Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0736570 | RHN56857.1 | 99.565 | 460 | 2 | 0 | 1 | 460 | 1 | 460 | 0.0 | 932 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0736570 | sp|Q8RWB1|SRL1_ARATH | 72.569 | 288 | 47 | 5 | 2 | 287 | 3 | 260 | 8.97e-144 | 419 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0736570 | A0A396I1Y9 | 99.565 | 460 | 2 | 0 | 1 | 460 | 1 | 460 | 0.0 | 932 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007850 | Msa0736570 | 0.806818 | 6.837805e-50 | -8.615850e-47 |
| Msa0010490 | Msa0736570 | 0.800835 | 1.195859e-48 | -8.615850e-47 |
| Msa0010500 | Msa0736570 | 0.808080 | 3.691165e-50 | -8.615850e-47 |
| Msa0017320 | Msa0736570 | 0.825892 | 3.659053e-54 | -8.615850e-47 |
| Msa0026660 | Msa0736570 | 0.823544 | 1.308403e-53 | -8.615850e-47 |
| Msa0029260 | Msa0736570 | 0.819273 | 1.266458e-52 | -8.615850e-47 |
| Msa0037840 | Msa0736570 | 0.813021 | 3.160261e-51 | -8.615850e-47 |
| Msa0052860 | Msa0736570 | 0.801214 | 1.000824e-48 | -8.615850e-47 |
| Msa0062490 | Msa0736570 | 0.809624 | 1.725679e-50 | -8.615850e-47 |
| Msa0065650 | Msa0736570 | 0.815723 | 7.986249e-52 | -8.615850e-47 |
| Msa0090030 | Msa0736570 | 0.813793 | 2.138143e-51 | -8.615850e-47 |
| Msa0092170 | Msa0736570 | 0.814514 | 1.481759e-51 | -8.615850e-47 |
| Msa0095360 | Msa0736570 | 0.809748 | 1.623419e-50 | -8.615850e-47 |
| Msa0095770 | Msa0736570 | 0.806755 | 7.050553e-50 | -8.615850e-47 |
| Msa0103480 | Msa0736570 | 0.809484 | 1.849205e-50 | -8.615850e-47 |
| Msa0609000 | Msa0736570 | 0.805993 | 1.020575e-49 | -8.615850e-47 |
| Msa0610500 | Msa0736570 | 0.805128 | 1.550153e-49 | -8.615850e-47 |
| Msa0620330 | Msa0736570 | 0.839175 | 1.854274e-57 | -8.615850e-47 |
| Msa0651150 | Msa0736570 | 0.809003 | 2.344904e-50 | -8.615850e-47 |
| Msa0654620 | Msa0736570 | 0.807379 | 5.203226e-50 | -8.615850e-47 |
| Msa0668460 | Msa0736570 | -0.811700 | 6.141003e-51 | -8.615850e-47 |
| Msa0679550 | Msa0736570 | 0.820461 | 6.777771e-53 | -8.615850e-47 |
| Msa0694840 | Msa0736570 | 0.814045 | 1.881518e-51 | -8.615850e-47 |
| Msa0694990 | Msa0736570 | 0.804264 | 2.348188e-49 | -8.615850e-47 |
| Msa0706390 | Msa0736570 | 0.844030 | 9.728664e-59 | -8.615850e-47 |
| Msa0720370 | Msa0736570 | 0.803057 | 4.179219e-49 | -8.615850e-47 |
| Msa0721340 | Msa0736570 | 0.844763 | 6.180028e-59 | -8.615850e-47 |
| Msa0726080 | Msa0736570 | 0.823366 | 1.439667e-53 | -8.615850e-47 |
| Msa0736570 | Msa0743530 | 0.806394 | 8.404422e-50 | -8.615850e-47 |
| Msa0736570 | Msa0756930 | 0.824529 | 7.684510e-54 | -8.615850e-47 |
| Msa0736570 | Msa0774750 | 0.835457 | 1.659704e-56 | -8.615850e-47 |
| Msa0736570 | Msa0781270 | 0.812347 | 4.439121e-51 | -8.615850e-47 |
| Msa0736570 | Msa0781710 | 0.856467 | 3.154157e-62 | -8.615850e-47 |
| Msa0736570 | Msa0788110 | 0.815389 | 9.480474e-52 | -8.615850e-47 |
| Msa0736570 | Msa0801730 | 0.806743 | 7.092514e-50 | -8.615850e-47 |
| Msa0736570 | Msa0812060 | 0.916395 | 1.876276e-85 | -8.615850e-47 |
| Msa0736570 | Msa0812290 | 0.822182 | 2.716387e-53 | -8.615850e-47 |
| Msa0736570 | Msa0820530 | -0.808898 | 2.470392e-50 | -8.615850e-47 |
| Msa0736570 | Msa0822170 | 0.809632 | 1.719239e-50 | -8.615850e-47 |
| Msa0736570 | Msa0822180 | 0.801753 | 7.760839e-49 | -8.615850e-47 |
| Msa0736570 | Msa0823500 | 0.865377 | 6.173800e-65 | -8.615850e-47 |
| Msa0736570 | Msa0829220 | 0.800132 | 1.663646e-48 | -8.615850e-47 |
| Msa0736570 | Msa0836500 | 0.801696 | 7.971483e-49 | -8.615850e-47 |
| Msa0736570 | Msa0846230 | 0.821520 | 3.865620e-53 | -8.615850e-47 |
| Msa0736570 | Msa0847470 | 0.824697 | 7.012398e-54 | -8.615850e-47 |
| Msa0736570 | Msa0856090 | 0.832696 | 8.156823e-56 | -8.615850e-47 |
| Msa0736570 | Msa0859180 | 0.805527 | 1.278804e-49 | -8.615850e-47 |
| Msa0736570 | Msa0859320 | 0.802212 | 6.243570e-49 | -8.615850e-47 |
| Msa0736570 | Msa0861470 | 0.808211 | 3.461933e-50 | -8.615850e-47 |
| Msa0736570 | Msa0862500 | 0.865649 | 5.067870e-65 | -8.615850e-47 |
| Msa0736570 | Msa0877710 | 0.817619 | 3.001524e-52 | -8.615850e-47 |
| Msa0736570 | Msa0879860 | 0.839849 | 1.239019e-57 | -8.615850e-47 |
| Msa0736570 | Msa0899350 | 0.820777 | 5.732270e-53 | -8.615850e-47 |
| Msa0736570 | Msa0901320 | 0.824240 | 8.983551e-54 | -8.615850e-47 |
| Msa0736570 | Msa0965020 | 0.827872 | 1.230981e-54 | -8.615850e-47 |
| Msa0736570 | Msa0970600 | 0.805566 | 1.254685e-49 | -8.615850e-47 |
| Msa0736570 | Msa0980020 | 0.819653 | 1.037176e-52 | -8.615850e-47 |
| Msa0736570 | Msa0994370 | 0.802131 | 6.490005e-49 | -8.615850e-47 |
| Msa0736570 | Msa1001080 | 0.800680 | 1.286693e-48 | -8.615850e-47 |
| Msa0736570 | Msa1034270 | 0.801766 | 7.711100e-49 | -8.615850e-47 |
| Msa0736570 | Msa1036740 | 0.803454 | 3.459157e-49 | -8.615850e-47 |
| Msa0736570 | Msa1042660 | 0.822500 | 2.291887e-53 | -8.615850e-47 |
| Msa0736570 | Msa1071320 | 0.804001 | 2.663808e-49 | -8.615850e-47 |
| Msa0736570 | Msa1077340 | 0.809738 | 1.631537e-50 | -8.615850e-47 |
| Msa0736570 | Msa1081790 | -0.801841 | 7.444050e-49 | -8.615850e-47 |
| Msa0736570 | Msa1088290 | 0.806853 | 6.721449e-50 | -8.615850e-47 |
| Msa0736570 | Msa1089740 | -0.800090 | 1.696336e-48 | -8.615850e-47 |
| Msa0736570 | Msa1115280 | 0.804913 | 1.719349e-49 | -8.615850e-47 |
| Msa0736570 | Msa1120810 | 0.800279 | 1.552681e-48 | -8.615850e-47 |
| Msa0736570 | Msa1122780 | 0.806856 | 6.713213e-50 | -8.615850e-47 |
| Msa0736570 | Msa1128330 | 0.809968 | 1.455488e-50 | -8.615850e-47 |
| Msa0736570 | Msa1129060 | -0.805836 | 1.101393e-49 | -8.615850e-47 |
| Msa0736570 | Msa1130530 | 0.819502 | 1.122903e-52 | -8.615850e-47 |
| Msa0736570 | Msa1138520 | 0.806467 | 8.110233e-50 | -8.615850e-47 |
| Msa0736570 | Msa1158770 | 0.804414 | 2.185270e-49 | -8.615850e-47 |
| Msa0736570 | Msa1163870 | 0.827132 | 1.852162e-54 | -8.615850e-47 |
| Msa0736570 | Msa1164020 | 0.802610 | 5.169388e-49 | -8.615850e-47 |
| Msa0736570 | Msa1176980 | 0.802657 | 5.056224e-49 | -8.615850e-47 |
| Msa0736570 | Msa1178050 | 0.821581 | 3.742769e-53 | -8.615850e-47 |
| Msa0736570 | Msa1178370 | 0.807531 | 4.829974e-50 | -8.615850e-47 |
| Msa0736570 | Msa1225600 | 0.801915 | 7.186990e-49 | -8.615850e-47 |
| Msa0736570 | Msa1226610 | 0.809564 | 1.777675e-50 | -8.615850e-47 |
| Msa0736570 | Msa1259530 | 0.807005 | 6.244544e-50 | -8.615850e-47 |
| Msa0736570 | Msa1270660 | 0.817996 | 2.467454e-52 | -8.615850e-47 |
| Msa0736570 | Msa1270730 | 0.805391 | 1.365486e-49 | -8.615850e-47 |
| Msa0736570 | Msa1295330 | 0.804997 | 1.651108e-49 | -8.615850e-47 |
| Msa0736570 | Msa1307180 | 0.800551 | 1.366694e-48 | -8.615850e-47 |
| Msa0736570 | Msa1314770 | 0.806704 | 7.229876e-50 | -8.615850e-47 |
| Msa0736570 | Msa1331280 | 0.800448 | 1.434552e-48 | -8.615850e-47 |
| Msa0736570 | Msa1331350 | 0.828090 | 1.090347e-54 | -8.615850e-47 |
| Msa0736570 | Msa1336040 | 0.826323 | 2.888748e-54 | -8.615850e-47 |
| Msa0736570 | Msa1340830 | 0.861918 | 7.317063e-64 | -8.615850e-47 |
| Msa0736570 | Msa1341490 | 0.821982 | 3.022037e-53 | -8.615850e-47 |
| Msa0736570 | Msa1363700 | 0.810643 | 1.040820e-50 | -8.615850e-47 |
| Msa0736570 | Msa1365860 | 0.818925 | 1.519438e-52 | -8.615850e-47 |
| Msa0736570 | Msa1370590 | 0.802085 | 6.631327e-49 | -8.615850e-47 |
| Msa0736570 | Msa1371090 | 0.800421 | 1.452462e-48 | -8.615850e-47 |
| Msa0736570 | Msa1371240 | 0.809161 | 2.169738e-50 | -8.615850e-47 |
| Msa0736570 | Msa1383350 | 0.809644 | 1.708559e-50 | -8.615850e-47 |
| Msa0736570 | Msa1384100 | 0.800948 | 1.134251e-48 | -8.615850e-47 |
| Msa0736570 | Msa1388860 | 0.807244 | 5.556945e-50 | -8.615850e-47 |
| Msa0736570 | Msa1389850 | 0.810228 | 1.279655e-50 | -8.615850e-47 |
| Msa0736570 | Msa1396940 | 0.803489 | 3.402046e-49 | -8.615850e-47 |
| Msa0736570 | Msa1407190 | 0.804260 | 2.352871e-49 | -8.615850e-47 |
| Msa0736570 | Msa1407970 | 0.809403 | 1.925554e-50 | -8.615850e-47 |
| Msa0736570 | Msa1416260 | 0.816012 | 6.885023e-52 | -8.615850e-47 |
| Msa0736570 | Msa1426570 | 0.814803 | 1.278959e-51 | -8.615850e-47 |
| Msa0736570 | Msa1426920 | 0.815922 | 7.213490e-52 | -8.615850e-47 |
| Msa0736570 | Msa1428780 | 0.805941 | 1.046925e-49 | -8.615850e-47 |
| Msa0736570 | Msa1432130 | 0.807721 | 4.401100e-50 | -8.615850e-47 |
| Msa0736570 | Msa1442790 | 0.800457 | 1.428634e-48 | -8.615850e-47 |
| Msa0736570 | Msa1444120 | 0.803644 | 3.158876e-49 | -8.615850e-47 |
| Msa0736570 | Msa1458810 | 0.813144 | 2.969172e-51 | -8.615850e-47 |
| Msa0124550 | Msa0736570 | 0.802040 | 6.775212e-49 | -8.615850e-47 |
| Msa0126880 | Msa0736570 | 0.813432 | 2.567870e-51 | -8.615850e-47 |
| Msa0131450 | Msa0736570 | 0.807816 | 4.202294e-50 | -8.615850e-47 |
| Msa0140400 | Msa0736570 | 0.810823 | 9.514996e-51 | -8.615850e-47 |
| Msa0145110 | Msa0736570 | 0.801239 | 9.890559e-49 | -8.615850e-47 |
| Msa0169300 | Msa0736570 | 0.820325 | 7.282288e-53 | -8.615850e-47 |
| Msa0175200 | Msa0736570 | 0.819516 | 1.114762e-52 | -8.615850e-47 |
| Msa0183870 | Msa0736570 | 0.803609 | 3.212542e-49 | -8.615850e-47 |
| Msa0186310 | Msa0736570 | 0.811838 | 5.729152e-51 | -8.615850e-47 |
| Msa0187490 | Msa0736570 | 0.837010 | 6.688797e-57 | -8.615850e-47 |
| Msa0197610 | Msa0736570 | 0.821954 | 3.067028e-53 | -8.615850e-47 |
| Msa0200620 | Msa0736570 | 0.820832 | 5.568031e-53 | -8.615850e-47 |
| Msa0202930 | Msa0736570 | 0.802051 | 6.738954e-49 | -8.615850e-47 |
| Msa0223120 | Msa0736570 | 0.813749 | 2.186777e-51 | -8.615850e-47 |
| Msa0231790 | Msa0736570 | 0.813120 | 3.005814e-51 | -8.615850e-47 |
| Msa0365860 | Msa0736570 | 0.802875 | 4.558733e-49 | -8.615850e-47 |
| Msa0380100 | Msa0736570 | 0.803224 | 3.861071e-49 | -8.615850e-47 |
| Msa0384670 | Msa0736570 | 0.808928 | 2.433876e-50 | -8.615850e-47 |
| Msa0387050 | Msa0736570 | 0.800158 | 1.643085e-48 | -8.615850e-47 |
| Msa0387910 | Msa0736570 | 0.804303 | 2.304635e-49 | -8.615850e-47 |
| Msa0419520 | Msa0736570 | 0.808447 | 3.083900e-50 | -8.615850e-47 |
| Msa0430870 | Msa0736570 | 0.809037 | 2.305922e-50 | -8.615850e-47 |
| Msa0436190 | Msa0736570 | 0.824088 | 9.755269e-54 | -8.615850e-47 |
| Msa0439890 | Msa0736570 | 0.847142 | 1.394055e-59 | -8.615850e-47 |
| Msa0467220 | Msa0736570 | 0.806900 | 6.570689e-50 | -8.615850e-47 |
| Msa0481030 | Msa0736570 | 0.800280 | 1.551765e-48 | -8.615850e-47 |
| Msa0244980 | Msa0736570 | 0.802937 | 4.426857e-49 | -8.615850e-47 |
| Msa0247060 | Msa0736570 | 0.812696 | 3.722919e-51 | -8.615850e-47 |
| Msa0265160 | Msa0736570 | 0.808333 | 3.260456e-50 | -8.615850e-47 |
| Msa0284450 | Msa0736570 | 0.832522 | 9.008117e-56 | -8.615850e-47 |
| Msa0307560 | Msa0736570 | 0.810934 | 9.004014e-51 | -8.615850e-47 |
| Msa0320610 | Msa0736570 | 0.800568 | 1.356230e-48 | -8.615850e-47 |
| Msa0324240 | Msa0736570 | 0.821624 | 3.656500e-53 | -8.615850e-47 |
| Msa0339740 | Msa0736570 | 0.809496 | 1.838701e-50 | -8.615850e-47 |
| Msa0482940 | Msa0736570 | 0.800935 | 1.140991e-48 | -8.615850e-47 |
| Msa0505380 | Msa0736570 | 0.800448 | 1.434607e-48 | -8.615850e-47 |
| Msa0514610 | Msa0736570 | 0.803691 | 3.089317e-49 | -8.615850e-47 |
| Msa0524600 | Msa0736570 | 0.820554 | 6.451749e-53 | -8.615850e-47 |
| Msa0527910 | Msa0736570 | 0.801759 | 7.737776e-49 | -8.615850e-47 |
| Msa0530870 | Msa0736570 | -0.803073 | 4.149318e-49 | -8.615850e-47 |
| Msa0546570 | Msa0736570 | 0.812251 | 4.656324e-51 | -8.615850e-47 |
| Msa0550540 | Msa0736570 | 0.820850 | 5.516469e-53 | -8.615850e-47 |
| Msa0550570 | Msa0736570 | 0.834713 | 2.556402e-56 | -8.615850e-47 |
| Msa0555640 | Msa0736570 | 0.824801 | 6.629182e-54 | -8.615850e-47 |
| Msa0556790 | Msa0736570 | 0.804774 | 1.838071e-49 | -8.615850e-47 |
| Msa0602370 | Msa0736570 | 0.811638 | 6.333755e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0736570 | MtrunA17_Chr5g0434011 | 99.565 | 460 | 2 | 0 | 1 | 460 | 1 | 460 | 0.0 | 932 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0736570 | AT5G37370.1 | 72.569 | 288 | 47 | 5 | 2 | 287 | 3 | 260 | 9.12e-145 | 419 |
| Msa0736570 | AT5G37370.2 | 70.486 | 288 | 45 | 5 | 2 | 287 | 3 | 252 | 8.48e-139 | 404 |
| Msa0736570 | AT5G37370.4 | 69.362 | 235 | 40 | 5 | 55 | 287 | 1 | 205 | 1.54e-107 | 322 |
| Msa0736570 | AT5G37370.8 | 89.583 | 96 | 10 | 0 | 2 | 97 | 3 | 98 | 2.95e-59 | 190 |
| Msa0736570 | AT5G37370.11 | 89.583 | 96 | 10 | 0 | 2 | 97 | 3 | 98 | 2.95e-59 | 190 |
| Msa0736570 | AT5G37370.3 | 88.542 | 96 | 11 | 0 | 2 | 97 | 3 | 98 | 4.25e-59 | 189 |
| Msa0736570 | AT5G37370.12 | 88.542 | 96 | 11 | 0 | 2 | 97 | 3 | 98 | 4.25e-59 | 189 |
| Msa0736570 | AT5G37370.10 | 89.474 | 95 | 10 | 0 | 2 | 96 | 3 | 97 | 4.64e-58 | 186 |
| Msa0736570 | AT5G37370.9 | 89.474 | 95 | 10 | 0 | 2 | 96 | 3 | 97 | 4.64e-58 | 186 |
| Msa0736570 | AT5G37370.6 | 59.236 | 157 | 32 | 5 | 133 | 287 | 1 | 127 | 3.32e-48 | 166 |
| Msa0736570 | AT5G37370.7 | 59.236 | 157 | 32 | 5 | 133 | 287 | 1 | 127 | 3.32e-48 | 166 |
| Msa0736570 | AT5G37370.5 | 59.236 | 157 | 32 | 5 | 133 | 287 | 1 | 127 | 3.32e-48 | 166 |
Find 173 sgRNAs with CRISPR-Local
Find 484 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCTCATCATCACATATTT+TGG | 0.108318 | 5_1:-53095132 | Msa0736570:CDS |
| ATGTATACTAAATTTATTTC+TGG | 0.164634 | 5_1:-53092658 | Msa0736570:three_prime_UTR |
| AACCAATCTCTTCGTGTAAT+TGG | 0.206631 | 5_1:-53099189 | Msa0736570:intron |
| AAAGATTTGTACGGTGATTT+AGG | 0.215552 | 5_1:-53092930 | Msa0736570:CDS |
| TCCCTGTCCCTATCCCTTTC+AGG | 0.221156 | 5_1:+53093350 | None:intergenic |
| GCTGCCCTTTCAGTCTCTTT+TGG | 0.266936 | 5_1:-53093509 | Msa0736570:CDS |
| TCACCACTATTATCCCTTCT+AGG | 0.271633 | 5_1:+53092873 | None:intergenic |
| TTAGACTTGGTGGCTCTTCT+TGG | 0.285751 | 5_1:-53092842 | Msa0736570:CDS |
| AACCAGCTCCACAGAGTCTT+TGG | 0.285766 | 5_1:+53096358 | None:intergenic |
| CACGTTCCCTATCCCTTTCT+CGG | 0.292416 | 5_1:+53093303 | None:intergenic |
| CTTGTGATGCACCTGGATTC+TGG | 0.297506 | 5_1:+53095173 | None:intergenic |
| GCTCTGACTGCGATGATTGC+TGG | 0.309396 | 5_1:+53093382 | None:intergenic |
| ACTTGGTTGACATAAGTTAT+AGG | 0.309738 | 5_1:-53092717 | Msa0736570:three_prime_UTR |
| TGATTCTGAGGCTTAGGTTT+GGG | 0.318766 | 5_1:+53099242 | None:intergenic |
| ACCTGACGCATTACAGGAAC+TGG | 0.327476 | 5_1:+53093641 | None:intergenic |
| GCCACAACCTGACGCATTAC+AGG | 0.330998 | 5_1:+53093635 | None:intergenic |
| GCGTCAGGTTGTGGCAAATC+TGG | 0.336533 | 5_1:-53093627 | Msa0736570:CDS |
| TTCTAATGTTGAATACCTTT+AGG | 0.346432 | 5_1:-53092521 | Msa0736570:three_prime_UTR |
| AAAGGGATAGGGAACGTGAT+AGG | 0.370047 | 5_1:-53093298 | Msa0736570:CDS |
| AGAGAAGTTATGATTATGAT+AGG | 0.373861 | 5_1:-53093163 | Msa0736570:CDS |
| GCTCTTATGTAAGGAGAATC+AGG | 0.377200 | 5_1:+53097792 | None:intergenic |
| ACAGGGAGCGGTCACGCTCC+AGG | 0.378200 | 5_1:-53093334 | Msa0736570:CDS |
| CCTTTCTCGGTCCCTGTCCC+TGG | 0.381415 | 5_1:+53093316 | None:intergenic |
| CATGGCGTGCGGTGCCAACT+TGG | 0.388924 | 5_1:+53093021 | None:intergenic |
| AGCGGTCACGCTCCAGGGAC+AGG | 0.394319 | 5_1:-53093328 | Msa0736570:CDS |
| TATATCCGTGATTTGCTCCT+TGG | 0.397027 | 5_1:-53095427 | Msa0736570:CDS |
| ACCGAGATGCTGAAAGATAC+AGG | 0.397891 | 5_1:-53093244 | Msa0736570:CDS |
| ATATCTCATCAATAACTTCA+TGG | 0.399120 | 5_1:+53097946 | None:intergenic |
| CTCTCGGTCCCTATCCCTCC+TGG | 0.402821 | 5_1:+53093184 | None:intergenic |
| CTGCTTGACAGTGAGCTTCA+TGG | 0.403160 | 5_1:+53097836 | None:intergenic |
| CTCGGTCCTTGTTCCTATCT+CGG | 0.405225 | 5_1:+53093261 | None:intergenic |
| CATTGCCTTTCATTATCACT+TGG | 0.408079 | 5_1:-53092734 | Msa0736570:three_prime_UTR |
| TTGATTCTGAGGCTTAGGTT+TGG | 0.410927 | 5_1:+53099241 | None:intergenic |
| GGGACAGATCCAGGAGGGAT+AGG | 0.413562 | 5_1:-53093193 | Msa0736570:CDS |
| ATCATGGAGATACAGACTTC+TGG | 0.414622 | 5_1:-53098059 | Msa0736570:CDS |
| TCCTGTAATGCGTCAGGTTG+TGG | 0.416923 | 5_1:-53093636 | Msa0736570:CDS |
| CCAGGGACAGGGACCGAGAA+AGG | 0.423524 | 5_1:-53093316 | Msa0736570:CDS |
| AAGTCTAAAACTTGCAAAGC+AGG | 0.424980 | 5_1:+53092623 | None:intergenic |
| CCGTGATTTGCTCCTTGGAC+AGG | 0.429155 | 5_1:-53095422 | Msa0736570:intron |
| TTCTTCACCCATTCGTCGTA+CGG | 0.437084 | 5_1:-53093453 | Msa0736570:CDS |
| CTCTGACTGCGATGATTGCT+GGG | 0.437763 | 5_1:+53093383 | None:intergenic |
| ACAGGGACCGAGAAAGGGAT+AGG | 0.439373 | 5_1:-53093310 | Msa0736570:CDS |
| TTCTCTAGCAAGGACTCAAT+TGG | 0.441660 | 5_1:+53098032 | None:intergenic |
| CCCTGTATCTTTCAGCATCT+CGG | 0.447442 | 5_1:+53093243 | None:intergenic |
| ACAGGGATCGGGACCGGGAT+AGG | 0.448801 | 5_1:-53093226 | Msa0736570:CDS |
| ACCTCATCATCCTTTGCATA+TGG | 0.450018 | 5_1:+53096331 | None:intergenic |
| ACATGGAAAGAATTCCTAGA+AGG | 0.450119 | 5_1:-53092887 | Msa0736570:CDS |
| ATCCAAAGACTCTGTGGAGC+TGG | 0.453230 | 5_1:-53096360 | Msa0736570:CDS |
| CCCAGTTCCTGTAATGCGTC+AGG | 0.457842 | 5_1:-53093642 | Msa0736570:CDS |
| GCTGTCTAGATGCAAATTGA+TGG | 0.467171 | 5_1:-53092432 | Msa0736570:three_prime_UTR |
| TACCAATTACACGAAGAGAT+TGG | 0.478209 | 5_1:+53099187 | None:intergenic |
| TGCCAACTTGGCTCTGACTT+CGG | 0.478380 | 5_1:+53093033 | None:intergenic |
| TTTAAAGCTAAAACTCCTAA+AGG | 0.479611 | 5_1:+53092506 | None:intergenic |
| GTGAATATCCTGAAAGGGAT+AGG | 0.479720 | 5_1:-53093358 | Msa0736570:CDS |
| AAAGATACAGGGATCGGGAC+CGG | 0.479933 | 5_1:-53093232 | Msa0736570:CDS |
| AGAAGACAGAAAGCAGTTGA+AGG | 0.479991 | 5_1:+53097873 | None:intergenic |
| CGCCACATCGAGCCTCTACA+AGG | 0.483631 | 5_1:-53093478 | Msa0736570:CDS |
| CTACATACCGCTCTTATGTA+AGG | 0.483855 | 5_1:+53097783 | None:intergenic |
| ACAGCATTGGCAATGGTAGT+AGG | 0.483968 | 5_1:-53093097 | Msa0736570:CDS |
| ACTATGAGAGGGACAGATCC+AGG | 0.484456 | 5_1:-53093202 | Msa0736570:CDS |
| ACAGATATTATGACCGAGAT+AGG | 0.486094 | 5_1:-53093274 | Msa0736570:CDS |
| ATCCTGAAAGGGATAGGGAC+AGG | 0.486555 | 5_1:-53093352 | Msa0736570:CDS |
| CTTTCACAGAAGGTGGTCTA+CGG | 0.486987 | 5_1:+53093531 | None:intergenic |
| GTTTGGGTAATCGAAAAGAA+TGG | 0.488048 | 5_1:+53099258 | None:intergenic |
| GGACAGATCCAGGAGGGATA+GGG | 0.488374 | 5_1:-53093192 | Msa0736570:CDS |
| TCTAGGAATTCTTTCCATGT+TGG | 0.493850 | 5_1:+53092890 | None:intergenic |
| GGTGAAGAGGTTATTAGACT+TGG | 0.496955 | 5_1:-53092855 | Msa0736570:CDS |
| TATCCCTTTCAGGATATTCA+CGG | 0.497547 | 5_1:+53093360 | None:intergenic |
| TTGCATTCTTGTGATGCACC+TGG | 0.498317 | 5_1:+53095166 | None:intergenic |
| ACGACATCAGATTATTGACT+TGG | 0.498873 | 5_1:+53092483 | None:intergenic |
| GTCGTACCACAATGTGTAGT+AGG | 0.500096 | 5_1:+53093590 | None:intergenic |
| CATGTGGAACCATGGATGAC+GGG | 0.500480 | 5_1:-53097909 | Msa0736570:CDS |
| CAGGGATCGGGACCGGGATA+GGG | 0.504741 | 5_1:-53093225 | Msa0736570:CDS |
| CTCACTGTCAAGCAGATGCA+TGG | 0.508388 | 5_1:-53097828 | Msa0736570:CDS |
| GCAGGTACCGTACGACGAAT+GGG | 0.512160 | 5_1:+53093446 | None:intergenic |
| AGCAGGTACCGTACGACGAA+TGG | 0.515431 | 5_1:+53093445 | None:intergenic |
| GAAGAGGTTATTAGACTTGG+TGG | 0.517064 | 5_1:-53092852 | Msa0736570:CDS |
| TGCTGAAAGATACAGGGATC+GGG | 0.517734 | 5_1:-53093237 | Msa0736570:CDS |
| AAGGGATAGGGAACGTGATA+GGG | 0.519008 | 5_1:-53093297 | Msa0736570:CDS |
| ACGCAGAGAGAGAAAGTAGC+CGG | 0.520155 | 5_1:-53093130 | Msa0736570:CDS |
| AAGATACAGGGATCGGGACC+GGG | 0.522026 | 5_1:-53093231 | Msa0736570:CDS |
| GTCATCCGTCCATTAGATCC+AGG | 0.523423 | 5_1:+53095463 | None:intergenic |
| CGCTCTAGTCCACAGAGAGA+TGG | 0.529001 | 5_1:-53092993 | Msa0736570:CDS |
| CGACAGTTCCCCGTCATCCA+TGG | 0.535024 | 5_1:+53097900 | None:intergenic |
| AGCCGAAGTCAGAGCCAAGT+TGG | 0.536221 | 5_1:-53093035 | Msa0736570:CDS |
| ACTACACATTGTGGTACGAC+AGG | 0.536972 | 5_1:-53093587 | Msa0736570:CDS |
| AAAGGGATAGGGACAGGGAG+CGG | 0.538983 | 5_1:-53093346 | Msa0736570:CDS |
| TTTCACAGAAGGTGGTCTAC+GGG | 0.540490 | 5_1:+53093532 | None:intergenic |
| AGTGTCATCAGAACCGTGAC+GGG | 0.541768 | 5_1:+53093556 | None:intergenic |
| CCCTCTCATAGTCCCTATCC+CGG | 0.545144 | 5_1:+53093213 | None:intergenic |
| CATAATCATAACTTCTCTCT+CGG | 0.545819 | 5_1:+53093168 | None:intergenic |
| CAGGGAGCGGTCACGCTCCA+GGG | 0.545850 | 5_1:-53093333 | Msa0736570:CDS |
| GTCAACCAAGTGATAATGAA+AGG | 0.549160 | 5_1:+53092729 | None:intergenic |
| CGCAGAGAGAGAAAGTAGCC+GGG | 0.549213 | 5_1:-53093129 | Msa0736570:CDS |
| AAGGGATAATAGTGGTGAAG+AGG | 0.549270 | 5_1:-53092868 | Msa0736570:CDS |
| CAGGGACAGGGACCGAGAAA+GGG | 0.551544 | 5_1:-53093315 | Msa0736570:CDS |
| CAGGGACCGAGAAAGGGATA+GGG | 0.551648 | 5_1:-53093309 | Msa0736570:CDS |
| TGACAAAATTGTGTAACTGT+TGG | 0.551754 | 5_1:-53098112 | Msa0736570:five_prime_UTR |
| TGTGTAACTGTTGGAGTGAG+AGG | 0.551897 | 5_1:-53098103 | Msa0736570:five_prime_UTR |
| CTCCAAAATATGTGATGATG+AGG | 0.552372 | 5_1:+53095130 | None:intergenic |
| GAAGTTATGATTATGATAGG+AGG | 0.553854 | 5_1:-53093160 | Msa0736570:CDS |
| GAGCTCTACTACCAGAATCC+AGG | 0.555398 | 5_1:-53095184 | Msa0736570:CDS |
| GTCGGAGTAGAAGTAGGAGC+AGG | 0.556706 | 5_1:-53093058 | Msa0736570:CDS |
| GCGGTCACGCTCCAGGGACA+GGG | 0.556793 | 5_1:-53093327 | Msa0736570:CDS |
| CGGGATTATGACAACAGCAT+TGG | 0.559737 | 5_1:-53093110 | Msa0736570:CDS |
| AGAATGCTTGTATCTGATGC+CGG | 0.561175 | 5_1:-53092800 | Msa0736570:three_prime_UTR |
| GAGCCGTGAATATCCTGAAA+GGG | 0.564193 | 5_1:-53093363 | Msa0736570:CDS |
| GCTAAACTTAAAGATTTGTA+CGG | 0.567299 | 5_1:-53092939 | Msa0736570:CDS |
| CAATGCTGTTGTCATAATCC+CGG | 0.569029 | 5_1:+53093111 | None:intergenic |
| CATGGAAAGAATTCCTAGAA+GGG | 0.569552 | 5_1:-53092886 | Msa0736570:CDS |
| GCTGACCAAAAGAGACTGAA+AGG | 0.571040 | 5_1:+53093504 | None:intergenic |
| TGAATATCCTGAAAGGGATA+GGG | 0.572865 | 5_1:-53093357 | Msa0736570:CDS |
| GTAGGAGTCGGAGTAGAAGT+AGG | 0.573084 | 5_1:-53093064 | Msa0736570:CDS |
| ATGCTGAAAGATACAGGGAT+CGG | 0.578326 | 5_1:-53093238 | Msa0736570:CDS |
| GTAGTAGGCGCCATCGCAGT+AGG | 0.582103 | 5_1:-53093082 | Msa0736570:CDS |
| GCAAAGGACTTTCTCTAGCA+AGG | 0.583455 | 5_1:+53098022 | None:intergenic |
| GTGTAACTGTTGGAGTGAGA+GGG | 0.583469 | 5_1:-53098102 | Msa0736570:five_prime_UTR |
| GTGGACTAGAGCGTGAGTCA+TGG | 0.585031 | 5_1:+53093003 | None:intergenic |
| AGTCTAAAACTTGCAAAGCA+GGG | 0.585675 | 5_1:+53092624 | None:intergenic |
| TCGTACCACAATGTGTAGTA+GGG | 0.586324 | 5_1:+53093591 | None:intergenic |
| TTTCTCCTGGATCTAATGGA+CGG | 0.588245 | 5_1:-53095468 | Msa0736570:CDS |
| ATTCCTAGAAGGGATAATAG+TGG | 0.588421 | 5_1:-53092876 | Msa0736570:CDS |
| GAAAGGGCAGCTTTCACAGA+AGG | 0.590339 | 5_1:+53093521 | None:intergenic |
| GGCGCCATCGCAGTAGGAGT+CGG | 0.590973 | 5_1:-53093076 | Msa0736570:CDS |
| ACCGGGATAGGGACTATGAG+AGG | 0.593083 | 5_1:-53093214 | Msa0736570:CDS |
| TTCTTACTTCCATCTCTCTG+TGG | 0.595516 | 5_1:+53092984 | None:intergenic |
| CTACACATTGTGGTACGACA+GGG | 0.597615 | 5_1:-53093586 | Msa0736570:CDS |
| TACTCCGACTCCTACTGCGA+TGG | 0.600763 | 5_1:+53093072 | None:intergenic |
| ATGACAGAATATTCATGCAA+AGG | 0.601691 | 5_1:+53098006 | None:intergenic |
| TGGAGATACAGACTTCTGGC+AGG | 0.602465 | 5_1:-53098055 | Msa0736570:CDS |
| CTGACCAAAAGAGACTGAAA+GGG | 0.606327 | 5_1:+53093505 | None:intergenic |
| AAGCAAAGGAGATGCCAACA+TGG | 0.607508 | 5_1:-53092904 | Msa0736570:CDS |
| TATGACAACAGCATTGGCAA+TGG | 0.607613 | 5_1:-53093104 | Msa0736570:CDS |
| TCACTGTCAAGCAGATGCAT+GGG | 0.608557 | 5_1:-53097827 | Msa0736570:CDS |
| CCGAGATGCTGAAAGATACA+GGG | 0.609600 | 5_1:-53093243 | Msa0736570:CDS |
| TCCTGAAAGGGATAGGGACA+GGG | 0.610463 | 5_1:-53093351 | Msa0736570:CDS |
| CAGTGTCATCAGAACCGTGA+CGG | 0.611533 | 5_1:+53093555 | None:intergenic |
| AAAGATAACGAACCTGTCCA+AGG | 0.612596 | 5_1:+53095410 | None:intergenic |
| AGAGCCGTGAATATCCTGAA+AGG | 0.614212 | 5_1:-53093364 | Msa0736570:CDS |
| CTGGTTTGAGCCATATGCAA+AGG | 0.614974 | 5_1:-53096341 | Msa0736570:CDS |
| ATACAATCAAGTTGATCATG+TGG | 0.617743 | 5_1:-53097925 | Msa0736570:CDS |
| TCAACTGAACAATGGAAGCA+TGG | 0.617767 | 5_1:+53092572 | None:intergenic |
| GATAATGAAAGGCAATGCAA+AGG | 0.618209 | 5_1:+53092740 | None:intergenic |
| AATGGACGGATGACTACGAT+GGG | 0.618551 | 5_1:-53095454 | Msa0736570:CDS |
| ACAGGGGAAACCACCCGTCA+CGG | 0.619623 | 5_1:-53093569 | Msa0736570:CDS |
| AGGGCAGCTTTCACAGAAGG+TGG | 0.621262 | 5_1:+53093524 | None:intergenic |
| CCTGTCCAAGGAGCAAATCA+CGG | 0.626413 | 5_1:+53095422 | None:intergenic |
| GCCATATGCAAAGGATGATG+AGG | 0.627558 | 5_1:-53096332 | Msa0736570:intron |
| TCATGTGGAACCATGGATGA+CGG | 0.627735 | 5_1:-53097910 | Msa0736570:CDS |
| TGTAACTGTTGGAGTGAGAG+GGG | 0.627998 | 5_1:-53098101 | Msa0736570:five_prime_UTR |
| TGGATGACGGGGAACTGTCG+TGG | 0.628076 | 5_1:-53097897 | Msa0736570:CDS |
| CTCTTATGTAAGGAGAATCA+GGG | 0.628997 | 5_1:+53097793 | None:intergenic |
| GGGTGAAGAATCCCTTGTAG+AGG | 0.636783 | 5_1:+53093466 | None:intergenic |
| AAGTTGATCATGTGGAACCA+TGG | 0.636947 | 5_1:-53097917 | Msa0736570:CDS |
| TAATGGACGGATGACTACGA+TGG | 0.637953 | 5_1:-53095455 | Msa0736570:CDS |
| ATTACAGGAACTGGGATGCG+AGG | 0.640293 | 5_1:+53093650 | None:intergenic |
| ACATAGTTTCAACTGAACAA+TGG | 0.642080 | 5_1:+53092564 | None:intergenic |
| CCTGACGCATTACAGGAACT+GGG | 0.642825 | 5_1:+53093642 | None:intergenic |
| ATGCTGATCCAAAGACTCTG+TGG | 0.643414 | 5_1:-53096366 | Msa0736570:CDS |
| AAACTCCCTACTACACATTG+TGG | 0.647894 | 5_1:-53093596 | Msa0736570:CDS |
| GTCATCAGAACCGTGACGGG+TGG | 0.647960 | 5_1:+53093559 | None:intergenic |
| ATGTGGAACCATGGATGACG+GGG | 0.653377 | 5_1:-53097908 | Msa0736570:CDS |
| CCGGGATAGGGACTATGAGA+GGG | 0.668727 | 5_1:-53093213 | Msa0736570:CDS |
| AGAGCGTGAGTCATGGCGTG+CGG | 0.670383 | 5_1:+53093010 | None:intergenic |
| TGAGAGGGACAGATCCAGGA+GGG | 0.674889 | 5_1:-53093198 | Msa0736570:CDS |
| TGATTCTCCTTACATAAGAG+CGG | 0.678807 | 5_1:-53097790 | Msa0736570:intron |
| TCCCTTGTAGAGGCTCGATG+TGG | 0.691841 | 5_1:+53093476 | None:intergenic |
| TGTCAAATGTTGACTCTCGG+CGG | 0.693107 | 5_1:+53098130 | None:intergenic |
| TACACATTGTGGTACGACAG+GGG | 0.693296 | 5_1:-53093585 | Msa0736570:CDS |
| TTATGACCGAGATAGGAACA+AGG | 0.707631 | 5_1:-53093267 | Msa0736570:CDS |
| GGTGATTTAGGTGAAAGCAA+AGG | 0.714464 | 5_1:-53092918 | Msa0736570:CDS |
| GCCACATCGAGCCTCTACAA+GGG | 0.725791 | 5_1:-53093477 | Msa0736570:CDS |
| ATGAGAGGGACAGATCCAGG+AGG | 0.739775 | 5_1:-53093199 | Msa0736570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTAAATTCTTTTTATATG+TGG | + | chr5_1:53093132-53093151 | None:intergenic | 10.0% |
| !!! | AAAATTTAATTTTATCTATG+AGG | - | chr5_1:53095817-53095836 | Msa0736570:intron | 10.0% |
| !!! | AAATTTAATTTTATCTATGA+GGG | - | chr5_1:53095818-53095837 | Msa0736570:intron | 10.0% |
| !! | TTTAAAAATCTAAATATCAA+GGG | + | chr5_1:53096386-53096405 | None:intergenic | 10.0% |
| !! | ATAAAATTAAAAAAGTAGAA+AGG | + | chr5_1:53097053-53097072 | None:intergenic | 10.0% |
| !! | TTTATTGGAAATTGTAAATT+GGG | + | chr5_1:53092569-53092588 | None:intergenic | 15.0% |
| !!! | TTTTATTGGAAATTGTAAAT+TGG | + | chr5_1:53092570-53092589 | None:intergenic | 15.0% |
| !! | ATTTACAATTTCCAATAAAA+AGG | - | chr5_1:53092570-53092589 | Msa0736570:three_prime_UTR | 15.0% |
| !! | TTTACAATTTCCAATAAAAA+GGG | - | chr5_1:53092571-53092590 | Msa0736570:three_prime_UTR | 15.0% |
| !!! | AAAAAAAAAACCCTTTTTAT+TGG | + | chr5_1:53092584-53092603 | None:intergenic | 15.0% |
| !! | AGAAAATTAACTACTAATAA+GGG | + | chr5_1:53092890-53092909 | None:intergenic | 15.0% |
| !! | AAGAAAATTAACTACTAATA+AGG | + | chr5_1:53092891-53092910 | None:intergenic | 15.0% |
| !!! | TACTTGTTTGATTTAAATTA+TGG | - | chr5_1:53094101-53094120 | Msa0736570:intron | 15.0% |
| !!! | ACTTGTTTGATTTAAATTAT+GGG | - | chr5_1:53094102-53094121 | Msa0736570:intron | 15.0% |
| !! | TTAAATAATCATGGATATTA+CGG | + | chr5_1:53094962-53094981 | None:intergenic | 15.0% |
| !! | CTAAAAGCTAAAATTAAAAA+AGG | + | chr5_1:53095175-53095194 | None:intergenic | 15.0% |
| !!! | CTTTTTTAATTTTAGCTTTT+AGG | - | chr5_1:53095173-53095192 | Msa0736570:CDS | 15.0% |
| !! | AAAAACTTAATAAATGACAT+TGG | + | chr5_1:53095406-53095425 | None:intergenic | 15.0% |
| !!! | AATTTAATTTTATCTATGAG+GGG | - | chr5_1:53095819-53095838 | Msa0736570:intron | 15.0% |
| !! | GTTTAAAAATCTAAATATCA+AGG | + | chr5_1:53096387-53096406 | None:intergenic | 15.0% |
| !! | TTTAAACATAATGACTTATA+AGG | - | chr5_1:53096400-53096419 | Msa0736570:intron | 15.0% |
| !!! | TAATCAAATTGTTAGATTTT+GGG | - | chr5_1:53096825-53096844 | Msa0736570:intron | 15.0% |
| !! | TTTCAAATTTGATAAAATTG+AGG | - | chr5_1:53096947-53096966 | Msa0736570:intron | 15.0% |
| !! | TTCAAATTTGATAAAATTGA+GGG | - | chr5_1:53096948-53096967 | Msa0736570:intron | 15.0% |
| !! | TTTATTAAAAGAAGCAAATA+AGG | + | chr5_1:53097480-53097499 | None:intergenic | 15.0% |
| !!! | TCTTTTAATAAATACTACTT+AGG | - | chr5_1:53097488-53097507 | Msa0736570:intron | 15.0% |
| !!! | CTTTTAATAAATACTACTTA+GGG | - | chr5_1:53097489-53097508 | Msa0736570:intron | 15.0% |
| !! | TTTATTAAAAGAAGCAAATA+AGG | + | chr5_1:53097480-53097499 | None:intergenic | 15.0% |
| !!! | TCTTTTAATAAATACTACTT+AGG | - | chr5_1:53097488-53097507 | Msa0736570:intron | 15.0% |
| !!! | CTTTTAATAAATACTACTTA+GGG | - | chr5_1:53097489-53097508 | Msa0736570:intron | 15.0% |
| !! | ATGTATACTAAATTTATTTC+TGG | - | chr5_1:53099009-53099028 | Msa0736570:intron | 15.0% |
| !! | TTATTGGAAATTGTAAATTG+GGG | + | chr5_1:53092568-53092587 | None:intergenic | 20.0% |
| !! | AACGAAAGAAAATAAATCAT+GGG | + | chr5_1:53092612-53092631 | None:intergenic | 20.0% |
| !! | AAACGAAAGAAAATAAATCA+TGG | + | chr5_1:53092613-53092632 | None:intergenic | 20.0% |
| !!! | TGATTTATTTTCTTTCGTTT+AGG | - | chr5_1:53092613-53092632 | Msa0736570:three_prime_UTR | 20.0% |
| !!! | GATTTATTTTCTTTCGTTTA+GGG | - | chr5_1:53092614-53092633 | Msa0736570:three_prime_UTR | 20.0% |
| !! | AATTCAAATAGTAGAAAGAA+GGG | + | chr5_1:53092660-53092679 | None:intergenic | 20.0% |
| !!! | TGAATTATTTGTTGAATTAC+TGG | - | chr5_1:53092745-53092764 | Msa0736570:three_prime_UTR | 20.0% |
| !!! | TTTGTTTTTTCTTTTGTTGT+AGG | - | chr5_1:53093485-53093504 | Msa0736570:CDS | 20.0% |
| !! | TAAATAATCATGGATATTAC+GGG | + | chr5_1:53094961-53094980 | None:intergenic | 20.0% |
| !! | CTAAAAGACTTAAATAATCA+TGG | + | chr5_1:53094971-53094990 | None:intergenic | 20.0% |
| !! | ACAAGATAAAATGGATATAA+GGG | + | chr5_1:53095225-53095244 | None:intergenic | 20.0% |
| !! | TCTAATTGTAAACTAAATAG+AGG | - | chr5_1:53095600-53095619 | Msa0736570:intron | 20.0% |
| !! | TACCAAAATCTTGATAAATT+TGG | + | chr5_1:53095983-53096002 | None:intergenic | 20.0% |
| !! | AAACAAATAACTATCTTTCA+TGG | + | chr5_1:53096039-53096058 | None:intergenic | 20.0% |
| !! | ATGAAAGATAGTTATTTGTT+TGG | - | chr5_1:53096038-53096057 | Msa0736570:intron | 20.0% |
| !! | TGAAAGATAGTTATTTGTTT+GGG | - | chr5_1:53096039-53096058 | Msa0736570:intron | 20.0% |
| !!! | TCGAATGAATATCTATTTTA+GGG | - | chr5_1:53096073-53096092 | Msa0736570:intron | 20.0% |
| !!! | AGTTAAATAATAATTTTCCC+TGG | + | chr5_1:53096426-53096445 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTCCTTTTTACCA+CGG | - | chr5_1:53096659-53096678 | Msa0736570:intron | 20.0% |
| !!! | GTAATCAAATTGTTAGATTT+TGG | - | chr5_1:53096824-53096843 | Msa0736570:intron | 20.0% |
| !! | ATTAAAAAAGTAGAAAGGAA+TGG | + | chr5_1:53097048-53097067 | None:intergenic | 20.0% |
| !! | AAAAATGTTAAGGGAAATAT+AGG | + | chr5_1:53097295-53097314 | None:intergenic | 20.0% |
| !!! | ATTCAAACTTTTGATATTCT+TGG | - | chr5_1:53097353-53097372 | Msa0736570:intron | 20.0% |
| !!! | TAGACTTAATGATCATTTTA+TGG | - | chr5_1:53099060-53099079 | Msa0736570:intron | 20.0% |
| ! | TATTGGAAATTGTAAATTGG+GGG | + | chr5_1:53092567-53092586 | None:intergenic | 25.0% |
| ! | ATTCAAATAGTAGAAAGAAG+GGG | + | chr5_1:53092659-53092678 | None:intergenic | 25.0% |
| ! | GAATTCAAATAGTAGAAAGA+AGG | + | chr5_1:53092661-53092680 | None:intergenic | 25.0% |
| !!! | ATAAGTTTTGTTTGACTGTT+TGG | - | chr5_1:53093038-53093057 | Msa0736570:CDS | 25.0% |
| !!! | TAAGTTTTGTTTGACTGTTT+GGG | - | chr5_1:53093039-53093058 | Msa0736570:CDS | 25.0% |
| ! | TTTACCATATGAGTTACATA+TGG | - | chr5_1:53093308-53093327 | Msa0736570:CDS | 25.0% |
| ! | TTACCATATGAGTTACATAT+GGG | - | chr5_1:53093309-53093328 | Msa0736570:CDS | 25.0% |
| ! | ATAGAAGAACATAATAGAAC+TGG | + | chr5_1:53093431-53093450 | None:intergenic | 25.0% |
| !!! | CATTGTTACAATTGTTGTTT+TGG | - | chr5_1:53093451-53093470 | Msa0736570:CDS | 25.0% |
| ! | ATATCTCATCAATAACTTCA+TGG | + | chr5_1:53093724-53093743 | None:intergenic | 25.0% |
| !! | TATTTTCTTGATATGCAAGA+TGG | + | chr5_1:53094042-53094061 | None:intergenic | 25.0% |
| ! | ATTTAAATTATGGGTCTGTT+TGG | - | chr5_1:53094111-53094130 | Msa0736570:intron | 25.0% |
| ! | TTATAAGCTACTCTGTATAT+TGG | + | chr5_1:53094254-53094273 | None:intergenic | 25.0% |
| ! | TGAAATGTTATAACAGAGTT+TGG | - | chr5_1:53094421-53094440 | Msa0736570:intron | 25.0% |
| !!! | TTTTTCAAAAATCGACAACT+TGG | + | chr5_1:53094630-53094649 | None:intergenic | 25.0% |
| !! | AATACTATGTTTTATACCAC+AGG | - | chr5_1:53095004-53095023 | Msa0736570:intron | 25.0% |
| ! | ATGAAAACTAGAAGTAAAAG+AGG | + | chr5_1:53095092-53095111 | None:intergenic | 25.0% |
| ! | CACAAGATAAAATGGATATA+AGG | + | chr5_1:53095226-53095245 | None:intergenic | 25.0% |
| !!! | GATTTTGAAATTTATCGCTT+TGG | - | chr5_1:53095369-53095388 | Msa0736570:intron | 25.0% |
| ! | TAATAAATGACATTGGATGA+CGG | + | chr5_1:53095399-53095418 | None:intergenic | 25.0% |
| ! | CTTTCTTATGATATCAACTA+TGG | + | chr5_1:53095561-53095580 | None:intergenic | 25.0% |
| !! | TTGAAAATGGTCTTACATTA+AGG | - | chr5_1:53095659-53095678 | Msa0736570:intron | 25.0% |
| !! | TGAAAATGGTCTTACATTAA+GGG | - | chr5_1:53095660-53095679 | Msa0736570:intron | 25.0% |
| ! | GATAAAGAAATATGAGAAGT+AGG | - | chr5_1:53095682-53095701 | Msa0736570:intron | 25.0% |
| !! | AGAAGTAGGTCTTATAATTA+GGG | - | chr5_1:53095696-53095715 | Msa0736570:intron | 25.0% |
| !! | AGCCAAATTTATCAAGATTT+TGG | - | chr5_1:53095978-53095997 | Msa0736570:intron | 25.0% |
| ! | ATAACTATCTTTCATGGAAA+AGG | + | chr5_1:53096033-53096052 | None:intergenic | 25.0% |
| !! | GTCGAATGAATATCTATTTT+AGG | - | chr5_1:53096072-53096091 | Msa0736570:intron | 25.0% |
| ! | CAAATGCATTTAGATGATAA+CGG | - | chr5_1:53096344-53096363 | Msa0736570:CDS | 25.0% |
| !! | TTTCACACTTTCAAGATTTT+TGG | - | chr5_1:53096576-53096595 | Msa0736570:intron | 25.0% |
| ! | AGTATACTTATAAGAATTGC+TGG | + | chr5_1:53096622-53096641 | None:intergenic | 25.0% |
| !! | TAAATACTCAGTTTTCTTCT+GGG | + | chr5_1:53096728-53096747 | None:intergenic | 25.0% |
| !! | TTAAATACTCAGTTTTCTTC+TGG | + | chr5_1:53096729-53096748 | None:intergenic | 25.0% |
| !!! | AATAAGACTTATTTTAGTCC+TGG | - | chr5_1:53096766-53096785 | Msa0736570:intron | 25.0% |
| !!! | TTATTTTAGTCCTGGTTAAA+GGG | - | chr5_1:53096774-53096793 | Msa0736570:intron | 25.0% |
| !! | TAATAGAAACACTATCCTTT+TGG | + | chr5_1:53096885-53096904 | None:intergenic | 25.0% |
| ! | AAGTAGAATACTATTCTTCA+AGG | - | chr5_1:53096921-53096940 | Msa0736570:intron | 25.0% |
| ! | AGTAGAATACTATTCTTCAA+GGG | - | chr5_1:53096922-53096941 | Msa0736570:intron | 25.0% |
| ! | AAATTTGATAAAATTGAGGG+AGG | - | chr5_1:53096951-53096970 | Msa0736570:intron | 25.0% |
| ! | ATGCAAAATTAATGACACAT+AGG | + | chr5_1:53097110-53097129 | None:intergenic | 25.0% |
| ! | AAGGAAATTAAGCTTCATAA+AGG | + | chr5_1:53097168-53097187 | None:intergenic | 25.0% |
| ! | AAAGTTTGAATCATAAGTGA+GGG | + | chr5_1:53097344-53097363 | None:intergenic | 25.0% |
| ! | AAAAGTTTGAATCATAAGTG+AGG | + | chr5_1:53097345-53097364 | None:intergenic | 25.0% |
| ! | TGATATTCTTGGTTCATAAA+AGG | - | chr5_1:53097364-53097383 | Msa0736570:intron | 25.0% |
| !! | TTATCCCATTGATATTTTGT+TGG | - | chr5_1:53097519-53097538 | Msa0736570:intron | 25.0% |
| ! | ATGACCAACAAAATATCAAT+GGG | + | chr5_1:53097526-53097545 | None:intergenic | 25.0% |
| !! | TTATCCCATTGATATTTTGT+TGG | - | chr5_1:53097519-53097538 | Msa0736570:intron | 25.0% |
| ! | ATGACCAACAAAATATCAAT+GGG | + | chr5_1:53097526-53097545 | None:intergenic | 25.0% |
| ! | AATACTCGCGAAAAAAATAA+AGG | + | chr5_1:53097763-53097782 | None:intergenic | 25.0% |
| ! | CTTATACAAGTTAAATTACC+AGG | + | chr5_1:53097946-53097965 | None:intergenic | 25.0% |
| ! | AGAGAAGTTATGATTATGAT+AGG | - | chr5_1:53098504-53098523 | Msa0736570:intron | 25.0% |
| ! | GCTAAACTTAAAGATTTGTA+CGG | - | chr5_1:53098728-53098747 | Msa0736570:intron | 25.0% |
| ! | TTCTAATGTTGAATACCTTT+AGG | - | chr5_1:53099146-53099165 | Msa0736570:intron | 25.0% |
| !! | TTTAAAGCTAAAACTCCTAA+AGG | + | chr5_1:53099164-53099183 | None:intergenic | 25.0% |
| TAGAAGAAAAGAAAAACGCA+AGG | + | chr5_1:53092525-53092544 | None:intergenic | 30.0% | |
| TTGTATAAGTCAATCCAAAC+AGG | + | chr5_1:53093004-53093023 | None:intergenic | 30.0% | |
| CAGTCAAACAAAACTTATGT+CGG | + | chr5_1:53093036-53093055 | None:intergenic | 30.0% | |
| ! | ACATTTTTCATAAGTTCTCC+AGG | - | chr5_1:53093085-53093104 | Msa0736570:CDS | 30.0% |
| TACATATGGGACTTTACTTA+CGG | - | chr5_1:53093322-53093341 | Msa0736570:CDS | 30.0% | |
| GATAAGCACTTCACTTTAAA+TGG | - | chr5_1:53093351-53093370 | Msa0736570:CDS | 30.0% | |
| TGTGATTGAAATGAAACAGT+AGG | - | chr5_1:53093381-53093400 | Msa0736570:CDS | 30.0% | |
| !!! | TTTTGTCAAATGTTGACTCT+CGG | + | chr5_1:53093543-53093562 | None:intergenic | 30.0% |
| TGACAAAATTGTGTAACTGT+TGG | - | chr5_1:53093555-53093574 | Msa0736570:CDS | 30.0% | |
| ! | TACATTTTCTGACTCAATCA+TGG | - | chr5_1:53093592-53093611 | Msa0736570:CDS | 30.0% |
| ATGACAGAATATTCATGCAA+AGG | + | chr5_1:53093664-53093683 | None:intergenic | 30.0% | |
| !! | ATACAATCAAGTTGATCATG+TGG | - | chr5_1:53093742-53093761 | Msa0736570:intron | 30.0% |
| TTCCTAAACTCGATACAAAA+TGG | + | chr5_1:53093988-53094007 | None:intergenic | 30.0% | |
| TGCAAGATGGCTAATTATAA+AGG | + | chr5_1:53094029-53094048 | None:intergenic | 30.0% | |
| ATTATCAATCAAACTGTCTC+AGG | + | chr5_1:53094073-53094092 | None:intergenic | 30.0% | |
| ! | CTTATTTGAGCTTTATCTAC+TGG | - | chr5_1:53094139-53094158 | Msa0736570:intron | 30.0% |
| !! | ATAAGTTTTGTGAGACTGTT+TGG | - | chr5_1:53094163-53094182 | Msa0736570:intron | 30.0% |
| !! | TAAGTTTTGTGAGACTGTTT+GGG | - | chr5_1:53094164-53094183 | Msa0736570:intron | 30.0% |
| GCTTATGTATAAGTTTGCAT+AGG | + | chr5_1:53094333-53094352 | None:intergenic | 30.0% | |
| TTATACATAAGCGCTTATCA+TGG | - | chr5_1:53094341-53094360 | Msa0736570:intron | 30.0% | |
| AATAAGCTGTTTATCCAAAC+AGG | - | chr5_1:53093222-53093241 | Msa0736570:CDS | 30.0% | |
| ATAGTAGTAAGCAAAAACCA+TGG | + | chr5_1:53094527-53094546 | None:intergenic | 30.0% | |
| TCACATCTATAAGCATGAAT+TGG | - | chr5_1:53094555-53094574 | Msa0736570:intron | 30.0% | |
| CTTAGGTCTTAAGATTTCAA+GGG | + | chr5_1:53094666-53094685 | None:intergenic | 30.0% | |
| GGTCAAATGATTGACAAAAT+AGG | + | chr5_1:53094697-53094716 | None:intergenic | 30.0% | |
| ATTCAATCTGCATTTGTTTC+AGG | - | chr5_1:53094860-53094879 | Msa0736570:intron | 30.0% | |
| CTCTATTTGTGTACTATGTT+TGG | - | chr5_1:53094927-53094946 | Msa0736570:intron | 30.0% | |
| AAAACTAGAAGTAAAAGAGG+AGG | + | chr5_1:53095089-53095108 | None:intergenic | 30.0% | |
| !!! | CTTCTAGTTTTCATGAAGTT+AGG | - | chr5_1:53095098-53095117 | Msa0736570:intron | 30.0% |
| ! | TGATTCCTTATGTTGGTTAT+AGG | - | chr5_1:53095254-53095273 | Msa0736570:intron | 30.0% |
| !! | GTAAATGGGTCTTATTGTAA+GGG | + | chr5_1:53095475-53095494 | None:intergenic | 30.0% |
| !! | TGTAAATGGGTCTTATTGTA+AGG | + | chr5_1:53095476-53095495 | None:intergenic | 30.0% |
| AGACCCATTTACAAAATTCA+CGG | - | chr5_1:53095483-53095502 | Msa0736570:intron | 30.0% | |
| ! | TACCCGTGAATTTTGTAAAT+GGG | + | chr5_1:53095489-53095508 | None:intergenic | 30.0% |
| ! | ATACCCGTGAATTTTGTAAA+TGG | + | chr5_1:53095490-53095509 | None:intergenic | 30.0% |
| TGCAAGTGAAAGTTTGAAAA+TGG | - | chr5_1:53095646-53095665 | Msa0736570:intron | 30.0% | |
| ! | GAGAAGTAGGTCTTATAATT+AGG | - | chr5_1:53095695-53095714 | Msa0736570:intron | 30.0% |
| ! | TAAGAAAAAGTACGACATCA+AGG | + | chr5_1:53095865-53095884 | None:intergenic | 30.0% |
| ! | TTTTGTACCTTTGCTTGATA+TGG | - | chr5_1:53095913-53095932 | Msa0736570:intron | 30.0% |
| ! | TTGGTATTTATGTTTTGCTG+TGG | - | chr5_1:53095997-53096016 | Msa0736570:intron | 30.0% |
| GCATTTAAAAGTTCTCTCTT+AGG | - | chr5_1:53096099-53096118 | Msa0736570:intron | 30.0% | |
| !! | TTTTATGAAAGTGTGCTTTC+TGG | - | chr5_1:53096277-53096296 | Msa0736570:intron | 30.0% |
| ! | TTCCTCATCATCACATATTT+TGG | - | chr5_1:53096535-53096554 | Msa0736570:intron | 30.0% |
| !!! | TATTTTGGAGTAACAGTATG+AGG | - | chr5_1:53096550-53096569 | Msa0736570:intron | 30.0% |
| !!! | CTTATTTTAGTCCTGGTTAA+AGG | - | chr5_1:53096773-53096792 | Msa0736570:intron | 30.0% |
| GTTAAAGGGACACTAATATT+GGG | - | chr5_1:53096788-53096807 | Msa0736570:intron | 30.0% | |
| CGAATAGAGGTTAAATTTGA+CGG | - | chr5_1:53096854-53096873 | Msa0736570:intron | 30.0% | |
| TAAGCTTCATAAAGGATTAG+AGG | + | chr5_1:53097160-53097179 | None:intergenic | 30.0% | |
| !! | TTTCTTTCTCTAAGATCTCA+AGG | + | chr5_1:53097187-53097206 | None:intergenic | 30.0% |
| TGAGATCTTAGAGAAAGAAA+TGG | - | chr5_1:53097187-53097206 | Msa0736570:intron | 30.0% | |
| GAGATCTTAGAGAAAGAAAT+GGG | - | chr5_1:53097188-53097207 | Msa0736570:intron | 30.0% | |
| TGCAAAAACCTGATATACAA+AGG | + | chr5_1:53097247-53097266 | None:intergenic | 30.0% | |
| ! | ATTTCCCTTAACATTTTTCC+TGG | - | chr5_1:53097297-53097316 | Msa0736570:intron | 30.0% |
| ! | TTTCCCTTAACATTTTTCCT+GGG | - | chr5_1:53097298-53097317 | Msa0736570:intron | 30.0% |
| ATACCCAGGAAAAATGTTAA+GGG | + | chr5_1:53097304-53097323 | None:intergenic | 30.0% | |
| TATACCCAGGAAAAATGTTA+AGG | + | chr5_1:53097305-53097324 | None:intergenic | 30.0% | |
| ! | TTAACATTTTTCCTGGGTAT+AGG | - | chr5_1:53097304-53097323 | Msa0736570:intron | 30.0% |
| ! | TAACATTTTTCCTGGGTATA+GGG | - | chr5_1:53097305-53097324 | Msa0736570:intron | 30.0% |
| AAGTTTGAATCATAAGTGAG+GGG | + | chr5_1:53097343-53097362 | None:intergenic | 30.0% | |
| ATTCTTGGTTCATAAAAGGA+AGG | - | chr5_1:53097368-53097387 | Msa0736570:intron | 30.0% | |
| GATGACCAACAAAATATCAA+TGG | + | chr5_1:53097527-53097546 | None:intergenic | 30.0% | |
| ! | TTGATATTTTGTTGGTCATC+TGG | - | chr5_1:53097527-53097546 | Msa0736570:intron | 30.0% |
| CATGACCAACAAAATATCAA+TGG | + | chr5_1:53097628-53097647 | None:intergenic | 30.0% | |
| TCATGTATGAATTGAATTCG+TGG | - | chr5_1:53097643-53097662 | Msa0736570:intron | 30.0% | |
| !!! | CACTTTTTTACCCTAAGAAA+CGG | + | chr5_1:53097807-53097826 | None:intergenic | 30.0% |
| GTTTCTTAGGGTAAAAAAGT+GGG | - | chr5_1:53097806-53097825 | Msa0736570:CDS | 30.0% | |
| GAATGAAGGGTAAAAATATG+GGG | + | chr5_1:53097924-53097943 | None:intergenic | 30.0% | |
| GGAATGAAGGGTAAAAATAT+GGG | + | chr5_1:53097925-53097944 | None:intergenic | 30.0% | |
| AGGAATGAAGGGTAAAAATA+TGG | + | chr5_1:53097926-53097945 | None:intergenic | 30.0% | |
| !! | ATATTTTTACCCTTCATTCC+TGG | - | chr5_1:53097925-53097944 | Msa0736570:CDS | 30.0% |
| GTTAAATTACCAGGAATGAA+GGG | + | chr5_1:53097937-53097956 | None:intergenic | 30.0% | |
| AGTTAAATTACCAGGAATGA+AGG | + | chr5_1:53097938-53097957 | None:intergenic | 30.0% | |
| CATAATCATAACTTCTCTCT+CGG | + | chr5_1:53098502-53098521 | None:intergenic | 30.0% | |
| GAAGTTATGATTATGATAGG+AGG | - | chr5_1:53098507-53098526 | Msa0736570:intron | 30.0% | |
| AAAGATTTGTACGGTGATTT+AGG | - | chr5_1:53098737-53098756 | Msa0736570:intron | 30.0% | |
| ! | TTTTCAATGGAACAGTTATC+CGG | + | chr5_1:53098889-53098908 | None:intergenic | 30.0% |
| ! | TCCATTGAAAAAGAGCATAT+TGG | - | chr5_1:53098898-53098917 | Msa0736570:intron | 30.0% |
| !!! | TCCAATATGCTCTTTTTCAA+TGG | + | chr5_1:53098902-53098921 | None:intergenic | 30.0% |
| ACTTGGTTGACATAAGTTAT+AGG | - | chr5_1:53098950-53098969 | Msa0736570:intron | 30.0% | |
| ACATAGTTTCAACTGAACAA+TGG | + | chr5_1:53099106-53099125 | None:intergenic | 30.0% | |
| GTTTGGGTAATCGAAAAGAA+TGG | + | chr5_1:53092412-53092431 | None:intergenic | 35.0% | |
| !!! | AGTTTTTGATTCTGAGGCTT+AGG | + | chr5_1:53092434-53092453 | None:intergenic | 35.0% |
| TCAGAATCAAAAACTCGCTA+GGG | - | chr5_1:53092439-53092458 | Msa0736570:three_prime_UTR | 35.0% | |
| AACCAATCTCTTCGTGTAAT+TGG | - | chr5_1:53092478-53092497 | Msa0736570:three_prime_UTR | 35.0% | |
| TACCAATTACACGAAGAGAT+TGG | + | chr5_1:53092483-53092502 | None:intergenic | 35.0% | |
| GAAAAACGCAAGGAAGAAAT+TGG | + | chr5_1:53092515-53092534 | None:intergenic | 35.0% | |
| TTGGGGGATAATTGAGATTT+GGG | + | chr5_1:53092551-53092570 | None:intergenic | 35.0% | |
| ATTGGGGGATAATTGAGATT+TGG | + | chr5_1:53092552-53092571 | None:intergenic | 35.0% | |
| !! | CTGGTACAAGTTCTGAAATT+TGG | - | chr5_1:53092764-53092783 | Msa0736570:three_prime_UTR | 35.0% |
| AAAACTTATGTCGGTGGATA+AGG | + | chr5_1:53093027-53093046 | None:intergenic | 35.0% | |
| TCAAACAAAACTTATGTCGG+TGG | + | chr5_1:53093033-53093052 | None:intergenic | 35.0% | |
| ! | AGCCTTAGTGTTGGAAATTT+CGG | - | chr5_1:53093244-53093263 | Msa0736570:CDS | 35.0% |
| ATCCGAAATTTCCAACACTA+AGG | + | chr5_1:53093249-53093268 | None:intergenic | 35.0% | |
| ! | AGTGTTGGAAATTTCGGATT+CGG | - | chr5_1:53093250-53093269 | Msa0736570:CDS | 35.0% |
| TCATATGGTAAATGCTTGCA+GGG | + | chr5_1:53093300-53093319 | None:intergenic | 35.0% | |
| AGTCCCATATGTAACTCATA+TGG | + | chr5_1:53093315-53093334 | None:intergenic | 35.0% | |
| ACATATGGGACTTTACTTAC+GGG | - | chr5_1:53093323-53093342 | Msa0736570:CDS | 35.0% | |
| CTCTTATGTAAGGAGAATCA+GGG | + | chr5_1:53093877-53093896 | None:intergenic | 35.0% | |
| TGATTCTCCTTACATAAGAG+CGG | - | chr5_1:53093877-53093896 | Msa0736570:intron | 35.0% | |
| ! | CACCATTTTGTATCGAGTTT+AGG | - | chr5_1:53093983-53094002 | Msa0736570:intron | 35.0% |
| TTCAAGAAATAGAGCCTGTT+TGG | + | chr5_1:53094405-53094424 | None:intergenic | 35.0% | |
| TTGTTGAATCATCAAAGCCA+AGG | - | chr5_1:53094463-53094482 | Msa0736570:intron | 35.0% | |
| CATGAATTGGCGAGATTATA+GGG | - | chr5_1:53094568-53094587 | Msa0736570:intron | 35.0% | |
| ATGAATTGGCGAGATTATAG+GGG | - | chr5_1:53094569-53094588 | Msa0736570:intron | 35.0% | |
| CTCATGAAATTGGACCAAAA+TGG | + | chr5_1:53094606-53094625 | None:intergenic | 35.0% | |
| !! | CATTTTGGTCCAATTTCATG+AGG | - | chr5_1:53094604-53094623 | Msa0736570:intron | 35.0% |
| CCTTAGGTCTTAAGATTTCA+AGG | + | chr5_1:53094667-53094686 | None:intergenic | 35.0% | |
| CCTTGAAATCTTAAGACCTA+AGG | - | chr5_1:53094664-53094683 | Msa0736570:intron | 35.0% | |
| AATCTTAAGACCTAAGGTTC+TGG | - | chr5_1:53094670-53094689 | Msa0736570:intron | 35.0% | |
| !! | GGTTGATATTTTAGAGAGCT+TGG | - | chr5_1:53094804-53094823 | Msa0736570:intron | 35.0% |
| ATGCAGATTGAATAAGAAGC+AGG | + | chr5_1:53094853-53094872 | None:intergenic | 35.0% | |
| !! | CATTTGTTTCAGGTTGTTTG+TGG | - | chr5_1:53094870-53094889 | Msa0736570:intron | 35.0% |
| ! | CTATGTTTTATACCACAGGT+TGG | - | chr5_1:53095008-53095027 | Msa0736570:intron | 35.0% |
| AAGTCAAATTTACCAACCTG+TGG | + | chr5_1:53095023-53095042 | None:intergenic | 35.0% | |
| AGTGTTGTGAATTTAGGCTT+TGG | - | chr5_1:53095050-53095069 | Msa0736570:intron | 35.0% | |
| TTCATGAAGTTAGGAATGCT+TGG | - | chr5_1:53095107-53095126 | Msa0736570:intron | 35.0% | |
| ATGCAGCTCACAAGATAAAA+TGG | + | chr5_1:53095234-53095253 | None:intergenic | 35.0% | |
| ! | TCCTTATGTTGGTTATAGGT+TGG | - | chr5_1:53095258-53095277 | Msa0736570:intron | 35.0% |
| TCCAACCTATAACCAACATA+AGG | + | chr5_1:53095262-53095281 | None:intergenic | 35.0% | |
| ! | GTCTTATTGTAAGGGATGAA+GGG | + | chr5_1:53095467-53095486 | None:intergenic | 35.0% |
| GACCCATTTACAAAATTCAC+GGG | - | chr5_1:53095484-53095503 | Msa0736570:intron | 35.0% | |
| ! | GTAGGTCTTATAATTAGGGA+TGG | - | chr5_1:53095700-53095719 | Msa0736570:intron | 35.0% |
| GTCTTATAATTAGGGATGGA+TGG | - | chr5_1:53095704-53095723 | Msa0736570:intron | 35.0% | |
| !! | ATGTTTTGCTGTGGCTTATA+TGG | - | chr5_1:53096006-53096025 | Msa0736570:intron | 35.0% |
| ! | AACTGATGATGCTTTCTTTC+AGG | - | chr5_1:53096173-53096192 | Msa0736570:intron | 35.0% |
| ! | TTCTTTCAGGAATTTTCTCC+TGG | - | chr5_1:53096186-53096205 | Msa0736570:intron | 35.0% |
| ! | GAATTTTCTCCTGGATCTAA+TGG | - | chr5_1:53096195-53096214 | Msa0736570:intron | 35.0% |
| ACATAATGACTTATAAGGCC+AGG | - | chr5_1:53096405-53096424 | Msa0736570:intron | 35.0% | |
| CATAATGACTTATAAGGCCA+GGG | - | chr5_1:53096406-53096425 | Msa0736570:intron | 35.0% | |
| ! | CTCCAAAATATGTGATGATG+AGG | + | chr5_1:53096540-53096559 | None:intergenic | 35.0% |
| AAAATGATGCCGTGGTAAAA+AGG | + | chr5_1:53096671-53096690 | None:intergenic | 35.0% | |
| AAAACAAGAAAATGATGCCG+TGG | + | chr5_1:53096679-53096698 | None:intergenic | 35.0% | |
| TTTCTAAACTCACTACACCT+AGG | - | chr5_1:53096700-53096719 | Msa0736570:intron | 35.0% | |
| ATATTAGTGTCCCTTTAACC+AGG | + | chr5_1:53096787-53096806 | None:intergenic | 35.0% | |
| GGTTAAAGGGACACTAATAT+TGG | - | chr5_1:53096787-53096806 | Msa0736570:intron | 35.0% | |
| CAATTTGATTACTCAAGTGC+AGG | + | chr5_1:53096816-53096835 | None:intergenic | 35.0% | |
| AATTTGACGGAAACACCAAA+AGG | - | chr5_1:53096867-53096886 | Msa0736570:intron | 35.0% | |
| !!! | TAGGCAGTGCATATTTTAGT+TGG | - | chr5_1:53096986-53097005 | Msa0736570:intron | 35.0% |
| ! | TTTAGTTGGCGGATCAAAAT+AGG | - | chr5_1:53097000-53097019 | Msa0736570:intron | 35.0% |
| GAATGGATGATACACAAGAT+GGG | + | chr5_1:53097031-53097050 | None:intergenic | 35.0% | |
| TTTATCTCCTCTTCTTTCTG+AGG | - | chr5_1:53097068-53097087 | Msa0736570:intron | 35.0% | |
| ! | TTGTTTCCCCTGCAAATTTT+AGG | - | chr5_1:53097132-53097151 | Msa0736570:intron | 35.0% |
| ! | TGTTTCCCCTGCAAATTTTA+GGG | - | chr5_1:53097133-53097152 | Msa0736570:intron | 35.0% |
| GTAAAACGCCTTTGTATATC+AGG | - | chr5_1:53097236-53097255 | Msa0736570:intron | 35.0% | |
| ! | AACATTTTTCCTGGGTATAG+GGG | - | chr5_1:53097306-53097325 | Msa0736570:intron | 35.0% |
| TCATATGCAAGAAGAGATTC+TGG | - | chr5_1:53097426-53097445 | Msa0736570:intron | 35.0% | |
| ! | ACTTGTGCTGACAACATAAA+AGG | + | chr5_1:53097719-53097738 | None:intergenic | 35.0% |
| CGTTTCTTAGGGTAAAAAAG+TGG | - | chr5_1:53097805-53097824 | Msa0736570:CDS | 35.0% | |
| AAGTGGGTAATTATCTCTTC+TGG | - | chr5_1:53097822-53097841 | Msa0736570:CDS | 35.0% | |
| !!! | TCAGTGCCATTTTTTTCATG+AGG | + | chr5_1:53098248-53098267 | None:intergenic | 35.0% |
| TATCCCTTTCAGGATATTCA+CGG | + | chr5_1:53098310-53098329 | None:intergenic | 35.0% | |
| TGAATATCCTGAAAGGGATA+GGG | - | chr5_1:53098310-53098329 | Msa0736570:intron | 35.0% | |
| ACAGATATTATGACCGAGAT+AGG | - | chr5_1:53098393-53098412 | Msa0736570:intron | 35.0% | |
| TCTAGGAATTCTTTCCATGT+TGG | + | chr5_1:53098780-53098799 | None:intergenic | 35.0% | |
| ACATGGAAAGAATTCCTAGA+AGG | - | chr5_1:53098780-53098799 | Msa0736570:intron | 35.0% | |
| CATGGAAAGAATTCCTAGAA+GGG | - | chr5_1:53098781-53098800 | Msa0736570:intron | 35.0% | |
| ATTCCTAGAAGGGATAATAG+TGG | - | chr5_1:53098791-53098810 | Msa0736570:intron | 35.0% | |
| GATAATGAAAGGCAATGCAA+AGG | + | chr5_1:53098930-53098949 | None:intergenic | 35.0% | |
| CATTGCCTTTCATTATCACT+TGG | - | chr5_1:53098933-53098952 | Msa0736570:intron | 35.0% | |
| ! | GTCAACCAAGTGATAATGAA+AGG | + | chr5_1:53098941-53098960 | None:intergenic | 35.0% |
| ! | AGTCTAAAACTTGCAAAGCA+GGG | + | chr5_1:53099046-53099065 | None:intergenic | 35.0% |
| ! | AAGTCTAAAACTTGCAAAGC+AGG | + | chr5_1:53099047-53099066 | None:intergenic | 35.0% |
| ! | ACGACATCAGATTATTGACT+TGG | + | chr5_1:53099187-53099206 | None:intergenic | 35.0% |
| !! | TGATTCTGAGGCTTAGGTTT+GGG | + | chr5_1:53092428-53092447 | None:intergenic | 40.0% |
| !! | TTGATTCTGAGGCTTAGGTT+TGG | + | chr5_1:53092429-53092448 | None:intergenic | 40.0% |
| !! | CTAGCGAGTTTTTGATTCTG+AGG | + | chr5_1:53092440-53092459 | None:intergenic | 40.0% |
| CTCAGAATCAAAAACTCGCT+AGG | - | chr5_1:53092438-53092457 | Msa0736570:three_prime_UTR | 40.0% | |
| TAGTAGAAAGAAGGGGACAA+GGG | + | chr5_1:53092652-53092671 | None:intergenic | 40.0% | |
| ATAGTAGAAAGAAGGGGACA+AGG | + | chr5_1:53092653-53092672 | None:intergenic | 40.0% | |
| ! | TGTGTGTGAATTTTGCAGCT+AGG | + | chr5_1:53092967-53092986 | None:intergenic | 40.0% |
| CTTATGCATAAGTGCCTGTT+TGG | - | chr5_1:53092987-53093006 | Msa0736570:CDS | 40.0% | |
| !! | GCTGTTTTCATAAGCTATCC+TGG | + | chr5_1:53093106-53093125 | None:intergenic | 40.0% |
| ACATTTGATATGTTCGGGCA+CGG | + | chr5_1:53093277-53093296 | None:intergenic | 40.0% | |
| CAGGGACATTTGATATGTTC+GGG | + | chr5_1:53093282-53093301 | None:intergenic | 40.0% | |
| GCAGGGACATTTGATATGTT+CGG | + | chr5_1:53093283-53093302 | None:intergenic | 40.0% | |
| CTCATATGGTAAATGCTTGC+AGG | + | chr5_1:53093301-53093320 | None:intergenic | 40.0% | |
| ATCATGGAGATACAGACTTC+TGG | - | chr5_1:53093608-53093627 | Msa0736570:CDS | 40.0% | |
| TTCTCTAGCAAGGACTCAAT+TGG | + | chr5_1:53093638-53093657 | None:intergenic | 40.0% | |
| ! | AAGTTGATCATGTGGAACCA+TGG | - | chr5_1:53093750-53093769 | Msa0736570:intron | 40.0% |
| AGAAGACAGAAAGCAGTTGA+AGG | + | chr5_1:53093797-53093816 | None:intergenic | 40.0% | |
| GCTCTTATGTAAGGAGAATC+AGG | + | chr5_1:53093878-53093897 | None:intergenic | 40.0% | |
| CTACATACCGCTCTTATGTA+AGG | + | chr5_1:53093887-53093906 | None:intergenic | 40.0% | |
| TACATAAGAGCGGTATGTAG+AGG | - | chr5_1:53093887-53093906 | Msa0736570:intron | 40.0% | |
| GCATGAATTGGCGAGATTAT+AGG | - | chr5_1:53094567-53094586 | Msa0736570:intron | 40.0% | |
| ACAACTTGGCCTCATGAAAT+TGG | + | chr5_1:53094616-53094635 | None:intergenic | 40.0% | |
| CAAAATAGGTCCAGAACCTT+AGG | + | chr5_1:53094683-53094702 | None:intergenic | 40.0% | |
| CTGATATCAGATGTGGTTTG+TGG | - | chr5_1:53094783-53094802 | Msa0736570:intron | 40.0% | |
| !! | ATTTTAGAGAGCTTGGCTGT+TGG | - | chr5_1:53094811-53094830 | Msa0736570:intron | 40.0% |
| TTGAATAAGAAGCAGGACGT+GGG | + | chr5_1:53094846-53094865 | None:intergenic | 40.0% | |
| ATTGAATAAGAAGCAGGACG+TGG | + | chr5_1:53094847-53094866 | None:intergenic | 40.0% | |
| ! | GTTGCGAGTGTTGTGAATTT+AGG | - | chr5_1:53095044-53095063 | Msa0736570:intron | 40.0% |
| !! | GCTGCATTGATTCCTTATGT+TGG | - | chr5_1:53095247-53095266 | Msa0736570:intron | 40.0% |
| ACCTCATCATCCTTTGCATA+TGG | + | chr5_1:53095339-53095358 | None:intergenic | 40.0% | |
| !! | GGTCTTATTGTAAGGGATGA+AGG | + | chr5_1:53095468-53095487 | None:intergenic | 40.0% |
| ! | TCTATGAGGGGTTTTCGTTA+TGG | - | chr5_1:53095831-53095850 | Msa0736570:intron | 40.0% |
| CATAGCTCCATATCAAGCAA+AGG | + | chr5_1:53095923-53095942 | None:intergenic | 40.0% | |
| TTTCTCCTGGATCTAATGGA+CGG | - | chr5_1:53096199-53096218 | Msa0736570:intron | 40.0% | |
| !! | TATATCCGTGATTTGCTCCT+TGG | - | chr5_1:53096240-53096259 | Msa0736570:intron | 40.0% |
| AAAGATAACGAACCTGTCCA+AGG | + | chr5_1:53096260-53096279 | None:intergenic | 40.0% | |
| AGGGAGGAAATTAGTAACGT+AGG | - | chr5_1:53096967-53096986 | Msa0736570:intron | 40.0% | |
| !!! | GCAGTGCATATTTTAGTTGG+CGG | - | chr5_1:53096989-53097008 | Msa0736570:intron | 40.0% |
| GGAATGGATGATACACAAGA+TGG | + | chr5_1:53097032-53097051 | None:intergenic | 40.0% | |
| AGAGGACCCTAAAATTTGCA+GGG | + | chr5_1:53097142-53097161 | None:intergenic | 40.0% | |
| TAGAGGACCCTAAAATTTGC+AGG | + | chr5_1:53097143-53097162 | None:intergenic | 40.0% | |
| TGGGTAATTATCTCTTCTGG+CGG | - | chr5_1:53097825-53097844 | Msa0736570:CDS | 40.0% | |
| GGTAAAAATATGGGGCAACA+GGG | + | chr5_1:53097916-53097935 | None:intergenic | 40.0% | |
| AAACTCCCTACTACACATTG+TGG | - | chr5_1:53098071-53098090 | Msa0736570:exon | 40.0% | |
| TCGTACCACAATGTGTAGTA+GGG | + | chr5_1:53098079-53098098 | None:intergenic | 40.0% | |
| CTGACCAAAAGAGACTGAAA+GGG | + | chr5_1:53098165-53098184 | None:intergenic | 40.0% | |
| !!! | CCATTTTTTTCATGAGGAGC+AGG | + | chr5_1:53098242-53098261 | None:intergenic | 40.0% |
| CCTGCTCCTCATGAAAAAAA+TGG | - | chr5_1:53098239-53098258 | Msa0736570:intron | 40.0% | |
| GTGAATATCCTGAAAGGGAT+AGG | - | chr5_1:53098309-53098328 | Msa0736570:intron | 40.0% | |
| TTATGACCGAGATAGGAACA+AGG | - | chr5_1:53098400-53098419 | Msa0736570:intron | 40.0% | |
| ATGCTGAAAGATACAGGGAT+CGG | - | chr5_1:53098429-53098448 | Msa0736570:intron | 40.0% | |
| CAATGCTGTTGTCATAATCC+CGG | + | chr5_1:53098559-53098578 | None:intergenic | 40.0% | |
| !! | TATGACAACAGCATTGGCAA+TGG | - | chr5_1:53098563-53098582 | Msa0736570:intron | 40.0% |
| TTCTTACTTCCATCTCTCTG+TGG | + | chr5_1:53098686-53098705 | None:intergenic | 40.0% | |
| GGTGATTTAGGTGAAAGCAA+AGG | - | chr5_1:53098749-53098768 | Msa0736570:intron | 40.0% | |
| TCACCACTATTATCCCTTCT+AGG | + | chr5_1:53098797-53098816 | None:intergenic | 40.0% | |
| AAGGGATAATAGTGGTGAAG+AGG | - | chr5_1:53098799-53098818 | Msa0736570:intron | 40.0% | |
| GGTGAAGAGGTTATTAGACT+TGG | - | chr5_1:53098812-53098831 | Msa0736570:intron | 40.0% | |
| GAAGAGGTTATTAGACTTGG+TGG | - | chr5_1:53098815-53098834 | Msa0736570:intron | 40.0% | |
| AGAATGCTTGTATCTGATGC+CGG | - | chr5_1:53098867-53098886 | Msa0736570:intron | 40.0% | |
| TCAACTGAACAATGGAAGCA+TGG | + | chr5_1:53099098-53099117 | None:intergenic | 40.0% | |
| GCTGTCTAGATGCAAATTGA+TGG | - | chr5_1:53099235-53099254 | Msa0736570:five_prime_UTR | 40.0% | |
| TCCAAACAGAGCCTTAGTGT+TGG | - | chr5_1:53093235-53093254 | Msa0736570:CDS | 45.0% | |
| TCCAACACTAAGGCTCTGTT+TGG | + | chr5_1:53093239-53093258 | None:intergenic | 45.0% | |
| !! | TGTCAAATGTTGACTCTCGG+CGG | + | chr5_1:53093540-53093559 | None:intergenic | 45.0% |
| TGTGTAACTGTTGGAGTGAG+AGG | - | chr5_1:53093564-53093583 | Msa0736570:CDS | 45.0% | |
| GTGTAACTGTTGGAGTGAGA+GGG | - | chr5_1:53093565-53093584 | Msa0736570:CDS | 45.0% | |
| TGTAACTGTTGGAGTGAGAG+GGG | - | chr5_1:53093566-53093585 | Msa0736570:CDS | 45.0% | |
| GCAAAGGACTTTCTCTAGCA+AGG | + | chr5_1:53093648-53093667 | None:intergenic | 45.0% | |
| TCATGTGGAACCATGGATGA+CGG | - | chr5_1:53093757-53093776 | Msa0736570:intron | 45.0% | |
| TCACTGTCAAGCAGATGCAT+GGG | - | chr5_1:53093840-53093859 | Msa0736570:intron | 45.0% | |
| ! | AGTTTGGCTTAGTGCGTTAG+TGG | - | chr5_1:53094437-53094456 | Msa0736570:intron | 45.0% |
| CAGACGAAATCAGGGATAGA+TGG | - | chr5_1:53094486-53094505 | Msa0736570:intron | 45.0% | |
| CGAAATCAGGGATAGATGGT+AGG | - | chr5_1:53094490-53094509 | Msa0736570:intron | 45.0% | |
| GGTAGGATTGAACACTTCCA+TGG | - | chr5_1:53094507-53094526 | Msa0736570:intron | 45.0% | |
| CGAGATTATAGGGGATCACT+TGG | - | chr5_1:53094578-53094597 | Msa0736570:intron | 45.0% | |
| ! | GGGATCACTTGGATCCATTT+TGG | - | chr5_1:53094589-53094608 | Msa0736570:intron | 45.0% |
| ACATCTGATATCAGCCACAC+GGG | + | chr5_1:53094777-53094796 | None:intergenic | 45.0% | |
| CACATCTGATATCAGCCACA+CGG | + | chr5_1:53094778-53094797 | None:intergenic | 45.0% | |
| GTGGTGCTCAACTGAATTCT+TGG | - | chr5_1:53094889-53094908 | Msa0736570:intron | 45.0% | |
| ATGCTGATCCAAAGACTCTG+TGG | - | chr5_1:53095301-53095320 | Msa0736570:intron | 45.0% | |
| ! | CTGGTTTGAGCCATATGCAA+AGG | - | chr5_1:53095326-53095345 | Msa0736570:intron | 45.0% |
| GCCATATGCAAAGGATGATG+AGG | - | chr5_1:53095335-53095354 | Msa0736570:intron | 45.0% | |
| ! | TAATGGACGGATGACTACGA+TGG | - | chr5_1:53096212-53096231 | Msa0736570:intron | 45.0% |
| AATGGACGGATGACTACGAT+GGG | - | chr5_1:53096213-53096232 | Msa0736570:intron | 45.0% | |
| TTGCATTCTTGTGATGCACC+TGG | + | chr5_1:53096504-53096523 | None:intergenic | 45.0% | |
| !! | CAGTTTTCTTCTGGGAACCT+AGG | + | chr5_1:53096720-53096739 | None:intergenic | 45.0% |
| !! | TTTTGGGAGACTGCGAATAG+AGG | - | chr5_1:53096841-53096860 | Msa0736570:intron | 45.0% |
| AGCTCAACCTCAGAAAGAAG+AGG | + | chr5_1:53097078-53097097 | None:intergenic | 45.0% | |
| GAGGACCCTAAAATTTGCAG+GGG | + | chr5_1:53097141-53097160 | None:intergenic | 45.0% | |
| ATCAACGCTCACCGTTTCTT+AGG | - | chr5_1:53097793-53097812 | Msa0736570:CDS | 45.0% | |
| TCAACGCTCACCGTTTCTTA+GGG | - | chr5_1:53097794-53097813 | Msa0736570:CDS | 45.0% | |
| GGGTAAAAATATGGGGCAAC+AGG | + | chr5_1:53097917-53097936 | None:intergenic | 45.0% | |
| GTCGTACCACAATGTGTAGT+AGG | + | chr5_1:53098080-53098099 | None:intergenic | 45.0% | |
| ACTACACATTGTGGTACGAC+AGG | - | chr5_1:53098080-53098099 | Msa0736570:five_prime_UTR | 45.0% | |
| CTACACATTGTGGTACGACA+GGG | - | chr5_1:53098081-53098100 | Msa0736570:five_prime_UTR | 45.0% | |
| TACACATTGTGGTACGACAG+GGG | - | chr5_1:53098082-53098101 | Msa0736570:five_prime_UTR | 45.0% | |
| TTTCACAGAAGGTGGTCTAC+GGG | + | chr5_1:53098138-53098157 | None:intergenic | 45.0% | |
| CTTTCACAGAAGGTGGTCTA+CGG | + | chr5_1:53098139-53098158 | None:intergenic | 45.0% | |
| GCTGACCAAAAGAGACTGAA+AGG | + | chr5_1:53098166-53098185 | None:intergenic | 45.0% | |
| TTCTTCACCCATTCGTCGTA+CGG | - | chr5_1:53098214-53098233 | Msa0736570:intron | 45.0% | |
| AGAGCCGTGAATATCCTGAA+AGG | - | chr5_1:53098303-53098322 | Msa0736570:intron | 45.0% | |
| GAGCCGTGAATATCCTGAAA+GGG | - | chr5_1:53098304-53098323 | Msa0736570:intron | 45.0% | |
| AAAGGGATAGGGAACGTGAT+AGG | - | chr5_1:53098369-53098388 | Msa0736570:intron | 45.0% | |
| AAGGGATAGGGAACGTGATA+GGG | - | chr5_1:53098370-53098389 | Msa0736570:intron | 45.0% | |
| ACCGAGATGCTGAAAGATAC+AGG | - | chr5_1:53098423-53098442 | Msa0736570:intron | 45.0% | |
| CCCTGTATCTTTCAGCATCT+CGG | + | chr5_1:53098427-53098446 | None:intergenic | 45.0% | |
| CCGAGATGCTGAAAGATACA+GGG | - | chr5_1:53098424-53098443 | Msa0736570:intron | 45.0% | |
| TGCTGAAAGATACAGGGATC+GGG | - | chr5_1:53098430-53098449 | Msa0736570:intron | 45.0% | |
| CGGGATTATGACAACAGCAT+TGG | - | chr5_1:53098557-53098576 | Msa0736570:intron | 45.0% | |
| !! | ACAGCATTGGCAATGGTAGT+AGG | - | chr5_1:53098570-53098589 | Msa0736570:intron | 45.0% |
| AAGCAAAGGAGATGCCAACA+TGG | - | chr5_1:53098763-53098782 | Msa0736570:intron | 45.0% | |
| !! | TTAGACTTGGTGGCTCTTCT+TGG | - | chr5_1:53098825-53098844 | Msa0736570:intron | 45.0% |
| TGGAGATACAGACTTCTGGC+AGG | - | chr5_1:53093612-53093631 | Msa0736570:CDS | 50.0% | |
| CATGTGGAACCATGGATGAC+GGG | - | chr5_1:53093758-53093777 | Msa0736570:intron | 50.0% | |
| ATGTGGAACCATGGATGACG+GGG | - | chr5_1:53093759-53093778 | Msa0736570:intron | 50.0% | |
| CTGCTTGACAGTGAGCTTCA+TGG | + | chr5_1:53093834-53093853 | None:intergenic | 50.0% | |
| CTCACTGTCAAGCAGATGCA+TGG | - | chr5_1:53093839-53093858 | Msa0736570:intron | 50.0% | |
| AAGCCAAGGCAGACGAAATC+AGG | - | chr5_1:53094477-53094496 | Msa0736570:intron | 50.0% | |
| AGCCAAGGCAGACGAAATCA+GGG | - | chr5_1:53094478-53094497 | Msa0736570:intron | 50.0% | |
| ATCCCTGATTTCGTCTGCCT+TGG | + | chr5_1:53094483-53094502 | None:intergenic | 50.0% | |
| GGCGTACAGATTACAAGGGA+AGG | + | chr5_1:53094718-53094737 | None:intergenic | 50.0% | |
| CACGGGCGTACAGATTACAA+GGG | + | chr5_1:53094722-53094741 | None:intergenic | 50.0% | |
| GGCGTACAGATTACAAGGGA+AGG | + | chr5_1:53094718-53094737 | None:intergenic | 50.0% | |
| CACGGGCGTACAGATTACAA+GGG | + | chr5_1:53094722-53094741 | None:intergenic | 50.0% | |
| ACACGGGCGTACAGATTACA+AGG | + | chr5_1:53094761-53094780 | None:intergenic | 50.0% | |
| TTGTAATCTGTACGCCCGTG+TGG | - | chr5_1:53094722-53094741 | Msa0736570:intron | 50.0% | |
| CGTGTGGCTGATATCAGATG+TGG | - | chr5_1:53094776-53094795 | Msa0736570:intron | 50.0% | |
| ATAAGAAGCAGGACGTGGGA+AGG | + | chr5_1:53094842-53094861 | None:intergenic | 50.0% | |
| ATCCAAAGACTCTGTGGAGC+TGG | - | chr5_1:53095307-53095326 | Msa0736570:intron | 50.0% | |
| AACCAGCTCCACAGAGTCTT+TGG | + | chr5_1:53095312-53095331 | None:intergenic | 50.0% | |
| GTCATCCGTCCATTAGATCC+AGG | + | chr5_1:53096207-53096226 | None:intergenic | 50.0% | |
| CCTGTCCAAGGAGCAAATCA+CGG | + | chr5_1:53096248-53096267 | None:intergenic | 50.0% | |
| GAGCTCTACTACCAGAATCC+AGG | - | chr5_1:53096483-53096502 | Msa0736570:intron | 50.0% | |
| CTTGTGATGCACCTGGATTC+TGG | + | chr5_1:53096497-53096516 | None:intergenic | 50.0% | |
| ATCCTGTAATGCCCACCTGT+CGG | - | chr5_1:53097212-53097231 | Msa0736570:intron | 50.0% | |
| !!! | CAAAGGCGTTTTACACCGAC+AGG | + | chr5_1:53097230-53097249 | None:intergenic | 50.0% |
| ATTACAGGAACTGGGATGCG+AGG | + | chr5_1:53098020-53098039 | None:intergenic | 50.0% | |
| CCTGACGCATTACAGGAACT+GGG | + | chr5_1:53098028-53098047 | None:intergenic | 50.0% | |
| ACCTGACGCATTACAGGAAC+TGG | + | chr5_1:53098029-53098048 | None:intergenic | 50.0% | |
| ! | TCCTGTAATGCGTCAGGTTG+TGG | - | chr5_1:53098031-53098050 | Msa0736570:CDS | 50.0% |
| AGTGTCATCAGAACCGTGAC+GGG | + | chr5_1:53098114-53098133 | None:intergenic | 50.0% | |
| CAGTGTCATCAGAACCGTGA+CGG | + | chr5_1:53098115-53098134 | None:intergenic | 50.0% | |
| GAAAGGGCAGCTTTCACAGA+AGG | + | chr5_1:53098149-53098168 | None:intergenic | 50.0% | |
| ! | GCTGCCCTTTCAGTCTCTTT+TGG | - | chr5_1:53098158-53098177 | Msa0736570:five_prime_UTR | 50.0% |
| GGGTGAAGAATCCCTTGTAG+AGG | + | chr5_1:53098204-53098223 | None:intergenic | 50.0% | |
| CTCTGACTGCGATGATTGCT+GGG | + | chr5_1:53098287-53098306 | None:intergenic | 50.0% | |
| ATCCTGAAAGGGATAGGGAC+AGG | - | chr5_1:53098315-53098334 | Msa0736570:intron | 50.0% | |
| TCCTGAAAGGGATAGGGACA+GGG | - | chr5_1:53098316-53098335 | Msa0736570:intron | 50.0% | |
| CACGTTCCCTATCCCTTTCT+CGG | + | chr5_1:53098367-53098386 | None:intergenic | 50.0% | |
| CTCGGTCCTTGTTCCTATCT+CGG | + | chr5_1:53098409-53098428 | None:intergenic | 50.0% | |
| AAAGATACAGGGATCGGGAC+CGG | - | chr5_1:53098435-53098454 | Msa0736570:intron | 50.0% | |
| ACTATGAGAGGGACAGATCC+AGG | - | chr5_1:53098465-53098484 | Msa0736570:intron | 50.0% | |
| ACGCAGAGAGAGAAAGTAGC+CGG | - | chr5_1:53098537-53098556 | Msa0736570:intron | 50.0% | |
| GTAGGAGTCGGAGTAGAAGT+AGG | - | chr5_1:53098603-53098622 | Msa0736570:intron | 50.0% | |
| !! | TGCCAACTTGGCTCTGACTT+CGG | + | chr5_1:53098637-53098656 | None:intergenic | 50.0% |
| CCACGGGCGTACAGATTACA+AGG | + | chr5_1:53094723-53094742 | None:intergenic | 55.0% | |
| CCTTGTAATCTGTACGCCCG+TGG | - | chr5_1:53094720-53094739 | Msa0736570:intron | 55.0% | |
| !! | CCGTGATTTGCTCCTTGGAC+AGG | - | chr5_1:53096245-53096264 | Msa0736570:intron | 55.0% |
| ! | GGCGTTTTACACCGACAGGT+GGG | + | chr5_1:53097226-53097245 | None:intergenic | 55.0% |
| ! | AGGCGTTTTACACCGACAGG+TGG | + | chr5_1:53097227-53097246 | None:intergenic | 55.0% |
| CCCAGTTCCTGTAATGCGTC+AGG | - | chr5_1:53098025-53098044 | Msa0736570:CDS | 55.0% | |
| GCCACAACCTGACGCATTAC+AGG | + | chr5_1:53098035-53098054 | None:intergenic | 55.0% | |
| ! | GCGTCAGGTTGTGGCAAATC+TGG | - | chr5_1:53098040-53098059 | Msa0736570:CDS | 55.0% |
| AGGGCAGCTTTCACAGAAGG+TGG | + | chr5_1:53098146-53098165 | None:intergenic | 55.0% | |
| GCCACATCGAGCCTCTACAA+GGG | - | chr5_1:53098190-53098209 | Msa0736570:intron | 55.0% | |
| TCCCTTGTAGAGGCTCGATG+TGG | + | chr5_1:53098194-53098213 | None:intergenic | 55.0% | |
| ! | GCAGGTACCGTACGACGAAT+GGG | + | chr5_1:53098224-53098243 | None:intergenic | 55.0% |
| ! | AGCAGGTACCGTACGACGAA+TGG | + | chr5_1:53098225-53098244 | None:intergenic | 55.0% |
| GCTCTGACTGCGATGATTGC+TGG | + | chr5_1:53098288-53098307 | None:intergenic | 55.0% | |
| TCCCTGTCCCTATCCCTTTC+AGG | + | chr5_1:53098320-53098339 | None:intergenic | 55.0% | |
| AAAGGGATAGGGACAGGGAG+CGG | - | chr5_1:53098321-53098340 | Msa0736570:intron | 55.0% | |
| ACAGGGACCGAGAAAGGGAT+AGG | - | chr5_1:53098357-53098376 | Msa0736570:intron | 55.0% | |
| CAGGGACCGAGAAAGGGATA+GGG | - | chr5_1:53098358-53098377 | Msa0736570:intron | 55.0% | |
| AAGATACAGGGATCGGGACC+GGG | - | chr5_1:53098436-53098455 | Msa0736570:intron | 55.0% | |
| ACCGGGATAGGGACTATGAG+AGG | - | chr5_1:53098453-53098472 | Msa0736570:intron | 55.0% | |
| CCCTCTCATAGTCCCTATCC+CGG | + | chr5_1:53098457-53098476 | None:intergenic | 55.0% | |
| CCGGGATAGGGACTATGAGA+GGG | - | chr5_1:53098454-53098473 | Msa0736570:intron | 55.0% | |
| ATGAGAGGGACAGATCCAGG+AGG | - | chr5_1:53098468-53098487 | Msa0736570:intron | 55.0% | |
| TGAGAGGGACAGATCCAGGA+GGG | - | chr5_1:53098469-53098488 | Msa0736570:intron | 55.0% | |
| GGACAGATCCAGGAGGGATA+GGG | - | chr5_1:53098475-53098494 | Msa0736570:intron | 55.0% | |
| CGCAGAGAGAGAAAGTAGCC+GGG | - | chr5_1:53098538-53098557 | Msa0736570:intron | 55.0% | |
| TACTCCGACTCCTACTGCGA+TGG | + | chr5_1:53098598-53098617 | None:intergenic | 55.0% | |
| GTCGGAGTAGAAGTAGGAGC+AGG | - | chr5_1:53098609-53098628 | Msa0736570:intron | 55.0% | |
| AGCCGAAGTCAGAGCCAAGT+TGG | - | chr5_1:53098632-53098651 | Msa0736570:intron | 55.0% | |
| !! | GTGGACTAGAGCGTGAGTCA+TGG | + | chr5_1:53098667-53098686 | None:intergenic | 55.0% |
| CGCTCTAGTCCACAGAGAGA+TGG | - | chr5_1:53098674-53098693 | Msa0736570:intron | 55.0% | |
| CGACAGTTCCCCGTCATCCA+TGG | + | chr5_1:53093770-53093789 | None:intergenic | 60.0% | |
| !! | TGGATGACGGGGAACTGTCG+TGG | - | chr5_1:53093770-53093789 | Msa0736570:intron | 60.0% |
| GGAAGGTCGATAGCAGCCAC+GGG | + | chr5_1:53094739-53094758 | None:intergenic | 60.0% | |
| GGGAAGGTCGATAGCAGCCA+CGG | + | chr5_1:53094740-53094759 | None:intergenic | 60.0% | |
| CACCGACAGGTGGGCATTAC+AGG | + | chr5_1:53097217-53097236 | None:intergenic | 60.0% | |
| CCAGCAACTCCCCTATACCC+AGG | + | chr5_1:53097318-53097337 | None:intergenic | 60.0% | |
| CCTGGGTATAGGGGAGTTGC+TGG | - | chr5_1:53097315-53097334 | Msa0736570:intron | 60.0% | |
| ACAGGGGAAACCACCCGTCA+CGG | - | chr5_1:53098098-53098117 | Msa0736570:five_prime_UTR | 60.0% | |
| ! | GTCATCAGAACCGTGACGGG+TGG | + | chr5_1:53098111-53098130 | None:intergenic | 60.0% |
| CGCCACATCGAGCCTCTACA+AGG | - | chr5_1:53098189-53098208 | Msa0736570:intron | 60.0% | |
| CAGGGACAGGGACCGAGAAA+GGG | - | chr5_1:53098352-53098371 | Msa0736570:intron | 60.0% | |
| GGGACAGATCCAGGAGGGAT+AGG | - | chr5_1:53098474-53098493 | Msa0736570:intron | 60.0% | |
| GTAGTAGGCGCCATCGCAGT+AGG | - | chr5_1:53098585-53098604 | Msa0736570:intron | 60.0% | |
| AGAGCGTGAGTCATGGCGTG+CGG | + | chr5_1:53098660-53098679 | None:intergenic | 60.0% | |
| CCTTTCTCGGTCCCTGTCCC+TGG | + | chr5_1:53098354-53098373 | None:intergenic | 65.0% | |
| CCAGGGACAGGGACCGAGAA+AGG | - | chr5_1:53098351-53098370 | Msa0736570:intron | 65.0% | |
| ACAGGGATCGGGACCGGGAT+AGG | - | chr5_1:53098441-53098460 | Msa0736570:intron | 65.0% | |
| CAGGGATCGGGACCGGGATA+GGG | - | chr5_1:53098442-53098461 | Msa0736570:intron | 65.0% | |
| CTCTCGGTCCCTATCCCTCC+TGG | + | chr5_1:53098486-53098505 | None:intergenic | 65.0% | |
| GGCGCCATCGCAGTAGGAGT+CGG | - | chr5_1:53098591-53098610 | Msa0736570:intron | 65.0% | |
| ! | CATGGCGTGCGGTGCCAACT+TGG | + | chr5_1:53098649-53098668 | None:intergenic | 65.0% |
| ACAGGGAGCGGTCACGCTCC+AGG | - | chr5_1:53098333-53098352 | Msa0736570:intron | 70.0% | |
| CAGGGAGCGGTCACGCTCCA+GGG | - | chr5_1:53098334-53098353 | Msa0736570:intron | 70.0% | |
| AGCGGTCACGCTCCAGGGAC+AGG | - | chr5_1:53098339-53098358 | Msa0736570:intron | 70.0% | |
| GCGGTCACGCTCCAGGGACA+GGG | - | chr5_1:53098340-53098359 | Msa0736570:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 53092383 | 53099306 | 53092383 | ID=Msa0736570;Name=Msa0736570 |
| chr5_1 | mRNA | 53092383 | 53099306 | 53092383 | ID=Msa0736570-mRNA-1;Parent=Msa0736570;Name=Msa0736570-mRNA-1;_AED=0.14;_eAED=0.14;_QI=221|0.8|0.83|1|0.8|0.66|6|450|460 |
| chr5_1 | exon | 53092383 | 53093693 | 53092383 | ID=Msa0736570-mRNA-1:exon:14952;Parent=Msa0736570-mRNA-1 |
| chr5_1 | exon | 53095125 | 53095205 | 53095125 | ID=Msa0736570-mRNA-1:exon:14951;Parent=Msa0736570-mRNA-1 |
| chr5_1 | exon | 53095423 | 53095494 | 53095423 | ID=Msa0736570-mRNA-1:exon:14950;Parent=Msa0736570-mRNA-1 |
| chr5_1 | exon | 53096333 | 53096413 | 53096333 | ID=Msa0736570-mRNA-1:exon:14949;Parent=Msa0736570-mRNA-1 |
| chr5_1 | exon | 53097791 | 53098182 | 53097791 | ID=Msa0736570-mRNA-1:exon:14948;Parent=Msa0736570-mRNA-1 |
| chr5_1 | exon | 53099190 | 53099306 | 53099190 | ID=Msa0736570-mRNA-1:exon:14947;Parent=Msa0736570-mRNA-1 |
| chr5_1 | five_prime_UTR | 53099190 | 53099306 | 53099190 | ID=Msa0736570-mRNA-1:five_prime_utr;Parent=Msa0736570-mRNA-1 |
| chr5_1 | five_prime_UTR | 53098079 | 53098182 | 53098079 | ID=Msa0736570-mRNA-1:five_prime_utr;Parent=Msa0736570-mRNA-1 |
| chr5_1 | CDS | 53097791 | 53098078 | 53097791 | ID=Msa0736570-mRNA-1:cds;Parent=Msa0736570-mRNA-1 |
| chr5_1 | CDS | 53096333 | 53096413 | 53096333 | ID=Msa0736570-mRNA-1:cds;Parent=Msa0736570-mRNA-1 |
| chr5_1 | CDS | 53095423 | 53095494 | 53095423 | ID=Msa0736570-mRNA-1:cds;Parent=Msa0736570-mRNA-1 |
| chr5_1 | CDS | 53095125 | 53095205 | 53095125 | ID=Msa0736570-mRNA-1:cds;Parent=Msa0736570-mRNA-1 |
| chr5_1 | CDS | 53092833 | 53093693 | 53092833 | ID=Msa0736570-mRNA-1:cds;Parent=Msa0736570-mRNA-1 |
| chr5_1 | three_prime_UTR | 53092383 | 53092832 | 53092383 | ID=Msa0736570-mRNA-1:three_prime_utr;Parent=Msa0736570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
