AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0957970


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0957970 MtrunA17_Chr6g0475211 88.771 472 52 1 1 471 1 472 0.0 802
Msa0957970 MtrunA17_Chr6g0475211 91.398 93 6 1 532 622 442 534 3.77e-46 171
Msa0957970 MtrunA17_Chr3g0078341 85.805 472 62 3 1 471 1 468 0.0 796
Msa0957970 MtrunA17_Chr3g0078341 91.398 93 6 1 532 622 438 530 6.72e-46 170
Msa0957970 MtrunA17_Chr6g0482641 59.245 265 79 5 140 403 46 282 2.09e-101 310
Msa0957970 MtrunA17_Chr6g0476071 45.581 215 69 7 241 451 3 173 2.64e-45 158
Msa0957970 MtrunA17_Chr6g0476081 69.767 86 25 1 531 616 2 86 6.71e-32 118
Msa0957970 MtrunA17_Chr6g0450581 32.456 228 112 5 217 440 29 218 3.63e-27 112
Msa0957970 MtrunA17_Chr6g0450581 38.732 142 77 3 488 619 166 307 6.48e-18 85.1
Msa0957970 MtrunA17_Chr1g0149081 46.154 117 60 1 335 451 22 135 5.72e-25 100
Msa0957970 MtrunA17_Chr7g0223571 59.091 88 29 2 541 622 1 87 5.93e-24 96.7
Msa0957970 MtrunA17_Chr1g0149091 60.000 75 27 1 542 613 23 97 1.02e-23 95.9
Msa0957970 MtrunA17_Chr1g0149901 61.333 75 26 1 542 613 130 204 1.18e-22 96.7
Msa0957970 MtrunA17_Chr1g0149901 44.231 104 56 1 332 435 20 121 7.24e-19 85.5
Msa0957970 MtrunA17_Chr1g0149891 61.333 75 26 1 542 613 257 331 7.53e-22 97.4
Msa0957970 MtrunA17_Chr1g0149891 41.129 124 64 2 316 432 124 245 2.82e-18 86.7
Msa0957970 MtrunA17_Chr6g0450541 51.807 83 37 1 540 619 7 89 2.61e-21 88.6
Msa0957970 MtrunA17_Chr6g0482631 48.718 117 15 3 541 614 1 115 1.87e-20 87.0
Msa0957970 MtrunA17_Chr1g0159581 49.398 83 39 1 540 619 123 205 9.91e-18 82.0
Msa0957970 MtrunA17_Chr1g0159581 47.619 84 41 2 345 425 30 113 4.68e-15 74.3
Msa0957970 MtrunA17_Chr6g0450531 36.036 111 55 3 321 428 19 116 1.31e-16 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0957970 AT5G51740.1 51.752 371 154 5 105 471 31 380 6.49e-127 381
Msa0957970 AT5G51740.1 71.277 94 23 3 532 622 350 442 8.47e-32 129
Msa0957970 AT5G51740.2 51.752 371 154 5 105 471 74 423 1.54e-126 382
Msa0957970 AT5G51740.2 71.277 94 23 3 532 622 393 485 1.18e-31 129
Msa0957970 AT5G51740.3 53.429 350 139 4 105 451 74 402 3.02e-126 378

Find 142 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAATCTGGGTATTTGAATT+TGG 0.093969 6_3:+70322080 Msa0957970:CDS
TCCTAAGAGGTTAGGGAAAA+TGG 0.112500 6_3:+70322341 Msa0957970:CDS
GCAACCTGGGTATTTGAATT+TGG 0.129028 6_3:+70322173 Msa0957970:CDS
TCTAAAGGTGGTAACTTTAA+TGG 0.151078 6_3:+70322198 Msa0957970:CDS
ATGAGGTTCTTGATGATAAA+TGG 0.155660 6_3:+70322955 Msa0957970:CDS
TGGATTGAATTGGGAGATTT+TGG 0.167567 6_3:+70323040 Msa0957970:CDS
AACAAAGATGCTAGCTTTAA+TGG 0.185230 6_3:+70322105 Msa0957970:CDS
TGTCAAGGTGGTAACTTTAA+TGG 0.209828 6_3:+70322297 Msa0957970:CDS
GCTCTTGAGTTATCTCGTTT+TGG 0.223589 6_3:-70324115 None:intergenic
TAAGGATTTGATATGTTAAT+AGG 0.244723 6_3:+70326091 Msa0957970:three_prime_UTR
CAACCTGGGTATTTGAATTT+GGG 0.256623 6_3:+70322174 Msa0957970:CDS
TTGAGATAAATAAGAATATT+GGG 0.260342 6_3:+70322367 Msa0957970:CDS
TTTGAGATAAATAAGAATAT+TGG 0.272846 6_3:+70322366 Msa0957970:CDS
AAATGCGTTCGCTTCGTATA+AGG 0.273091 6_3:-70322639 None:intergenic
ATCCTAACTCTCACACTTTC+AGG 0.275058 6_3:-70322759 None:intergenic
ATAAATAGTGTGGGAGAAAA+TGG 0.282286 6_3:-70321850 None:intergenic
CAATCTGGGTATTTGAATTT+GGG 0.287113 6_3:+70322081 Msa0957970:CDS
GCAGAGATAGCAACTATTAT+TGG 0.296599 6_3:+70323152 Msa0957970:CDS
CTAAAGGTGGTAACTTTAAT+GGG 0.298124 6_3:+70322199 Msa0957970:CDS
CACATTTGGATGGATTGAAT+TGG 0.299543 6_3:+70323030 Msa0957970:CDS
CGGAGGTGTGTGATTTATAA+AGG 0.308925 6_3:-70321805 None:intergenic
AGCTTCTTCTCCATCTCTTT+CGG 0.314424 6_3:-70322672 None:intergenic
TGTGTATGTAAATGTGAATT+TGG 0.317129 6_3:+70326058 Msa0957970:three_prime_UTR
CCATCCAAATGTGACGTATA+AGG 0.321830 6_3:-70323020 None:intergenic
TGGTGTTGAAGGATTTCTTT+AGG 0.322830 6_3:+70325952 Msa0957970:CDS
TCTTCAATTCCTAAGAGGTT+AGG 0.330856 6_3:+70322333 Msa0957970:CDS
TGGGAAGATAGTCGTGTTTA+CGG 0.331309 6_3:+70323103 Msa0957970:CDS
TTTCTTGGTTCTTTCAATCA+TGG 0.343833 6_3:+70321957 Msa0957970:exon
GACATAGTGTTGACAATATC+AGG 0.345694 6_3:-70323621 None:intergenic
ACACTTTCAGGATGCATTGC+AGG 0.348683 6_3:-70322747 None:intergenic
CTCATTAAAGCTAACACCTT+TGG 0.357141 6_3:-70322397 None:intergenic
AGGATTCTGAAACCAATTCT+TGG 0.360608 6_3:-70322541 None:intergenic
GTCAAGGTGGTAACTTTAAT+GGG 0.361635 6_3:+70322298 Msa0957970:CDS
TCTTCGATTTCTAATAGATT+AGG 0.367132 6_3:+70322234 Msa0957970:CDS
AACCAATTCTTGGGCCCTCT+TGG 0.369695 6_3:-70322531 None:intergenic
AGCCAAGAGGGCCCAAGAAT+TGG 0.371217 6_3:+70322529 Msa0957970:CDS
AAGAAAACGAGCAGAATTAC+TGG 0.372401 6_3:+70325871 Msa0957970:CDS
CTTCAATTCCTAAGAGGTTA+GGG 0.379836 6_3:+70322334 Msa0957970:CDS
ATTGGTATAGTGGTTGGTTC+AGG 0.382197 6_3:+70322576 Msa0957970:CDS
GATTGCAAAATTCTGTTACT+AGG 0.384217 6_3:-70322063 None:intergenic
ACAAAGATGCTAGCTTTAAT+GGG 0.388105 6_3:+70322106 Msa0957970:CDS
CCTAAGAGGTTAGGGAAAAT+GGG 0.389385 6_3:+70322342 Msa0957970:CDS
AAGAGATGGAGAAGAAGCTT+GGG 0.391537 6_3:+70322676 Msa0957970:CDS
AGAGGAAAACTTGTTCTTGA+TGG 0.393320 6_3:+70321991 Msa0957970:CDS
CATCTTCTCAGCACTGTGTC+TGG 0.400313 6_3:-70323544 None:intergenic
GCTTCAGAAAATTCTGTGTT+TGG 0.406389 6_3:+70322855 Msa0957970:CDS
CATCAAGAACCTCATCTTCC+CGG 0.410729 6_3:-70322947 None:intergenic
ACATTTGGATGGATTGAATT+GGG 0.413686 6_3:+70323031 Msa0957970:CDS
GAATTTGGTTTCATTTACTA+AGG 0.415874 6_3:+70326073 Msa0957970:three_prime_UTR
AAGGGAAAGTTGGAGGGAAT+TGG 0.419080 6_3:+70322922 Msa0957970:CDS
GCAACCTTATACGTCACATT+TGG 0.419485 6_3:+70323016 Msa0957970:CDS
TATTTGAATTTGGGTTCTAA+AGG 0.419872 6_3:+70322183 Msa0957970:CDS
GGGAAGATAGTCGTGTTTAC+GGG 0.423649 6_3:+70323104 Msa0957970:CDS
AGAGAAGGACATGGTGTTGA+AGG 0.427494 6_3:+70325941 Msa0957970:CDS
TTTACATACACAGACAAGTA+TGG 0.429888 6_3:-70326047 None:intergenic
ACTGAAAATGAAGGGAAAGT+TGG 0.438682 6_3:+70322912 Msa0957970:CDS
AGGGGAAAGGGGAAGAAGAA+TGG 0.443081 6_3:-70321748 None:intergenic
GGATTCTGAAACCAATTCTT+GGG 0.448277 6_3:-70322540 None:intergenic
GTTGAAGAGAGGGTTGAGTA+AGG 0.449933 6_3:+70322806 Msa0957970:CDS
TGGTTCTTTCAATCATGGCT+TGG 0.451356 6_3:+70321962 Msa0957970:exon
GCATGTTATGATTGGTATAG+TGG 0.453566 6_3:+70322566 Msa0957970:CDS
AGAATTGGTTTCAGAATCCT+AGG 0.453587 6_3:+70322544 Msa0957970:CDS
AATGCAACACTCAGCATGCC+AGG 0.458010 6_3:-70324390 None:intergenic
ACCTAAAGTCTACGAAAAGT+TGG 0.458356 6_3:+70325793 Msa0957970:CDS
TGAGGTTCTTGATGATAAAT+GGG 0.460396 6_3:+70322956 Msa0957970:CDS
TTTGGTGGTGAAGGATCCTA+TGG 0.460965 6_3:+70323058 Msa0957970:CDS
TATTTCGCTACTCATCCATC+TGG 0.461058 6_3:+70325848 Msa0957970:CDS
AGCATGCCAGGGAGGAATGC+CGG 0.463092 6_3:-70324378 None:intergenic
TCATCTCCGGCATTCCTCCC+TGG 0.465548 6_3:+70324372 Msa0957970:CDS
CCTTATACGTCACATTTGGA+TGG 0.466205 6_3:+70323020 Msa0957970:CDS
AATCCTAGGCATGTTATGAT+TGG 0.472024 6_3:+70322558 Msa0957970:CDS
ATCTAAAAGCTTAGAATCGC+CGG 0.472748 6_3:-70325825 None:intergenic
AGAATTACTGGCTCAAGCTC+AGG 0.477979 6_3:+70325883 Msa0957970:CDS
GGTTGCAAAATTCTCGAACT+AGG 0.479881 6_3:-70322156 None:intergenic
AATAATTACCTTCTGGAGAA+AGG 0.480591 6_3:-70323663 None:intergenic
AGAAGATGACAAAGAATATG+TGG 0.484136 6_3:+70323559 Msa0957970:CDS
AAGTTGGAGGGAATTGGCAC+CGG 0.485472 6_3:+70322928 Msa0957970:CDS
AAAGAGATGGAGAAGAAGCT+TGG 0.487235 6_3:+70322675 Msa0957970:CDS
TTGAATTTGGGTTCTAAAGG+TGG 0.488118 6_3:+70322186 Msa0957970:CDS
AATAATAAGAATATTAGAGT+TGG 0.496382 6_3:+70322273 Msa0957970:CDS
TTTACTTGTGAAAGGGGAAA+GGG 0.498033 6_3:-70321760 None:intergenic
GTTATTGATTGAAGCATGAA+AGG 0.505204 6_3:-70321876 None:intergenic
GTTATGATTGGTATAGTGGT+TGG 0.507924 6_3:+70322570 Msa0957970:CDS
CAAGTCCATACAAGGCATCC+AGG 0.512539 6_3:-70324158 None:intergenic
ATCCTGAAAGTGTGAGAGTT+AGG 0.512578 6_3:+70322757 Msa0957970:CDS
AATGCATTGACTGAAAATGA+AGG 0.512873 6_3:+70322903 Msa0957970:CDS
CCTAAAGTCTACGAAAAGTT+GGG 0.514744 6_3:+70325794 Msa0957970:CDS
TTATCGAAGCGTTGAAGAGA+GGG 0.518421 6_3:+70322796 Msa0957970:CDS
AATATTAGAGTTGGTTGTCA+AGG 0.519986 6_3:+70322282 Msa0957970:CDS
TGAAAGGAAGATAAATAGTG+TGG 0.520206 6_3:-70321860 None:intergenic
ATGGTGGCATTTCCTACAGT+TGG 0.526476 6_3:-70326028 None:intergenic
ATAAATGGGTTCAGAAGAGT+AGG 0.531439 6_3:+70322970 Msa0957970:CDS
AGTTGGAGGGAATTGGCACC+GGG 0.532756 6_3:+70322929 Msa0957970:CDS
TTTAGGAGATTAGAGAAAAG+GGG 0.534498 6_3:+70322441 Msa0957970:CDS
TGAGATAAATAAGAATATTG+GGG 0.535578 6_3:+70322368 Msa0957970:CDS
CTGTTGCTGTGTATCATCTC+CGG 0.535740 6_3:+70324359 Msa0957970:CDS
TGCCACACGTGGATCGTAGC+CGG 0.536111 6_3:-70325771 None:intergenic
ATTAGAGTTGGTTGTCAAGG+TGG 0.541340 6_3:+70322285 Msa0957970:CDS
CTTCCCACCAGGTAAGCAAA+AGG 0.542507 6_3:-70323087 None:intergenic
GATAAATAAGAATATTGGGG+TGG 0.543034 6_3:+70322371 Msa0957970:CDS
AATATTGGGGTGGGTTCCAA+AGG 0.550451 6_3:+70322381 Msa0957970:CDS
CTTCTATTAGTTGCATCCGC+CGG 0.553436 6_3:+70325752 Msa0957970:CDS
TACGGCTACCTTTCTCCAGA+AGG 0.558879 6_3:+70323655 Msa0957970:CDS
GAAAATGAAGGGAAAGTTGG+AGG 0.559808 6_3:+70322915 Msa0957970:CDS
GAGCGAGTTTGAGAAGATGA+AGG 0.561104 6_3:+70322701 Msa0957970:CDS
AAGCAAAAGGCATTAACCAT+AGG 0.561244 6_3:-70323074 None:intergenic
ATAAATAAGAATATTGGGGT+GGG 0.563572 6_3:+70322372 Msa0957970:CDS
CAGACAAGTGTTCCAACTGT+AGG 0.567534 6_3:+70326016 Msa0957970:three_prime_UTR
ATACCAATCATAACATGCCT+AGG 0.568681 6_3:-70322561 None:intergenic
GAAATTGAAGCTGATTACAT+TGG 0.569179 6_3:+70325728 Msa0957970:CDS
GGTTGAGTAAGGAGAATGTG+TGG 0.571308 6_3:+70322817 Msa0957970:CDS
GAACCCAAATTCAAATACCC+AGG 0.572752 6_3:-70322177 None:intergenic
CTGTGTTTGGTGAAGAAAGT+GGG 0.573793 6_3:+70322868 Msa0957970:CDS
ACTGGCTCAAGCTCAGGTGA+TGG 0.577941 6_3:+70325889 Msa0957970:CDS
TCTGTGTTTGGTGAAGAAAG+TGG 0.579845 6_3:+70322867 Msa0957970:CDS
GAGTTTGAGAAGATGAAGGC+GGG 0.581578 6_3:+70322705 Msa0957970:CDS
ATTTGAATGTAGTATGAGCA+TGG 0.589277 6_3:+70324031 Msa0957970:intron
ATGCATTGACTGAAAATGAA+GGG 0.590623 6_3:+70322904 Msa0957970:CDS
CATAGTCAGAGGTGTAAACT+CGG 0.597056 6_3:-70324087 None:intergenic
ATTATCGAAGCGTTGAAGAG+AGG 0.605086 6_3:+70322795 Msa0957970:CDS
ATCATGGCTTGGTATAGAAG+AGG 0.608651 6_3:+70321973 Msa0957970:exon
CGAGTTTGAGAAGATGAAGG+CGG 0.609178 6_3:+70322704 Msa0957970:CDS
GAAGATGACAAAGAATATGT+GGG 0.612484 6_3:+70323560 Msa0957970:CDS
GAATTGGCACCGGGAAGATG+AGG 0.612493 6_3:+70322938 Msa0957970:CDS
GAAAGGAAGATAAATAGTGT+GGG 0.616590 6_3:-70321859 None:intergenic
AAAATGAAGGGAAAGTTGGA+GGG 0.619844 6_3:+70322916 Msa0957970:CDS
ACAGCAACAGCATTGTGCAC+AGG 0.621274 6_3:-70324346 None:intergenic
TGATTAGGTTGGACATGCTG+TGG 0.626030 6_3:+70323521 Msa0957970:intron
TTACTTGTGAAAGGGGAAAG+GGG 0.626771 6_3:-70321759 None:intergenic
AACACGACTATCTTCCCACC+AGG 0.637312 6_3:-70323098 None:intergenic
ATGCAACACTCAGCATGCCA+GGG 0.639308 6_3:-70324389 None:intergenic
ATAGTGTGGGAGAAAATGGA+AGG 0.640122 6_3:-70321846 None:intergenic
CGCCGGCTACGATCCACGTG+TGG 0.642188 6_3:+70325769 Msa0957970:CDS
ATATATAAGACTGTAAGAGA+AGG 0.650562 6_3:+70325926 Msa0957970:CDS
AGCAACTATTATTGGCCATG+AGG 0.653728 6_3:+70323160 Msa0957970:CDS
TAGACTTTAGGTGCCACACG+TGG 0.667217 6_3:-70325782 None:intergenic
AGAGATGGAGAAGAAGCTTG+GGG 0.675997 6_3:+70322677 Msa0957970:CDS
ACATACACAGACAAGTATGG+TGG 0.691543 6_3:-70326044 None:intergenic
CAACACTCAGCATGCCAGGG+AGG 0.697251 6_3:-70324386 None:intergenic
CACACGTGGATCGTAGCCGG+CGG 0.706408 6_3:-70325768 None:intergenic
GTTTGGTGAAGAAAGTGGGA+AGG 0.710512 6_3:+70322872 Msa0957970:CDS
AAGACTGTAAGAGAAGGACA+TGG 0.732952 6_3:+70325932 Msa0957970:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTTATTTATATTTATTA+TGG + chr6_3:70325657-70325676 Msa0957970:intron 0.0%
!!! AATTTTGATTTATCATATAT+TGG + chr6_3:70324867-70324886 Msa0957970:intron 10.0%
!!! AAAATGTACAAATTTAAAAT+TGG - chr6_3:70325314-70325333 None:intergenic 10.0%
!! CTGAAAAATTATAAAAAAAT+TGG - chr6_3:70325704-70325723 None:intergenic 10.0%
!!! CAATTTTTTTATAATTTTTC+AGG + chr6_3:70325702-70325721 Msa0957970:intron 10.0%
!! AATAATAAGAATATTAGAGT+TGG + chr6_3:70322273-70322292 Msa0957970:CDS 15.0%
!!! TTTGAGATAAATAAGAATAT+TGG + chr6_3:70322366-70322385 Msa0957970:CDS 15.0%
!! TTGAGATAAATAAGAATATT+GGG + chr6_3:70322367-70322386 Msa0957970:CDS 15.0%
!!! TTGAAGTTAATAAGAATTTT+AGG + chr6_3:70322466-70322485 Msa0957970:CDS 15.0%
!!! TTTTTATAACTGTGTATTTT+GGG + chr6_3:70322601-70322620 Msa0957970:CDS 15.0%
!!! TTTGATTTGTTTAACTTATT+AGG + chr6_3:70323189-70323208 Msa0957970:intron 15.0%
!! TTTATTAAGCAATATGAAAT+TGG + chr6_3:70324735-70324754 Msa0957970:intron 15.0%
!!! ATTGGAAATTTTATTTTAGT+TGG + chr6_3:70324753-70324772 Msa0957970:intron 15.0%
!! ATAACAATTATAAGTGTTTA+TGG - chr6_3:70324952-70324971 None:intergenic 15.0%
!! ATATTGAATAGAAGATTAAA+CGG - chr6_3:70325444-70325463 None:intergenic 15.0%
!!! ATTTTAATTATACACAAATG+TGG + chr6_3:70325620-70325639 Msa0957970:intron 15.0%
!!! TTTTTTATAATTTTTCAGGA+TGG + chr6_3:70325706-70325725 Msa0957970:intron 15.0%
!! ATGAAAAAGTTGAAAATTTG+TGG - chr6_3:70321929-70321948 None:intergenic 20.0%
!!! TTTTCATCAATTTAGTTTCT+TGG + chr6_3:70321942-70321961 Msa0957970:five_prime_UTR 20.0%
!! TTCTAATAGATTAGGAAAAA+TGG + chr6_3:70322242-70322261 Msa0957970:CDS 20.0%
!! TCTAATAGATTAGGAAAAAT+GGG + chr6_3:70322243-70322262 Msa0957970:CDS 20.0%
!! TGAGATAAATAAGAATATTG+GGG + chr6_3:70322368-70322387 Msa0957970:CDS 20.0%
!!! GTTTTTATAACTGTGTATTT+TGG + chr6_3:70322600-70322619 Msa0957970:CDS 20.0%
!! TCAAATAAGTTAATCCAAAT+AGG - chr6_3:70323215-70323234 None:intergenic 20.0%
!! TTAAGCTATTTATTCAAACA+AGG + chr6_3:70323437-70323456 Msa0957970:intron 20.0%
!! CACGTTAAATATTAAGATAA+GGG + chr6_3:70323796-70323815 Msa0957970:intron 20.0%
!! GAAAAATTATGTGTTTGATT+TGG - chr6_3:70324007-70324026 None:intergenic 20.0%
!!! GGACTTTTATTAATTTTTGT+TGG - chr6_3:70324221-70324240 None:intergenic 20.0%
!! CAAATAAAGAAAGAAAACAT+TGG - chr6_3:70324631-70324650 None:intergenic 20.0%
!! TGGTATTCTTGTATAAATTA+AGG - chr6_3:70324810-70324829 None:intergenic 20.0%
!! AAATTCCAATTCGTATTTAT+AGG - chr6_3:70324852-70324871 None:intergenic 20.0%
!! GAATGAAATTAATGCAAATA+TGG - chr6_3:70325064-70325083 None:intergenic 20.0%
!! CCTATACAAATGAATTAATT+TGG - chr6_3:70325219-70325238 None:intergenic 20.0%
!! CCAAATTAATTCATTTGTAT+AGG + chr6_3:70325216-70325235 Msa0957970:intron 20.0%
!! TAAGGATTTGATATGTTAAT+AGG + chr6_3:70326091-70326110 Msa0957970:three_prime_UTR 20.0%
!!! ATTTTCTAGTCTAATTTGGT+TGG - chr6_3:70321722-70321741 None:intergenic 25.0%
!!! TGACATTTTCTAGTCTAATT+TGG - chr6_3:70321726-70321745 None:intergenic 25.0%
!! AAATGCTTTTACTTGTGAAA+GGG - chr6_3:70321770-70321789 None:intergenic 25.0%
!! AAAATGCTTTTACTTGTGAA+AGG - chr6_3:70321771-70321790 None:intergenic 25.0%
! TTTGATGAGTTCAAAAATGT+GGG - chr6_3:70321905-70321924 None:intergenic 25.0%
!! TTTTGATGAGTTCAAAAATG+TGG - chr6_3:70321906-70321925 None:intergenic 25.0%
!! TATTTGAATTTGGGTTCTAA+AGG + chr6_3:70322183-70322202 Msa0957970:CDS 25.0%
! TCTTCGATTTCTAATAGATT+AGG + chr6_3:70322234-70322253 Msa0957970:CDS 25.0%
! ATAAATAAGAATATTGGGGT+GGG + chr6_3:70322372-70322391 Msa0957970:CDS 25.0%
!!! CGTCTTTTTCAAAGAATTTT+AGG + chr6_3:70322424-70322443 Msa0957970:CDS 25.0%
!!! ATTTTAGGAGATTAGAGAAA+AGG + chr6_3:70322439-70322458 Msa0957970:CDS 25.0%
!!! TTTTAGGAGATTAGAGAAAA+GGG + chr6_3:70322440-70322459 Msa0957970:CDS 25.0%
!! TTTAACTTATTAGGCCTATT+TGG + chr6_3:70323198-70323217 Msa0957970:intron 25.0%
! ATTGGTTATAAAGAGAGAAA+AGG - chr6_3:70323692-70323711 None:intergenic 25.0%
! AAGAGCAACAAAAATTCAAT+TGG - chr6_3:70323710-70323729 None:intergenic 25.0%
! GACTCATTTCTTTGATATAT+AGG + chr6_3:70323741-70323760 Msa0957970:intron 25.0%
! GCACGTTAAATATTAAGATA+AGG + chr6_3:70323795-70323814 Msa0957970:intron 25.0%
! TAAGGGAAAAACATGAAATT+AGG + chr6_3:70323813-70323832 Msa0957970:intron 25.0%
!! TTTAAGAAACGGTTACATTT+TGG - chr6_3:70324242-70324261 None:intergenic 25.0%
! TAACCGTTTCTTAAAATCAA+GGG + chr6_3:70324247-70324266 Msa0957970:intron 25.0%
!!! TTCTCCATTTTGTTTTTGTT+TGG + chr6_3:70324452-70324471 Msa0957970:intron 25.0%
! CAAACCAAACAAAAACAAAA+TGG - chr6_3:70324459-70324478 None:intergenic 25.0%
!!! CATTTTGTTTTTGTTTGGTT+TGG + chr6_3:70324457-70324476 Msa0957970:intron 25.0%
! AACAGTGCAAATTATAAAAG+AGG - chr6_3:70324540-70324559 None:intergenic 25.0%
!! TCTTTCTTTATTTGTTGCTA+TGG + chr6_3:70324637-70324656 Msa0957970:intron 25.0%
!!! GTTTGTCATGGTATTTTTTA+TGG - chr6_3:70324830-70324849 None:intergenic 25.0%
! ACAAACCTATAAATACGAAT+TGG + chr6_3:70324844-70324863 Msa0957970:intron 25.0%
! ATTATAAGTGTTTATGGAGA+GGG - chr6_3:70324946-70324965 None:intergenic 25.0%
! AATTATAAGTGTTTATGGAG+AGG - chr6_3:70324947-70324966 None:intergenic 25.0%
! GTAAAGTAGTACAACTTAAT+GGG - chr6_3:70324979-70324998 None:intergenic 25.0%
! TGCAAATATGGATGTAATTT+CGG - chr6_3:70325052-70325071 None:intergenic 25.0%
!! CATTTACATTTGTTTCTTGT+TGG + chr6_3:70325395-70325414 Msa0957970:intron 25.0%
! ATATATAAGACTGTAAGAGA+AGG + chr6_3:70325926-70325945 Msa0957970:CDS 25.0%
! TGTGTATGTAAATGTGAATT+TGG + chr6_3:70326058-70326077 Msa0957970:three_prime_UTR 25.0%
!! GAATTTGGTTTCATTTACTA+AGG + chr6_3:70326073-70326092 Msa0957970:three_prime_UTR 25.0%
!!! AGGTTTTAAATCATCAAAGA+AGG + chr6_3:70326111-70326130 Msa0957970:three_prime_UTR 25.0%
! AATGCTTTTACTTGTGAAAG+GGG - chr6_3:70321769-70321788 None:intergenic 30.0%
!! GGATGTAGAAAAAGTATTCA+CGG - chr6_3:70321828-70321847 None:intergenic 30.0%
ATAAATAGTGTGGGAGAAAA+TGG - chr6_3:70321853-70321872 None:intergenic 30.0%
GAAAGGAAGATAAATAGTGT+GGG - chr6_3:70321862-70321881 None:intergenic 30.0%
TGAAAGGAAGATAAATAGTG+TGG - chr6_3:70321863-70321882 None:intergenic 30.0%
! GTTATTGATTGAAGCATGAA+AGG - chr6_3:70321879-70321898 None:intergenic 30.0%
! TTTCTTGGTTCTTTCAATCA+TGG + chr6_3:70321957-70321976 Msa0957970:exon 30.0%
!! TCTTGATGGTTTTCATAACT+TGG + chr6_3:70322005-70322024 Msa0957970:CDS 30.0%
! TTTTCATAACTTGGCTTCTA+GGG + chr6_3:70322014-70322033 Msa0957970:CDS 30.0%
! AGGCTGAAAAATTGGATTTT+GGG - chr6_3:70322046-70322065 None:intergenic 30.0%
! TAGGCTGAAAAATTGGATTT+TGG - chr6_3:70322047-70322066 None:intergenic 30.0%
GATTGCAAAATTCTGTTACT+AGG - chr6_3:70322066-70322085 None:intergenic 30.0%
! AGTAACAGAATTTTGCAATC+TGG + chr6_3:70322066-70322085 Msa0957970:CDS 30.0%
! GTAACAGAATTTTGCAATCT+GGG + chr6_3:70322067-70322086 Msa0957970:CDS 30.0%
CAATCTGGGTATTTGAATTT+GGG + chr6_3:70322081-70322100 Msa0957970:CDS 30.0%
!! AACAAAGATGCTAGCTTTAA+TGG + chr6_3:70322105-70322124 Msa0957970:CDS 30.0%
!! ACAAAGATGCTAGCTTTAAT+GGG + chr6_3:70322106-70322125 Msa0957970:CDS 30.0%
TCTAAAGGTGGTAACTTTAA+TGG + chr6_3:70322198-70322217 Msa0957970:CDS 30.0%
CTAAAGGTGGTAACTTTAAT+GGG + chr6_3:70322199-70322218 Msa0957970:CDS 30.0%
! AATATTAGAGTTGGTTGTCA+AGG + chr6_3:70322282-70322301 Msa0957970:CDS 30.0%
GATAAATAAGAATATTGGGG+TGG + chr6_3:70322371-70322390 Msa0957970:CDS 30.0%
TTTAGGAGATTAGAGAAAAG+GGG + chr6_3:70322441-70322460 Msa0957970:CDS 30.0%
! TTAAAATGCTGCACATTTTG+TGG - chr6_3:70322510-70322529 None:intergenic 30.0%
!! AACTGTGTATTTTGGGAATA+TGG + chr6_3:70322608-70322627 Msa0957970:CDS 30.0%
!! AATGCATTGACTGAAAATGA+AGG + chr6_3:70322903-70322922 Msa0957970:CDS 30.0%
!! ATGCATTGACTGAAAATGAA+GGG + chr6_3:70322904-70322923 Msa0957970:CDS 30.0%
! ATGAGGTTCTTGATGATAAA+TGG + chr6_3:70322955-70322974 Msa0957970:CDS 30.0%
! TGAGGTTCTTGATGATAAAT+GGG + chr6_3:70322956-70322975 Msa0957970:CDS 30.0%
!! ACATTTGGATGGATTGAATT+GGG + chr6_3:70323031-70323050 Msa0957970:CDS 30.0%
CAAATCAAACAAATACCTCA+TGG - chr6_3:70323178-70323197 None:intergenic 30.0%
CAACTGTTTGAGAGATATTA+CGG + chr6_3:70323261-70323280 Msa0957970:intron 30.0%
GAAACAATATTTGACATGTC+TGG + chr6_3:70323283-70323302 Msa0957970:intron 30.0%
CTTAAGCGCTTATTTGATTA+AGG + chr6_3:70323394-70323413 Msa0957970:intron 30.0%
AGAAGATGACAAAGAATATG+TGG + chr6_3:70323559-70323578 Msa0957970:CDS 30.0%
GAAGATGACAAAGAATATGT+GGG + chr6_3:70323560-70323579 Msa0957970:CDS 30.0%
! AATAATTACCTTCTGGAGAA+AGG - chr6_3:70323666-70323685 None:intergenic 30.0%
! ATAGGTAATGTTTGTTAGAC+AGG + chr6_3:70323759-70323778 Msa0957970:intron 30.0%
ATGAAGTTTAGCTGAATTAG+TGG + chr6_3:70323846-70323865 Msa0957970:intron 30.0%
!! ATGTGTTTGATTTGGTCTTA+AGG - chr6_3:70323999-70324018 None:intergenic 30.0%
ATTTGAATGTAGTATGAGCA+TGG + chr6_3:70324031-70324050 Msa0957970:intron 30.0%
GTAACCGTTTCTTAAAATCA+AGG + chr6_3:70324246-70324265 Msa0957970:intron 30.0%
!! CAACCCTTGATTTTAAGAAA+CGG - chr6_3:70324253-70324272 None:intergenic 30.0%
TCGTATTTATAGGTTTGTCA+TGG - chr6_3:70324842-70324861 None:intergenic 30.0%
! AAAACATGGTTATGCCATTT+GGG - chr6_3:70324916-70324935 None:intergenic 30.0%
GGTAAAGTAGTACAACTTAA+TGG - chr6_3:70324980-70324999 None:intergenic 30.0%
AATTTGGTCTATCTCATACA+CGG - chr6_3:70325203-70325222 None:intergenic 30.0%
AACCATAATGAGTCTGATTT+CGG + chr6_3:70325336-70325355 Msa0957970:intron 30.0%
!!! GCTTCATTTTAACTTCTTTC+TGG + chr6_3:70325473-70325492 Msa0957970:intron 30.0%
TACACAAATGTGGTGAATTA+TGG + chr6_3:70325630-70325649 Msa0957970:intron 30.0%
GAAATTGAAGCTGATTACAT+TGG + chr6_3:70325728-70325747 Msa0957970:CDS 30.0%
TTTACATACACAGACAAGTA+TGG - chr6_3:70326050-70326069 None:intergenic 30.0%
TTTACTTGTGAAAGGGGAAA+GGG - chr6_3:70321763-70321782 None:intergenic 35.0%
! TTTTACTTGTGAAAGGGGAA+AGG - chr6_3:70321764-70321783 None:intergenic 35.0%
!! TGTAGAAAAAGTATTCACGG+AGG - chr6_3:70321825-70321844 None:intergenic 35.0%
! AGAGGAAAACTTGTTCTTGA+TGG + chr6_3:70321991-70322010 Msa0957970:CDS 35.0%
! GTTTTCATAACTTGGCTTCT+AGG + chr6_3:70322013-70322032 Msa0957970:CDS 35.0%
CTGTTACTAGGCTGAAAAAT+TGG - chr6_3:70322054-70322073 None:intergenic 35.0%
GCAATCTGGGTATTTGAATT+TGG + chr6_3:70322080-70322099 Msa0957970:CDS 35.0%
CAACCTGGGTATTTGAATTT+GGG + chr6_3:70322174-70322193 Msa0957970:CDS 35.0%
!! TTGAATTTGGGTTCTAAAGG+TGG + chr6_3:70322186-70322205 Msa0957970:CDS 35.0%
TGTCAAGGTGGTAACTTTAA+TGG + chr6_3:70322297-70322316 Msa0957970:CDS 35.0%
GTCAAGGTGGTAACTTTAAT+GGG + chr6_3:70322298-70322317 Msa0957970:CDS 35.0%
! CGTTTTCTTCAATTCCTAAG+AGG + chr6_3:70322328-70322347 Msa0957970:CDS 35.0%
TCTTCAATTCCTAAGAGGTT+AGG + chr6_3:70322333-70322352 Msa0957970:CDS 35.0%
CTTCAATTCCTAAGAGGTTA+GGG + chr6_3:70322334-70322353 Msa0957970:CDS 35.0%
CTCATTAAAGCTAACACCTT+TGG - chr6_3:70322400-70322419 None:intergenic 35.0%
!! GGATTCTGAAACCAATTCTT+GGG - chr6_3:70322543-70322562 None:intergenic 35.0%
!! AGGATTCTGAAACCAATTCT+TGG - chr6_3:70322544-70322563 None:intergenic 35.0%
! AGAATTGGTTTCAGAATCCT+AGG + chr6_3:70322544-70322563 Msa0957970:CDS 35.0%
AATCCTAGGCATGTTATGAT+TGG + chr6_3:70322558-70322577 Msa0957970:CDS 35.0%
ATACCAATCATAACATGCCT+AGG - chr6_3:70322564-70322583 None:intergenic 35.0%
GCATGTTATGATTGGTATAG+TGG + chr6_3:70322566-70322585 Msa0957970:CDS 35.0%
GTTATGATTGGTATAGTGGT+TGG + chr6_3:70322570-70322589 Msa0957970:CDS 35.0%
GCTTCAGAAAATTCTGTGTT+TGG + chr6_3:70322855-70322874 Msa0957970:CDS 35.0%
ACTGAAAATGAAGGGAAAGT+TGG + chr6_3:70322912-70322931 Msa0957970:CDS 35.0%
AAAATGAAGGGAAAGTTGGA+GGG + chr6_3:70322916-70322935 Msa0957970:CDS 35.0%
! ATAAATGGGTTCAGAAGAGT+AGG + chr6_3:70322970-70322989 Msa0957970:CDS 35.0%
GTTCAGAAGAGTAGGAAAAA+AGG + chr6_3:70322978-70322997 Msa0957970:CDS 35.0%
!! CACATTTGGATGGATTGAAT+TGG + chr6_3:70323030-70323049 Msa0957970:CDS 35.0%
! TGGATTGAATTGGGAGATTT+TGG + chr6_3:70323040-70323059 Msa0957970:CDS 35.0%
! ATTGAATTGGGAGATTTTGG+TGG + chr6_3:70323043-70323062 Msa0957970:CDS 35.0%
!! AAGCAAAAGGCATTAACCAT+AGG - chr6_3:70323077-70323096 None:intergenic 35.0%
GCAGAGATAGCAACTATTAT+TGG + chr6_3:70323152-70323171 Msa0957970:CDS 35.0%
!! GACATAGTGTTGACAATATC+AGG - chr6_3:70323624-70323643 None:intergenic 35.0%
!! CTATGTCATCGCTTTTGTTA+CGG + chr6_3:70323637-70323656 Msa0957970:CDS 35.0%
AAGGAGGAATAATTACCTTC+TGG - chr6_3:70323673-70323692 None:intergenic 35.0%
GGTTATAAAGAGAGAAAAGG+AGG - chr6_3:70323689-70323708 None:intergenic 35.0%
! TTTTGACCTTCCCAATGATT+TGG + chr6_3:70323962-70323981 Msa0957970:intron 35.0%
AGGAATAGAGCCAAATCATT+GGG - chr6_3:70323975-70323994 None:intergenic 35.0%
! CTCTTGAGTTATCTCGTTTT+GGG - chr6_3:70324117-70324136 None:intergenic 35.0%
! AATTATTTTCTGCACAGACC+TGG + chr6_3:70324140-70324159 Msa0957970:CDS 35.0%
CAAGAAACATGAAGGATGTA+TGG - chr6_3:70324281-70324300 None:intergenic 35.0%
AAACGCAACAAGAAACATGA+AGG - chr6_3:70324289-70324308 None:intergenic 35.0%
TTTCTGTCTGTTCATTGTGT+TGG + chr6_3:70324602-70324621 Msa0957970:intron 35.0%
! GAAGTATTCATTAGCCCAAA+TGG + chr6_3:70324899-70324918 Msa0957970:intron 35.0%
GAAAACATGGTTATGCCATT+TGG - chr6_3:70324917-70324936 None:intergenic 35.0%
TACTAGAGAATTCATGCATC+AGG - chr6_3:70325001-70325020 None:intergenic 35.0%
TATGGATGTAATTTCGGAGT+AGG - chr6_3:70325046-70325065 None:intergenic 35.0%
! ATTTGTTTCTTGTTGGACTG+TGG + chr6_3:70325402-70325421 Msa0957970:intron 35.0%
ACCTAAAGTCTACGAAAAGT+TGG + chr6_3:70325793-70325812 Msa0957970:CDS 35.0%
CCTAAAGTCTACGAAAAGTT+GGG + chr6_3:70325794-70325813 Msa0957970:CDS 35.0%
GAAAAGTTGGGAAAAATCTC+CGG + chr6_3:70325806-70325825 Msa0957970:CDS 35.0%
ATCTAAAAGCTTAGAATCGC+CGG - chr6_3:70325828-70325847 None:intergenic 35.0%
AAGAAAACGAGCAGAATTAC+TGG + chr6_3:70325871-70325890 Msa0957970:CDS 35.0%
! TGGTGTTGAAGGATTTCTTT+AGG + chr6_3:70325952-70325971 Msa0957970:CDS 35.0%
TTACTTGTGAAAGGGGAAAG+GGG - chr6_3:70321762-70321781 None:intergenic 40.0%
! CGGAGGTGTGTGATTTATAA+AGG - chr6_3:70321808-70321827 None:intergenic 40.0%
ATAGTGTGGGAGAAAATGGA+AGG - chr6_3:70321849-70321868 None:intergenic 40.0%
TGGTTCTTTCAATCATGGCT+TGG + chr6_3:70321962-70321981 Msa0957970:exon 40.0%
!! ATCATGGCTTGGTATAGAAG+AGG + chr6_3:70321973-70321992 Msa0957970:exon 40.0%
GGTTGCAAAATTCTCGAACT+AGG - chr6_3:70322159-70322178 None:intergenic 40.0%
! AGTTCGAGAATTTTGCAACC+TGG + chr6_3:70322159-70322178 Msa0957970:CDS 40.0%
! GTTCGAGAATTTTGCAACCT+GGG + chr6_3:70322160-70322179 Msa0957970:CDS 40.0%
GCAACCTGGGTATTTGAATT+TGG + chr6_3:70322173-70322192 Msa0957970:CDS 40.0%
GAACCCAAATTCAAATACCC+AGG - chr6_3:70322180-70322199 None:intergenic 40.0%
! ATTAGAGTTGGTTGTCAAGG+TGG + chr6_3:70322285-70322304 Msa0957970:CDS 40.0%
TCCTAAGAGGTTAGGGAAAA+TGG + chr6_3:70322341-70322360 Msa0957970:CDS 40.0%
CCTAAGAGGTTAGGGAAAAT+GGG + chr6_3:70322342-70322361 Msa0957970:CDS 40.0%
! TGCAGCATTTTAAGCCAAGA+GGG + chr6_3:70322517-70322536 Msa0957970:CDS 40.0%
! ATTGGTATAGTGGTTGGTTC+AGG + chr6_3:70322576-70322595 Msa0957970:CDS 40.0%
AAATGCGTTCGCTTCGTATA+AGG - chr6_3:70322642-70322661 None:intergenic 40.0%
!! GATTTTGATGCCGAAAGAGA+TGG + chr6_3:70322662-70322681 Msa0957970:CDS 40.0%
AGCTTCTTCTCCATCTCTTT+CGG - chr6_3:70322675-70322694 None:intergenic 40.0%
AAAGAGATGGAGAAGAAGCT+TGG + chr6_3:70322675-70322694 Msa0957970:CDS 40.0%
AAGAGATGGAGAAGAAGCTT+GGG + chr6_3:70322676-70322695 Msa0957970:CDS 40.0%
!! AAGATGAAGGCGGGTTTTAA+GGG + chr6_3:70322714-70322733 Msa0957970:CDS 40.0%
! ATCCTGAAAGTGTGAGAGTT+AGG + chr6_3:70322757-70322776 Msa0957970:CDS 40.0%
ATCCTAACTCTCACACTTTC+AGG - chr6_3:70322762-70322781 None:intergenic 40.0%
!! ATTATCGAAGCGTTGAAGAG+AGG + chr6_3:70322795-70322814 Msa0957970:CDS 40.0%
!! TTATCGAAGCGTTGAAGAGA+GGG + chr6_3:70322796-70322815 Msa0957970:CDS 40.0%
! TCTGTGTTTGGTGAAGAAAG+TGG + chr6_3:70322867-70322886 Msa0957970:CDS 40.0%
! CTGTGTTTGGTGAAGAAAGT+GGG + chr6_3:70322868-70322887 Msa0957970:CDS 40.0%
GAAAATGAAGGGAAAGTTGG+AGG + chr6_3:70322915-70322934 Msa0957970:CDS 40.0%
GAAGAGTAGGAAAAAAGGTC+AGG + chr6_3:70322983-70323002 Msa0957970:CDS 40.0%
GCAACCTTATACGTCACATT+TGG + chr6_3:70323016-70323035 Msa0957970:CDS 40.0%
CCATCCAAATGTGACGTATA+AGG - chr6_3:70323023-70323042 None:intergenic 40.0%
CCTTATACGTCACATTTGGA+TGG + chr6_3:70323020-70323039 Msa0957970:CDS 40.0%
! GTTAATGCCTTTTGCTTACC+TGG + chr6_3:70323080-70323099 Msa0957970:CDS 40.0%
TGGGAAGATAGTCGTGTTTA+CGG + chr6_3:70323103-70323122 Msa0957970:CDS 40.0%
AGCAACTATTATTGGCCATG+AGG + chr6_3:70323160-70323179 Msa0957970:CDS 40.0%
AGTCTTAACACTTTGCTGCT+TGG + chr6_3:70323498-70323517 Msa0957970:intron 40.0%
AGCTGAATTAGTGGAACTAG+AGG + chr6_3:70323855-70323874 Msa0957970:intron 40.0%
ATAGAGCCAAATCATTGGGA+AGG - chr6_3:70323971-70323990 None:intergenic 40.0%
CAGGAATAGAGCCAAATCAT+TGG - chr6_3:70323976-70323995 None:intergenic 40.0%
!! GTTTGATTTGGTCTTAAGGC+AGG - chr6_3:70323995-70324014 None:intergenic 40.0%
! CATAGTCAGAGGTGTAAACT+CGG - chr6_3:70324090-70324109 None:intergenic 40.0%
!! TTGAGTTATCTCGTTTTGGG+AGG - chr6_3:70324114-70324133 None:intergenic 40.0%
! GCTCTTGAGTTATCTCGTTT+TGG - chr6_3:70324118-70324137 None:intergenic 40.0%
AGTCATACCAAGTCCATACA+AGG - chr6_3:70324169-70324188 None:intergenic 40.0%
TCTCTGATTCTGTTCAGTGT+TGG + chr6_3:70324684-70324703 Msa0957970:intron 40.0%
CTCCGAAATCAGACTCATTA+TGG - chr6_3:70325341-70325360 None:intergenic 40.0%
GAAGATTAAACGGAAACCCT+AGG - chr6_3:70325434-70325453 None:intergenic 40.0%
TAACCAACCATGTTCTGACA+TGG + chr6_3:70325536-70325555 Msa0957970:intron 40.0%
AAAGTAGCCATGTCAGAACA+TGG - chr6_3:70325546-70325565 None:intergenic 40.0%
! CCCAACTTTTCGTAGACTTT+AGG - chr6_3:70325797-70325816 None:intergenic 40.0%
TATTTCGCTACTCATCCATC+TGG + chr6_3:70325848-70325867 Msa0957970:CDS 40.0%
AAGACTGTAAGAGAAGGACA+TGG + chr6_3:70325932-70325951 Msa0957970:CDS 40.0%
ACATACACAGACAAGTATGG+TGG - chr6_3:70326047-70326066 None:intergenic 40.0%
! CCCATTTTCCCTAACCTCTT+AGG - chr6_3:70322345-70322364 None:intergenic 45.0%
! AATATTGGGGTGGGTTCCAA+AGG + chr6_3:70322381-70322400 Msa0957970:CDS 45.0%
! GTGCAGCATTTTAAGCCAAG+AGG + chr6_3:70322516-70322535 Msa0957970:CDS 45.0%
AGAGATGGAGAAGAAGCTTG+GGG + chr6_3:70322677-70322696 Msa0957970:CDS 45.0%
GAGCGAGTTTGAGAAGATGA+AGG + chr6_3:70322701-70322720 Msa0957970:CDS 45.0%
CGAGTTTGAGAAGATGAAGG+CGG + chr6_3:70322704-70322723 Msa0957970:CDS 45.0%
GAGTTTGAGAAGATGAAGGC+GGG + chr6_3:70322705-70322724 Msa0957970:CDS 45.0%
!! GAAGATGAAGGCGGGTTTTA+AGG + chr6_3:70322713-70322732 Msa0957970:CDS 45.0%
!!! AGATGAAGGCGGGTTTTAAG+GGG + chr6_3:70322715-70322734 Msa0957970:CDS 45.0%
ACACTTTCAGGATGCATTGC+AGG - chr6_3:70322750-70322769 None:intergenic 45.0%
GTTGAAGAGAGGGTTGAGTA+AGG + chr6_3:70322806-70322825 Msa0957970:CDS 45.0%
GGTTGAGTAAGGAGAATGTG+TGG + chr6_3:70322817-70322836 Msa0957970:CDS 45.0%
! GTTTGGTGAAGAAAGTGGGA+AGG + chr6_3:70322872-70322891 Msa0957970:CDS 45.0%
AAGGGAAAGTTGGAGGGAAT+TGG + chr6_3:70322922-70322941 Msa0957970:CDS 45.0%
CATCAAGAACCTCATCTTCC+CGG - chr6_3:70322950-70322969 None:intergenic 45.0%
!!! TTGGGAGATTTTGGTGGTGA+AGG + chr6_3:70323049-70323068 Msa0957970:CDS 45.0%
!! TTTGGTGGTGAAGGATCCTA+TGG + chr6_3:70323058-70323077 Msa0957970:CDS 45.0%
! AATGCCTTTTGCTTACCTGG+TGG + chr6_3:70323083-70323102 Msa0957970:CDS 45.0%
! ATGCCTTTTGCTTACCTGGT+GGG + chr6_3:70323084-70323103 Msa0957970:CDS 45.0%
GGGAAGATAGTCGTGTTTAC+GGG + chr6_3:70323104-70323123 Msa0957970:CDS 45.0%
! CACTTTGCTGCTTGGTGATT+AGG + chr6_3:70323506-70323525 Msa0957970:intron 45.0%
! TTGCTGCTTGGTGATTAGGT+TGG + chr6_3:70323510-70323529 Msa0957970:intron 45.0%
!! TGATTAGGTTGGACATGCTG+TGG + chr6_3:70323521-70323540 Msa0957970:intron 45.0%
GCTACACGACTCAACGTATA+GGG - chr6_3:70323934-70323953 None:intergenic 45.0%
TGCTACACGACTCAACGTAT+AGG - chr6_3:70323935-70323954 None:intergenic 45.0%
!! TTTTGGGAGGTCATAGTCAG+AGG - chr6_3:70324101-70324120 None:intergenic 45.0%
CTGTTGCTGTGTATCATCTC+CGG + chr6_3:70324359-70324378 Msa0957970:CDS 45.0%
! TTTTCTTGCGTTTGCGTGTC+AGG + chr6_3:70324427-70324446 Msa0957970:CDS 45.0%
!! GAGAGGGCATTACGAAAACA+TGG - chr6_3:70324930-70324949 None:intergenic 45.0%
!! TTGGACTGTGGATTAGTCCT+AGG + chr6_3:70325414-70325433 Msa0957970:intron 45.0%
!! TGGACTGTGGATTAGTCCTA+GGG + chr6_3:70325415-70325434 Msa0957970:intron 45.0%
TAGCCATGTCAGAACATGGT+TGG - chr6_3:70325542-70325561 None:intergenic 45.0%
CTTCTATTAGTTGCATCCGC+CGG + chr6_3:70325752-70325771 Msa0957970:CDS 45.0%
! TCTGCTCGTTTTCTTCCAGA+TGG - chr6_3:70325866-70325885 None:intergenic 45.0%
!! AGAATTACTGGCTCAAGCTC+AGG + chr6_3:70325883-70325902 Msa0957970:CDS 45.0%
! AGAGAAGGACATGGTGTTGA+AGG + chr6_3:70325941-70325960 Msa0957970:CDS 45.0%
CAGACAAGTGTTCCAACTGT+AGG + chr6_3:70326016-70326035 Msa0957970:three_prime_UTR 45.0%
ATGGTGGCATTTCCTACAGT+TGG - chr6_3:70326031-70326050 None:intergenic 45.0%
!! TGAAAAATTATAAAAAAATT+GGG - chr6_3:70325703-70325722 None:intergenic 5.0%
AGGGGAAAGGGGAAGAAGAA+TGG - chr6_3:70321751-70321770 None:intergenic 50.0%
AACCAATTCTTGGGCCCTCT+TGG - chr6_3:70322534-70322553 None:intergenic 50.0%
AAGTTGGAGGGAATTGGCAC+CGG + chr6_3:70322928-70322947 Msa0957970:CDS 50.0%
AGGAAAAAAGGTCAGGAGCG+AGG + chr6_3:70322990-70323009 Msa0957970:CDS 50.0%
GGAAAAAAGGTCAGGAGCGA+GGG + chr6_3:70322991-70323010 Msa0957970:CDS 50.0%
CTTCCCACCAGGTAAGCAAA+AGG - chr6_3:70323090-70323109 None:intergenic 50.0%
AACACGACTATCTTCCCACC+AGG - chr6_3:70323101-70323120 None:intergenic 50.0%
CATCTTCTCAGCACTGTGTC+TGG - chr6_3:70323547-70323566 None:intergenic 50.0%
TACGGCTACCTTTCTCCAGA+AGG + chr6_3:70323655-70323674 Msa0957970:CDS 50.0%
ACAGACCTGGATGCCTTGTA+TGG + chr6_3:70324153-70324172 Msa0957970:intron 50.0%
! CAAGTCCATACAAGGCATCC+AGG - chr6_3:70324161-70324180 None:intergenic 50.0%
CTGGATGCCTTGTATGGACT+TGG + chr6_3:70324159-70324178 Msa0957970:intron 50.0%
ACAGCAACAGCATTGTGCAC+AGG - chr6_3:70324349-70324368 None:intergenic 50.0%
ATGCAACACTCAGCATGCCA+GGG - chr6_3:70324392-70324411 None:intergenic 50.0%
AATGCAACACTCAGCATGCC+AGG - chr6_3:70324393-70324412 None:intergenic 50.0%
! TAGACTTTAGGTGCCACACG+TGG - chr6_3:70325785-70325804 None:intergenic 50.0%
AGCCAAGAGGGCCCAAGAAT+TGG + chr6_3:70322529-70322548 Msa0957970:CDS 55.0%
AGTTGGAGGGAATTGGCACC+GGG + chr6_3:70322929-70322948 Msa0957970:CDS 55.0%
! GAATTGGCACCGGGAAGATG+AGG + chr6_3:70322938-70322957 Msa0957970:CDS 55.0%
! ACTGGCTCAAGCTCAGGTGA+TGG + chr6_3:70325889-70325908 Msa0957970:CDS 55.0%
TCATCTCCGGCATTCCTCCC+TGG + chr6_3:70324372-70324391 Msa0957970:CDS 60.0%
AGCATGCCAGGGAGGAATGC+CGG - chr6_3:70324381-70324400 None:intergenic 60.0%
CAACACTCAGCATGCCAGGG+AGG - chr6_3:70324389-70324408 None:intergenic 60.0%
TGCCACACGTGGATCGTAGC+CGG - chr6_3:70325774-70325793 None:intergenic 60.0%
CACACGTGGATCGTAGCCGG+CGG - chr6_3:70325771-70325790 None:intergenic 65.0%
! CGCCGGCTACGATCCACGTG+TGG + chr6_3:70325769-70325788 Msa0957970:CDS 70.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 70321712 70326148 70321712 ID=Msa0957970;Name=Msa0957970
chr6_3 mRNA 70321712 70326148 70321712 ID=Msa0957970-mRNA-1;Parent=Msa0957970;Name=Msa0957970-mRNA-1;_AED=0.06;_eAED=0.06;_QI=264|0.25|0.6|0.6|1|1|5|175|622
chr6_3 exon 70321712 70323181 70321712 ID=Msa0957970-mRNA-1:exon:12851;Parent=Msa0957970-mRNA-1
chr6_3 exon 70323528 70323676 70323528 ID=Msa0957970-mRNA-1:exon:12852;Parent=Msa0957970-mRNA-1
chr6_3 exon 70324043 70324169 70324043 ID=Msa0957970-mRNA-1:exon:12853;Parent=Msa0957970-mRNA-1
chr6_3 exon 70324312 70324448 70324312 ID=Msa0957970-mRNA-1:exon:12854;Parent=Msa0957970-mRNA-1
chr6_3 exon 70325724 70326148 70325724 ID=Msa0957970-mRNA-1:exon:12855;Parent=Msa0957970-mRNA-1
chr6_3 five_prime_UTR 70321712 70321975 70321712 ID=Msa0957970-mRNA-1:five_prime_utr;Parent=Msa0957970-mRNA-1
chr6_3 CDS 70321976 70323181 70321976 ID=Msa0957970-mRNA-1:cds;Parent=Msa0957970-mRNA-1
chr6_3 CDS 70323528 70323676 70323528 ID=Msa0957970-mRNA-1:cds;Parent=Msa0957970-mRNA-1
chr6_3 CDS 70324043 70324169 70324043 ID=Msa0957970-mRNA-1:cds;Parent=Msa0957970-mRNA-1
chr6_3 CDS 70324312 70324448 70324312 ID=Msa0957970-mRNA-1:cds;Parent=Msa0957970-mRNA-1
chr6_3 CDS 70325724 70325973 70325724 ID=Msa0957970-mRNA-1:cds;Parent=Msa0957970-mRNA-1
chr6_3 three_prime_UTR 70325974 70326148 70325974 ID=Msa0957970-mRNA-1:three_prime_utr;Parent=Msa0957970-mRNA-1
Gene Sequence

>Msa0957970

ATGGCTTGGTATAGAAGAGGAAAACTTGTTCTTGATGGTTTTCATAACTTGGCTTCTAGGGTTTCATCCCAAAATCCAATTTTTCAGCCTAGTAACAGAATTTTGCAATCTGGGTATTTGAATTTGGGTAACAAAGATGCTAGCTTTAATGGGTTTTCTTCGTTTTCTTCAATTTTTCAACCTAGTTCGAGAATTTTGCAACCTGGGTATTTGAATTTGGGTTCTAAAGGTGGTAACTTTAATGGGTTTTCTTCATTTTCTTCGATTTCTAATAGATTAGGAAAAATGGGTTTTGAAAATAATAAGAATATTAGAGTTGGTTGTCAAGGTGGTAACTTTAATGGGTTTTCTTCGTTTTCTTCAATTCCTAAGAGGTTAGGGAAAATGGGTTTTGAGATAAATAAGAATATTGGGGTGGGTTCCAAAGGTGTTAGCTTTAATGAGTTTTCGTCTTTTTCAAAGAATTTTAGGAGATTAGAGAAAAGGGGTTTTGAAGTTAATAAGAATTTTAGGAGATTTTACTATGTTGATCCACAAAATGTGCAGCATTTTAAGCCAAGAGGGCCCAAGAATTGGTTTCAGAATCCTAGGCATGTTATGATTGGTATAGTGGTTGGTTCAGGTGTTTTTATAACTGTGTATTTTGGGAATATGGAAACTGTTCCTTATACGAAGCGAACGCATTTGATTTTGATGCCGAAAGAGATGGAGAAGAAGCTTGGGGAGAGCGAGTTTGAGAAGATGAAGGCGGGTTTTAAGGGGAAATTGTTACCTGCAATGCATCCTGAAAGTGTGAGAGTTAGGATGATAGCGAATGATATTATCGAAGCGTTGAAGAGAGGGTTGAGTAAGGAGAATGTGTGGAGTGATATAGATTATGCTTCAGAAAATTCTGTGTTTGGTGAAGAAAGTGGGAAGGAGACGATTAATGCATTGACTGAAAATGAAGGGAAAGTTGGAGGGAATTGGCACCGGGAAGATGAGGTTCTTGATGATAAATGGGTTCAGAAGAGTAGGAAAAAAGGTCAGGAGCGAGGGTCGCAACCTTATACGTCACATTTGGATGGATTGAATTGGGAGATTTTGGTGGTGAAGGATCCTATGGTTAATGCCTTTTGCTTACCTGGTGGGAAGATAGTCGTGTTTACGGGTTTGCTTGAACATTTTAGAAGTGATGCAGAGATAGCAACTATTATTGGCCATGAGGTTGGACATGCTGTGGCCAGACACAGTGCTGAGAAGATGACAAAGAATATGTGGGTTTTAATTCTAAACTTCGTACTTTATCAATTCGTCACACCTGATATTGTCAACACTATGTCATCGCTTTTGTTACGGCTACCTTTCTCCAGAAGTATGAGCATGGTTGTCAAACTCGTTAGTCAACTCGTAGATTCAGCCGAGTTTACACCTCTGACTATGACCTCCCAAAACGAGATAACTCAAGAGCAGAATTATTTTCTGCACAGACCTGGATGCCTTTATAATACAATTCTAATTGCAACTATTTCTTATTCCTGTGCACAATGCTGTTGCTGTGTATCATCTCCGGCATTCCTCCCTGGCATGCTGAGTGTTGCATTGTGTTTCATCGCTATTTTCTTGCGTTTGCGTGTCAGGATGGAAATTGAAGCTGATTACATTGGTCTTCTATTAGTTGCATCCGCCGGCTACGATCCACGTGTGGCACCTAAAGTCTACGAAAAGTTGGGAAAAATCTCCGGCGATTCTAAGCTTTTAGATTATTTCGCTACTCATCCATCTGGAAGAAAACGAGCAGAATTACTGGCTCAAGCTCAGGTGATGGATGAAGCTCTTACTATATATAAGACTGTAAGAGAAGGACATGGTGTTGAAGGATTTCTTTAG

Protein sequence

>Msa0957970

MAWYRRGKLVLDGFHNLASRVSSQNPIFQPSNRILQSGYLNLGNKDASFNGFSSFSSIFQPSSRILQPGYLNLGSKGGNFNGFSSFSSISNRLGKMGFENNKNIRVGCQGGNFNGFSSFSSIPKRLGKMGFEINKNIGVGSKGVSFNEFSSFSKNFRRLEKRGFEVNKNFRRFYYVDPQNVQHFKPRGPKNWFQNPRHVMIGIVVGSGVFITVYFGNMETVPYTKRTHLILMPKEMEKKLGESEFEKMKAGFKGKLLPAMHPESVRVRMIANDIIEALKRGLSKENVWSDIDYASENSVFGEESGKETINALTENEGKVGGNWHREDEVLDDKWVQKSRKKGQERGSQPYTSHLDGLNWEILVVKDPMVNAFCLPGGKIVVFTGLLEHFRSDAEIATIIGHEVGHAVARHSAEKMTKNMWVLILNFVLYQFVTPDIVNTMSSLLLRLPFSRSMSMVVKLVSQLVDSAEFTPLTMTSQNEITQEQNYFLHRPGCLYNTILIATISYSCAQCCCCVSSPAFLPGMLSVALCFIAIFLRLRVRMEIEADYIGLLLVASAGYDPRVAPKVYEKLGKISGDSKLLDYFATHPSGRKRAELLAQAQVMDEALTIYKTVREGHGVEGFL*