Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0165970 | sp|Q9LZF1|HIP6_ARATH | 40.050 | 402 | 165 | 12 | 1 | 336 | 1 | 392 | 3.06e-59 | 198 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0165970 | A0A072VKN3 | 94.940 | 336 | 14 | 1 | 1 | 336 | 1 | 333 | 0.0 | 512 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004860 | Msa0165970 | 0.817750 | 2.805138e-52 | -8.615850e-47 |
| Msa0004920 | Msa0165970 | 0.806632 | 7.485490e-50 | -8.615850e-47 |
| Msa0005270 | Msa0165970 | 0.800705 | 1.271689e-48 | -8.615850e-47 |
| Msa0006880 | Msa0165970 | 0.805145 | 1.537782e-49 | -8.615850e-47 |
| Msa0008410 | Msa0165970 | 0.819529 | 1.107411e-52 | -8.615850e-47 |
| Msa0015140 | Msa0165970 | 0.811546 | 6.632054e-51 | -8.615850e-47 |
| Msa0025740 | Msa0165970 | 0.925229 | 2.432621e-90 | -8.615850e-47 |
| Msa0043980 | Msa0165970 | 0.808466 | 3.055407e-50 | -8.615850e-47 |
| Msa0045490 | Msa0165970 | 0.803099 | 4.097384e-49 | -8.615850e-47 |
| Msa0050760 | Msa0165970 | 0.803692 | 3.087423e-49 | -8.615850e-47 |
| Msa0052860 | Msa0165970 | 0.839719 | 1.339029e-57 | -8.615850e-47 |
| Msa0055150 | Msa0165970 | 0.820134 | 8.050886e-53 | -8.615850e-47 |
| Msa0056030 | Msa0165970 | 0.844135 | 9.120360e-59 | -8.615850e-47 |
| Msa0057140 | Msa0165970 | 0.841936 | 3.512218e-58 | -8.615850e-47 |
| Msa0064350 | Msa0165970 | 0.806274 | 8.906836e-50 | -8.615850e-47 |
| Msa0073460 | Msa0165970 | 0.947966 | 2.393839e-106 | -8.615850e-47 |
| Msa0086420 | Msa0165970 | 0.800520 | 1.387040e-48 | -8.615850e-47 |
| Msa0089360 | Msa0165970 | 0.806442 | 8.211390e-50 | -8.615850e-47 |
| Msa0090030 | Msa0165970 | 0.822553 | 2.227909e-53 | -8.615850e-47 |
| Msa0091500 | Msa0165970 | 0.822688 | 2.071964e-53 | -8.615850e-47 |
| Msa0094920 | Msa0165970 | 0.832447 | 9.405099e-56 | -8.615850e-47 |
| Msa0095010 | Msa0165970 | 0.811015 | 8.649767e-51 | -8.615850e-47 |
| Msa0108870 | Msa0165970 | 0.804272 | 2.339696e-49 | -8.615850e-47 |
| Msa0115460 | Msa0165970 | 0.815147 | 1.072811e-51 | -8.615850e-47 |
| Msa0120340 | Msa0165970 | 0.811954 | 5.406389e-51 | -8.615850e-47 |
| Msa0121620 | Msa0165970 | 0.898884 | 3.422427e-77 | -8.615850e-47 |
| Msa0131450 | Msa0165970 | 0.815648 | 8.300017e-52 | -8.615850e-47 |
| Msa0148120 | Msa0165970 | 0.807022 | 6.192264e-50 | -8.615850e-47 |
| Msa0149000 | Msa0165970 | 0.828601 | 8.213295e-55 | -8.615850e-47 |
| Msa0165970 | Msa0176330 | 0.805537 | 1.272365e-49 | -8.615850e-47 |
| Msa0165970 | Msa0184020 | 0.804812 | 1.804972e-49 | -8.615850e-47 |
| Msa0165970 | Msa0188630 | 0.821269 | 4.416370e-53 | -8.615850e-47 |
| Msa0165970 | Msa0188680 | -0.804627 | 1.972985e-49 | -8.615850e-47 |
| Msa0165970 | Msa0191050 | 0.803099 | 4.097384e-49 | -8.615850e-47 |
| Msa0165970 | Msa0211860 | 0.802435 | 5.617278e-49 | -8.615850e-47 |
| Msa0165970 | Msa0223290 | 0.802130 | 6.490462e-49 | -8.615850e-47 |
| Msa0165970 | Msa0224030 | 0.804646 | 1.955156e-49 | -8.615850e-47 |
| Msa0165970 | Msa0225340 | 0.804313 | 2.293525e-49 | -8.615850e-47 |
| Msa0165970 | Msa0233350 | 0.819779 | 9.707022e-53 | -8.615850e-47 |
| Msa0165970 | Msa0233610 | 0.806030 | 1.002679e-49 | -8.615850e-47 |
| Msa0165970 | Msa0236440 | 0.814779 | 1.294558e-51 | -8.615850e-47 |
| Msa0165970 | Msa0250670 | 0.800622 | 1.322182e-48 | -8.615850e-47 |
| Msa0165970 | Msa0260210 | 0.834891 | 2.305052e-56 | -8.615850e-47 |
| Msa0165970 | Msa0266210 | 0.803317 | 3.693533e-49 | -8.615850e-47 |
| Msa0165970 | Msa0270220 | -0.812424 | 4.269393e-51 | -8.615850e-47 |
| Msa0165970 | Msa0274350 | 0.854056 | 1.586295e-61 | -8.615850e-47 |
| Msa0165970 | Msa0276920 | 0.806122 | 9.587313e-50 | -8.615850e-47 |
| Msa0165970 | Msa0280630 | 0.826779 | 2.249003e-54 | -8.615850e-47 |
| Msa0165970 | Msa0281480 | 0.803253 | 3.807668e-49 | -8.615850e-47 |
| Msa0165970 | Msa0288730 | 0.809034 | 2.310222e-50 | -8.615850e-47 |
| Msa0165970 | Msa0289400 | 0.805346 | 1.395557e-49 | -8.615850e-47 |
| Msa0165970 | Msa0291500 | 0.816702 | 4.824779e-52 | -8.615850e-47 |
| Msa0165970 | Msa0304290 | 0.835682 | 1.455308e-56 | -8.615850e-47 |
| Msa0165970 | Msa0304330 | 0.836198 | 1.077226e-56 | -8.615850e-47 |
| Msa0165970 | Msa0305890 | 0.825206 | 5.318218e-54 | -8.615850e-47 |
| Msa0165970 | Msa0307560 | 0.834322 | 3.204275e-56 | -8.615850e-47 |
| Msa0165970 | Msa0307830 | -0.820259 | 7.538413e-53 | -8.615850e-47 |
| Msa0165970 | Msa0311700 | 0.802249 | 6.136433e-49 | -8.615850e-47 |
| Msa0165970 | Msa0314250 | 0.851986 | 6.207179e-61 | -8.615850e-47 |
| Msa0165970 | Msa0316940 | 0.825107 | 5.614120e-54 | -8.615850e-47 |
| Msa0165970 | Msa0320610 | 0.810853 | 9.373069e-51 | -8.615850e-47 |
| Msa0165970 | Msa0324240 | 0.814520 | 1.477771e-51 | -8.615850e-47 |
| Msa0165970 | Msa0327410 | 0.808817 | 2.570434e-50 | -8.615850e-47 |
| Msa0165970 | Msa0329350 | 0.817863 | 2.644289e-52 | -8.615850e-47 |
| Msa0165970 | Msa0340810 | 0.822103 | 2.833222e-53 | -8.615850e-47 |
| Msa0165970 | Msa0344870 | 0.804374 | 2.227970e-49 | -8.615850e-47 |
| Msa0165970 | Msa0347360 | 0.807455 | 5.013842e-50 | -8.615850e-47 |
| Msa0165970 | Msa0365490 | 0.801388 | 9.220256e-49 | -8.615850e-47 |
| Msa0165970 | Msa0372660 | 0.812622 | 3.863993e-51 | -8.615850e-47 |
| Msa0165970 | Msa0372670 | 0.808373 | 3.198045e-50 | -8.615850e-47 |
| Msa0165970 | Msa0379550 | 0.812375 | 4.376628e-51 | -8.615850e-47 |
| Msa0165970 | Msa0379640 | 0.801163 | 1.024901e-48 | -8.615850e-47 |
| Msa0165970 | Msa0380040 | 0.807872 | 4.087296e-50 | -8.615850e-47 |
| Msa0165970 | Msa0391690 | 0.800066 | 1.715445e-48 | -8.615850e-47 |
| Msa0165970 | Msa0394340 | 0.804492 | 2.104909e-49 | -8.615850e-47 |
| Msa0165970 | Msa0399340 | 0.803774 | 2.968616e-49 | -8.615850e-47 |
| Msa0165970 | Msa0402330 | 0.801954 | 7.055459e-49 | -8.615850e-47 |
| Msa0165970 | Msa0404700 | 0.801292 | 9.644160e-49 | -8.615850e-47 |
| Msa0165970 | Msa0419520 | 0.804991 | 1.656122e-49 | -8.615850e-47 |
| Msa0165970 | Msa0426330 | 0.842993 | 1.841657e-58 | -8.615850e-47 |
| Msa0165970 | Msa0427910 | 0.813793 | 2.138143e-51 | -8.615850e-47 |
| Msa0165970 | Msa0433360 | 0.808308 | 3.301026e-50 | -8.615850e-47 |
| Msa0165970 | Msa0439890 | 0.817692 | 2.889802e-52 | -8.615850e-47 |
| Msa0165970 | Msa0464900 | 0.834017 | 3.820945e-56 | -8.615850e-47 |
| Msa0165970 | Msa0465550 | 0.813001 | 3.192461e-51 | -8.615850e-47 |
| Msa0165970 | Msa0468130 | 0.813770 | 2.162827e-51 | -8.615850e-47 |
| Msa0165970 | Msa0475410 | 0.818857 | 1.574414e-52 | -8.615850e-47 |
| Msa0165970 | Msa0475580 | 0.804832 | 1.787560e-49 | -8.615850e-47 |
| Msa0165970 | Msa0477260 | 0.800840 | 1.193524e-48 | -8.615850e-47 |
| Msa0165970 | Msa0484780 | 0.829975 | 3.809773e-55 | -8.615850e-47 |
| Msa0165970 | Msa0489610 | 0.835890 | 1.289148e-56 | -8.615850e-47 |
| Msa0165970 | Msa0491520 | 0.803119 | 4.058163e-49 | -8.615850e-47 |
| Msa0165970 | Msa0505060 | 0.820739 | 5.850895e-53 | -8.615850e-47 |
| Msa0165970 | Msa0513440 | 0.800767 | 1.235217e-48 | -8.615850e-47 |
| Msa0165970 | Msa0519220 | 0.805351 | 1.392169e-49 | -8.615850e-47 |
| Msa0165970 | Msa0526890 | 0.806961 | 6.380078e-50 | -8.615850e-47 |
| Msa0165970 | Msa0527740 | 0.800302 | 1.536272e-48 | -8.615850e-47 |
| Msa0165970 | Msa0530650 | 0.815978 | 7.006038e-52 | -8.615850e-47 |
| Msa0165970 | Msa0547400 | 0.820213 | 7.723205e-53 | -8.615850e-47 |
| Msa0165970 | Msa0555200 | 0.868584 | 5.855613e-66 | -8.615850e-47 |
| Msa0165970 | Msa0556790 | 0.847826 | 9.043532e-60 | -8.615850e-47 |
| Msa0165970 | Msa0556860 | 0.850370 | 1.774089e-60 | -8.615850e-47 |
| Msa0165970 | Msa0561130 | -0.809012 | 2.334736e-50 | -8.615850e-47 |
| Msa0165970 | Msa0565620 | -0.808893 | 2.476530e-50 | -8.615850e-47 |
| Msa0165970 | Msa0577220 | 0.823328 | 1.469404e-53 | -8.615850e-47 |
| Msa0165970 | Msa0579370 | 0.804412 | 2.187607e-49 | -8.615850e-47 |
| Msa0165970 | Msa0587190 | 0.819792 | 9.641938e-53 | -8.615850e-47 |
| Msa0165970 | Msa0588240 | 0.825009 | 5.920915e-54 | -8.615850e-47 |
| Msa0165970 | Msa0602120 | 0.818161 | 2.265092e-52 | -8.615850e-47 |
| Msa0165970 | Msa0608710 | 0.873830 | 1.084611e-67 | -8.615850e-47 |
| Msa0165970 | Msa0620330 | 0.838332 | 3.061908e-57 | -8.615850e-47 |
| Msa0165970 | Msa0623700 | 0.801474 | 8.850975e-49 | -8.615850e-47 |
| Msa0165970 | Msa0626220 | 0.801209 | 1.003107e-48 | -8.615850e-47 |
| Msa0165970 | Msa0626990 | 0.809739 | 1.630076e-50 | -8.615850e-47 |
| Msa0165970 | Msa0627350 | 0.810640 | 1.042679e-50 | -8.615850e-47 |
| Msa0165970 | Msa0628290 | 0.835190 | 1.938758e-56 | -8.615850e-47 |
| Msa0165970 | Msa0628740 | 0.815973 | 7.026141e-52 | -8.615850e-47 |
| Msa0165970 | Msa0643250 | 0.800030 | 1.744693e-48 | -8.615850e-47 |
| Msa0165970 | Msa0652300 | 0.815610 | 8.462428e-52 | -8.615850e-47 |
| Msa0165970 | Msa0661090 | 0.821333 | 4.269675e-53 | -8.615850e-47 |
| Msa0165970 | Msa0666140 | 0.816047 | 6.762793e-52 | -8.615850e-47 |
| Msa0165970 | Msa0673470 | 0.805502 | 1.294386e-49 | -8.615850e-47 |
| Msa0165970 | Msa0679550 | 0.840415 | 8.816823e-58 | -8.615850e-47 |
| Msa0165970 | Msa0682950 | 0.812580 | 3.946523e-51 | -8.615850e-47 |
| Msa0165970 | Msa0686080 | 0.822906 | 1.843013e-53 | -8.615850e-47 |
| Msa0165970 | Msa0693380 | 0.803213 | 3.881377e-49 | -8.615850e-47 |
| Msa0165970 | Msa0693790 | 0.805675 | 1.190700e-49 | -8.615850e-47 |
| Msa0165970 | Msa0694250 | 0.812640 | 3.829276e-51 | -8.615850e-47 |
| Msa0165970 | Msa0694840 | 0.851508 | 8.482014e-61 | -8.615850e-47 |
| Msa0165970 | Msa0697940 | 0.801545 | 8.561214e-49 | -8.615850e-47 |
| Msa0165970 | Msa0714960 | 0.822944 | 1.806620e-53 | -8.615850e-47 |
| Msa0165970 | Msa0715110 | 0.843510 | 1.340310e-58 | -8.615850e-47 |
| Msa0165970 | Msa0715140 | 0.807807 | 4.220706e-50 | -8.615850e-47 |
| Msa0165970 | Msa0715150 | 0.821367 | 4.192216e-53 | -8.615850e-47 |
| Msa0165970 | Msa0724830 | 0.809641 | 1.711864e-50 | -8.615850e-47 |
| Msa0165970 | Msa0726080 | 0.804552 | 2.044684e-49 | -8.615850e-47 |
| Msa0165970 | Msa0731180 | 0.819447 | 1.155976e-52 | -8.615850e-47 |
| Msa0165970 | Msa0737800 | 0.809822 | 1.564767e-50 | -8.615850e-47 |
| Msa0165970 | Msa0750430 | 0.805564 | 1.256276e-49 | -8.615850e-47 |
| Msa0165970 | Msa0757050 | 0.811235 | 7.750206e-51 | -8.615850e-47 |
| Msa0165970 | Msa0757080 | 0.805536 | 1.273402e-49 | -8.615850e-47 |
| Msa0165970 | Msa0771580 | 0.804735 | 1.872735e-49 | -8.615850e-47 |
| Msa0165970 | Msa0788710 | 0.804460 | 2.136966e-49 | -8.615850e-47 |
| Msa0165970 | Msa0790390 | -0.814997 | 1.158364e-51 | -8.615850e-47 |
| Msa0165970 | Msa0793390 | 0.832758 | 7.875309e-56 | -8.615850e-47 |
| Msa0165970 | Msa0795080 | 0.810727 | 9.983740e-51 | -8.615850e-47 |
| Msa0165970 | Msa0798030 | 0.805643 | 1.208945e-49 | -8.615850e-47 |
| Msa0165970 | Msa0816590 | 0.809521 | 1.816060e-50 | -8.615850e-47 |
| Msa0165970 | Msa0817270 | 0.805398 | 1.361213e-49 | -8.615850e-47 |
| Msa0165970 | Msa0820530 | -0.808967 | 2.387499e-50 | -8.615850e-47 |
| Msa0165970 | Msa0823500 | 0.813573 | 2.390865e-51 | -8.615850e-47 |
| Msa0165970 | Msa0827280 | 0.814585 | 1.429270e-51 | -8.615850e-47 |
| Msa0165970 | Msa0846230 | 0.803840 | 2.877432e-49 | -8.615850e-47 |
| Msa0165970 | Msa0856090 | 0.813306 | 2.736814e-51 | -8.615850e-47 |
| Msa0165970 | Msa0862500 | 0.814414 | 1.559575e-51 | -8.615850e-47 |
| Msa0165970 | Msa0869120 | 0.824184 | 9.261146e-54 | -8.615850e-47 |
| Msa0165970 | Msa0871990 | 0.827712 | 1.344394e-54 | -8.615850e-47 |
| Msa0165970 | Msa0881030 | 0.808724 | 2.691105e-50 | -8.615850e-47 |
| Msa0165970 | Msa0882510 | 0.804244 | 2.370458e-49 | -8.615850e-47 |
| Msa0165970 | Msa0899230 | 0.834354 | 3.147094e-56 | -8.615850e-47 |
| Msa0165970 | Msa0905380 | 0.840663 | 7.591065e-58 | -8.615850e-47 |
| Msa0165970 | Msa0906690 | 0.803901 | 2.793726e-49 | -8.615850e-47 |
| Msa0165970 | Msa0908170 | 0.837368 | 5.416956e-57 | -8.615850e-47 |
| Msa0165970 | Msa0910980 | -0.801906 | 7.217024e-49 | -8.615850e-47 |
| Msa0165970 | Msa0924150 | -0.806306 | 8.771816e-50 | -8.615850e-47 |
| Msa0165970 | Msa0927670 | 0.803077 | 4.140383e-49 | -8.615850e-47 |
| Msa0165970 | Msa0930140 | 0.801973 | 6.992671e-49 | -8.615850e-47 |
| Msa0165970 | Msa0933230 | 0.803983 | 2.686388e-49 | -8.615850e-47 |
| Msa0165970 | Msa0933310 | 0.813885 | 2.040698e-51 | -8.615850e-47 |
| Msa0165970 | Msa0945840 | 0.820702 | 5.965090e-53 | -8.615850e-47 |
| Msa0165970 | Msa0960160 | 0.842009 | 3.357921e-58 | -8.615850e-47 |
| Msa0165970 | Msa0963090 | -0.803879 | 2.824192e-49 | -8.615850e-47 |
| Msa0165970 | Msa0967370 | 0.813880 | 2.045922e-51 | -8.615850e-47 |
| Msa0165970 | Msa0971020 | 0.825222 | 5.271656e-54 | -8.615850e-47 |
| Msa0165970 | Msa0971090 | 0.807429 | 5.076788e-50 | -8.615850e-47 |
| Msa0165970 | Msa0974630 | 0.800720 | 1.262412e-48 | -8.615850e-47 |
| Msa0165970 | Msa0999040 | 0.826154 | 3.169630e-54 | -8.615850e-47 |
| Msa0165970 | Msa1014420 | 0.811301 | 7.496648e-51 | -8.615850e-47 |
| Msa0165970 | Msa1021540 | 0.800586 | 1.344254e-48 | -8.615850e-47 |
| Msa0165970 | Msa1039880 | 0.808205 | 3.472646e-50 | -8.615850e-47 |
| Msa0165970 | Msa1040800 | 0.806529 | 7.872018e-50 | -8.615850e-47 |
| Msa0165970 | Msa1040890 | 0.821670 | 3.569311e-53 | -8.615850e-47 |
| Msa0165970 | Msa1050200 | 0.808226 | 3.437012e-50 | -8.615850e-47 |
| Msa0165970 | Msa1052290 | 0.809806 | 1.577507e-50 | -8.615850e-47 |
| Msa0165970 | Msa1082500 | 0.805689 | 1.182588e-49 | -8.615850e-47 |
| Msa0165970 | Msa1092090 | 0.841976 | 3.427138e-58 | -8.615850e-47 |
| Msa0165970 | Msa1096230 | 0.817681 | 2.906865e-52 | -8.615850e-47 |
| Msa0165970 | Msa1100720 | 0.829253 | 5.709837e-55 | -8.615850e-47 |
| Msa0165970 | Msa1102790 | 0.814236 | 1.707065e-51 | -8.615850e-47 |
| Msa0165970 | Msa1128330 | 0.813877 | 2.048539e-51 | -8.615850e-47 |
| Msa0165970 | Msa1151710 | 0.820085 | 8.264111e-53 | -8.615850e-47 |
| Msa0165970 | Msa1152520 | 0.808003 | 3.834667e-50 | -8.615850e-47 |
| Msa0165970 | Msa1178050 | 0.819365 | 1.206658e-52 | -8.615850e-47 |
| Msa0165970 | Msa1201560 | 0.810587 | 1.070360e-50 | -8.615850e-47 |
| Msa0165970 | Msa1203880 | 0.807813 | 4.207478e-50 | -8.615850e-47 |
| Msa0165970 | Msa1217830 | 0.802497 | 5.455202e-49 | -8.615850e-47 |
| Msa0165970 | Msa1219110 | 0.802158 | 6.406384e-49 | -8.615850e-47 |
| Msa0165970 | Msa1230040 | 0.801502 | 8.736003e-49 | -8.615850e-47 |
| Msa0165970 | Msa1233500 | 0.837337 | 5.516962e-57 | -8.615850e-47 |
| Msa0165970 | Msa1249920 | 0.829320 | 5.498432e-55 | -8.615850e-47 |
| Msa0165970 | Msa1254510 | 0.805180 | 1.511798e-49 | -8.615850e-47 |
| Msa0165970 | Msa1254710 | 0.800023 | 1.750122e-48 | -8.615850e-47 |
| Msa0165970 | Msa1255040 | -0.827449 | 1.554661e-54 | -8.615850e-47 |
| Msa0165970 | Msa1276440 | 0.825692 | 4.080851e-54 | -8.615850e-47 |
| Msa0165970 | Msa1291350 | 0.812980 | 3.226351e-51 | -8.615850e-47 |
| Msa0165970 | Msa1295490 | -0.818262 | 2.148983e-52 | -8.615850e-47 |
| Msa0165970 | Msa1303160 | 0.804441 | 2.156559e-49 | -8.615850e-47 |
| Msa0165970 | Msa1306750 | 0.805823 | 1.108125e-49 | -8.615850e-47 |
| Msa0165970 | Msa1307740 | 0.800870 | 1.176404e-48 | -8.615850e-47 |
| Msa0165970 | Msa1331320 | 0.804876 | 1.750050e-49 | -8.615850e-47 |
| Msa0165970 | Msa1331350 | 0.824404 | 8.221595e-54 | -8.615850e-47 |
| Msa0165970 | Msa1331910 | 0.814481 | 1.507455e-51 | -8.615850e-47 |
| Msa0165970 | Msa1339190 | 0.809569 | 1.773610e-50 | -8.615850e-47 |
| Msa0165970 | Msa1340020 | 0.803453 | 3.461237e-49 | -8.615850e-47 |
| Msa0165970 | Msa1371090 | 0.816044 | 6.774465e-52 | -8.615850e-47 |
| Msa0165970 | Msa1371240 | 0.804244 | 2.370985e-49 | -8.615850e-47 |
| Msa0165970 | Msa1376200 | 0.805658 | 1.200380e-49 | -8.615850e-47 |
| Msa0165970 | Msa1388860 | 0.825327 | 4.979321e-54 | -8.615850e-47 |
| Msa0165970 | Msa1403580 | -0.815148 | 1.072247e-51 | -8.615850e-47 |
| Msa0165970 | Msa1435370 | 0.803189 | 3.924855e-49 | -8.615850e-47 |
| Msa0165970 | Msa1440600 | 0.804211 | 2.408481e-49 | -8.615850e-47 |
| Msa0165970 | Msa1443290 | -0.812872 | 3.406263e-51 | -8.615850e-47 |
| Msa0165970 | Msa1444740 | 0.854868 | 9.241421e-62 | -8.615850e-47 |
| Msa0165970 | Msa1448630 | 0.802808 | 4.705784e-49 | -8.615850e-47 |
| Msa0165970 | Msa1461280 | 0.815629 | 8.381832e-52 | -8.615850e-47 |
| Msa0165970 | Msa1463600 | 0.822958 | 1.793227e-53 | -8.615850e-47 |
| Msa0165970 | Msa1465960 | 0.810016 | 1.421600e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0165970 | MtrunA17_Chr1g0180631 | 94.940 | 336 | 14 | 1 | 1 | 336 | 1 | 333 | 0.0 | 512 |
| Msa0165970 | MtrunA17_Chr7g0264601 | 46.686 | 347 | 134 | 9 | 29 | 336 | 15 | 349 | 2.73e-76 | 238 |
| Msa0165970 | MtrunA17_Chr4g0028461 | 39.739 | 307 | 134 | 3 | 30 | 336 | 69 | 324 | 1.31e-51 | 173 |
| Msa0165970 | MtrunA17_Chr2g0327311 | 41.081 | 185 | 88 | 4 | 26 | 204 | 64 | 233 | 7.45e-36 | 132 |
| Msa0165970 | MtrunA17_Chr8g0386231 | 40.556 | 180 | 94 | 2 | 25 | 203 | 49 | 216 | 1.60e-26 | 107 |
| Msa0165970 | MtrunA17_Chr3g0132051 | 33.143 | 175 | 100 | 2 | 29 | 202 | 36 | 194 | 1.47e-22 | 95.1 |
| Msa0165970 | MtrunA17_Chr3g0094841 | 31.313 | 198 | 111 | 3 | 29 | 224 | 28 | 202 | 2.17e-22 | 94.0 |
| Msa0165970 | MtrunA17_Chr5g0429111 | 32.759 | 174 | 94 | 3 | 30 | 203 | 56 | 206 | 2.99e-22 | 95.5 |
| Msa0165970 | MtrunA17_Chr8g0337951 | 26.144 | 306 | 153 | 7 | 30 | 335 | 32 | 264 | 3.28e-20 | 88.6 |
| Msa0165970 | MtrunA17_Chr3g0132061 | 30.682 | 176 | 106 | 2 | 29 | 203 | 36 | 196 | 4.52e-20 | 89.0 |
| Msa0165970 | MtrunA17_Chr3g0128091 | 27.160 | 324 | 147 | 8 | 26 | 335 | 35 | 283 | 5.48e-20 | 88.6 |
| Msa0165970 | MtrunA17_Chr2g0290471 | 33.520 | 179 | 103 | 3 | 26 | 203 | 33 | 196 | 6.76e-19 | 85.1 |
| Msa0165970 | MtrunA17_Chr6g0454851 | 48.485 | 66 | 34 | 0 | 26 | 91 | 17 | 82 | 2.51e-12 | 68.2 |
| Msa0165970 | MtrunA17_Chr4g0001151 | 35.075 | 134 | 71 | 2 | 29 | 161 | 170 | 288 | 9.16e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0165970 | AT5G03380.1 | 40.050 | 402 | 165 | 12 | 1 | 336 | 1 | 392 | 3.11e-60 | 198 |
| Msa0165970 | AT5G03380.2 | 40.431 | 371 | 148 | 11 | 32 | 336 | 2 | 365 | 6.56e-58 | 191 |
| Msa0165970 | AT5G03380.2 | 42.391 | 92 | 47 | 2 | 142 | 229 | 1 | 90 | 4.12e-11 | 63.9 |
| Msa0165970 | AT2G36950.1 | 41.713 | 362 | 128 | 13 | 30 | 336 | 53 | 386 | 2.56e-54 | 182 |
| Msa0165970 | AT2G28090.1 | 40.722 | 194 | 95 | 3 | 12 | 204 | 14 | 188 | 2.61e-30 | 115 |
| Msa0165970 | AT3G02960.1 | 32.386 | 176 | 96 | 4 | 29 | 203 | 38 | 191 | 2.38e-27 | 108 |
| Msa0165970 | AT1G29000.1 | 31.818 | 176 | 107 | 1 | 30 | 205 | 18 | 180 | 2.89e-22 | 95.1 |
| Msa0165970 | AT1G29000.2 | 31.818 | 176 | 107 | 1 | 30 | 205 | 18 | 180 | 2.89e-22 | 95.1 |
| Msa0165970 | AT5G24580.4 | 28.571 | 175 | 103 | 1 | 30 | 204 | 59 | 211 | 8.67e-19 | 85.9 |
| Msa0165970 | AT5G24580.1 | 28.571 | 175 | 103 | 1 | 30 | 204 | 59 | 211 | 8.67e-19 | 85.9 |
| Msa0165970 | AT5G24580.2 | 28.571 | 175 | 103 | 1 | 30 | 204 | 58 | 210 | 9.63e-19 | 85.9 |
| Msa0165970 | AT5G50740.2 | 39.416 | 137 | 67 | 2 | 29 | 164 | 29 | 150 | 1.54e-16 | 76.6 |
| Msa0165970 | AT5G50740.4 | 39.416 | 137 | 67 | 2 | 29 | 164 | 36 | 157 | 2.02e-16 | 76.3 |
| Msa0165970 | AT5G24580.3 | 26.857 | 175 | 103 | 2 | 30 | 204 | 59 | 208 | 1.39e-15 | 76.6 |
| Msa0165970 | AT5G27690.1 | 34.951 | 103 | 59 | 2 | 106 | 208 | 5 | 99 | 5.78e-11 | 63.5 |
Find 97 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTGAGGAGGTGGATTATT+AGG | 0.166312 | 1_4:-46840577 | None:intergenic |
| TTCTTCTCTTCTTCTTTCTT+AGG | 0.200920 | 1_4:-46840241 | None:intergenic |
| AATTAATTAATTACCTCTTT+AGG | 0.228053 | 1_4:-46839743 | None:intergenic |
| CGTTAAATTGCAAGAGAAAT+TGG | 0.249649 | 1_4:+46839562 | Msa0165970:CDS |
| CAACATTATATGGAGAATAA+TGG | 0.281211 | 1_4:+46840487 | Msa0165970:CDS |
| TAATAATAATCAACATTATA+TGG | 0.312578 | 1_4:+46840477 | Msa0165970:CDS |
| CAATTTCTCTTGCAATTTAA+CGG | 0.317272 | 1_4:-46839561 | None:intergenic |
| TCCTTCATCAGCTTTCTTCT+CGG | 0.317840 | 1_4:-46839274 | None:intergenic |
| AGAGTGGGGAGAGAAGTATA+AGG | 0.321545 | 1_4:-46839007 | None:intergenic |
| CCATGTGTGTGATTGGTAAT+AGG | 0.370399 | 1_4:-46839088 | None:intergenic |
| TACCTCACCCACCGTTTCAT+TGG | 0.371572 | 1_4:+46838967 | Msa0165970:five_prime_UTR |
| AACATTATATGGAGAATAAT+GGG | 0.379007 | 1_4:+46840488 | Msa0165970:CDS |
| GAAGGTGGAGGTTAATAAAA+TGG | 0.389488 | 1_4:+46840348 | Msa0165970:CDS |
| TGGAGAATCCTGTCCAGATT+TGG | 0.391214 | 1_4:+46840860 | Msa0165970:three_prime_UTR |
| TCCTCAGCTTTCTTCTCCTC+CGG | 0.392060 | 1_4:-46839683 | None:intergenic |
| GTGAGGTAATGGGATTGGTT+AGG | 0.394881 | 1_4:-46838952 | None:intergenic |
| TGAAGCTAGATCTGCTTTAA+CGG | 0.396241 | 1_4:-46839507 | None:intergenic |
| TGAAACGGTGGGTGAGGTAA+TGG | 0.399876 | 1_4:-46838963 | None:intergenic |
| AGATACTCTATCAAATCCTT+TGG | 0.402024 | 1_4:-46840181 | None:intergenic |
| TCAAACAAAGTGACAGTTAC+CGG | 0.410265 | 1_4:+46839527 | Msa0165970:CDS |
| CCAAATCCTTGTCTCCATCT+AGG | 0.412236 | 1_4:-46840135 | None:intergenic |
| AGACGCCGGAGCCGAGAAAC+CGG | 0.413190 | 1_4:+46839634 | Msa0165970:CDS |
| TGAGGTAATGGGATTGGTTA+GGG | 0.418479 | 1_4:-46838951 | None:intergenic |
| GTTGAAACGGCGAACCTAGA+TGG | 0.423969 | 1_4:+46840121 | Msa0165970:CDS |
| TTTCTCTTCCAAATCTGGAC+AGG | 0.432944 | 1_4:-46840868 | None:intergenic |
| CCTAGATGGAGACAAGGATT+TGG | 0.435138 | 1_4:+46840135 | Msa0165970:CDS |
| TCTGAGGAGGTGGATTATTA+GGG | 0.436820 | 1_4:-46840576 | None:intergenic |
| ACCTCTCCCATGTGTGTGAT+TGG | 0.439873 | 1_4:-46839095 | None:intergenic |
| AAATATTAGACTGGCTCAGC+TGG | 0.440021 | 1_4:+46840836 | Msa0165970:three_prime_UTR |
| GAGTGGGGAGAGAAGTATAA+GGG | 0.443777 | 1_4:-46839006 | None:intergenic |
| TTCTCTTCTTCTTTCTTAGG+TGG | 0.449970 | 1_4:-46840238 | None:intergenic |
| GAAACGGTGGGTGAGGTAAT+GGG | 0.452517 | 1_4:-46838962 | None:intergenic |
| ATTAGACTGGCTCAGCTGGC+TGG | 0.453511 | 1_4:+46840840 | Msa0165970:three_prime_UTR |
| CGGTGGAGATGCGGCGAAGG+TGG | 0.453941 | 1_4:+46840333 | Msa0165970:CDS |
| TTTAACGGCGTCAAATTTAC+CGG | 0.454292 | 1_4:-46839546 | None:intergenic |
| CTCCGCCGGTTTCTCGGCTC+CGG | 0.455657 | 1_4:-46839639 | None:intergenic |
| AAGTCGAGTTTGTAAACAAC+AGG | 0.458834 | 1_4:-46839333 | None:intergenic |
| TGAAAAGAAAGAGAAAGAAA+AGG | 0.465817 | 1_4:+46840282 | Msa0165970:CDS |
| ACAGGAGCAGGAGCAGGAAC+AGG | 0.469773 | 1_4:-46839315 | None:intergenic |
| GGGAGAGAAGTATAAGGGAG+AGG | 0.494183 | 1_4:-46839001 | None:intergenic |
| AAGTAGTAACTATGCTGGTA+TGG | 0.497316 | 1_4:+46840417 | Msa0165970:CDS |
| GAAGAAAGAAGAGAAGAAAG+TGG | 0.498576 | 1_4:+46840309 | Msa0165970:CDS |
| AACCAATGAAACGGTGGGTG+AGG | 0.500842 | 1_4:-46838969 | None:intergenic |
| CACATAAGAGAACAAGCATT+GGG | 0.508286 | 1_4:-46840616 | None:intergenic |
| GCTCCGATGTATTATTATGA+AGG | 0.510924 | 1_4:+46840391 | Msa0165970:CDS |
| TGGAGATGCGGCGAAGGTGG+AGG | 0.511085 | 1_4:+46840336 | Msa0165970:CDS |
| TTTCATCATCAACCTGGGTA+TGG | 0.520569 | 1_4:+46840445 | Msa0165970:CDS |
| AATATATATAACCAATGAAA+CGG | 0.528489 | 1_4:-46838978 | None:intergenic |
| TCACTGAACATCTGAGGAGG+TGG | 0.529922 | 1_4:-46840586 | None:intergenic |
| TTATTAGGGTGCATGTAATA+CGG | 0.531642 | 1_4:-46840562 | None:intergenic |
| ACCGAGAAGAAAGCTGATGA+AGG | 0.540526 | 1_4:+46839273 | Msa0165970:CDS |
| GGTACTTGAGGTGGCTGCAT+AGG | 0.542416 | 1_4:-46840541 | None:intergenic |
| TTATTAAACAGGAGTTGAAA+CGG | 0.544576 | 1_4:+46840108 | Msa0165970:intron |
| TATAGAGATAAATATTAGAC+TGG | 0.545083 | 1_4:+46840827 | Msa0165970:three_prime_UTR |
| GGTGGGTGAGGTAATGGGAT+TGG | 0.546089 | 1_4:-46838957 | None:intergenic |
| CATCAACCTGGGTATGGTGG+TGG | 0.547203 | 1_4:+46840451 | Msa0165970:CDS |
| AAAGAAAGAGAAAGAAAAGG+CGG | 0.548738 | 1_4:+46840285 | Msa0165970:CDS |
| CGAAGTGCTCGTCATTTCGC+TGG | 0.552259 | 1_4:+46839387 | Msa0165970:CDS |
| AGTTTGTAAACAACAGGAGC+AGG | 0.553378 | 1_4:-46839327 | None:intergenic |
| GGTCAAAGTAGTAACTATGC+TGG | 0.556121 | 1_4:+46840412 | Msa0165970:CDS |
| AAGGATTTGGTAACAGTGAA+AGG | 0.556405 | 1_4:+46840148 | Msa0165970:CDS |
| TATGTTAGATATTAGAATTG+TGG | 0.557101 | 1_4:-46839064 | None:intergenic |
| GGACGGTGGAGATGCGGCGA+AGG | 0.557262 | 1_4:+46840330 | Msa0165970:CDS |
| TCACATAAGAGAACAAGCAT+TGG | 0.558548 | 1_4:-46840617 | None:intergenic |
| GGCTGAGAAAGCTAAGAAGA+AGG | 0.559878 | 1_4:+46839583 | Msa0165970:CDS |
| GATCAATTTCATCATCAACC+TGG | 0.560641 | 1_4:+46840439 | Msa0165970:CDS |
| CCTATTACCAATCACACACA+TGG | 0.561709 | 1_4:+46839088 | Msa0165970:exon |
| AGAATCATTATGAAGTTCAA+AGG | 0.563915 | 1_4:+46839958 | Msa0165970:CDS |
| TAAACAACAGGAGCAGGAGC+AGG | 0.567749 | 1_4:-46839321 | None:intergenic |
| TAATACATCGGAGCTTGTAT+CGG | 0.568277 | 1_4:-46840382 | None:intergenic |
| GAAGAGAAGAAAGTGGACGG+TGG | 0.569092 | 1_4:+46840316 | Msa0165970:CDS |
| ATATTAGAATTGTGGTGTTG+TGG | 0.570211 | 1_4:-46839056 | None:intergenic |
| GAAAGTGGACGGTGGAGATG+CGG | 0.575166 | 1_4:+46840324 | Msa0165970:CDS |
| CATCATCAACCTGGGTATGG+TGG | 0.581791 | 1_4:+46840448 | Msa0165970:CDS |
| GAAAGGAACAATGGAACCAA+AGG | 0.586961 | 1_4:+46840165 | Msa0165970:CDS |
| TATATAACCAATGAAACGGT+GGG | 0.588620 | 1_4:-46838974 | None:intergenic |
| AAAGAAGAGAAGAAAGTGGA+CGG | 0.599132 | 1_4:+46840313 | Msa0165970:CDS |
| ATCAATTTCATCATCAACCT+GGG | 0.600796 | 1_4:+46840440 | Msa0165970:CDS |
| GGGTATATGAATATGAATCA+TGG | 0.602668 | 1_4:+46840508 | Msa0165970:CDS |
| GGTAACAGTGAAAGGAACAA+TGG | 0.605375 | 1_4:+46840156 | Msa0165970:CDS |
| CGCCGGAGCCGAGAAACCGG+CGG | 0.606076 | 1_4:+46839637 | Msa0165970:CDS |
| ACCAATCACACACATGGGAG+AGG | 0.606723 | 1_4:+46839094 | Msa0165970:exon |
| ATGAATATGAATCATGGTGG+TGG | 0.613279 | 1_4:+46840514 | Msa0165970:CDS |
| TGCATGTAATACGGTACTTG+AGG | 0.613430 | 1_4:-46840553 | None:intergenic |
| TTCTCATCACTGAACATCTG+AGG | 0.619062 | 1_4:-46840592 | None:intergenic |
| ATATATAACCAATGAAACGG+TGG | 0.620687 | 1_4:-46838975 | None:intergenic |
| AAACTCGACTTACATTGTGA+AGG | 0.624408 | 1_4:+46839345 | Msa0165970:CDS |
| TGACCTTCATAATAATACAT+CGG | 0.624646 | 1_4:-46840394 | None:intergenic |
| TTATAACCACCACCATACCC+AGG | 0.654821 | 1_4:-46840457 | None:intergenic |
| TCATCACTGAACATCTGAGG+AGG | 0.657828 | 1_4:-46840589 | None:intergenic |
| ATGTAATACGGTACTTGAGG+TGG | 0.661458 | 1_4:-46840550 | None:intergenic |
| ACCGGAGGAGAAGAAAGCTG+AGG | 0.672813 | 1_4:+46839682 | Msa0165970:CDS |
| AGTGTGTATACACTTATGCA+CGG | 0.673850 | 1_4:+46840655 | Msa0165970:three_prime_UTR |
| AAGATCAGATTGCACTGTGA+CGG | 0.678394 | 1_4:+46839916 | Msa0165970:CDS |
| GGCGAACCTAGATGGAGACA+AGG | 0.682048 | 1_4:+46840129 | Msa0165970:CDS |
| CTATTACCAATCACACACAT+GGG | 0.698797 | 1_4:+46839089 | Msa0165970:exon |
| TATATGAATATGAATCATGG+TGG | 0.739870 | 1_4:+46840511 | Msa0165970:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAATTTATTTATTTAT+TGG | + | chr1_4:46839819-46839838 | Msa0165970:intron | 0.0% |
| !! | ATTAAATTTATTTATTTATT+GGG | + | chr1_4:46839820-46839839 | Msa0165970:intron | 0.0% |
| !!! | TAAATAAATTTTTTTTTTTT+TGG | - | chr1_4:46839866-46839885 | None:intergenic | 0.0% |
| !! | AATTAAATTTATTTATTTAT+TGG | + | chr1_4:46839819-46839838 | Msa0165970:intron | 0.0% |
| !! | ATTAAATTTATTTATTTATT+GGG | + | chr1_4:46839820-46839839 | Msa0165970:intron | 0.0% |
| !!! | TAAATAAATTTTTTTTTTTT+TGG | - | chr1_4:46839866-46839885 | None:intergenic | 0.0% |
| !! | AAATTTAATTAATACAAAGT+CGG | - | chr1_4:46839809-46839828 | None:intergenic | 10.0% |
| !!! | ATAAATTTTTTTTTTTTTGG+TGG | - | chr1_4:46839863-46839882 | None:intergenic | 10.0% |
| !! | TAATAATAATCAACATTATA+TGG | + | chr1_4:46840477-46840496 | Msa0165970:CDS | 10.0% |
| !!! | AAATTTTGTTTATTTGTTTA+TGG | + | chr1_4:46840984-46841003 | Msa0165970:three_prime_UTR | 10.0% |
| !! | AAATTTAATTAATACAAAGT+CGG | - | chr1_4:46839809-46839828 | None:intergenic | 10.0% |
| !!! | ATAAATTTTTTTTTTTTTGG+TGG | - | chr1_4:46839863-46839882 | None:intergenic | 10.0% |
| !! | TAATAATAATCAACATTATA+TGG | + | chr1_4:46840477-46840496 | Msa0165970:CDS | 10.0% |
| !!! | AAATTTTGTTTATTTGTTTA+TGG | + | chr1_4:46840984-46841003 | Msa0165970:three_prime_UTR | 10.0% |
| !! | AATATATATAACCAATGAAA+CGG | - | chr1_4:46838981-46839000 | None:intergenic | 15.0% |
| !! | ATATACTAATACTAATGAAA+AGG | - | chr1_4:46839138-46839157 | None:intergenic | 15.0% |
| !! | AGAATATTCATTAACAAATT+TGG | + | chr1_4:46839464-46839483 | Msa0165970:intron | 15.0% |
| !! | AATTAATTAATTACCTCTTT+AGG | - | chr1_4:46839746-46839765 | None:intergenic | 15.0% |
| !!! | ATTTATTAATTTTCAGAGTA+CGG | + | chr1_4:46839885-46839904 | Msa0165970:intron | 15.0% |
| !!! | GGTTATTTTATTTGAAATTT+AGG | - | chr1_4:46839994-46840013 | None:intergenic | 15.0% |
| !!! | TTAATTAATTGTTAATTTGG+TGG | + | chr1_4:46840076-46840095 | Msa0165970:intron | 15.0% |
| !! | AATATATATAACCAATGAAA+CGG | - | chr1_4:46838981-46839000 | None:intergenic | 15.0% |
| !! | ATATACTAATACTAATGAAA+AGG | - | chr1_4:46839138-46839157 | None:intergenic | 15.0% |
| !! | AGAATATTCATTAACAAATT+TGG | + | chr1_4:46839464-46839483 | Msa0165970:intron | 15.0% |
| !! | AATTAATTAATTACCTCTTT+AGG | - | chr1_4:46839746-46839765 | None:intergenic | 15.0% |
| !!! | ATTTATTAATTTTCAGAGTA+CGG | + | chr1_4:46839885-46839904 | Msa0165970:intron | 15.0% |
| !!! | GGTTATTTTATTTGAAATTT+AGG | - | chr1_4:46839994-46840013 | None:intergenic | 15.0% |
| !!! | TTAATTAATTGTTAATTTGG+TGG | + | chr1_4:46840076-46840095 | Msa0165970:intron | 15.0% |
| !! | TATGTTAGATATTAGAATTG+TGG | - | chr1_4:46839067-46839086 | None:intergenic | 20.0% |
| !!! | AACAAATTTGGAATATATTC+AGG | + | chr1_4:46839476-46839495 | Msa0165970:intron | 20.0% |
| !! | AACATTATATGGAGAATAAT+GGG | + | chr1_4:46840488-46840507 | Msa0165970:CDS | 20.0% |
| !!! | CATATAGAGAAATTTTATGT+TGG | + | chr1_4:46840786-46840805 | Msa0165970:three_prime_UTR | 20.0% |
| !! | TATAGAGATAAATATTAGAC+TGG | + | chr1_4:46840827-46840846 | Msa0165970:three_prime_UTR | 20.0% |
| !! | TATGTTAGATATTAGAATTG+TGG | - | chr1_4:46839067-46839086 | None:intergenic | 20.0% |
| !!! | AACAAATTTGGAATATATTC+AGG | + | chr1_4:46839476-46839495 | Msa0165970:intron | 20.0% |
| !! | AACATTATATGGAGAATAAT+GGG | + | chr1_4:46840488-46840507 | Msa0165970:CDS | 20.0% |
| !!! | CATATAGAGAAATTTTATGT+TGG | + | chr1_4:46840786-46840805 | Msa0165970:three_prime_UTR | 20.0% |
| !! | TATAGAGATAAATATTAGAC+TGG | + | chr1_4:46840827-46840846 | Msa0165970:three_prime_UTR | 20.0% |
| ! | AGGAATATTGAATATGCTAT+TGG | - | chr1_4:46839171-46839190 | None:intergenic | 25.0% |
| ! | AATAGCATATTCAATATTCC+TGG | + | chr1_4:46839170-46839189 | Msa0165970:intron | 25.0% |
| ! | CAATTTCTCTTGCAATTTAA+CGG | - | chr1_4:46839564-46839583 | None:intergenic | 25.0% |
| !!! | TTTTTTTTGGTGGAAAAAGA+GGG | - | chr1_4:46839853-46839872 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTGGTGGAAAAAG+AGG | - | chr1_4:46839854-46839873 | None:intergenic | 25.0% |
| ! | AGAATCATTATGAAGTTCAA+AGG | + | chr1_4:46839958-46839977 | Msa0165970:CDS | 25.0% |
| ! | TTATTAAACAGGAGTTGAAA+CGG | + | chr1_4:46840108-46840127 | Msa0165970:intron | 25.0% |
| ! | TGAAAAGAAAGAGAAAGAAA+AGG | + | chr1_4:46840282-46840301 | Msa0165970:CDS | 25.0% |
| ! | TGACCTTCATAATAATACAT+CGG | - | chr1_4:46840397-46840416 | None:intergenic | 25.0% |
| ! | CAACATTATATGGAGAATAA+TGG | + | chr1_4:46840487-46840506 | Msa0165970:CDS | 25.0% |
| ! | TATATGAATATGAATCATGG+TGG | + | chr1_4:46840511-46840530 | Msa0165970:CDS | 25.0% |
| ! | AGGAATATTGAATATGCTAT+TGG | - | chr1_4:46839171-46839190 | None:intergenic | 25.0% |
| ! | AATAGCATATTCAATATTCC+TGG | + | chr1_4:46839170-46839189 | Msa0165970:intron | 25.0% |
| ! | CAATTTCTCTTGCAATTTAA+CGG | - | chr1_4:46839564-46839583 | None:intergenic | 25.0% |
| !!! | TTTTTTTTGGTGGAAAAAGA+GGG | - | chr1_4:46839853-46839872 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTGGTGGAAAAAG+AGG | - | chr1_4:46839854-46839873 | None:intergenic | 25.0% |
| ! | AGAATCATTATGAAGTTCAA+AGG | + | chr1_4:46839958-46839977 | Msa0165970:CDS | 25.0% |
| ! | TTATTAAACAGGAGTTGAAA+CGG | + | chr1_4:46840108-46840127 | Msa0165970:intron | 25.0% |
| ! | TGAAAAGAAAGAGAAAGAAA+AGG | + | chr1_4:46840282-46840301 | Msa0165970:CDS | 25.0% |
| ! | TGACCTTCATAATAATACAT+CGG | - | chr1_4:46840397-46840416 | None:intergenic | 25.0% |
| ! | CAACATTATATGGAGAATAA+TGG | + | chr1_4:46840487-46840506 | Msa0165970:CDS | 25.0% |
| ! | TATATGAATATGAATCATGG+TGG | + | chr1_4:46840511-46840530 | Msa0165970:CDS | 25.0% |
| TATATAACCAATGAAACGGT+GGG | - | chr1_4:46838977-46838996 | None:intergenic | 30.0% | |
| ATATATAACCAATGAAACGG+TGG | - | chr1_4:46838978-46838997 | None:intergenic | 30.0% | |
| ! | AGATTTTGTGTTTGAAGAGT+GGG | - | chr1_4:46839025-46839044 | None:intergenic | 30.0% |
| ! | AAGATTTTGTGTTTGAAGAG+TGG | - | chr1_4:46839026-46839045 | None:intergenic | 30.0% |
| ! | ATATTAGAATTGTGGTGTTG+TGG | - | chr1_4:46839059-46839078 | None:intergenic | 30.0% |
| ACACAAAAAGGAAATATTCC+AGG | - | chr1_4:46839191-46839210 | None:intergenic | 30.0% | |
| GAAAACAACAACACACAAAA+AGG | - | chr1_4:46839203-46839222 | None:intergenic | 30.0% | |
| CGTTAAATTGCAAGAGAAAT+TGG | + | chr1_4:46839562-46839581 | Msa0165970:CDS | 30.0% | |
| !!! | TCTTTAGGTTTTTTCTCTTC+AGG | - | chr1_4:46839731-46839750 | None:intergenic | 30.0% |
| TGAAGAGAAAAAACCTAAAG+AGG | + | chr1_4:46839730-46839749 | Msa0165970:CDS | 30.0% | |
| ! | TATTAATTTTCAGAGTACGG+TGG | + | chr1_4:46839888-46839907 | Msa0165970:intron | 30.0% |
| GGCTAATGATGTTATTAAAC+AGG | + | chr1_4:46840097-46840116 | Msa0165970:intron | 30.0% | |
| AGATACTCTATCAAATCCTT+TGG | - | chr1_4:46840184-46840203 | None:intergenic | 30.0% | |
| TTCTTCTCTTCTTCTTTCTT+AGG | - | chr1_4:46840244-46840263 | None:intergenic | 30.0% | |
| AGAAGAGAAGAAAGAAAAAG+AGG | + | chr1_4:46840252-46840271 | Msa0165970:CDS | 30.0% | |
| GAAGAGAAGAAAGAAAAAGA+GGG | + | chr1_4:46840253-46840272 | Msa0165970:CDS | 30.0% | |
| AAAGAAAGAGAAAGAAAAGG+CGG | + | chr1_4:46840285-46840304 | Msa0165970:CDS | 30.0% | |
| ATCAATTTCATCATCAACCT+GGG | + | chr1_4:46840440-46840459 | Msa0165970:CDS | 30.0% | |
| GGGTATATGAATATGAATCA+TGG | + | chr1_4:46840508-46840527 | Msa0165970:CDS | 30.0% | |
| TTATTAGGGTGCATGTAATA+CGG | - | chr1_4:46840565-46840584 | None:intergenic | 30.0% | |
| ! | TTCTTTTTCTCTTCCAAATC+TGG | - | chr1_4:46840876-46840895 | None:intergenic | 30.0% |
| TATATAACCAATGAAACGGT+GGG | - | chr1_4:46838977-46838996 | None:intergenic | 30.0% | |
| ATATATAACCAATGAAACGG+TGG | - | chr1_4:46838978-46838997 | None:intergenic | 30.0% | |
| ! | AGATTTTGTGTTTGAAGAGT+GGG | - | chr1_4:46839025-46839044 | None:intergenic | 30.0% |
| ! | AAGATTTTGTGTTTGAAGAG+TGG | - | chr1_4:46839026-46839045 | None:intergenic | 30.0% |
| ! | ATATTAGAATTGTGGTGTTG+TGG | - | chr1_4:46839059-46839078 | None:intergenic | 30.0% |
| ACACAAAAAGGAAATATTCC+AGG | - | chr1_4:46839191-46839210 | None:intergenic | 30.0% | |
| GAAAACAACAACACACAAAA+AGG | - | chr1_4:46839203-46839222 | None:intergenic | 30.0% | |
| CGTTAAATTGCAAGAGAAAT+TGG | + | chr1_4:46839562-46839581 | Msa0165970:CDS | 30.0% | |
| !!! | TCTTTAGGTTTTTTCTCTTC+AGG | - | chr1_4:46839731-46839750 | None:intergenic | 30.0% |
| TGAAGAGAAAAAACCTAAAG+AGG | + | chr1_4:46839730-46839749 | Msa0165970:CDS | 30.0% | |
| ! | TATTAATTTTCAGAGTACGG+TGG | + | chr1_4:46839888-46839907 | Msa0165970:intron | 30.0% |
| GGCTAATGATGTTATTAAAC+AGG | + | chr1_4:46840097-46840116 | Msa0165970:intron | 30.0% | |
| AGATACTCTATCAAATCCTT+TGG | - | chr1_4:46840184-46840203 | None:intergenic | 30.0% | |
| TTCTTCTCTTCTTCTTTCTT+AGG | - | chr1_4:46840244-46840263 | None:intergenic | 30.0% | |
| AGAAGAGAAGAAAGAAAAAG+AGG | + | chr1_4:46840252-46840271 | Msa0165970:CDS | 30.0% | |
| GAAGAGAAGAAAGAAAAAGA+GGG | + | chr1_4:46840253-46840272 | Msa0165970:CDS | 30.0% | |
| AAAGAAAGAGAAAGAAAAGG+CGG | + | chr1_4:46840285-46840304 | Msa0165970:CDS | 30.0% | |
| ATCAATTTCATCATCAACCT+GGG | + | chr1_4:46840440-46840459 | Msa0165970:CDS | 30.0% | |
| GGGTATATGAATATGAATCA+TGG | + | chr1_4:46840508-46840527 | Msa0165970:CDS | 30.0% | |
| TTATTAGGGTGCATGTAATA+CGG | - | chr1_4:46840565-46840584 | None:intergenic | 30.0% | |
| ! | TTCTTTTTCTCTTCCAAATC+TGG | - | chr1_4:46840876-46840895 | None:intergenic | 30.0% |
| ! | GATTTTGTGTTTGAAGAGTG+GGG | - | chr1_4:46839024-46839043 | None:intergenic | 35.0% |
| CTATTACCAATCACACACAT+GGG | + | chr1_4:46839089-46839108 | Msa0165970:exon | 35.0% | |
| AAGTCGAGTTTGTAAACAAC+AGG | - | chr1_4:46839336-46839355 | None:intergenic | 35.0% | |
| AAACTCGACTTACATTGTGA+AGG | + | chr1_4:46839345-46839364 | Msa0165970:CDS | 35.0% | |
| TGAAGCTAGATCTGCTTTAA+CGG | - | chr1_4:46839510-46839529 | None:intergenic | 35.0% | |
| TCAAACAAAGTGACAGTTAC+CGG | + | chr1_4:46839527-46839546 | Msa0165970:CDS | 35.0% | |
| TTTAACGGCGTCAAATTTAC+CGG | - | chr1_4:46839549-46839568 | None:intergenic | 35.0% | |
| AAAATCCGACGAGAAAAAAC+CGG | + | chr1_4:46839664-46839683 | Msa0165970:CDS | 35.0% | |
| !!! | TCTTCAGGTTTTTTCTCTTC+AGG | - | chr1_4:46839716-46839735 | None:intergenic | 35.0% |
| ! | AAGGATTTGGTAACAGTGAA+AGG | + | chr1_4:46840148-46840167 | Msa0165970:CDS | 35.0% |
| TTCTCTTCTTCTTTCTTAGG+TGG | - | chr1_4:46840241-46840260 | None:intergenic | 35.0% | |
| GAAGAAAGAAGAGAAGAAAG+TGG | + | chr1_4:46840309-46840328 | Msa0165970:CDS | 35.0% | |
| AAAGAAGAGAAGAAAGTGGA+CGG | + | chr1_4:46840313-46840332 | Msa0165970:CDS | 35.0% | |
| GAAGGTGGAGGTTAATAAAA+TGG | + | chr1_4:46840348-46840367 | Msa0165970:CDS | 35.0% | |
| TAATACATCGGAGCTTGTAT+CGG | - | chr1_4:46840385-46840404 | None:intergenic | 35.0% | |
| GCTCCGATGTATTATTATGA+AGG | + | chr1_4:46840391-46840410 | Msa0165970:CDS | 35.0% | |
| AAGTAGTAACTATGCTGGTA+TGG | + | chr1_4:46840417-46840436 | Msa0165970:CDS | 35.0% | |
| GATCAATTTCATCATCAACC+TGG | + | chr1_4:46840439-46840458 | Msa0165970:CDS | 35.0% | |
| ATGAATATGAATCATGGTGG+TGG | + | chr1_4:46840514-46840533 | Msa0165970:CDS | 35.0% | |
| CACATAAGAGAACAAGCATT+GGG | - | chr1_4:46840619-46840638 | None:intergenic | 35.0% | |
| TCACATAAGAGAACAAGCAT+TGG | - | chr1_4:46840620-46840639 | None:intergenic | 35.0% | |
| AGTGTGTATACACTTATGCA+CGG | + | chr1_4:46840655-46840674 | Msa0165970:three_prime_UTR | 35.0% | |
| ! | GATTTTGTGTTTGAAGAGTG+GGG | - | chr1_4:46839024-46839043 | None:intergenic | 35.0% |
| CTATTACCAATCACACACAT+GGG | + | chr1_4:46839089-46839108 | Msa0165970:exon | 35.0% | |
| AAGTCGAGTTTGTAAACAAC+AGG | - | chr1_4:46839336-46839355 | None:intergenic | 35.0% | |
| AAACTCGACTTACATTGTGA+AGG | + | chr1_4:46839345-46839364 | Msa0165970:CDS | 35.0% | |
| TGAAGCTAGATCTGCTTTAA+CGG | - | chr1_4:46839510-46839529 | None:intergenic | 35.0% | |
| TCAAACAAAGTGACAGTTAC+CGG | + | chr1_4:46839527-46839546 | Msa0165970:CDS | 35.0% | |
| TTTAACGGCGTCAAATTTAC+CGG | - | chr1_4:46839549-46839568 | None:intergenic | 35.0% | |
| AAAATCCGACGAGAAAAAAC+CGG | + | chr1_4:46839664-46839683 | Msa0165970:CDS | 35.0% | |
| !!! | TCTTCAGGTTTTTTCTCTTC+AGG | - | chr1_4:46839716-46839735 | None:intergenic | 35.0% |
| ! | AAGGATTTGGTAACAGTGAA+AGG | + | chr1_4:46840148-46840167 | Msa0165970:CDS | 35.0% |
| TTCTCTTCTTCTTTCTTAGG+TGG | - | chr1_4:46840241-46840260 | None:intergenic | 35.0% | |
| GAAGAAAGAAGAGAAGAAAG+TGG | + | chr1_4:46840309-46840328 | Msa0165970:CDS | 35.0% | |
| AAAGAAGAGAAGAAAGTGGA+CGG | + | chr1_4:46840313-46840332 | Msa0165970:CDS | 35.0% | |
| GAAGGTGGAGGTTAATAAAA+TGG | + | chr1_4:46840348-46840367 | Msa0165970:CDS | 35.0% | |
| TAATACATCGGAGCTTGTAT+CGG | - | chr1_4:46840385-46840404 | None:intergenic | 35.0% | |
| GCTCCGATGTATTATTATGA+AGG | + | chr1_4:46840391-46840410 | Msa0165970:CDS | 35.0% | |
| AAGTAGTAACTATGCTGGTA+TGG | + | chr1_4:46840417-46840436 | Msa0165970:CDS | 35.0% | |
| GATCAATTTCATCATCAACC+TGG | + | chr1_4:46840439-46840458 | Msa0165970:CDS | 35.0% | |
| ATGAATATGAATCATGGTGG+TGG | + | chr1_4:46840514-46840533 | Msa0165970:CDS | 35.0% | |
| CACATAAGAGAACAAGCATT+GGG | - | chr1_4:46840619-46840638 | None:intergenic | 35.0% | |
| TCACATAAGAGAACAAGCAT+TGG | - | chr1_4:46840620-46840639 | None:intergenic | 35.0% | |
| AGTGTGTATACACTTATGCA+CGG | + | chr1_4:46840655-46840674 | Msa0165970:three_prime_UTR | 35.0% | |
| ! | CCATGTGTGTGATTGGTAAT+AGG | - | chr1_4:46839091-46839110 | None:intergenic | 40.0% |
| CCTATTACCAATCACACACA+TGG | + | chr1_4:46839088-46839107 | Msa0165970:exon | 40.0% | |
| TCCTTCATCAGCTTTCTTCT+CGG | - | chr1_4:46839277-46839296 | None:intergenic | 40.0% | |
| AGTTTGTAAACAACAGGAGC+AGG | - | chr1_4:46839330-46839349 | None:intergenic | 40.0% | |
| AAGATCAGATTGCACTGTGA+CGG | + | chr1_4:46839916-46839935 | Msa0165970:CDS | 40.0% | |
| GGTAACAGTGAAAGGAACAA+TGG | + | chr1_4:46840156-46840175 | Msa0165970:CDS | 40.0% | |
| GAAAGGAACAATGGAACCAA+AGG | + | chr1_4:46840165-46840184 | Msa0165970:CDS | 40.0% | |
| GAGAAGAAAGAAAAAGAGGG+TGG | + | chr1_4:46840256-46840275 | Msa0165970:CDS | 40.0% | |
| AAGAAAGAAAAAGAGGGTGG+AGG | + | chr1_4:46840259-46840278 | Msa0165970:CDS | 40.0% | |
| GGTCAAAGTAGTAACTATGC+TGG | + | chr1_4:46840412-46840431 | Msa0165970:CDS | 40.0% | |
| TTTCATCATCAACCTGGGTA+TGG | + | chr1_4:46840445-46840464 | Msa0165970:CDS | 40.0% | |
| ATGTAATACGGTACTTGAGG+TGG | - | chr1_4:46840553-46840572 | None:intergenic | 40.0% | |
| TGCATGTAATACGGTACTTG+AGG | - | chr1_4:46840556-46840575 | None:intergenic | 40.0% | |
| !! | TCTGAGGAGGTGGATTATTA+GGG | - | chr1_4:46840579-46840598 | None:intergenic | 40.0% |
| !! | ATCTGAGGAGGTGGATTATT+AGG | - | chr1_4:46840580-46840599 | None:intergenic | 40.0% |
| TTCTCATCACTGAACATCTG+AGG | - | chr1_4:46840595-46840614 | None:intergenic | 40.0% | |
| ! | AAATATTAGACTGGCTCAGC+TGG | + | chr1_4:46840836-46840855 | Msa0165970:three_prime_UTR | 40.0% |
| TTTCTCTTCCAAATCTGGAC+AGG | - | chr1_4:46840871-46840890 | None:intergenic | 40.0% | |
| ! | CCATGTGTGTGATTGGTAAT+AGG | - | chr1_4:46839091-46839110 | None:intergenic | 40.0% |
| CCTATTACCAATCACACACA+TGG | + | chr1_4:46839088-46839107 | Msa0165970:exon | 40.0% | |
| TCCTTCATCAGCTTTCTTCT+CGG | - | chr1_4:46839277-46839296 | None:intergenic | 40.0% | |
| AGTTTGTAAACAACAGGAGC+AGG | - | chr1_4:46839330-46839349 | None:intergenic | 40.0% | |
| AAGATCAGATTGCACTGTGA+CGG | + | chr1_4:46839916-46839935 | Msa0165970:CDS | 40.0% | |
| GGTAACAGTGAAAGGAACAA+TGG | + | chr1_4:46840156-46840175 | Msa0165970:CDS | 40.0% | |
| GAAAGGAACAATGGAACCAA+AGG | + | chr1_4:46840165-46840184 | Msa0165970:CDS | 40.0% | |
| GAGAAGAAAGAAAAAGAGGG+TGG | + | chr1_4:46840256-46840275 | Msa0165970:CDS | 40.0% | |
| AAGAAAGAAAAAGAGGGTGG+AGG | + | chr1_4:46840259-46840278 | Msa0165970:CDS | 40.0% | |
| GGTCAAAGTAGTAACTATGC+TGG | + | chr1_4:46840412-46840431 | Msa0165970:CDS | 40.0% | |
| TTTCATCATCAACCTGGGTA+TGG | + | chr1_4:46840445-46840464 | Msa0165970:CDS | 40.0% | |
| ATGTAATACGGTACTTGAGG+TGG | - | chr1_4:46840553-46840572 | None:intergenic | 40.0% | |
| TGCATGTAATACGGTACTTG+AGG | - | chr1_4:46840556-46840575 | None:intergenic | 40.0% | |
| !! | TCTGAGGAGGTGGATTATTA+GGG | - | chr1_4:46840579-46840598 | None:intergenic | 40.0% |
| !! | ATCTGAGGAGGTGGATTATT+AGG | - | chr1_4:46840580-46840599 | None:intergenic | 40.0% |
| TTCTCATCACTGAACATCTG+AGG | - | chr1_4:46840595-46840614 | None:intergenic | 40.0% | |
| ! | AAATATTAGACTGGCTCAGC+TGG | + | chr1_4:46840836-46840855 | Msa0165970:three_prime_UTR | 40.0% |
| TTTCTCTTCCAAATCTGGAC+AGG | - | chr1_4:46840871-46840890 | None:intergenic | 40.0% | |
| !! | GTGAGGTAATGGGATTGGTT+AGG | - | chr1_4:46838955-46838974 | None:intergenic | 45.0% |
| ! | GAGTGGGGAGAGAAGTATAA+GGG | - | chr1_4:46839009-46839028 | None:intergenic | 45.0% |
| ! | AGAGTGGGGAGAGAAGTATA+AGG | - | chr1_4:46839010-46839029 | None:intergenic | 45.0% |
| ACCGAGAAGAAAGCTGATGA+AGG | + | chr1_4:46839273-46839292 | Msa0165970:CDS | 45.0% | |
| GGCTGAGAAAGCTAAGAAGA+AGG | + | chr1_4:46839583-46839602 | Msa0165970:CDS | 45.0% | |
| !!! | TTTTTTCTCCGCCGGTTTCT+CGG | - | chr1_4:46839648-46839667 | None:intergenic | 45.0% |
| CCAAATCCTTGTCTCCATCT+AGG | - | chr1_4:46840138-46840157 | None:intergenic | 45.0% | |
| CCTAGATGGAGACAAGGATT+TGG | + | chr1_4:46840135-46840154 | Msa0165970:CDS | 45.0% | |
| TTATAACCACCACCATACCC+AGG | - | chr1_4:46840460-46840479 | None:intergenic | 45.0% | |
| TCATCACTGAACATCTGAGG+AGG | - | chr1_4:46840592-46840611 | None:intergenic | 45.0% | |
| TGGAGAATCCTGTCCAGATT+TGG | + | chr1_4:46840860-46840879 | Msa0165970:three_prime_UTR | 45.0% | |
| !! | GTGAGGTAATGGGATTGGTT+AGG | - | chr1_4:46838955-46838974 | None:intergenic | 45.0% |
| ! | GAGTGGGGAGAGAAGTATAA+GGG | - | chr1_4:46839009-46839028 | None:intergenic | 45.0% |
| ! | AGAGTGGGGAGAGAAGTATA+AGG | - | chr1_4:46839010-46839029 | None:intergenic | 45.0% |
| ACCGAGAAGAAAGCTGATGA+AGG | + | chr1_4:46839273-46839292 | Msa0165970:CDS | 45.0% | |
| GGCTGAGAAAGCTAAGAAGA+AGG | + | chr1_4:46839583-46839602 | Msa0165970:CDS | 45.0% | |
| !!! | TTTTTTCTCCGCCGGTTTCT+CGG | - | chr1_4:46839648-46839667 | None:intergenic | 45.0% |
| CCAAATCCTTGTCTCCATCT+AGG | - | chr1_4:46840138-46840157 | None:intergenic | 45.0% | |
| CCTAGATGGAGACAAGGATT+TGG | + | chr1_4:46840135-46840154 | Msa0165970:CDS | 45.0% | |
| TTATAACCACCACCATACCC+AGG | - | chr1_4:46840460-46840479 | None:intergenic | 45.0% | |
| TCATCACTGAACATCTGAGG+AGG | - | chr1_4:46840592-46840611 | None:intergenic | 45.0% | |
| TGGAGAATCCTGTCCAGATT+TGG | + | chr1_4:46840860-46840879 | Msa0165970:three_prime_UTR | 45.0% | |
| !!! | TTTTAAAATATTAATGAATT+AGG | - | chr1_4:46840015-46840034 | None:intergenic | 5.0% |
| !! | TAATTAATTAATTGTTAATT+TGG | + | chr1_4:46840073-46840092 | Msa0165970:intron | 5.0% |
| !!! | TTTTAAAATATTAATGAATT+AGG | - | chr1_4:46840015-46840034 | None:intergenic | 5.0% |
| !! | TAATTAATTAATTGTTAATT+TGG | + | chr1_4:46840073-46840092 | Msa0165970:intron | 5.0% |
| GAAACGGTGGGTGAGGTAAT+GGG | - | chr1_4:46838965-46838984 | None:intergenic | 50.0% | |
| TGAAACGGTGGGTGAGGTAA+TGG | - | chr1_4:46838966-46838985 | None:intergenic | 50.0% | |
| TACCTCACCCACCGTTTCAT+TGG | + | chr1_4:46838967-46838986 | Msa0165970:five_prime_UTR | 50.0% | |
| AACCAATGAAACGGTGGGTG+AGG | - | chr1_4:46838972-46838991 | None:intergenic | 50.0% | |
| ! | GGGAGAGAAGTATAAGGGAG+AGG | - | chr1_4:46839004-46839023 | None:intergenic | 50.0% |
| ACCAATCACACACATGGGAG+AGG | + | chr1_4:46839094-46839113 | Msa0165970:exon | 50.0% | |
| ACCTCTCCCATGTGTGTGAT+TGG | - | chr1_4:46839098-46839117 | None:intergenic | 50.0% | |
| TAAACAACAGGAGCAGGAGC+AGG | - | chr1_4:46839324-46839343 | None:intergenic | 50.0% | |
| !!! | TCGTCGGATTTTTTCTCCGC+CGG | - | chr1_4:46839656-46839675 | None:intergenic | 50.0% |
| ATCCGACGAGAAAAAACCGG+AGG | + | chr1_4:46839667-46839686 | Msa0165970:CDS | 50.0% | |
| !!! | CTCCTCCGGTTTTTTCTCGT+CGG | - | chr1_4:46839672-46839691 | None:intergenic | 50.0% |
| TCCTCAGCTTTCTTCTCCTC+CGG | - | chr1_4:46839686-46839705 | None:intergenic | 50.0% | |
| GTTGAAACGGCGAACCTAGA+TGG | + | chr1_4:46840121-46840140 | Msa0165970:CDS | 50.0% | |
| GAAGAGAAGAAAGTGGACGG+TGG | + | chr1_4:46840316-46840335 | Msa0165970:CDS | 50.0% | |
| CATCATCAACCTGGGTATGG+TGG | + | chr1_4:46840448-46840467 | Msa0165970:CDS | 50.0% | |
| TCACTGAACATCTGAGGAGG+TGG | - | chr1_4:46840589-46840608 | None:intergenic | 50.0% | |
| GAAACGGTGGGTGAGGTAAT+GGG | - | chr1_4:46838965-46838984 | None:intergenic | 50.0% | |
| TGAAACGGTGGGTGAGGTAA+TGG | - | chr1_4:46838966-46838985 | None:intergenic | 50.0% | |
| TACCTCACCCACCGTTTCAT+TGG | + | chr1_4:46838967-46838986 | Msa0165970:five_prime_UTR | 50.0% | |
| AACCAATGAAACGGTGGGTG+AGG | - | chr1_4:46838972-46838991 | None:intergenic | 50.0% | |
| ! | GGGAGAGAAGTATAAGGGAG+AGG | - | chr1_4:46839004-46839023 | None:intergenic | 50.0% |
| ACCAATCACACACATGGGAG+AGG | + | chr1_4:46839094-46839113 | Msa0165970:exon | 50.0% | |
| ACCTCTCCCATGTGTGTGAT+TGG | - | chr1_4:46839098-46839117 | None:intergenic | 50.0% | |
| TAAACAACAGGAGCAGGAGC+AGG | - | chr1_4:46839324-46839343 | None:intergenic | 50.0% | |
| !!! | TCGTCGGATTTTTTCTCCGC+CGG | - | chr1_4:46839656-46839675 | None:intergenic | 50.0% |
| ATCCGACGAGAAAAAACCGG+AGG | + | chr1_4:46839667-46839686 | Msa0165970:CDS | 50.0% | |
| !!! | CTCCTCCGGTTTTTTCTCGT+CGG | - | chr1_4:46839672-46839691 | None:intergenic | 50.0% |
| TCCTCAGCTTTCTTCTCCTC+CGG | - | chr1_4:46839686-46839705 | None:intergenic | 50.0% | |
| GTTGAAACGGCGAACCTAGA+TGG | + | chr1_4:46840121-46840140 | Msa0165970:CDS | 50.0% | |
| GAAGAGAAGAAAGTGGACGG+TGG | + | chr1_4:46840316-46840335 | Msa0165970:CDS | 50.0% | |
| CATCATCAACCTGGGTATGG+TGG | + | chr1_4:46840448-46840467 | Msa0165970:CDS | 50.0% | |
| TCACTGAACATCTGAGGAGG+TGG | - | chr1_4:46840589-46840608 | None:intergenic | 50.0% | |
| !! | GGTGGGTGAGGTAATGGGAT+TGG | - | chr1_4:46838960-46838979 | None:intergenic | 55.0% |
| ! | CGAAGTGCTCGTCATTTCGC+TGG | + | chr1_4:46839387-46839406 | Msa0165970:CDS | 55.0% |
| CCACCGCCAAAAAAAGACGC+CGG | + | chr1_4:46839620-46839639 | Msa0165970:CDS | 55.0% | |
| !!! | GCTCCGGCGTCTTTTTTTGG+CGG | - | chr1_4:46839626-46839645 | None:intergenic | 55.0% |
| !!! | TCGGCTCCGGCGTCTTTTTT+TGG | - | chr1_4:46839629-46839648 | None:intergenic | 55.0% |
| ACCGGAGGAGAAGAAAGCTG+AGG | + | chr1_4:46839682-46839701 | Msa0165970:CDS | 55.0% | |
| GGCGAACCTAGATGGAGACA+AGG | + | chr1_4:46840129-46840148 | Msa0165970:CDS | 55.0% | |
| GAAAGTGGACGGTGGAGATG+CGG | + | chr1_4:46840324-46840343 | Msa0165970:CDS | 55.0% | |
| CATCAACCTGGGTATGGTGG+TGG | + | chr1_4:46840451-46840470 | Msa0165970:CDS | 55.0% | |
| GGTACTTGAGGTGGCTGCAT+AGG | - | chr1_4:46840544-46840563 | None:intergenic | 55.0% | |
| ! | ATTAGACTGGCTCAGCTGGC+TGG | + | chr1_4:46840840-46840859 | Msa0165970:three_prime_UTR | 55.0% |
| !! | GGTGGGTGAGGTAATGGGAT+TGG | - | chr1_4:46838960-46838979 | None:intergenic | 55.0% |
| ! | CGAAGTGCTCGTCATTTCGC+TGG | + | chr1_4:46839387-46839406 | Msa0165970:CDS | 55.0% |
| CCACCGCCAAAAAAAGACGC+CGG | + | chr1_4:46839620-46839639 | Msa0165970:CDS | 55.0% | |
| !!! | GCTCCGGCGTCTTTTTTTGG+CGG | - | chr1_4:46839626-46839645 | None:intergenic | 55.0% |
| !!! | TCGGCTCCGGCGTCTTTTTT+TGG | - | chr1_4:46839629-46839648 | None:intergenic | 55.0% |
| ACCGGAGGAGAAGAAAGCTG+AGG | + | chr1_4:46839682-46839701 | Msa0165970:CDS | 55.0% | |
| GGCGAACCTAGATGGAGACA+AGG | + | chr1_4:46840129-46840148 | Msa0165970:CDS | 55.0% | |
| GAAAGTGGACGGTGGAGATG+CGG | + | chr1_4:46840324-46840343 | Msa0165970:CDS | 55.0% | |
| CATCAACCTGGGTATGGTGG+TGG | + | chr1_4:46840451-46840470 | Msa0165970:CDS | 55.0% | |
| GGTACTTGAGGTGGCTGCAT+AGG | - | chr1_4:46840544-46840563 | None:intergenic | 55.0% | |
| ! | ATTAGACTGGCTCAGCTGGC+TGG | + | chr1_4:46840840-46840859 | Msa0165970:three_prime_UTR | 55.0% |
| ACAGGAGCAGGAGCAGGAAC+AGG | - | chr1_4:46839318-46839337 | None:intergenic | 60.0% | |
| !!! | CCGGCGTCTTTTTTTGGCGG+TGG | - | chr1_4:46839623-46839642 | None:intergenic | 60.0% |
| ACAGGAGCAGGAGCAGGAAC+AGG | - | chr1_4:46839318-46839337 | None:intergenic | 60.0% | |
| !!! | CCGGCGTCTTTTTTTGGCGG+TGG | - | chr1_4:46839623-46839642 | None:intergenic | 60.0% |
| AGACGCCGGAGCCGAGAAAC+CGG | + | chr1_4:46839634-46839653 | Msa0165970:CDS | 65.0% | |
| TGGAGATGCGGCGAAGGTGG+AGG | + | chr1_4:46840336-46840355 | Msa0165970:CDS | 65.0% | |
| AGACGCCGGAGCCGAGAAAC+CGG | + | chr1_4:46839634-46839653 | Msa0165970:CDS | 65.0% | |
| TGGAGATGCGGCGAAGGTGG+AGG | + | chr1_4:46840336-46840355 | Msa0165970:CDS | 65.0% | |
| !! | CTCCGCCGGTTTCTCGGCTC+CGG | - | chr1_4:46839642-46839661 | None:intergenic | 70.0% |
| GGACGGTGGAGATGCGGCGA+AGG | + | chr1_4:46840330-46840349 | Msa0165970:CDS | 70.0% | |
| CGGTGGAGATGCGGCGAAGG+TGG | + | chr1_4:46840333-46840352 | Msa0165970:CDS | 70.0% | |
| !! | CTCCGCCGGTTTCTCGGCTC+CGG | - | chr1_4:46839642-46839661 | None:intergenic | 70.0% |
| GGACGGTGGAGATGCGGCGA+AGG | + | chr1_4:46840330-46840349 | Msa0165970:CDS | 70.0% | |
| CGGTGGAGATGCGGCGAAGG+TGG | + | chr1_4:46840333-46840352 | Msa0165970:CDS | 70.0% | |
| CGCCGGAGCCGAGAAACCGG+CGG | + | chr1_4:46839637-46839656 | Msa0165970:CDS | 75.0% | |
| CGCCGGAGCCGAGAAACCGG+CGG | + | chr1_4:46839637-46839656 | Msa0165970:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 46838952 | 46841024 | 46838952 | ID=Msa0165970;Name=Msa0165970 |
| chr1_4 | mRNA | 46838952 | 46841024 | 46838952 | ID=Msa0165970-mRNA-1;Parent=Msa0165970;Name=Msa0165970-mRNA-1;_AED=0.03;_eAED=0.03;_QI=155|1|1|1|1|1|5|385|336 |
| chr1_4 | exon | 46838952 | 46839115 | 46838952 | ID=Msa0165970-mRNA-1:exon:13473;Parent=Msa0165970-mRNA-1 |
| chr1_4 | exon | 46839261 | 46839408 | 46839261 | ID=Msa0165970-mRNA-1:exon:13474;Parent=Msa0165970-mRNA-1 |
| chr1_4 | exon | 46839498 | 46839751 | 46839498 | ID=Msa0165970-mRNA-1:exon:13475;Parent=Msa0165970-mRNA-1 |
| chr1_4 | exon | 46839901 | 46839979 | 46839901 | ID=Msa0165970-mRNA-1:exon:13476;Parent=Msa0165970-mRNA-1 |
| chr1_4 | exon | 46840119 | 46841024 | 46840119 | ID=Msa0165970-mRNA-1:exon:13477;Parent=Msa0165970-mRNA-1 |
| chr1_4 | five_prime_UTR | 46838952 | 46839106 | 46838952 | ID=Msa0165970-mRNA-1:five_prime_utr;Parent=Msa0165970-mRNA-1 |
| chr1_4 | CDS | 46839107 | 46839115 | 46839107 | ID=Msa0165970-mRNA-1:cds;Parent=Msa0165970-mRNA-1 |
| chr1_4 | CDS | 46839261 | 46839408 | 46839261 | ID=Msa0165970-mRNA-1:cds;Parent=Msa0165970-mRNA-1 |
| chr1_4 | CDS | 46839498 | 46839751 | 46839498 | ID=Msa0165970-mRNA-1:cds;Parent=Msa0165970-mRNA-1 |
| chr1_4 | CDS | 46839901 | 46839979 | 46839901 | ID=Msa0165970-mRNA-1:cds;Parent=Msa0165970-mRNA-1 |
| chr1_4 | CDS | 46840119 | 46840639 | 46840119 | ID=Msa0165970-mRNA-1:cds;Parent=Msa0165970-mRNA-1 |
| chr1_4 | three_prime_UTR | 46840640 | 46841024 | 46840640 | ID=Msa0165970-mRNA-1:three_prime_utr;Parent=Msa0165970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
