFAFTGKKKSSKKKSGSASAKVSDEIEFGSESVNVVEAEKPSVDNGNISKSEEVVGTSKNKKKNKKKSGRTKEEEDDLDKLLAELGEAPATAQPAAAPPQQDDKVQPVPVVGSAPGASGEKEGEDETVESAAAKKKKKKKEKEKEKKAAAAAAGSAPVIEAVEEKAEAIEPKKNDSKTKAADKKVPKHVREMQELLARRKEAEEKKKKEEEEKQRKEEEERRRIEELERQAEEAKRRKKEKEKEKLLKKKQEGKLLTGKQKEEARRLEAMRRQILNSTGGMTLPGADTGGPSKKPIYQTKKGKTTNRNHNGAAAVKTDESVEATETTADLDSEEPEKVEEVEMEDKVELPEVVEEVVDEDDDVEDEWDAKSWDDVNLNDRGAFADEEVDSEPEPIVKKEIKNGIPSKNAAGATNKPVTKPAAEETEDRKQAKVVVEDKKKRHDPQLSAVPSKPSEGNLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELKADATLKVPGLLVIDTPGHESFNNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLKMRNTEFIVALNKVDRLYGWKTCRNAPIRKAMTQQSKDVQNEFNMRVTQIVTQFKEQGLNTELYYKNKEMGETFSIVPTSAISGEGIPDMLLLLVQWTQKTMTEKLTYSEEVQCTVLEVKVIEGHGTTIDVVLVNGVLHEGDQIVVSGMQGPIVTTIRALLTPHPMKELRVKGSYIHHKEIKAAMGIKITAQGLEHAIAGASLYVVKPDDDLEYIKKAALEDVESVLSRIDRSGEGVCVQASTLGSLEALLEFLKTPEVNIPVSAINIGPVHKKDVMKASVMLEKKREYATILAFDVKVTPEARDLAEELGVKIFIADIIYHLFDQFKAYMDNIKEEKKKESADEAVFPCVLKILPNCVFNKKDPIVLGVDILEGILKIGTPICIPSQEFIDIGRIASIENNHKPVDYAKKGQKVAIKIVGSNSEEQQKMFGRHFEIDDELVSHISRRSIDILKTNYRDDLTMEEWKLVVKLKTLFKIQ*