AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0957870


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0957870 MtrunA17_Chr6g0475211 88.771 472 52 1 1 471 1 472 0.0 802
Msa0957870 MtrunA17_Chr6g0475211 91.398 93 6 1 532 622 442 534 3.77e-46 171
Msa0957870 MtrunA17_Chr3g0078341 85.805 472 62 3 1 471 1 468 0.0 796
Msa0957870 MtrunA17_Chr3g0078341 91.398 93 6 1 532 622 438 530 6.72e-46 170
Msa0957870 MtrunA17_Chr6g0482641 59.245 265 79 5 140 403 46 282 2.09e-101 310
Msa0957870 MtrunA17_Chr6g0476071 45.581 215 69 7 241 451 3 173 2.64e-45 158
Msa0957870 MtrunA17_Chr6g0476081 69.767 86 25 1 531 616 2 86 6.71e-32 118
Msa0957870 MtrunA17_Chr6g0450581 32.456 228 112 5 217 440 29 218 3.63e-27 112
Msa0957870 MtrunA17_Chr6g0450581 38.732 142 77 3 488 619 166 307 6.48e-18 85.1
Msa0957870 MtrunA17_Chr1g0149081 46.154 117 60 1 335 451 22 135 5.72e-25 100
Msa0957870 MtrunA17_Chr7g0223571 59.091 88 29 2 541 622 1 87 5.93e-24 96.7
Msa0957870 MtrunA17_Chr1g0149091 60.000 75 27 1 542 613 23 97 1.02e-23 95.9
Msa0957870 MtrunA17_Chr1g0149901 61.333 75 26 1 542 613 130 204 1.18e-22 96.7
Msa0957870 MtrunA17_Chr1g0149901 44.231 104 56 1 332 435 20 121 7.24e-19 85.5
Msa0957870 MtrunA17_Chr1g0149891 61.333 75 26 1 542 613 257 331 7.53e-22 97.4
Msa0957870 MtrunA17_Chr1g0149891 41.129 124 64 2 316 432 124 245 2.82e-18 86.7
Msa0957870 MtrunA17_Chr6g0450541 51.807 83 37 1 540 619 7 89 2.61e-21 88.6
Msa0957870 MtrunA17_Chr6g0482631 48.718 117 15 3 541 614 1 115 1.87e-20 87.0
Msa0957870 MtrunA17_Chr1g0159581 49.398 83 39 1 540 619 123 205 9.91e-18 82.0
Msa0957870 MtrunA17_Chr1g0159581 47.619 84 41 2 345 425 30 113 4.68e-15 74.3
Msa0957870 MtrunA17_Chr6g0450531 36.036 111 55 3 321 428 19 116 1.31e-16 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0957870 AT5G51740.1 51.752 371 154 5 105 471 31 380 6.49e-127 381
Msa0957870 AT5G51740.1 71.277 94 23 3 532 622 350 442 8.47e-32 129
Msa0957870 AT5G51740.2 51.752 371 154 5 105 471 74 423 1.54e-126 382
Msa0957870 AT5G51740.2 71.277 94 23 3 532 622 393 485 1.18e-31 129
Msa0957870 AT5G51740.3 53.429 350 139 4 105 451 74 402 3.02e-126 378

Find 142 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAATCTGGGTATTTGAATT+TGG 0.093969 6_3:+70226899 Msa0957870:CDS
TCCTAAGAGGTTAGGGAAAA+TGG 0.112500 6_3:+70227160 Msa0957870:CDS
GCAACCTGGGTATTTGAATT+TGG 0.129028 6_3:+70226992 Msa0957870:CDS
TCTAAAGGTGGTAACTTTAA+TGG 0.151078 6_3:+70227017 Msa0957870:CDS
ATGAGGTTCTTGATGATAAA+TGG 0.155660 6_3:+70227774 Msa0957870:CDS
TGGATTGAATTGGGAGATTT+TGG 0.167567 6_3:+70227859 Msa0957870:CDS
AACAAAGATGCTAGCTTTAA+TGG 0.185230 6_3:+70226924 Msa0957870:CDS
TGTCAAGGTGGTAACTTTAA+TGG 0.209828 6_3:+70227116 Msa0957870:CDS
GCTCTTGAGTTATCTCGTTT+TGG 0.223589 6_3:-70228934 None:intergenic
TAAGGATTTGATATGTTAAT+AGG 0.244723 6_3:+70230910 Msa0957870:three_prime_UTR
CAACCTGGGTATTTGAATTT+GGG 0.256623 6_3:+70226993 Msa0957870:CDS
TTGAGATAAATAAGAATATT+GGG 0.260342 6_3:+70227186 Msa0957870:CDS
TTTGAGATAAATAAGAATAT+TGG 0.272846 6_3:+70227185 Msa0957870:CDS
AAATGCGTTCGCTTCGTATA+AGG 0.273091 6_3:-70227458 None:intergenic
ATCCTAACTCTCACACTTTC+AGG 0.275058 6_3:-70227578 None:intergenic
ATAAATAGTGTGGGAGAAAA+TGG 0.282286 6_3:-70226669 None:intergenic
CAATCTGGGTATTTGAATTT+GGG 0.287113 6_3:+70226900 Msa0957870:CDS
GCAGAGATAGCAACTATTAT+TGG 0.296599 6_3:+70227971 Msa0957870:CDS
CTAAAGGTGGTAACTTTAAT+GGG 0.298124 6_3:+70227018 Msa0957870:CDS
CACATTTGGATGGATTGAAT+TGG 0.299543 6_3:+70227849 Msa0957870:CDS
CGGAGGTGTGTGATTTATAA+AGG 0.308925 6_3:-70226624 None:intergenic
AGCTTCTTCTCCATCTCTTT+CGG 0.314424 6_3:-70227491 None:intergenic
TGTGTATGTAAATGTGAATT+TGG 0.317129 6_3:+70230877 Msa0957870:three_prime_UTR
CCATCCAAATGTGACGTATA+AGG 0.321830 6_3:-70227839 None:intergenic
TGGTGTTGAAGGATTTCTTT+AGG 0.322830 6_3:+70230771 Msa0957870:CDS
TCTTCAATTCCTAAGAGGTT+AGG 0.330856 6_3:+70227152 Msa0957870:CDS
TGGGAAGATAGTCGTGTTTA+CGG 0.331309 6_3:+70227922 Msa0957870:CDS
TTTCTTGGTTCTTTCAATCA+TGG 0.343833 6_3:+70226776 Msa0957870:exon
GACATAGTGTTGACAATATC+AGG 0.345694 6_3:-70228440 None:intergenic
ACACTTTCAGGATGCATTGC+AGG 0.348683 6_3:-70227566 None:intergenic
CTCATTAAAGCTAACACCTT+TGG 0.357141 6_3:-70227216 None:intergenic
AGGATTCTGAAACCAATTCT+TGG 0.360608 6_3:-70227360 None:intergenic
GTCAAGGTGGTAACTTTAAT+GGG 0.361635 6_3:+70227117 Msa0957870:CDS
TCTTCGATTTCTAATAGATT+AGG 0.367132 6_3:+70227053 Msa0957870:CDS
AACCAATTCTTGGGCCCTCT+TGG 0.369695 6_3:-70227350 None:intergenic
AGCCAAGAGGGCCCAAGAAT+TGG 0.371217 6_3:+70227348 Msa0957870:CDS
AAGAAAACGAGCAGAATTAC+TGG 0.372401 6_3:+70230690 Msa0957870:CDS
CTTCAATTCCTAAGAGGTTA+GGG 0.379836 6_3:+70227153 Msa0957870:CDS
ATTGGTATAGTGGTTGGTTC+AGG 0.382197 6_3:+70227395 Msa0957870:CDS
GATTGCAAAATTCTGTTACT+AGG 0.384217 6_3:-70226882 None:intergenic
ACAAAGATGCTAGCTTTAAT+GGG 0.388105 6_3:+70226925 Msa0957870:CDS
CCTAAGAGGTTAGGGAAAAT+GGG 0.389385 6_3:+70227161 Msa0957870:CDS
AAGAGATGGAGAAGAAGCTT+GGG 0.391537 6_3:+70227495 Msa0957870:CDS
AGAGGAAAACTTGTTCTTGA+TGG 0.393320 6_3:+70226810 Msa0957870:CDS
CATCTTCTCAGCACTGTGTC+TGG 0.400313 6_3:-70228363 None:intergenic
GCTTCAGAAAATTCTGTGTT+TGG 0.406389 6_3:+70227674 Msa0957870:CDS
CATCAAGAACCTCATCTTCC+CGG 0.410729 6_3:-70227766 None:intergenic
ACATTTGGATGGATTGAATT+GGG 0.413686 6_3:+70227850 Msa0957870:CDS
GAATTTGGTTTCATTTACTA+AGG 0.415874 6_3:+70230892 Msa0957870:three_prime_UTR
AAGGGAAAGTTGGAGGGAAT+TGG 0.419080 6_3:+70227741 Msa0957870:CDS
GCAACCTTATACGTCACATT+TGG 0.419485 6_3:+70227835 Msa0957870:CDS
TATTTGAATTTGGGTTCTAA+AGG 0.419872 6_3:+70227002 Msa0957870:CDS
GGGAAGATAGTCGTGTTTAC+GGG 0.423649 6_3:+70227923 Msa0957870:CDS
AGAGAAGGACATGGTGTTGA+AGG 0.427494 6_3:+70230760 Msa0957870:CDS
TTTACATACACAGACAAGTA+TGG 0.429888 6_3:-70230866 None:intergenic
ACTGAAAATGAAGGGAAAGT+TGG 0.438682 6_3:+70227731 Msa0957870:CDS
AGGGGAAAGGGGAAGAAGAA+TGG 0.443081 6_3:-70226567 None:intergenic
GGATTCTGAAACCAATTCTT+GGG 0.448277 6_3:-70227359 None:intergenic
GTTGAAGAGAGGGTTGAGTA+AGG 0.449933 6_3:+70227625 Msa0957870:CDS
TGGTTCTTTCAATCATGGCT+TGG 0.451356 6_3:+70226781 Msa0957870:exon
GCATGTTATGATTGGTATAG+TGG 0.453566 6_3:+70227385 Msa0957870:CDS
AGAATTGGTTTCAGAATCCT+AGG 0.453587 6_3:+70227363 Msa0957870:CDS
AATGCAACACTCAGCATGCC+AGG 0.458010 6_3:-70229209 None:intergenic
ACCTAAAGTCTACGAAAAGT+TGG 0.458356 6_3:+70230612 Msa0957870:CDS
TGAGGTTCTTGATGATAAAT+GGG 0.460396 6_3:+70227775 Msa0957870:CDS
TTTGGTGGTGAAGGATCCTA+TGG 0.460965 6_3:+70227877 Msa0957870:CDS
TATTTCGCTACTCATCCATC+TGG 0.461058 6_3:+70230667 Msa0957870:CDS
AGCATGCCAGGGAGGAATGC+CGG 0.463092 6_3:-70229197 None:intergenic
TCATCTCCGGCATTCCTCCC+TGG 0.465548 6_3:+70229191 Msa0957870:CDS
CCTTATACGTCACATTTGGA+TGG 0.466205 6_3:+70227839 Msa0957870:CDS
AATCCTAGGCATGTTATGAT+TGG 0.472024 6_3:+70227377 Msa0957870:CDS
ATCTAAAAGCTTAGAATCGC+CGG 0.472748 6_3:-70230644 None:intergenic
AGAATTACTGGCTCAAGCTC+AGG 0.477979 6_3:+70230702 Msa0957870:CDS
GGTTGCAAAATTCTCGAACT+AGG 0.479881 6_3:-70226975 None:intergenic
AATAATTACCTTCTGGAGAA+AGG 0.480591 6_3:-70228482 None:intergenic
AGAAGATGACAAAGAATATG+TGG 0.484136 6_3:+70228378 Msa0957870:CDS
AAGTTGGAGGGAATTGGCAC+CGG 0.485472 6_3:+70227747 Msa0957870:CDS
AAAGAGATGGAGAAGAAGCT+TGG 0.487235 6_3:+70227494 Msa0957870:CDS
TTGAATTTGGGTTCTAAAGG+TGG 0.488118 6_3:+70227005 Msa0957870:CDS
AATAATAAGAATATTAGAGT+TGG 0.496382 6_3:+70227092 Msa0957870:CDS
TTTACTTGTGAAAGGGGAAA+GGG 0.498033 6_3:-70226579 None:intergenic
GTTATTGATTGAAGCATGAA+AGG 0.505204 6_3:-70226695 None:intergenic
GTTATGATTGGTATAGTGGT+TGG 0.507924 6_3:+70227389 Msa0957870:CDS
CAAGTCCATACAAGGCATCC+AGG 0.512539 6_3:-70228977 None:intergenic
ATCCTGAAAGTGTGAGAGTT+AGG 0.512578 6_3:+70227576 Msa0957870:CDS
AATGCATTGACTGAAAATGA+AGG 0.512873 6_3:+70227722 Msa0957870:CDS
CCTAAAGTCTACGAAAAGTT+GGG 0.514744 6_3:+70230613 Msa0957870:CDS
TTATCGAAGCGTTGAAGAGA+GGG 0.518421 6_3:+70227615 Msa0957870:CDS
AATATTAGAGTTGGTTGTCA+AGG 0.519986 6_3:+70227101 Msa0957870:CDS
TGAAAGGAAGATAAATAGTG+TGG 0.520206 6_3:-70226679 None:intergenic
ATGGTGGCATTTCCTACAGT+TGG 0.526476 6_3:-70230847 None:intergenic
ATAAATGGGTTCAGAAGAGT+AGG 0.531439 6_3:+70227789 Msa0957870:CDS
AGTTGGAGGGAATTGGCACC+GGG 0.532756 6_3:+70227748 Msa0957870:CDS
TTTAGGAGATTAGAGAAAAG+GGG 0.534498 6_3:+70227260 Msa0957870:CDS
TGAGATAAATAAGAATATTG+GGG 0.535578 6_3:+70227187 Msa0957870:CDS
CTGTTGCTGTGTATCATCTC+CGG 0.535740 6_3:+70229178 Msa0957870:CDS
TGCCACACGTGGATCGTAGC+CGG 0.536111 6_3:-70230590 None:intergenic
ATTAGAGTTGGTTGTCAAGG+TGG 0.541340 6_3:+70227104 Msa0957870:CDS
CTTCCCACCAGGTAAGCAAA+AGG 0.542507 6_3:-70227906 None:intergenic
GATAAATAAGAATATTGGGG+TGG 0.543034 6_3:+70227190 Msa0957870:CDS
AATATTGGGGTGGGTTCCAA+AGG 0.550451 6_3:+70227200 Msa0957870:CDS
CTTCTATTAGTTGCATCCGC+CGG 0.553436 6_3:+70230571 Msa0957870:CDS
TACGGCTACCTTTCTCCAGA+AGG 0.558879 6_3:+70228474 Msa0957870:CDS
GAAAATGAAGGGAAAGTTGG+AGG 0.559808 6_3:+70227734 Msa0957870:CDS
GAGCGAGTTTGAGAAGATGA+AGG 0.561104 6_3:+70227520 Msa0957870:CDS
AAGCAAAAGGCATTAACCAT+AGG 0.561244 6_3:-70227893 None:intergenic
ATAAATAAGAATATTGGGGT+GGG 0.563572 6_3:+70227191 Msa0957870:CDS
CAGACAAGTGTTCCAACTGT+AGG 0.567534 6_3:+70230835 Msa0957870:three_prime_UTR
ATACCAATCATAACATGCCT+AGG 0.568681 6_3:-70227380 None:intergenic
GAAATTGAAGCTGATTACAT+TGG 0.569179 6_3:+70230547 Msa0957870:CDS
GGTTGAGTAAGGAGAATGTG+TGG 0.571308 6_3:+70227636 Msa0957870:CDS
GAACCCAAATTCAAATACCC+AGG 0.572752 6_3:-70226996 None:intergenic
CTGTGTTTGGTGAAGAAAGT+GGG 0.573793 6_3:+70227687 Msa0957870:CDS
ACTGGCTCAAGCTCAGGTGA+TGG 0.577941 6_3:+70230708 Msa0957870:CDS
TCTGTGTTTGGTGAAGAAAG+TGG 0.579845 6_3:+70227686 Msa0957870:CDS
GAGTTTGAGAAGATGAAGGC+GGG 0.581578 6_3:+70227524 Msa0957870:CDS
ATTTGAATGTAGTATGAGCA+TGG 0.589277 6_3:+70228850 Msa0957870:intron
ATGCATTGACTGAAAATGAA+GGG 0.590623 6_3:+70227723 Msa0957870:CDS
CATAGTCAGAGGTGTAAACT+CGG 0.597056 6_3:-70228906 None:intergenic
ATTATCGAAGCGTTGAAGAG+AGG 0.605086 6_3:+70227614 Msa0957870:CDS
ATCATGGCTTGGTATAGAAG+AGG 0.608651 6_3:+70226792 Msa0957870:exon
CGAGTTTGAGAAGATGAAGG+CGG 0.609178 6_3:+70227523 Msa0957870:CDS
GAAGATGACAAAGAATATGT+GGG 0.612484 6_3:+70228379 Msa0957870:CDS
GAATTGGCACCGGGAAGATG+AGG 0.612493 6_3:+70227757 Msa0957870:CDS
GAAAGGAAGATAAATAGTGT+GGG 0.616590 6_3:-70226678 None:intergenic
AAAATGAAGGGAAAGTTGGA+GGG 0.619844 6_3:+70227735 Msa0957870:CDS
ACAGCAACAGCATTGTGCAC+AGG 0.621274 6_3:-70229165 None:intergenic
TGATTAGGTTGGACATGCTG+TGG 0.626030 6_3:+70228340 Msa0957870:intron
TTACTTGTGAAAGGGGAAAG+GGG 0.626771 6_3:-70226578 None:intergenic
AACACGACTATCTTCCCACC+AGG 0.637312 6_3:-70227917 None:intergenic
ATGCAACACTCAGCATGCCA+GGG 0.639308 6_3:-70229208 None:intergenic
ATAGTGTGGGAGAAAATGGA+AGG 0.640122 6_3:-70226665 None:intergenic
CGCCGGCTACGATCCACGTG+TGG 0.642188 6_3:+70230588 Msa0957870:CDS
ATATATAAGACTGTAAGAGA+AGG 0.650562 6_3:+70230745 Msa0957870:CDS
AGCAACTATTATTGGCCATG+AGG 0.653728 6_3:+70227979 Msa0957870:CDS
TAGACTTTAGGTGCCACACG+TGG 0.667217 6_3:-70230601 None:intergenic
AGAGATGGAGAAGAAGCTTG+GGG 0.675997 6_3:+70227496 Msa0957870:CDS
ACATACACAGACAAGTATGG+TGG 0.691543 6_3:-70230863 None:intergenic
CAACACTCAGCATGCCAGGG+AGG 0.697251 6_3:-70229205 None:intergenic
CACACGTGGATCGTAGCCGG+CGG 0.706408 6_3:-70230587 None:intergenic
GTTTGGTGAAGAAAGTGGGA+AGG 0.710512 6_3:+70227691 Msa0957870:CDS
AAGACTGTAAGAGAAGGACA+TGG 0.732952 6_3:+70230751 Msa0957870:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTTATTTATATTTATTA+TGG + chr6_3:70230476-70230495 Msa0957870:intron 0.0%
!!! AATTTTGATTTATCATATAT+TGG + chr6_3:70229686-70229705 Msa0957870:intron 10.0%
!!! AAAATGTACAAATTTAAAAT+TGG - chr6_3:70230133-70230152 None:intergenic 10.0%
!! CTGAAAAATTATAAAAAAAT+TGG - chr6_3:70230523-70230542 None:intergenic 10.0%
!!! CAATTTTTTTATAATTTTTC+AGG + chr6_3:70230521-70230540 Msa0957870:intron 10.0%
!! AATAATAAGAATATTAGAGT+TGG + chr6_3:70227092-70227111 Msa0957870:CDS 15.0%
!!! TTTGAGATAAATAAGAATAT+TGG + chr6_3:70227185-70227204 Msa0957870:CDS 15.0%
!! TTGAGATAAATAAGAATATT+GGG + chr6_3:70227186-70227205 Msa0957870:CDS 15.0%
!!! TTGAAGTTAATAAGAATTTT+AGG + chr6_3:70227285-70227304 Msa0957870:CDS 15.0%
!!! TTTTTATAACTGTGTATTTT+GGG + chr6_3:70227420-70227439 Msa0957870:CDS 15.0%
!!! TTTGATTTGTTTAACTTATT+AGG + chr6_3:70228008-70228027 Msa0957870:intron 15.0%
!! TTTATTAAGCAATATGAAAT+TGG + chr6_3:70229554-70229573 Msa0957870:intron 15.0%
!!! ATTGGAAATTTTATTTTAGT+TGG + chr6_3:70229572-70229591 Msa0957870:intron 15.0%
!! ATAACAATTATAAGTGTTTA+TGG - chr6_3:70229771-70229790 None:intergenic 15.0%
!! ATATTGAATAGAAGATTAAA+CGG - chr6_3:70230263-70230282 None:intergenic 15.0%
!!! ATTTTAATTATACACAAATG+TGG + chr6_3:70230439-70230458 Msa0957870:intron 15.0%
!!! TTTTTTATAATTTTTCAGGA+TGG + chr6_3:70230525-70230544 Msa0957870:intron 15.0%
!! ATGAAAAAGTTGAAAATTTG+TGG - chr6_3:70226748-70226767 None:intergenic 20.0%
!!! TTTTCATCAATTTAGTTTCT+TGG + chr6_3:70226761-70226780 Msa0957870:five_prime_UTR 20.0%
!! TTCTAATAGATTAGGAAAAA+TGG + chr6_3:70227061-70227080 Msa0957870:CDS 20.0%
!! TCTAATAGATTAGGAAAAAT+GGG + chr6_3:70227062-70227081 Msa0957870:CDS 20.0%
!! TGAGATAAATAAGAATATTG+GGG + chr6_3:70227187-70227206 Msa0957870:CDS 20.0%
!!! GTTTTTATAACTGTGTATTT+TGG + chr6_3:70227419-70227438 Msa0957870:CDS 20.0%
!! TCAAATAAGTTAATCCAAAT+AGG - chr6_3:70228034-70228053 None:intergenic 20.0%
!! TTAAGCTATTTATTCAAACA+AGG + chr6_3:70228256-70228275 Msa0957870:intron 20.0%
!! CACGTTAAATATTAAGATAA+GGG + chr6_3:70228615-70228634 Msa0957870:intron 20.0%
!! GAAAAATTATGTGTTTGATT+TGG - chr6_3:70228826-70228845 None:intergenic 20.0%
!!! GGACTTTTATTAATTTTTGT+TGG - chr6_3:70229040-70229059 None:intergenic 20.0%
!! CAAATAAAGAAAGAAAACAT+TGG - chr6_3:70229450-70229469 None:intergenic 20.0%
!! TGGTATTCTTGTATAAATTA+AGG - chr6_3:70229629-70229648 None:intergenic 20.0%
!! AAATTCCAATTCGTATTTAT+AGG - chr6_3:70229671-70229690 None:intergenic 20.0%
!! GAATGAAATTAATGCAAATA+TGG - chr6_3:70229883-70229902 None:intergenic 20.0%
!! CCTATACAAATGAATTAATT+TGG - chr6_3:70230038-70230057 None:intergenic 20.0%
!! CCAAATTAATTCATTTGTAT+AGG + chr6_3:70230035-70230054 Msa0957870:intron 20.0%
!! TAAGGATTTGATATGTTAAT+AGG + chr6_3:70230910-70230929 Msa0957870:three_prime_UTR 20.0%
!!! ATTTTCTAGTCTAATTTGGT+TGG - chr6_3:70226541-70226560 None:intergenic 25.0%
!!! TGACATTTTCTAGTCTAATT+TGG - chr6_3:70226545-70226564 None:intergenic 25.0%
!! AAATGCTTTTACTTGTGAAA+GGG - chr6_3:70226589-70226608 None:intergenic 25.0%
!! AAAATGCTTTTACTTGTGAA+AGG - chr6_3:70226590-70226609 None:intergenic 25.0%
! TTTGATGAGTTCAAAAATGT+GGG - chr6_3:70226724-70226743 None:intergenic 25.0%
!! TTTTGATGAGTTCAAAAATG+TGG - chr6_3:70226725-70226744 None:intergenic 25.0%
!! TATTTGAATTTGGGTTCTAA+AGG + chr6_3:70227002-70227021 Msa0957870:CDS 25.0%
! TCTTCGATTTCTAATAGATT+AGG + chr6_3:70227053-70227072 Msa0957870:CDS 25.0%
! ATAAATAAGAATATTGGGGT+GGG + chr6_3:70227191-70227210 Msa0957870:CDS 25.0%
!!! CGTCTTTTTCAAAGAATTTT+AGG + chr6_3:70227243-70227262 Msa0957870:CDS 25.0%
!!! ATTTTAGGAGATTAGAGAAA+AGG + chr6_3:70227258-70227277 Msa0957870:CDS 25.0%
!!! TTTTAGGAGATTAGAGAAAA+GGG + chr6_3:70227259-70227278 Msa0957870:CDS 25.0%
!! TTTAACTTATTAGGCCTATT+TGG + chr6_3:70228017-70228036 Msa0957870:intron 25.0%
! ATTGGTTATAAAGAGAGAAA+AGG - chr6_3:70228511-70228530 None:intergenic 25.0%
! AAGAGCAACAAAAATTCAAT+TGG - chr6_3:70228529-70228548 None:intergenic 25.0%
! GACTCATTTCTTTGATATAT+AGG + chr6_3:70228560-70228579 Msa0957870:intron 25.0%
! GCACGTTAAATATTAAGATA+AGG + chr6_3:70228614-70228633 Msa0957870:intron 25.0%
! TAAGGGAAAAACATGAAATT+AGG + chr6_3:70228632-70228651 Msa0957870:intron 25.0%
!! TTTAAGAAACGGTTACATTT+TGG - chr6_3:70229061-70229080 None:intergenic 25.0%
! TAACCGTTTCTTAAAATCAA+GGG + chr6_3:70229066-70229085 Msa0957870:intron 25.0%
!!! TTCTCCATTTTGTTTTTGTT+TGG + chr6_3:70229271-70229290 Msa0957870:intron 25.0%
! CAAACCAAACAAAAACAAAA+TGG - chr6_3:70229278-70229297 None:intergenic 25.0%
!!! CATTTTGTTTTTGTTTGGTT+TGG + chr6_3:70229276-70229295 Msa0957870:intron 25.0%
! AACAGTGCAAATTATAAAAG+AGG - chr6_3:70229359-70229378 None:intergenic 25.0%
!! TCTTTCTTTATTTGTTGCTA+TGG + chr6_3:70229456-70229475 Msa0957870:intron 25.0%
!!! GTTTGTCATGGTATTTTTTA+TGG - chr6_3:70229649-70229668 None:intergenic 25.0%
! ACAAACCTATAAATACGAAT+TGG + chr6_3:70229663-70229682 Msa0957870:intron 25.0%
! ATTATAAGTGTTTATGGAGA+GGG - chr6_3:70229765-70229784 None:intergenic 25.0%
! AATTATAAGTGTTTATGGAG+AGG - chr6_3:70229766-70229785 None:intergenic 25.0%
! GTAAAGTAGTACAACTTAAT+GGG - chr6_3:70229798-70229817 None:intergenic 25.0%
! TGCAAATATGGATGTAATTT+CGG - chr6_3:70229871-70229890 None:intergenic 25.0%
!! CATTTACATTTGTTTCTTGT+TGG + chr6_3:70230214-70230233 Msa0957870:intron 25.0%
! ATATATAAGACTGTAAGAGA+AGG + chr6_3:70230745-70230764 Msa0957870:CDS 25.0%
! TGTGTATGTAAATGTGAATT+TGG + chr6_3:70230877-70230896 Msa0957870:three_prime_UTR 25.0%
!! GAATTTGGTTTCATTTACTA+AGG + chr6_3:70230892-70230911 Msa0957870:three_prime_UTR 25.0%
!!! AGGTTTTAAATCATCAAAGA+AGG + chr6_3:70230930-70230949 Msa0957870:three_prime_UTR 25.0%
! AATGCTTTTACTTGTGAAAG+GGG - chr6_3:70226588-70226607 None:intergenic 30.0%
!! GGATGTAGAAAAAGTATTCA+CGG - chr6_3:70226647-70226666 None:intergenic 30.0%
ATAAATAGTGTGGGAGAAAA+TGG - chr6_3:70226672-70226691 None:intergenic 30.0%
GAAAGGAAGATAAATAGTGT+GGG - chr6_3:70226681-70226700 None:intergenic 30.0%
TGAAAGGAAGATAAATAGTG+TGG - chr6_3:70226682-70226701 None:intergenic 30.0%
! GTTATTGATTGAAGCATGAA+AGG - chr6_3:70226698-70226717 None:intergenic 30.0%
! TTTCTTGGTTCTTTCAATCA+TGG + chr6_3:70226776-70226795 Msa0957870:exon 30.0%
!! TCTTGATGGTTTTCATAACT+TGG + chr6_3:70226824-70226843 Msa0957870:CDS 30.0%
! TTTTCATAACTTGGCTTCTA+GGG + chr6_3:70226833-70226852 Msa0957870:CDS 30.0%
! AGGCTGAAAAATTGGATTTT+GGG - chr6_3:70226865-70226884 None:intergenic 30.0%
! TAGGCTGAAAAATTGGATTT+TGG - chr6_3:70226866-70226885 None:intergenic 30.0%
GATTGCAAAATTCTGTTACT+AGG - chr6_3:70226885-70226904 None:intergenic 30.0%
! AGTAACAGAATTTTGCAATC+TGG + chr6_3:70226885-70226904 Msa0957870:CDS 30.0%
! GTAACAGAATTTTGCAATCT+GGG + chr6_3:70226886-70226905 Msa0957870:CDS 30.0%
CAATCTGGGTATTTGAATTT+GGG + chr6_3:70226900-70226919 Msa0957870:CDS 30.0%
!! AACAAAGATGCTAGCTTTAA+TGG + chr6_3:70226924-70226943 Msa0957870:CDS 30.0%
!! ACAAAGATGCTAGCTTTAAT+GGG + chr6_3:70226925-70226944 Msa0957870:CDS 30.0%
TCTAAAGGTGGTAACTTTAA+TGG + chr6_3:70227017-70227036 Msa0957870:CDS 30.0%
CTAAAGGTGGTAACTTTAAT+GGG + chr6_3:70227018-70227037 Msa0957870:CDS 30.0%
! AATATTAGAGTTGGTTGTCA+AGG + chr6_3:70227101-70227120 Msa0957870:CDS 30.0%
GATAAATAAGAATATTGGGG+TGG + chr6_3:70227190-70227209 Msa0957870:CDS 30.0%
TTTAGGAGATTAGAGAAAAG+GGG + chr6_3:70227260-70227279 Msa0957870:CDS 30.0%
! TTAAAATGCTGCACATTTTG+TGG - chr6_3:70227329-70227348 None:intergenic 30.0%
!! AACTGTGTATTTTGGGAATA+TGG + chr6_3:70227427-70227446 Msa0957870:CDS 30.0%
!! AATGCATTGACTGAAAATGA+AGG + chr6_3:70227722-70227741 Msa0957870:CDS 30.0%
!! ATGCATTGACTGAAAATGAA+GGG + chr6_3:70227723-70227742 Msa0957870:CDS 30.0%
! ATGAGGTTCTTGATGATAAA+TGG + chr6_3:70227774-70227793 Msa0957870:CDS 30.0%
! TGAGGTTCTTGATGATAAAT+GGG + chr6_3:70227775-70227794 Msa0957870:CDS 30.0%
!! ACATTTGGATGGATTGAATT+GGG + chr6_3:70227850-70227869 Msa0957870:CDS 30.0%
CAAATCAAACAAATACCTCA+TGG - chr6_3:70227997-70228016 None:intergenic 30.0%
CAACTGTTTGAGAGATATTA+CGG + chr6_3:70228080-70228099 Msa0957870:intron 30.0%
GAAACAATATTTGACATGTC+TGG + chr6_3:70228102-70228121 Msa0957870:intron 30.0%
CTTAAGCGCTTATTTGATTA+AGG + chr6_3:70228213-70228232 Msa0957870:intron 30.0%
AGAAGATGACAAAGAATATG+TGG + chr6_3:70228378-70228397 Msa0957870:CDS 30.0%
GAAGATGACAAAGAATATGT+GGG + chr6_3:70228379-70228398 Msa0957870:CDS 30.0%
! AATAATTACCTTCTGGAGAA+AGG - chr6_3:70228485-70228504 None:intergenic 30.0%
! ATAGGTAATGTTTGTTAGAC+AGG + chr6_3:70228578-70228597 Msa0957870:intron 30.0%
ATGAAGTTTAGCTGAATTAG+TGG + chr6_3:70228665-70228684 Msa0957870:intron 30.0%
!! ATGTGTTTGATTTGGTCTTA+AGG - chr6_3:70228818-70228837 None:intergenic 30.0%
ATTTGAATGTAGTATGAGCA+TGG + chr6_3:70228850-70228869 Msa0957870:intron 30.0%
GTAACCGTTTCTTAAAATCA+AGG + chr6_3:70229065-70229084 Msa0957870:intron 30.0%
!! CAACCCTTGATTTTAAGAAA+CGG - chr6_3:70229072-70229091 None:intergenic 30.0%
TCGTATTTATAGGTTTGTCA+TGG - chr6_3:70229661-70229680 None:intergenic 30.0%
! AAAACATGGTTATGCCATTT+GGG - chr6_3:70229735-70229754 None:intergenic 30.0%
GGTAAAGTAGTACAACTTAA+TGG - chr6_3:70229799-70229818 None:intergenic 30.0%
AATTTGGTCTATCTCATACA+CGG - chr6_3:70230022-70230041 None:intergenic 30.0%
AACCATAATGAGTCTGATTT+CGG + chr6_3:70230155-70230174 Msa0957870:intron 30.0%
!!! GCTTCATTTTAACTTCTTTC+TGG + chr6_3:70230292-70230311 Msa0957870:intron 30.0%
TACACAAATGTGGTGAATTA+TGG + chr6_3:70230449-70230468 Msa0957870:intron 30.0%
GAAATTGAAGCTGATTACAT+TGG + chr6_3:70230547-70230566 Msa0957870:CDS 30.0%
TTTACATACACAGACAAGTA+TGG - chr6_3:70230869-70230888 None:intergenic 30.0%
TTTACTTGTGAAAGGGGAAA+GGG - chr6_3:70226582-70226601 None:intergenic 35.0%
! TTTTACTTGTGAAAGGGGAA+AGG - chr6_3:70226583-70226602 None:intergenic 35.0%
!! TGTAGAAAAAGTATTCACGG+AGG - chr6_3:70226644-70226663 None:intergenic 35.0%
! AGAGGAAAACTTGTTCTTGA+TGG + chr6_3:70226810-70226829 Msa0957870:CDS 35.0%
! GTTTTCATAACTTGGCTTCT+AGG + chr6_3:70226832-70226851 Msa0957870:CDS 35.0%
CTGTTACTAGGCTGAAAAAT+TGG - chr6_3:70226873-70226892 None:intergenic 35.0%
GCAATCTGGGTATTTGAATT+TGG + chr6_3:70226899-70226918 Msa0957870:CDS 35.0%
CAACCTGGGTATTTGAATTT+GGG + chr6_3:70226993-70227012 Msa0957870:CDS 35.0%
!! TTGAATTTGGGTTCTAAAGG+TGG + chr6_3:70227005-70227024 Msa0957870:CDS 35.0%
TGTCAAGGTGGTAACTTTAA+TGG + chr6_3:70227116-70227135 Msa0957870:CDS 35.0%
GTCAAGGTGGTAACTTTAAT+GGG + chr6_3:70227117-70227136 Msa0957870:CDS 35.0%
! CGTTTTCTTCAATTCCTAAG+AGG + chr6_3:70227147-70227166 Msa0957870:CDS 35.0%
TCTTCAATTCCTAAGAGGTT+AGG + chr6_3:70227152-70227171 Msa0957870:CDS 35.0%
CTTCAATTCCTAAGAGGTTA+GGG + chr6_3:70227153-70227172 Msa0957870:CDS 35.0%
CTCATTAAAGCTAACACCTT+TGG - chr6_3:70227219-70227238 None:intergenic 35.0%
!! GGATTCTGAAACCAATTCTT+GGG - chr6_3:70227362-70227381 None:intergenic 35.0%
!! AGGATTCTGAAACCAATTCT+TGG - chr6_3:70227363-70227382 None:intergenic 35.0%
! AGAATTGGTTTCAGAATCCT+AGG + chr6_3:70227363-70227382 Msa0957870:CDS 35.0%
AATCCTAGGCATGTTATGAT+TGG + chr6_3:70227377-70227396 Msa0957870:CDS 35.0%
ATACCAATCATAACATGCCT+AGG - chr6_3:70227383-70227402 None:intergenic 35.0%
GCATGTTATGATTGGTATAG+TGG + chr6_3:70227385-70227404 Msa0957870:CDS 35.0%
GTTATGATTGGTATAGTGGT+TGG + chr6_3:70227389-70227408 Msa0957870:CDS 35.0%
GCTTCAGAAAATTCTGTGTT+TGG + chr6_3:70227674-70227693 Msa0957870:CDS 35.0%
ACTGAAAATGAAGGGAAAGT+TGG + chr6_3:70227731-70227750 Msa0957870:CDS 35.0%
AAAATGAAGGGAAAGTTGGA+GGG + chr6_3:70227735-70227754 Msa0957870:CDS 35.0%
! ATAAATGGGTTCAGAAGAGT+AGG + chr6_3:70227789-70227808 Msa0957870:CDS 35.0%
GTTCAGAAGAGTAGGAAAAA+AGG + chr6_3:70227797-70227816 Msa0957870:CDS 35.0%
!! CACATTTGGATGGATTGAAT+TGG + chr6_3:70227849-70227868 Msa0957870:CDS 35.0%
! TGGATTGAATTGGGAGATTT+TGG + chr6_3:70227859-70227878 Msa0957870:CDS 35.0%
! ATTGAATTGGGAGATTTTGG+TGG + chr6_3:70227862-70227881 Msa0957870:CDS 35.0%
!! AAGCAAAAGGCATTAACCAT+AGG - chr6_3:70227896-70227915 None:intergenic 35.0%
GCAGAGATAGCAACTATTAT+TGG + chr6_3:70227971-70227990 Msa0957870:CDS 35.0%
!! GACATAGTGTTGACAATATC+AGG - chr6_3:70228443-70228462 None:intergenic 35.0%
!! CTATGTCATCGCTTTTGTTA+CGG + chr6_3:70228456-70228475 Msa0957870:CDS 35.0%
AAGGAGGAATAATTACCTTC+TGG - chr6_3:70228492-70228511 None:intergenic 35.0%
GGTTATAAAGAGAGAAAAGG+AGG - chr6_3:70228508-70228527 None:intergenic 35.0%
! TTTTGACCTTCCCAATGATT+TGG + chr6_3:70228781-70228800 Msa0957870:intron 35.0%
AGGAATAGAGCCAAATCATT+GGG - chr6_3:70228794-70228813 None:intergenic 35.0%
! CTCTTGAGTTATCTCGTTTT+GGG - chr6_3:70228936-70228955 None:intergenic 35.0%
! AATTATTTTCTGCACAGACC+TGG + chr6_3:70228959-70228978 Msa0957870:CDS 35.0%
CAAGAAACATGAAGGATGTA+TGG - chr6_3:70229100-70229119 None:intergenic 35.0%
AAACGCAACAAGAAACATGA+AGG - chr6_3:70229108-70229127 None:intergenic 35.0%
TTTCTGTCTGTTCATTGTGT+TGG + chr6_3:70229421-70229440 Msa0957870:intron 35.0%
! GAAGTATTCATTAGCCCAAA+TGG + chr6_3:70229718-70229737 Msa0957870:intron 35.0%
GAAAACATGGTTATGCCATT+TGG - chr6_3:70229736-70229755 None:intergenic 35.0%
TACTAGAGAATTCATGCATC+AGG - chr6_3:70229820-70229839 None:intergenic 35.0%
TATGGATGTAATTTCGGAGT+AGG - chr6_3:70229865-70229884 None:intergenic 35.0%
! ATTTGTTTCTTGTTGGACTG+TGG + chr6_3:70230221-70230240 Msa0957870:intron 35.0%
ACCTAAAGTCTACGAAAAGT+TGG + chr6_3:70230612-70230631 Msa0957870:CDS 35.0%
CCTAAAGTCTACGAAAAGTT+GGG + chr6_3:70230613-70230632 Msa0957870:CDS 35.0%
GAAAAGTTGGGAAAAATCTC+CGG + chr6_3:70230625-70230644 Msa0957870:CDS 35.0%
ATCTAAAAGCTTAGAATCGC+CGG - chr6_3:70230647-70230666 None:intergenic 35.0%
AAGAAAACGAGCAGAATTAC+TGG + chr6_3:70230690-70230709 Msa0957870:CDS 35.0%
! TGGTGTTGAAGGATTTCTTT+AGG + chr6_3:70230771-70230790 Msa0957870:CDS 35.0%
TTACTTGTGAAAGGGGAAAG+GGG - chr6_3:70226581-70226600 None:intergenic 40.0%
! CGGAGGTGTGTGATTTATAA+AGG - chr6_3:70226627-70226646 None:intergenic 40.0%
ATAGTGTGGGAGAAAATGGA+AGG - chr6_3:70226668-70226687 None:intergenic 40.0%
TGGTTCTTTCAATCATGGCT+TGG + chr6_3:70226781-70226800 Msa0957870:exon 40.0%
!! ATCATGGCTTGGTATAGAAG+AGG + chr6_3:70226792-70226811 Msa0957870:exon 40.0%
GGTTGCAAAATTCTCGAACT+AGG - chr6_3:70226978-70226997 None:intergenic 40.0%
! AGTTCGAGAATTTTGCAACC+TGG + chr6_3:70226978-70226997 Msa0957870:CDS 40.0%
! GTTCGAGAATTTTGCAACCT+GGG + chr6_3:70226979-70226998 Msa0957870:CDS 40.0%
GCAACCTGGGTATTTGAATT+TGG + chr6_3:70226992-70227011 Msa0957870:CDS 40.0%
GAACCCAAATTCAAATACCC+AGG - chr6_3:70226999-70227018 None:intergenic 40.0%
! ATTAGAGTTGGTTGTCAAGG+TGG + chr6_3:70227104-70227123 Msa0957870:CDS 40.0%
TCCTAAGAGGTTAGGGAAAA+TGG + chr6_3:70227160-70227179 Msa0957870:CDS 40.0%
CCTAAGAGGTTAGGGAAAAT+GGG + chr6_3:70227161-70227180 Msa0957870:CDS 40.0%
! TGCAGCATTTTAAGCCAAGA+GGG + chr6_3:70227336-70227355 Msa0957870:CDS 40.0%
! ATTGGTATAGTGGTTGGTTC+AGG + chr6_3:70227395-70227414 Msa0957870:CDS 40.0%
AAATGCGTTCGCTTCGTATA+AGG - chr6_3:70227461-70227480 None:intergenic 40.0%
!! GATTTTGATGCCGAAAGAGA+TGG + chr6_3:70227481-70227500 Msa0957870:CDS 40.0%
AGCTTCTTCTCCATCTCTTT+CGG - chr6_3:70227494-70227513 None:intergenic 40.0%
AAAGAGATGGAGAAGAAGCT+TGG + chr6_3:70227494-70227513 Msa0957870:CDS 40.0%
AAGAGATGGAGAAGAAGCTT+GGG + chr6_3:70227495-70227514 Msa0957870:CDS 40.0%
!! AAGATGAAGGCGGGTTTTAA+GGG + chr6_3:70227533-70227552 Msa0957870:CDS 40.0%
! ATCCTGAAAGTGTGAGAGTT+AGG + chr6_3:70227576-70227595 Msa0957870:CDS 40.0%
ATCCTAACTCTCACACTTTC+AGG - chr6_3:70227581-70227600 None:intergenic 40.0%
!! ATTATCGAAGCGTTGAAGAG+AGG + chr6_3:70227614-70227633 Msa0957870:CDS 40.0%
!! TTATCGAAGCGTTGAAGAGA+GGG + chr6_3:70227615-70227634 Msa0957870:CDS 40.0%
! TCTGTGTTTGGTGAAGAAAG+TGG + chr6_3:70227686-70227705 Msa0957870:CDS 40.0%
! CTGTGTTTGGTGAAGAAAGT+GGG + chr6_3:70227687-70227706 Msa0957870:CDS 40.0%
GAAAATGAAGGGAAAGTTGG+AGG + chr6_3:70227734-70227753 Msa0957870:CDS 40.0%
GAAGAGTAGGAAAAAAGGTC+AGG + chr6_3:70227802-70227821 Msa0957870:CDS 40.0%
GCAACCTTATACGTCACATT+TGG + chr6_3:70227835-70227854 Msa0957870:CDS 40.0%
CCATCCAAATGTGACGTATA+AGG - chr6_3:70227842-70227861 None:intergenic 40.0%
CCTTATACGTCACATTTGGA+TGG + chr6_3:70227839-70227858 Msa0957870:CDS 40.0%
! GTTAATGCCTTTTGCTTACC+TGG + chr6_3:70227899-70227918 Msa0957870:CDS 40.0%
TGGGAAGATAGTCGTGTTTA+CGG + chr6_3:70227922-70227941 Msa0957870:CDS 40.0%
AGCAACTATTATTGGCCATG+AGG + chr6_3:70227979-70227998 Msa0957870:CDS 40.0%
AGTCTTAACACTTTGCTGCT+TGG + chr6_3:70228317-70228336 Msa0957870:intron 40.0%
AGCTGAATTAGTGGAACTAG+AGG + chr6_3:70228674-70228693 Msa0957870:intron 40.0%
ATAGAGCCAAATCATTGGGA+AGG - chr6_3:70228790-70228809 None:intergenic 40.0%
CAGGAATAGAGCCAAATCAT+TGG - chr6_3:70228795-70228814 None:intergenic 40.0%
!! GTTTGATTTGGTCTTAAGGC+AGG - chr6_3:70228814-70228833 None:intergenic 40.0%
! CATAGTCAGAGGTGTAAACT+CGG - chr6_3:70228909-70228928 None:intergenic 40.0%
!! TTGAGTTATCTCGTTTTGGG+AGG - chr6_3:70228933-70228952 None:intergenic 40.0%
! GCTCTTGAGTTATCTCGTTT+TGG - chr6_3:70228937-70228956 None:intergenic 40.0%
AGTCATACCAAGTCCATACA+AGG - chr6_3:70228988-70229007 None:intergenic 40.0%
TCTCTGATTCTGTTCAGTGT+TGG + chr6_3:70229503-70229522 Msa0957870:intron 40.0%
CTCCGAAATCAGACTCATTA+TGG - chr6_3:70230160-70230179 None:intergenic 40.0%
GAAGATTAAACGGAAACCCT+AGG - chr6_3:70230253-70230272 None:intergenic 40.0%
TAACCAACCATGTTCTGACA+TGG + chr6_3:70230355-70230374 Msa0957870:intron 40.0%
AAAGTAGCCATGTCAGAACA+TGG - chr6_3:70230365-70230384 None:intergenic 40.0%
! CCCAACTTTTCGTAGACTTT+AGG - chr6_3:70230616-70230635 None:intergenic 40.0%
TATTTCGCTACTCATCCATC+TGG + chr6_3:70230667-70230686 Msa0957870:CDS 40.0%
AAGACTGTAAGAGAAGGACA+TGG + chr6_3:70230751-70230770 Msa0957870:CDS 40.0%
ACATACACAGACAAGTATGG+TGG - chr6_3:70230866-70230885 None:intergenic 40.0%
! CCCATTTTCCCTAACCTCTT+AGG - chr6_3:70227164-70227183 None:intergenic 45.0%
! AATATTGGGGTGGGTTCCAA+AGG + chr6_3:70227200-70227219 Msa0957870:CDS 45.0%
! GTGCAGCATTTTAAGCCAAG+AGG + chr6_3:70227335-70227354 Msa0957870:CDS 45.0%
AGAGATGGAGAAGAAGCTTG+GGG + chr6_3:70227496-70227515 Msa0957870:CDS 45.0%
GAGCGAGTTTGAGAAGATGA+AGG + chr6_3:70227520-70227539 Msa0957870:CDS 45.0%
CGAGTTTGAGAAGATGAAGG+CGG + chr6_3:70227523-70227542 Msa0957870:CDS 45.0%
GAGTTTGAGAAGATGAAGGC+GGG + chr6_3:70227524-70227543 Msa0957870:CDS 45.0%
!! GAAGATGAAGGCGGGTTTTA+AGG + chr6_3:70227532-70227551 Msa0957870:CDS 45.0%
!!! AGATGAAGGCGGGTTTTAAG+GGG + chr6_3:70227534-70227553 Msa0957870:CDS 45.0%
ACACTTTCAGGATGCATTGC+AGG - chr6_3:70227569-70227588 None:intergenic 45.0%
GTTGAAGAGAGGGTTGAGTA+AGG + chr6_3:70227625-70227644 Msa0957870:CDS 45.0%
GGTTGAGTAAGGAGAATGTG+TGG + chr6_3:70227636-70227655 Msa0957870:CDS 45.0%
! GTTTGGTGAAGAAAGTGGGA+AGG + chr6_3:70227691-70227710 Msa0957870:CDS 45.0%
AAGGGAAAGTTGGAGGGAAT+TGG + chr6_3:70227741-70227760 Msa0957870:CDS 45.0%
CATCAAGAACCTCATCTTCC+CGG - chr6_3:70227769-70227788 None:intergenic 45.0%
!!! TTGGGAGATTTTGGTGGTGA+AGG + chr6_3:70227868-70227887 Msa0957870:CDS 45.0%
!! TTTGGTGGTGAAGGATCCTA+TGG + chr6_3:70227877-70227896 Msa0957870:CDS 45.0%
! AATGCCTTTTGCTTACCTGG+TGG + chr6_3:70227902-70227921 Msa0957870:CDS 45.0%
! ATGCCTTTTGCTTACCTGGT+GGG + chr6_3:70227903-70227922 Msa0957870:CDS 45.0%
GGGAAGATAGTCGTGTTTAC+GGG + chr6_3:70227923-70227942 Msa0957870:CDS 45.0%
! CACTTTGCTGCTTGGTGATT+AGG + chr6_3:70228325-70228344 Msa0957870:intron 45.0%
! TTGCTGCTTGGTGATTAGGT+TGG + chr6_3:70228329-70228348 Msa0957870:intron 45.0%
!! TGATTAGGTTGGACATGCTG+TGG + chr6_3:70228340-70228359 Msa0957870:intron 45.0%
GCTACACGACTCAACGTATA+GGG - chr6_3:70228753-70228772 None:intergenic 45.0%
TGCTACACGACTCAACGTAT+AGG - chr6_3:70228754-70228773 None:intergenic 45.0%
!! TTTTGGGAGGTCATAGTCAG+AGG - chr6_3:70228920-70228939 None:intergenic 45.0%
CTGTTGCTGTGTATCATCTC+CGG + chr6_3:70229178-70229197 Msa0957870:CDS 45.0%
! TTTTCTTGCGTTTGCGTGTC+AGG + chr6_3:70229246-70229265 Msa0957870:CDS 45.0%
!! GAGAGGGCATTACGAAAACA+TGG - chr6_3:70229749-70229768 None:intergenic 45.0%
!! TTGGACTGTGGATTAGTCCT+AGG + chr6_3:70230233-70230252 Msa0957870:intron 45.0%
!! TGGACTGTGGATTAGTCCTA+GGG + chr6_3:70230234-70230253 Msa0957870:intron 45.0%
TAGCCATGTCAGAACATGGT+TGG - chr6_3:70230361-70230380 None:intergenic 45.0%
CTTCTATTAGTTGCATCCGC+CGG + chr6_3:70230571-70230590 Msa0957870:CDS 45.0%
! TCTGCTCGTTTTCTTCCAGA+TGG - chr6_3:70230685-70230704 None:intergenic 45.0%
!! AGAATTACTGGCTCAAGCTC+AGG + chr6_3:70230702-70230721 Msa0957870:CDS 45.0%
! AGAGAAGGACATGGTGTTGA+AGG + chr6_3:70230760-70230779 Msa0957870:CDS 45.0%
CAGACAAGTGTTCCAACTGT+AGG + chr6_3:70230835-70230854 Msa0957870:three_prime_UTR 45.0%
ATGGTGGCATTTCCTACAGT+TGG - chr6_3:70230850-70230869 None:intergenic 45.0%
!! TGAAAAATTATAAAAAAATT+GGG - chr6_3:70230522-70230541 None:intergenic 5.0%
AGGGGAAAGGGGAAGAAGAA+TGG - chr6_3:70226570-70226589 None:intergenic 50.0%
AACCAATTCTTGGGCCCTCT+TGG - chr6_3:70227353-70227372 None:intergenic 50.0%
AAGTTGGAGGGAATTGGCAC+CGG + chr6_3:70227747-70227766 Msa0957870:CDS 50.0%
AGGAAAAAAGGTCAGGAGCG+AGG + chr6_3:70227809-70227828 Msa0957870:CDS 50.0%
GGAAAAAAGGTCAGGAGCGA+GGG + chr6_3:70227810-70227829 Msa0957870:CDS 50.0%
CTTCCCACCAGGTAAGCAAA+AGG - chr6_3:70227909-70227928 None:intergenic 50.0%
AACACGACTATCTTCCCACC+AGG - chr6_3:70227920-70227939 None:intergenic 50.0%
CATCTTCTCAGCACTGTGTC+TGG - chr6_3:70228366-70228385 None:intergenic 50.0%
TACGGCTACCTTTCTCCAGA+AGG + chr6_3:70228474-70228493 Msa0957870:CDS 50.0%
ACAGACCTGGATGCCTTGTA+TGG + chr6_3:70228972-70228991 Msa0957870:intron 50.0%
! CAAGTCCATACAAGGCATCC+AGG - chr6_3:70228980-70228999 None:intergenic 50.0%
CTGGATGCCTTGTATGGACT+TGG + chr6_3:70228978-70228997 Msa0957870:intron 50.0%
ACAGCAACAGCATTGTGCAC+AGG - chr6_3:70229168-70229187 None:intergenic 50.0%
ATGCAACACTCAGCATGCCA+GGG - chr6_3:70229211-70229230 None:intergenic 50.0%
AATGCAACACTCAGCATGCC+AGG - chr6_3:70229212-70229231 None:intergenic 50.0%
! TAGACTTTAGGTGCCACACG+TGG - chr6_3:70230604-70230623 None:intergenic 50.0%
AGCCAAGAGGGCCCAAGAAT+TGG + chr6_3:70227348-70227367 Msa0957870:CDS 55.0%
AGTTGGAGGGAATTGGCACC+GGG + chr6_3:70227748-70227767 Msa0957870:CDS 55.0%
! GAATTGGCACCGGGAAGATG+AGG + chr6_3:70227757-70227776 Msa0957870:CDS 55.0%
! ACTGGCTCAAGCTCAGGTGA+TGG + chr6_3:70230708-70230727 Msa0957870:CDS 55.0%
TCATCTCCGGCATTCCTCCC+TGG + chr6_3:70229191-70229210 Msa0957870:CDS 60.0%
AGCATGCCAGGGAGGAATGC+CGG - chr6_3:70229200-70229219 None:intergenic 60.0%
CAACACTCAGCATGCCAGGG+AGG - chr6_3:70229208-70229227 None:intergenic 60.0%
TGCCACACGTGGATCGTAGC+CGG - chr6_3:70230593-70230612 None:intergenic 60.0%
CACACGTGGATCGTAGCCGG+CGG - chr6_3:70230590-70230609 None:intergenic 65.0%
! CGCCGGCTACGATCCACGTG+TGG + chr6_3:70230588-70230607 Msa0957870:CDS 70.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 70226531 70230967 70226531 ID=Msa0957870;Name=Msa0957870
chr6_3 mRNA 70226531 70230967 70226531 ID=Msa0957870-mRNA-1;Parent=Msa0957870;Name=Msa0957870-mRNA-1;_AED=0.06;_eAED=0.06;_QI=264|0.25|0.6|0.6|1|1|5|175|622
chr6_3 exon 70226531 70228000 70226531 ID=Msa0957870-mRNA-1:exon:12799;Parent=Msa0957870-mRNA-1
chr6_3 exon 70228347 70228495 70228347 ID=Msa0957870-mRNA-1:exon:12800;Parent=Msa0957870-mRNA-1
chr6_3 exon 70228862 70228988 70228862 ID=Msa0957870-mRNA-1:exon:12801;Parent=Msa0957870-mRNA-1
chr6_3 exon 70229131 70229267 70229131 ID=Msa0957870-mRNA-1:exon:12802;Parent=Msa0957870-mRNA-1
chr6_3 exon 70230543 70230967 70230543 ID=Msa0957870-mRNA-1:exon:12803;Parent=Msa0957870-mRNA-1
chr6_3 five_prime_UTR 70226531 70226794 70226531 ID=Msa0957870-mRNA-1:five_prime_utr;Parent=Msa0957870-mRNA-1
chr6_3 CDS 70226795 70228000 70226795 ID=Msa0957870-mRNA-1:cds;Parent=Msa0957870-mRNA-1
chr6_3 CDS 70228347 70228495 70228347 ID=Msa0957870-mRNA-1:cds;Parent=Msa0957870-mRNA-1
chr6_3 CDS 70228862 70228988 70228862 ID=Msa0957870-mRNA-1:cds;Parent=Msa0957870-mRNA-1
chr6_3 CDS 70229131 70229267 70229131 ID=Msa0957870-mRNA-1:cds;Parent=Msa0957870-mRNA-1
chr6_3 CDS 70230543 70230792 70230543 ID=Msa0957870-mRNA-1:cds;Parent=Msa0957870-mRNA-1
chr6_3 three_prime_UTR 70230793 70230967 70230793 ID=Msa0957870-mRNA-1:three_prime_utr;Parent=Msa0957870-mRNA-1
Gene Sequence

>Msa0957870

ATGGCTTGGTATAGAAGAGGAAAACTTGTTCTTGATGGTTTTCATAACTTGGCTTCTAGGGTTTCATCCCAAAATCCAATTTTTCAGCCTAGTAACAGAATTTTGCAATCTGGGTATTTGAATTTGGGTAACAAAGATGCTAGCTTTAATGGGTTTTCTTCGTTTTCTTCAATTTTTCAACCTAGTTCGAGAATTTTGCAACCTGGGTATTTGAATTTGGGTTCTAAAGGTGGTAACTTTAATGGGTTTTCTTCATTTTCTTCGATTTCTAATAGATTAGGAAAAATGGGTTTTGAAAATAATAAGAATATTAGAGTTGGTTGTCAAGGTGGTAACTTTAATGGGTTTTCTTCGTTTTCTTCAATTCCTAAGAGGTTAGGGAAAATGGGTTTTGAGATAAATAAGAATATTGGGGTGGGTTCCAAAGGTGTTAGCTTTAATGAGTTTTCGTCTTTTTCAAAGAATTTTAGGAGATTAGAGAAAAGGGGTTTTGAAGTTAATAAGAATTTTAGGAGATTTTACTATGTTGATCCACAAAATGTGCAGCATTTTAAGCCAAGAGGGCCCAAGAATTGGTTTCAGAATCCTAGGCATGTTATGATTGGTATAGTGGTTGGTTCAGGTGTTTTTATAACTGTGTATTTTGGGAATATGGAAACTGTTCCTTATACGAAGCGAACGCATTTGATTTTGATGCCGAAAGAGATGGAGAAGAAGCTTGGGGAGAGCGAGTTTGAGAAGATGAAGGCGGGTTTTAAGGGGAAATTGTTACCTGCAATGCATCCTGAAAGTGTGAGAGTTAGGATGATAGCGAATGATATTATCGAAGCGTTGAAGAGAGGGTTGAGTAAGGAGAATGTGTGGAGTGATATAGATTATGCTTCAGAAAATTCTGTGTTTGGTGAAGAAAGTGGGAAGGAGACGATTAATGCATTGACTGAAAATGAAGGGAAAGTTGGAGGGAATTGGCACCGGGAAGATGAGGTTCTTGATGATAAATGGGTTCAGAAGAGTAGGAAAAAAGGTCAGGAGCGAGGGTCGCAACCTTATACGTCACATTTGGATGGATTGAATTGGGAGATTTTGGTGGTGAAGGATCCTATGGTTAATGCCTTTTGCTTACCTGGTGGGAAGATAGTCGTGTTTACGGGTTTGCTTGAACATTTTAGAAGTGATGCAGAGATAGCAACTATTATTGGCCATGAGGTTGGACATGCTGTGGCCAGACACAGTGCTGAGAAGATGACAAAGAATATGTGGGTTTTAATTCTAAACTTCGTACTTTATCAATTCGTCACACCTGATATTGTCAACACTATGTCATCGCTTTTGTTACGGCTACCTTTCTCCAGAAGTATGAGCATGGTTGTCAAACTCGTTAGTCAACTCGTAGATTCAGCCGAGTTTACACCTCTGACTATGACCTCCCAAAACGAGATAACTCAAGAGCAGAATTATTTTCTGCACAGACCTGGATGCCTTTATAATACAATTCTAATTGCAACTATTTCTTATTCCTGTGCACAATGCTGTTGCTGTGTATCATCTCCGGCATTCCTCCCTGGCATGCTGAGTGTTGCATTGTGTTTCATCGCTATTTTCTTGCGTTTGCGTGTCAGGATGGAAATTGAAGCTGATTACATTGGTCTTCTATTAGTTGCATCCGCCGGCTACGATCCACGTGTGGCACCTAAAGTCTACGAAAAGTTGGGAAAAATCTCCGGCGATTCTAAGCTTTTAGATTATTTCGCTACTCATCCATCTGGAAGAAAACGAGCAGAATTACTGGCTCAAGCTCAGGTGATGGATGAAGCTCTTACTATATATAAGACTGTAAGAGAAGGACATGGTGTTGAAGGATTTCTTTAG

Protein sequence

>Msa0957870

MAWYRRGKLVLDGFHNLASRVSSQNPIFQPSNRILQSGYLNLGNKDASFNGFSSFSSIFQPSSRILQPGYLNLGSKGGNFNGFSSFSSISNRLGKMGFENNKNIRVGCQGGNFNGFSSFSSIPKRLGKMGFEINKNIGVGSKGVSFNEFSSFSKNFRRLEKRGFEVNKNFRRFYYVDPQNVQHFKPRGPKNWFQNPRHVMIGIVVGSGVFITVYFGNMETVPYTKRTHLILMPKEMEKKLGESEFEKMKAGFKGKLLPAMHPESVRVRMIANDIIEALKRGLSKENVWSDIDYASENSVFGEESGKETINALTENEGKVGGNWHREDEVLDDKWVQKSRKKGQERGSQPYTSHLDGLNWEILVVKDPMVNAFCLPGGKIVVFTGLLEHFRSDAEIATIIGHEVGHAVARHSAEKMTKNMWVLILNFVLYQFVTPDIVNTMSSLLLRLPFSRSMSMVVKLVSQLVDSAEFTPLTMTSQNEITQEQNYFLHRPGCLYNTILIATISYSCAQCCCCVSSPAFLPGMLSVALCFIAIFLRLRVRMEIEADYIGLLLVASAGYDPRVAPKVYEKLGKISGDSKLLDYFATHPSGRKRAELLAQAQVMDEALTIYKTVREGHGVEGFL*