Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0647950 | XP_013455932.1 | 70.925 | 227 | 6 | 2 | 1 | 167 | 1 | 227 | 1.66e-97 | 291 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0647950 | sp|Q9FFB3|VP241_ARATH | 58.952 | 229 | 32 | 3 | 1 | 167 | 1 | 229 | 1.93e-71 | 218 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0647950 | I3S694 | 70.925 | 227 | 6 | 2 | 1 | 167 | 1 | 227 | 7.91e-98 | 291 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0006880 | Msa0647950 | 0.839563 | 1.470284e-57 | -8.615850e-47 |
Msa0008090 | Msa0647950 | 0.847950 | 8.362190e-60 | -8.615850e-47 |
Msa0008200 | Msa0647950 | 0.805631 | 1.216342e-49 | -8.615850e-47 |
Msa0008410 | Msa0647950 | 0.847480 | 1.126252e-59 | -8.615850e-47 |
Msa0015140 | Msa0647950 | 0.803520 | 3.352694e-49 | -8.615850e-47 |
Msa0029260 | Msa0647950 | 0.845276 | 4.493392e-59 | -8.615850e-47 |
Msa0030300 | Msa0647950 | 0.859947 | 2.906350e-63 | -8.615850e-47 |
Msa0032260 | Msa0647950 | 0.802448 | 5.583070e-49 | -8.615850e-47 |
Msa0033880 | Msa0647950 | 0.851266 | 9.928052e-61 | -8.615850e-47 |
Msa0038000 | Msa0647950 | 0.837715 | 4.413038e-57 | -8.615850e-47 |
Msa0038440 | Msa0647950 | 0.820371 | 7.105301e-53 | -8.615850e-47 |
Msa0043860 | Msa0647950 | 0.803690 | 3.091142e-49 | -8.615850e-47 |
Msa0045490 | Msa0647950 | 0.814063 | 1.864739e-51 | -8.615850e-47 |
Msa0046740 | Msa0647950 | 0.819388 | 1.192548e-52 | -8.615850e-47 |
Msa0052860 | Msa0647950 | 0.819326 | 1.231747e-52 | -8.615850e-47 |
Msa0055100 | Msa0647950 | 0.812142 | 4.919822e-51 | -8.615850e-47 |
Msa0055150 | Msa0647950 | 0.831944 | 1.252207e-55 | -8.615850e-47 |
Msa0057140 | Msa0647950 | 0.833690 | 4.613936e-56 | -8.615850e-47 |
Msa0064350 | Msa0647950 | 0.801779 | 7.664429e-49 | -8.615850e-47 |
Msa0068020 | Msa0647950 | 0.816633 | 5.000536e-52 | -8.615850e-47 |
Msa0077900 | Msa0647950 | 0.823131 | 1.634017e-53 | -8.615850e-47 |
Msa0081650 | Msa0647950 | 0.807564 | 4.753293e-50 | -8.615850e-47 |
Msa0087800 | Msa0647950 | 0.817602 | 3.029125e-52 | -8.615850e-47 |
Msa0090030 | Msa0647950 | 0.810778 | 9.732703e-51 | -8.615850e-47 |
Msa0090520 | Msa0647950 | 0.831463 | 1.645732e-55 | -8.615850e-47 |
Msa0090550 | Msa0647950 | 0.835336 | 1.780512e-56 | -8.615850e-47 |
Msa0091610 | Msa0647950 | 0.869038 | 4.176472e-66 | -8.615850e-47 |
Msa0093010 | Msa0647950 | 0.818951 | 1.499538e-52 | -8.615850e-47 |
Msa0097950 | Msa0647950 | 0.829277 | 5.632969e-55 | -8.615850e-47 |
Msa0108550 | Msa0647950 | 0.805894 | 1.070942e-49 | -8.615850e-47 |
Msa0108870 | Msa0647950 | 0.809167 | 2.163007e-50 | -8.615850e-47 |
Msa0115370 | Msa0647950 | 0.876100 | 1.826513e-68 | -8.615850e-47 |
Msa0115990 | Msa0647950 | 0.844363 | 7.921185e-59 | -8.615850e-47 |
Msa0609000 | Msa0647950 | 0.802462 | 5.547266e-49 | -8.615850e-47 |
Msa0610130 | Msa0647950 | 0.803197 | 3.910287e-49 | -8.615850e-47 |
Msa0614510 | Msa0647950 | 0.812389 | 4.345800e-51 | -8.615850e-47 |
Msa0617660 | Msa0647950 | 0.840022 | 1.116545e-57 | -8.615850e-47 |
Msa0618950 | Msa0647950 | 0.856830 | 2.467323e-62 | -8.615850e-47 |
Msa0618970 | Msa0647950 | 0.842968 | 1.869364e-58 | -8.615850e-47 |
Msa0620230 | Msa0647950 | 0.802866 | 4.577907e-49 | -8.615850e-47 |
Msa0620330 | Msa0647950 | 0.854117 | 1.523708e-61 | -8.615850e-47 |
Msa0626680 | Msa0647950 | 0.804516 | 2.080587e-49 | -8.615850e-47 |
Msa0628290 | Msa0647950 | 0.820504 | 6.622751e-53 | -8.615850e-47 |
Msa0628420 | Msa0647950 | 0.818449 | 1.948633e-52 | -8.615850e-47 |
Msa0641140 | Msa0647950 | 0.808500 | 3.003911e-50 | -8.615850e-47 |
Msa0641190 | Msa0647950 | 0.810015 | 1.421779e-50 | -8.615850e-47 |
Msa0647930 | Msa0647950 | 0.993758 | 5.207772e-202 | -8.615850e-47 |
Msa0647950 | Msa0652300 | 0.838574 | 2.652208e-57 | -8.615850e-47 |
Msa0647950 | Msa0656960 | 0.833263 | 5.896442e-56 | -8.615850e-47 |
Msa0647950 | Msa0662630 | 0.858592 | 7.408779e-63 | -8.615850e-47 |
Msa0647950 | Msa0663900 | 0.814071 | 1.857208e-51 | -8.615850e-47 |
Msa0647950 | Msa0667790 | 0.827572 | 1.453194e-54 | -8.615850e-47 |
Msa0647950 | Msa0673270 | 0.834376 | 3.105842e-56 | -8.615850e-47 |
Msa0647950 | Msa0675990 | 0.807062 | 6.071507e-50 | -8.615850e-47 |
Msa0647950 | Msa0682090 | 0.833504 | 5.135850e-56 | -8.615850e-47 |
Msa0647950 | Msa0682140 | 0.827097 | 1.888508e-54 | -8.615850e-47 |
Msa0647950 | Msa0686080 | 0.813511 | 2.466770e-51 | -8.615850e-47 |
Msa0647950 | Msa0687020 | 0.810948 | 8.943004e-51 | -8.615850e-47 |
Msa0647950 | Msa0689500 | 0.846613 | 1.945444e-59 | -8.615850e-47 |
Msa0647950 | Msa0692840 | 0.811034 | 8.568024e-51 | -8.615850e-47 |
Msa0647950 | Msa0692940 | 0.819537 | 1.102294e-52 | -8.615850e-47 |
Msa0647950 | Msa0693210 | 0.807662 | 4.530392e-50 | -8.615850e-47 |
Msa0647950 | Msa0694840 | 0.848676 | 5.265206e-60 | -8.615850e-47 |
Msa0647950 | Msa0695130 | 0.806539 | 7.833578e-50 | -8.615850e-47 |
Msa0647950 | Msa0697720 | 0.812156 | 4.885709e-51 | -8.615850e-47 |
Msa0647950 | Msa0703910 | 0.813859 | 2.067776e-51 | -8.615850e-47 |
Msa0647950 | Msa0705390 | 0.823740 | 1.176927e-53 | -8.615850e-47 |
Msa0647950 | Msa0726080 | 0.847443 | 1.152581e-59 | -8.615850e-47 |
Msa0647950 | Msa0744100 | 0.801579 | 8.424877e-49 | -8.615850e-47 |
Msa0647950 | Msa0748430 | 0.811098 | 8.297763e-51 | -8.615850e-47 |
Msa0647950 | Msa0752700 | 0.828506 | 8.656346e-55 | -8.615850e-47 |
Msa0647950 | Msa0756930 | 0.824098 | 9.702283e-54 | -8.615850e-47 |
Msa0647950 | Msa0764690 | 0.817616 | 3.006509e-52 | -8.615850e-47 |
Msa0647950 | Msa0774750 | 0.815376 | 9.543594e-52 | -8.615850e-47 |
Msa0647950 | Msa0781270 | 0.812928 | 3.311327e-51 | -8.615850e-47 |
Msa0647950 | Msa0794970 | 0.812665 | 3.782449e-51 | -8.615850e-47 |
Msa0647950 | Msa0796440 | 0.807343 | 5.293579e-50 | -8.615850e-47 |
Msa0647950 | Msa0800370 | 0.800200 | 1.611491e-48 | -8.615850e-47 |
Msa0647950 | Msa0819060 | 0.812777 | 3.574453e-51 | -8.615850e-47 |
Msa0647950 | Msa0822310 | -0.817210 | 3.711206e-52 | -8.615850e-47 |
Msa0647950 | Msa0825270 | 0.804061 | 2.587805e-49 | -8.615850e-47 |
Msa0647950 | Msa0826500 | 0.801598 | 8.350031e-49 | -8.615850e-47 |
Msa0647950 | Msa0827280 | 0.869766 | 2.421160e-66 | -8.615850e-47 |
Msa0647950 | Msa0828680 | 0.856008 | 4.301660e-62 | -8.615850e-47 |
Msa0647950 | Msa0829220 | 0.834949 | 2.228882e-56 | -8.615850e-47 |
Msa0647950 | Msa0831100 | 0.827082 | 1.904299e-54 | -8.615850e-47 |
Msa0647950 | Msa0833190 | -0.814854 | 1.246492e-51 | -8.615850e-47 |
Msa0647950 | Msa0836500 | 0.845893 | 3.056764e-59 | -8.615850e-47 |
Msa0647950 | Msa0846230 | 0.845185 | 4.754417e-59 | -8.615850e-47 |
Msa0647950 | Msa0856090 | 0.819876 | 9.224028e-53 | -8.615850e-47 |
Msa0647950 | Msa0858440 | 0.801613 | 8.290684e-49 | -8.615850e-47 |
Msa0647950 | Msa0865570 | 0.821733 | 3.451614e-53 | -8.615850e-47 |
Msa0647950 | Msa0866400 | 0.808660 | 2.776637e-50 | -8.615850e-47 |
Msa0647950 | Msa0880450 | 0.805102 | 1.570034e-49 | -8.615850e-47 |
Msa0647950 | Msa0888940 | 0.802889 | 4.528809e-49 | -8.615850e-47 |
Msa0647950 | Msa0899350 | 0.820619 | 6.234526e-53 | -8.615850e-47 |
Msa0647950 | Msa0918390 | 0.814915 | 1.208163e-51 | -8.615850e-47 |
Msa0647950 | Msa0924150 | -0.804385 | 2.215887e-49 | -8.615850e-47 |
Msa0647950 | Msa0930140 | 0.803939 | 2.743669e-49 | -8.615850e-47 |
Msa0647950 | Msa0943170 | 0.804227 | 2.389668e-49 | -8.615850e-47 |
Msa0647950 | Msa0957870 | 0.833971 | 3.925551e-56 | -8.615850e-47 |
Msa0647950 | Msa0957970 | 0.825340 | 4.944841e-54 | -8.615850e-47 |
Msa0647950 | Msa0967370 | 0.832441 | 9.438951e-56 | -8.615850e-47 |
Msa0647950 | Msa0980540 | 0.827151 | 1.832977e-54 | -8.615850e-47 |
Msa0647950 | Msa0980940 | 0.823796 | 1.142266e-53 | -8.615850e-47 |
Msa0647950 | Msa0981430 | 0.816064 | 6.704631e-52 | -8.615850e-47 |
Msa0647950 | Msa0990580 | 0.816965 | 4.212897e-52 | -8.615850e-47 |
Msa0647950 | Msa0997430 | 0.801959 | 7.038661e-49 | -8.615850e-47 |
Msa0647950 | Msa1013040 | 0.807757 | 4.324891e-50 | -8.615850e-47 |
Msa0647950 | Msa1024750 | 0.812304 | 4.534816e-51 | -8.615850e-47 |
Msa0647950 | Msa1025260 | 0.824715 | 6.945623e-54 | -8.615850e-47 |
Msa0647950 | Msa1025940 | 0.828563 | 8.387324e-55 | -8.615850e-47 |
Msa0647950 | Msa1031770 | 0.821007 | 5.074943e-53 | -8.615850e-47 |
Msa0647950 | Msa1039900 | 0.827026 | 1.963326e-54 | -8.615850e-47 |
Msa0647950 | Msa1040800 | 0.802939 | 4.421555e-49 | -8.615850e-47 |
Msa0647950 | Msa1041850 | 0.808477 | 3.038436e-50 | -8.615850e-47 |
Msa0647950 | Msa1054010 | 0.832552 | 8.859037e-56 | -8.615850e-47 |
Msa0647950 | Msa1067890 | -0.810619 | 1.053290e-50 | -8.615850e-47 |
Msa0647950 | Msa1071320 | 0.803966 | 2.709157e-49 | -8.615850e-47 |
Msa0647950 | Msa1081560 | 0.815538 | 8.784938e-52 | -8.615850e-47 |
Msa0647950 | Msa1089320 | 0.840830 | 6.865451e-58 | -8.615850e-47 |
Msa0647950 | Msa1089840 | 0.815639 | 8.337635e-52 | -8.615850e-47 |
Msa0647950 | Msa1093330 | 0.807647 | 4.563945e-50 | -8.615850e-47 |
Msa0647950 | Msa1109350 | 0.830373 | 3.046921e-55 | -8.615850e-47 |
Msa0647950 | Msa1112390 | 0.826326 | 2.884761e-54 | -8.615850e-47 |
Msa0647950 | Msa1128330 | 0.816644 | 4.971371e-52 | -8.615850e-47 |
Msa0647950 | Msa1133400 | 0.816833 | 4.509313e-52 | -8.615850e-47 |
Msa0647950 | Msa1135800 | -0.809615 | 1.733222e-50 | -8.615850e-47 |
Msa0647950 | Msa1144970 | 0.804969 | 1.673282e-49 | -8.615850e-47 |
Msa0647950 | Msa1152520 | 0.817058 | 4.015008e-52 | -8.615850e-47 |
Msa0647950 | Msa1154490 | 0.803230 | 3.849500e-49 | -8.615850e-47 |
Msa0647950 | Msa1158770 | 0.803463 | 3.444597e-49 | -8.615850e-47 |
Msa0647950 | Msa1165870 | 0.809915 | 1.494109e-50 | -8.615850e-47 |
Msa0647950 | Msa1168580 | 0.802218 | 6.227457e-49 | -8.615850e-47 |
Msa0647950 | Msa1171830 | 0.837837 | 4.105494e-57 | -8.615850e-47 |
Msa0647950 | Msa1174850 | 0.801306 | 9.584248e-49 | -8.615850e-47 |
Msa0647950 | Msa1176360 | 0.808688 | 2.738715e-50 | -8.615850e-47 |
Msa0647950 | Msa1178060 | 0.837180 | 6.051834e-57 | -8.615850e-47 |
Msa0647950 | Msa1184370 | 0.807763 | 4.311969e-50 | -8.615850e-47 |
Msa0647950 | Msa1186130 | 0.832631 | 8.466094e-56 | -8.615850e-47 |
Msa0647950 | Msa1201830 | 0.818678 | 1.729495e-52 | -8.615850e-47 |
Msa0647950 | Msa1202150 | 0.827349 | 1.643433e-54 | -8.615850e-47 |
Msa0647950 | Msa1202580 | 0.803153 | 3.992723e-49 | -8.615850e-47 |
Msa0647950 | Msa1203880 | 0.817239 | 3.655945e-52 | -8.615850e-47 |
Msa0647950 | Msa1206310 | 0.812988 | 3.213204e-51 | -8.615850e-47 |
Msa0647950 | Msa1206360 | 0.801546 | 8.556106e-49 | -8.615850e-47 |
Msa0647950 | Msa1206650 | 0.833172 | 6.211187e-56 | -8.615850e-47 |
Msa0647950 | Msa1211830 | 0.819569 | 1.084210e-52 | -8.615850e-47 |
Msa0647950 | Msa1226610 | 0.800131 | 1.664600e-48 | -8.615850e-47 |
Msa0647950 | Msa1227690 | 0.815749 | 7.881825e-52 | -8.615850e-47 |
Msa0647950 | Msa1233850 | 0.821228 | 4.514912e-53 | -8.615850e-47 |
Msa0647950 | Msa1242580 | -0.814469 | 1.516183e-51 | -8.615850e-47 |
Msa0647950 | Msa1256470 | 0.804246 | 2.368124e-49 | -8.615850e-47 |
Msa0647950 | Msa1269300 | 0.810655 | 1.034964e-50 | -8.615850e-47 |
Msa0647950 | Msa1278900 | 0.847764 | 9.404501e-60 | -8.615850e-47 |
Msa0647950 | Msa1279590 | 0.804230 | 2.386672e-49 | -8.615850e-47 |
Msa0647950 | Msa1294840 | 0.812646 | 3.818464e-51 | -8.615850e-47 |
Msa0647950 | Msa1295110 | 0.823225 | 1.553657e-53 | -8.615850e-47 |
Msa0647950 | Msa1295490 | -0.806955 | 6.395751e-50 | -8.615850e-47 |
Msa0647950 | Msa1295910 | 0.810546 | 1.092277e-50 | -8.615850e-47 |
Msa0647950 | Msa1304820 | 0.810835 | 9.461727e-51 | -8.615850e-47 |
Msa0647950 | Msa1305710 | 0.825123 | 5.565401e-54 | -8.615850e-47 |
Msa0647950 | Msa1306390 | 0.811456 | 6.938967e-51 | -8.615850e-47 |
Msa0647950 | Msa1307180 | 0.823468 | 1.362748e-53 | -8.615850e-47 |
Msa0647950 | Msa1315750 | 0.809401 | 1.926753e-50 | -8.615850e-47 |
Msa0647950 | Msa1316360 | 0.820175 | 7.881582e-53 | -8.615850e-47 |
Msa0647950 | Msa1331350 | 0.817835 | 2.683809e-52 | -8.615850e-47 |
Msa0647950 | Msa1336560 | 0.800318 | 1.524527e-48 | -8.615850e-47 |
Msa0647950 | Msa1340830 | 0.815457 | 9.155883e-52 | -8.615850e-47 |
Msa0647950 | Msa1353980 | 0.804221 | 2.396893e-49 | -8.615850e-47 |
Msa0647950 | Msa1357190 | 0.804305 | 2.302963e-49 | -8.615850e-47 |
Msa0647950 | Msa1362420 | 0.877459 | 6.180981e-69 | -8.615850e-47 |
Msa0647950 | Msa1364210 | 0.841560 | 4.411937e-58 | -8.615850e-47 |
Msa0647950 | Msa1365860 | 0.815137 | 1.078480e-51 | -8.615850e-47 |
Msa0647950 | Msa1370590 | 0.808376 | 3.192613e-50 | -8.615850e-47 |
Msa0647950 | Msa1371090 | 0.821987 | 3.013927e-53 | -8.615850e-47 |
Msa0647950 | Msa1371240 | 0.832067 | 1.168134e-55 | -8.615850e-47 |
Msa0647950 | Msa1371640 | 0.804081 | 2.562950e-49 | -8.615850e-47 |
Msa0647950 | Msa1376130 | 0.804511 | 2.085902e-49 | -8.615850e-47 |
Msa0647950 | Msa1376200 | 0.817647 | 2.958258e-52 | -8.615850e-47 |
Msa0647950 | Msa1376650 | 0.820087 | 8.256608e-53 | -8.615850e-47 |
Msa0647950 | Msa1384100 | 0.805763 | 1.141009e-49 | -8.615850e-47 |
Msa0647950 | Msa1384870 | 0.811881 | 5.608516e-51 | -8.615850e-47 |
Msa0647950 | Msa1389850 | 0.825752 | 3.949783e-54 | -8.615850e-47 |
Msa0647950 | Msa1389880 | 0.801039 | 1.086868e-48 | -8.615850e-47 |
Msa0647950 | Msa1395600 | -0.802686 | 4.987117e-49 | -8.615850e-47 |
Msa0647950 | Msa1396870 | 0.807176 | 5.744375e-50 | -8.615850e-47 |
Msa0647950 | Msa1407190 | 0.833646 | 4.733417e-56 | -8.615850e-47 |
Msa0647950 | Msa1410510 | 0.803739 | 3.019087e-49 | -8.615850e-47 |
Msa0647950 | Msa1411950 | 0.808629 | 2.819116e-50 | -8.615850e-47 |
Msa0647950 | Msa1432130 | 0.819896 | 9.126686e-53 | -8.615850e-47 |
Msa0647950 | Msa1432480 | 0.827550 | 1.470491e-54 | -8.615850e-47 |
Msa0647950 | Msa1435770 | 0.835059 | 2.091561e-56 | -8.615850e-47 |
Msa0647950 | Msa1436520 | 0.800264 | 1.563717e-48 | -8.615850e-47 |
Msa0647950 | Msa1444120 | 0.801084 | 1.063920e-48 | -8.615850e-47 |
Msa0647950 | Msa1445940 | 0.804299 | 2.309231e-49 | -8.615850e-47 |
Msa0647950 | Msa1452480 | 0.800351 | 1.501303e-48 | -8.615850e-47 |
Msa0647950 | Msa1454680 | 0.811107 | 8.261332e-51 | -8.615850e-47 |
Msa0647950 | Msa1461280 | 0.839379 | 1.641694e-57 | -8.615850e-47 |
Msa0123510 | Msa0647950 | 0.824541 | 7.632227e-54 | -8.615850e-47 |
Msa0125450 | Msa0647950 | 0.801034 | 1.089451e-48 | -8.615850e-47 |
Msa0125540 | Msa0647950 | 0.805520 | 1.283247e-49 | -8.615850e-47 |
Msa0127850 | Msa0647950 | 0.872634 | 2.736128e-67 | -8.615850e-47 |
Msa0131450 | Msa0647950 | 0.811705 | 6.125526e-51 | -8.615850e-47 |
Msa0136120 | Msa0647950 | 0.827157 | 1.826626e-54 | -8.615850e-47 |
Msa0137990 | Msa0647950 | 0.831482 | 1.628201e-55 | -8.615850e-47 |
Msa0142950 | Msa0647950 | 0.809037 | 2.306841e-50 | -8.615850e-47 |
Msa0147980 | Msa0647950 | 0.812563 | 3.981862e-51 | -8.615850e-47 |
Msa0150260 | Msa0647950 | 0.808657 | 2.780955e-50 | -8.615850e-47 |
Msa0165440 | Msa0647950 | 0.815259 | 1.013145e-51 | -8.615850e-47 |
Msa0166750 | Msa0647950 | 0.823517 | 1.327176e-53 | -8.615850e-47 |
Msa0167980 | Msa0647950 | 0.812991 | 3.208739e-51 | -8.615850e-47 |
Msa0169300 | Msa0647950 | 0.844271 | 8.384818e-59 | -8.615850e-47 |
Msa0170570 | Msa0647950 | 0.808851 | 2.528049e-50 | -8.615850e-47 |
Msa0174000 | Msa0647950 | 0.823658 | 1.230042e-53 | -8.615850e-47 |
Msa0175540 | Msa0647950 | 0.802272 | 6.068312e-49 | -8.615850e-47 |
Msa0177210 | Msa0647950 | 0.801982 | 6.963560e-49 | -8.615850e-47 |
Msa0177230 | Msa0647950 | 0.806045 | 9.952541e-50 | -8.615850e-47 |
Msa0183870 | Msa0647950 | 0.831671 | 1.462554e-55 | -8.615850e-47 |
Msa0183900 | Msa0647950 | 0.830837 | 2.345002e-55 | -8.615850e-47 |
Msa0185510 | Msa0647950 | 0.815078 | 1.111618e-51 | -8.615850e-47 |
Msa0190590 | Msa0647950 | 0.800954 | 1.130896e-48 | -8.615850e-47 |
Msa0191050 | Msa0647950 | 0.835085 | 2.059688e-56 | -8.615850e-47 |
Msa0191070 | Msa0647950 | 0.816636 | 4.994041e-52 | -8.615850e-47 |
Msa0198530 | Msa0647950 | 0.812383 | 4.358558e-51 | -8.615850e-47 |
Msa0211860 | Msa0647950 | 0.852566 | 4.244941e-61 | -8.615850e-47 |
Msa0224030 | Msa0647950 | 0.826333 | 2.872833e-54 | -8.615850e-47 |
Msa0233350 | Msa0647950 | 0.835543 | 1.578825e-56 | -8.615850e-47 |
Msa0377450 | Msa0647950 | 0.806794 | 6.918710e-50 | -8.615850e-47 |
Msa0378970 | Msa0647950 | 0.830352 | 3.081673e-55 | -8.615850e-47 |
Msa0381000 | Msa0647950 | 0.811855 | 5.682319e-51 | -8.615850e-47 |
Msa0381080 | Msa0647950 | 0.812885 | 3.384691e-51 | -8.615850e-47 |
Msa0384880 | Msa0647950 | 0.806625 | 7.509640e-50 | -8.615850e-47 |
Msa0385490 | Msa0647950 | 0.811854 | 5.685908e-51 | -8.615850e-47 |
Msa0385500 | Msa0647950 | 0.813607 | 2.350031e-51 | -8.615850e-47 |
Msa0405650 | Msa0647950 | 0.815529 | 8.823624e-52 | -8.615850e-47 |
Msa0413730 | Msa0647950 | 0.801414 | 9.106897e-49 | -8.615850e-47 |
Msa0419520 | Msa0647950 | 0.813161 | 2.944710e-51 | -8.615850e-47 |
Msa0419720 | Msa0647950 | 0.837049 | 6.535340e-57 | -8.615850e-47 |
Msa0428170 | Msa0647950 | 0.803864 | 2.844685e-49 | -8.615850e-47 |
Msa0432500 | Msa0647950 | 0.808893 | 2.476530e-50 | -8.615850e-47 |
Msa0435220 | Msa0647950 | 0.815974 | 7.020048e-52 | -8.615850e-47 |
Msa0437400 | Msa0647950 | 0.812610 | 3.887049e-51 | -8.615850e-47 |
Msa0439890 | Msa0647950 | 0.824759 | 6.781420e-54 | -8.615850e-47 |
Msa0442610 | Msa0647950 | 0.806850 | 6.733822e-50 | -8.615850e-47 |
Msa0443430 | Msa0647950 | 0.801447 | 8.967442e-49 | -8.615850e-47 |
Msa0458640 | Msa0647950 | 0.806483 | 8.047316e-50 | -8.615850e-47 |
Msa0465550 | Msa0647950 | 0.816861 | 4.445214e-52 | -8.615850e-47 |
Msa0467780 | Msa0647950 | 0.817670 | 2.924028e-52 | -8.615850e-47 |
Msa0474700 | Msa0647950 | 0.813639 | 2.311361e-51 | -8.615850e-47 |
Msa0474940 | Msa0647950 | 0.805030 | 1.625276e-49 | -8.615850e-47 |
Msa0478580 | Msa0647950 | 0.802422 | 5.651995e-49 | -8.615850e-47 |
Msa0482040 | Msa0647950 | 0.826269 | 2.975793e-54 | -8.615850e-47 |
Msa0239940 | Msa0647950 | 0.820025 | 8.529566e-53 | -8.615850e-47 |
Msa0244980 | Msa0647950 | 0.823541 | 1.310179e-53 | -8.615850e-47 |
Msa0257490 | Msa0647950 | 0.800324 | 1.520033e-48 | -8.615850e-47 |
Msa0264530 | Msa0647950 | 0.810100 | 1.363509e-50 | -8.615850e-47 |
Msa0267870 | Msa0647950 | 0.813924 | 2.000657e-51 | -8.615850e-47 |
Msa0269470 | Msa0647950 | 0.829162 | 6.005403e-55 | -8.615850e-47 |
Msa0275360 | Msa0647950 | 0.808904 | 2.462621e-50 | -8.615850e-47 |
Msa0281480 | Msa0647950 | 0.803349 | 3.637794e-49 | -8.615850e-47 |
Msa0282890 | Msa0647950 | 0.806526 | 7.881657e-50 | -8.615850e-47 |
Msa0283420 | Msa0647950 | 0.807423 | 5.092425e-50 | -8.615850e-47 |
Msa0291500 | Msa0647950 | 0.817708 | 2.866185e-52 | -8.615850e-47 |
Msa0295590 | Msa0647950 | 0.824048 | 9.966445e-54 | -8.615850e-47 |
Msa0296790 | Msa0647950 | 0.803665 | 3.128608e-49 | -8.615850e-47 |
Msa0296920 | Msa0647950 | 0.806749 | 7.072184e-50 | -8.615850e-47 |
Msa0304590 | Msa0647950 | 0.810631 | 1.047365e-50 | -8.615850e-47 |
Msa0304660 | Msa0647950 | 0.820745 | 5.830399e-53 | -8.615850e-47 |
Msa0307560 | Msa0647950 | 0.802693 | 4.969554e-49 | -8.615850e-47 |
Msa0308200 | Msa0647950 | 0.820749 | 5.818751e-53 | -8.615850e-47 |
Msa0308220 | Msa0647950 | 0.813439 | 2.558068e-51 | -8.615850e-47 |
Msa0311700 | Msa0647950 | 0.802209 | 6.254758e-49 | -8.615850e-47 |
Msa0320610 | Msa0647950 | 0.809293 | 2.032638e-50 | -8.615850e-47 |
Msa0321690 | Msa0647950 | 0.801686 | 8.009518e-49 | -8.615850e-47 |
Msa0324240 | Msa0647950 | 0.816194 | 6.271795e-52 | -8.615850e-47 |
Msa0329350 | Msa0647950 | 0.810321 | 1.221361e-50 | -8.615850e-47 |
Msa0331700 | Msa0647950 | 0.820002 | 8.632060e-53 | -8.615850e-47 |
Msa0342290 | Msa0647950 | 0.822167 | 2.737705e-53 | -8.615850e-47 |
Msa0343190 | Msa0647950 | 0.849588 | 2.936490e-60 | -8.615850e-47 |
Msa0363060 | Msa0647950 | 0.800890 | 1.165584e-48 | -8.615850e-47 |
Msa0482940 | Msa0647950 | 0.802837 | 4.641411e-49 | -8.615850e-47 |
Msa0484740 | Msa0647950 | 0.875054 | 4.167170e-68 | -8.615850e-47 |
Msa0484840 | Msa0647950 | 0.812924 | 3.318674e-51 | -8.615850e-47 |
Msa0505380 | Msa0647950 | 0.808109 | 3.640028e-50 | -8.615850e-47 |
Msa0511770 | Msa0647950 | 0.821567 | 3.768902e-53 | -8.615850e-47 |
Msa0514180 | Msa0647950 | 0.802396 | 5.722331e-49 | -8.615850e-47 |
Msa0517640 | Msa0647950 | 0.812144 | 4.914186e-51 | -8.615850e-47 |
Msa0518440 | Msa0647950 | 0.803867 | 2.839548e-49 | -8.615850e-47 |
Msa0527910 | Msa0647950 | 0.829171 | 5.975910e-55 | -8.615850e-47 |
Msa0531250 | Msa0647950 | 0.801906 | 7.217024e-49 | -8.615850e-47 |
Msa0532980 | Msa0647950 | 0.817055 | 4.021043e-52 | -8.615850e-47 |
Msa0546570 | Msa0647950 | 0.862414 | 5.153117e-64 | -8.615850e-47 |
Msa0547990 | Msa0647950 | 0.803138 | 4.021890e-49 | -8.615850e-47 |
Msa0550570 | Msa0647950 | 0.809102 | 2.233055e-50 | -8.615850e-47 |
Msa0552810 | Msa0647950 | 0.800676 | 1.288826e-48 | -8.615850e-47 |
Msa0556790 | Msa0647950 | 0.836394 | 9.601867e-57 | -8.615850e-47 |
Msa0556860 | Msa0647950 | 0.826396 | 2.775312e-54 | -8.615850e-47 |
Msa0560500 | Msa0647950 | 0.816584 | 5.128885e-52 | -8.615850e-47 |
Msa0562940 | Msa0647950 | 0.802720 | 4.907620e-49 | -8.615850e-47 |
Msa0564130 | Msa0647950 | 0.838923 | 2.154880e-57 | -8.615850e-47 |
Msa0565620 | Msa0647950 | -0.808250 | 3.396241e-50 | -8.615850e-47 |
Msa0576680 | Msa0647950 | 0.802497 | 5.455202e-49 | -8.615850e-47 |
Msa0580230 | Msa0647950 | 0.806399 | 8.383894e-50 | -8.615850e-47 |
Msa0580280 | Msa0647950 | 0.807605 | 4.657696e-50 | -8.615850e-47 |
Msa0586850 | Msa0647950 | 0.805608 | 1.229818e-49 | -8.615850e-47 |
Msa0588090 | Msa0647950 | 0.816438 | 5.530192e-52 | -8.615850e-47 |
Msa0594800 | Msa0647950 | 0.807270 | 5.485900e-50 | -8.615850e-47 |
Msa0600450 | Msa0647950 | 0.804306 | 2.301852e-49 | -8.615850e-47 |
Msa0600600 | Msa0647950 | 0.819581 | 1.077243e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0647950 | MtrunA17_Chr4g0028231 | 70.925 | 227 | 6 | 2 | 1 | 167 | 1 | 227 | 1.52e-101 | 291 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0647950 | AT5G22950.1 | 58.952 | 229 | 32 | 3 | 1 | 167 | 1 | 229 | 1.96e-72 | 218 |
Msa0647950 | AT3G45000.2 | 75.758 | 132 | 30 | 1 | 38 | 167 | 8 | 139 | 7.04e-54 | 167 |
Msa0647950 | AT3G45000.1 | 75.758 | 132 | 30 | 1 | 38 | 167 | 69 | 200 | 1.78e-53 | 168 |
Find 53 sgRNAs with CRISPR-Local
Find 383 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGCAATAACTGTTGCGGATT+TGG | 0.126196 | 4_3:-54295928 | None:intergenic |
ATTATATATACAAAATAAAA+TGG | 0.182644 | 4_3:-54295855 | None:intergenic |
AAGAAGAAATGGAAGAAATT+AGG | 0.185877 | 4_3:+54300655 | Msa0647950:CDS |
ACTCTCTTATAATATATATC+AGG | 0.254147 | 4_3:-54300825 | None:intergenic |
TGCATAGCAACAGCCATTTC+AGG | 0.256684 | 4_3:-54300207 | None:intergenic |
GAATGAAAATTAATTATTCT+TGG | 0.264027 | 4_3:-54295814 | None:intergenic |
CGCAACAGTTATTGCGAGAT+TGG | 0.304376 | 4_3:+54295935 | Msa0647950:CDS |
AACTGTTGCGGATTTGGTTT+CGG | 0.312520 | 4_3:-54295922 | None:intergenic |
CCCATTTGTAATATTAGTAT+TGG | 0.323850 | 4_3:+54300865 | Msa0647950:three_prime_UTR |
TCCAATACTAATATTACAAA+TGG | 0.345851 | 4_3:-54300866 | None:intergenic |
TTATATATACAAAATAAAAT+GGG | 0.355594 | 4_3:-54295854 | None:intergenic |
TGACCTGACTTTAGCGAGTC+TGG | 0.371271 | 4_3:-54300679 | None:intergenic |
AGAAGAAATGGAAGAAATTA+GGG | 0.376649 | 4_3:+54300656 | Msa0647950:CDS |
CCTCACAGCTTCAGGAAGTT+GGG | 0.383224 | 4_3:-54300474 | None:intergenic |
TCCTCACAGCTTCAGGAAGT+TGG | 0.391690 | 4_3:-54300475 | None:intergenic |
TCATAAACGAGTTTCTAAAA+AGG | 0.417167 | 4_3:+54300699 | Msa0647950:exon |
TGTAATATTAGTATTGGAAA+AGG | 0.419711 | 4_3:+54300871 | Msa0647950:three_prime_UTR |
CCTCATGAAGGCTCCTGAAA+TGG | 0.421101 | 4_3:+54300194 | Msa0647950:CDS |
CATATTAGCTATGTTGCCAT+TGG | 0.449366 | 4_3:-54300904 | None:intergenic |
TCCTCTGCGGCACTTTGAGC+AGG | 0.453503 | 4_3:-54300515 | None:intergenic |
TTCAGCAATTGCTCGTACTG+TGG | 0.454062 | 4_3:+54300128 | Msa0647950:intron |
GGAATATAAATTATCGAAGA+AGG | 0.474281 | 4_3:-54295761 | None:intergenic |
TGTTGATGATGAAGAAGAAA+TGG | 0.478357 | 4_3:+54300644 | Msa0647950:CDS |
TTCTTCATCATCAACACCCT+CGG | 0.485224 | 4_3:-54300637 | None:intergenic |
CCAATACTAATATTACAAAT+GGG | 0.494913 | 4_3:-54300865 | None:intergenic |
AGGTGGGTGTGTTGTTCGTA+AGG | 0.498532 | 4_3:+54295693 | Msa0647950:five_prime_UTR |
GTTTCAGGCAGGAGTAATTG+AGG | 0.506660 | 4_3:+54300343 | Msa0647950:intron |
GGGCCAGACTCGCTAAAGTC+AGG | 0.512607 | 4_3:+54300676 | Msa0647950:CDS |
AAAGTCTTAACTGAATTAGC+TGG | 0.521196 | 4_3:+54300440 | Msa0647950:CDS |
AAAGAAGAAGATATTGAAGG+TGG | 0.525044 | 4_3:+54295676 | Msa0647950:five_prime_UTR |
TCAGCAATTGCTCGTACTGT+GGG | 0.530452 | 4_3:+54300129 | Msa0647950:intron |
AACATTGAACGACAAATTCG+CGG | 0.539995 | 4_3:+54295985 | Msa0647950:CDS |
TGAAGCTGTGAGGAAACAAA+AGG | 0.551851 | 4_3:+54300484 | Msa0647950:CDS |
CAATCTCGCAATAACTGTTG+CGG | 0.559721 | 4_3:-54295934 | None:intergenic |
AAAAGGTGACTTATTACCAA+TGG | 0.563748 | 4_3:+54300888 | Msa0647950:three_prime_UTR |
TGCTCAAAGTGCCGCAGAGG+AGG | 0.582103 | 4_3:+54300517 | Msa0647950:CDS |
CTCTCTTATAATATATATCA+GGG | 0.589567 | 4_3:-54300824 | None:intergenic |
AAGAAGAAGATATTGAAGGT+GGG | 0.594381 | 4_3:+54295677 | Msa0647950:five_prime_UTR |
ACCTGCTCAAAGTGCCGCAG+AGG | 0.595296 | 4_3:+54300514 | Msa0647950:CDS |
TATATATACAAAATAAAATG+GGG | 0.596746 | 4_3:-54295853 | None:intergenic |
TGACTCAGCATTAGATTCTG+AGG | 0.600712 | 4_3:+54300385 | Msa0647950:CDS |
TGAAGATTAGATCTTACTGA+AGG | 0.602356 | 4_3:-54295782 | None:intergenic |
CAGGAAGATGCTATAGCCGA+GGG | 0.609938 | 4_3:+54300621 | Msa0647950:intron |
GCTTGTCAATAACCTCATGA+AGG | 0.612171 | 4_3:+54300182 | Msa0647950:CDS |
CCATTTCAGGAGCCTTCATG+AGG | 0.615981 | 4_3:-54300194 | None:intergenic |
GCAGGAAGATGCTATAGCCG+AGG | 0.620355 | 4_3:+54300620 | Msa0647950:intron |
ATTGACAAGCTTCATAACCT+CGG | 0.641959 | 4_3:-54300169 | None:intergenic |
TATATCAGGGCACAATGCAG+AGG | 0.655974 | 4_3:-54300811 | None:intergenic |
CACAGCTTCAGGAAGTTGGG+CGG | 0.666714 | 4_3:-54300471 | None:intergenic |
CCCAACTTCCTGAAGCTGTG+AGG | 0.668950 | 4_3:+54300474 | Msa0647950:CDS |
AACTGCATGTACCTCCTCTG+CGG | 0.671034 | 4_3:-54300528 | None:intergenic |
ACATCTATCAAAGAGTGCCG+AGG | 0.689000 | 4_3:+54300152 | Msa0647950:CDS |
GTTCAGCAAAGAAATGACCA+AGG | 0.706921 | 4_3:+54300233 | Msa0647950:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTATTTTTTTTATTT+TGG | + | chr4_3:54296763-54296782 | Msa0647950:intron | 0.0% |
!!! | TTTTTTATTTTTTTTATTTT+GGG | + | chr4_3:54296764-54296783 | Msa0647950:intron | 0.0% |
!! | TATATATACAAAATAAAATG+GGG | - | chr4_3:54295856-54295875 | None:intergenic | 10.0% |
!!! | ATATTTTTTAATCTTTACAA+TGG | + | chr4_3:54298959-54298978 | Msa0647950:intron | 10.0% |
!! | GAATGAAAATTAATTATTCT+TGG | - | chr4_3:54295817-54295836 | None:intergenic | 15.0% |
!!! | TTTTATTCTTAAATTACTAC+AGG | - | chr4_3:54296249-54296268 | None:intergenic | 15.0% |
!!! | TTTTTAATTAAGAGTATGTT+TGG | - | chr4_3:54297623-54297642 | None:intergenic | 15.0% |
!! | AAAAAAAACCTAAGTTAAAT+AGG | + | chr4_3:54297758-54297777 | Msa0647950:intron | 15.0% |
!! | TAAAAAGAAGAAGATATTGA+AGG | + | chr4_3:54295673-54295692 | Msa0647950:five_prime_UTR | 20.0% |
!!! | TAAGAATAAAATTAGCTTAG+TGG | + | chr4_3:54296258-54296277 | Msa0647950:intron | 20.0% |
!! | GTTTCTCTTAAAAAATTTCT+AGG | - | chr4_3:54296499-54296518 | None:intergenic | 20.0% |
!! | AAATTTAGTGATTAATGAGT+TGG | + | chr4_3:54296528-54296547 | Msa0647950:intron | 20.0% |
!!! | GTTTTATCATAAACCATATT+TGG | - | chr4_3:54296556-54296575 | None:intergenic | 20.0% |
!! | TATGGTTTATGATAAAACAT+AGG | + | chr4_3:54296558-54296577 | Msa0647950:intron | 20.0% |
!! | ATGGTTTATGATAAAACATA+GGG | + | chr4_3:54296559-54296578 | Msa0647950:intron | 20.0% |
!!! | AGTGTATATACAAGTTTTTA+TGG | + | chr4_3:54296951-54296970 | Msa0647950:intron | 20.0% |
!! | AAAATCTAATATCCTTATCA+TGG | + | chr4_3:54297240-54297259 | Msa0647950:intron | 20.0% |
!!! | CATAATTGTTTCATTTTAGA+TGG | + | chr4_3:54298884-54298903 | Msa0647950:intron | 20.0% |
!!! | TTTTTTAATCTTTACAATGG+CGG | + | chr4_3:54298962-54298981 | Msa0647950:intron | 20.0% |
!!! | TATGGTGTTTTACAATTATA+AGG | + | chr4_3:54299171-54299190 | Msa0647950:intron | 20.0% |
!! | AAGATAAAACTTCATGAAAT+TGG | + | chr4_3:54299534-54299553 | Msa0647950:intron | 20.0% |
!! | TCTTATCTCAAGTATTTATT+TGG | + | chr4_3:54299888-54299907 | Msa0647950:intron | 20.0% |
!! | GTTAATTGCATGATAATTAT+TGG | + | chr4_3:54300309-54300328 | Msa0647950:intron | 20.0% |
!! | CTCTCTTATAATATATATCA+GGG | - | chr4_3:54300827-54300846 | None:intergenic | 20.0% |
!! | ACTCTCTTATAATATATATC+AGG | - | chr4_3:54300828-54300847 | None:intergenic | 20.0% |
!! | CCAATACTAATATTACAAAT+GGG | - | chr4_3:54300868-54300887 | None:intergenic | 20.0% |
!! | TCCAATACTAATATTACAAA+TGG | - | chr4_3:54300869-54300888 | None:intergenic | 20.0% |
!!! | TGTAATATTAGTATTGGAAA+AGG | + | chr4_3:54300871-54300890 | Msa0647950:three_prime_UTR | 20.0% |
! | GGAATATAAATTATCGAAGA+AGG | - | chr4_3:54295764-54295783 | None:intergenic | 25.0% |
!!! | ATAAAATGGGGATTTTTTGA+AGG | - | chr4_3:54295844-54295863 | None:intergenic | 25.0% |
!!! | GTTTTAAGAGAGATCAAAAA+TGG | - | chr4_3:54296017-54296036 | None:intergenic | 25.0% |
! | GAAGAATCAAGTATCAATTA+GGG | - | chr4_3:54296039-54296058 | None:intergenic | 25.0% |
! | AGAAGAATCAAGTATCAATT+AGG | - | chr4_3:54296040-54296059 | None:intergenic | 25.0% |
! | TTGATTCTTCTGATTATTTG+TGG | + | chr4_3:54296049-54296068 | Msa0647950:intron | 25.0% |
! | TGATTATTTGTGGTTATGAT+TGG | + | chr4_3:54296059-54296078 | Msa0647950:intron | 25.0% |
!!! | TTCATAACCAATGCTATTTT+TGG | + | chr4_3:54297127-54297146 | Msa0647950:intron | 25.0% |
!!! | GTCTTCTTTTTTAGATTTCA+AGG | + | chr4_3:54297178-54297197 | Msa0647950:intron | 25.0% |
! | ATTGAACAAATACCATGATA+AGG | - | chr4_3:54297255-54297274 | None:intergenic | 25.0% |
! | ATGGTATTTGTTCAATTTAC+AGG | + | chr4_3:54297259-54297278 | Msa0647950:intron | 25.0% |
!! | TAGTTTTTGCAAAATCACAA+TGG | - | chr4_3:54297473-54297492 | None:intergenic | 25.0% |
!! | CAAGTTTACCTATTTAACTT+AGG | - | chr4_3:54297769-54297788 | None:intergenic | 25.0% |
!! | TGATGATCAAATGTTTGTTA+TGG | + | chr4_3:54297808-54297827 | Msa0647950:intron | 25.0% |
!!! | GATGATCAAATGTTTGTTAT+GGG | + | chr4_3:54297809-54297828 | Msa0647950:intron | 25.0% |
!!! | ATGATCAAATGTTTGTTATG+GGG | + | chr4_3:54297810-54297829 | Msa0647950:intron | 25.0% |
!! | AACTGTCTACAGATTTTTAT+AGG | + | chr4_3:54297846-54297865 | Msa0647950:intron | 25.0% |
!! | CAGATTTTTATAGGTTTTTG+AGG | + | chr4_3:54297855-54297874 | Msa0647950:intron | 25.0% |
!! | CGGATTTTATCTATATTTTG+AGG | + | chr4_3:54298058-54298077 | Msa0647950:intron | 25.0% |
!!! | TTATCTATATTTTGAGGTTG+AGG | + | chr4_3:54298064-54298083 | Msa0647950:intron | 25.0% |
!! | AAGTCTTAATTTTATTCACG+AGG | + | chr4_3:54298579-54298598 | Msa0647950:intron | 25.0% |
!!! | TTTCTTTTGAGAAGATAAAG+CGG | + | chr4_3:54298918-54298937 | Msa0647950:intron | 25.0% |
!! | TGATTTTCATACAAAGGATT+AGG | - | chr4_3:54299500-54299519 | None:intergenic | 25.0% |
!! | TAAGTGTGATTTTCATACAA+AGG | - | chr4_3:54299506-54299525 | None:intergenic | 25.0% |
!! | TGATTTTCATACAAAGGATT+AGG | - | chr4_3:54299500-54299519 | None:intergenic | 25.0% |
!! | TTAGTGTGATTTTCATACAA+AGG | - | chr4_3:54299684-54299703 | None:intergenic | 25.0% |
!!! | TGCATTTTTAGGTTTTACTT+TGG | + | chr4_3:54299749-54299768 | Msa0647950:intron | 25.0% |
!!! | GCATTTTTAGGTTTTACTTT+GGG | + | chr4_3:54299750-54299769 | Msa0647950:intron | 25.0% |
!!! | CATTTTTAGGTTTTACTTTG+GGG | + | chr4_3:54299751-54299770 | Msa0647950:intron | 25.0% |
! | CATAATATAGTCATTGTACA+AGG | - | chr4_3:54299914-54299933 | None:intergenic | 25.0% |
!! | TTGATAATAGAACTGTTCAT+TGG | + | chr4_3:54300082-54300101 | Msa0647950:intron | 25.0% |
!! | TCATTGGAAATTCCTAATTT+TGG | + | chr4_3:54300098-54300117 | Msa0647950:intron | 25.0% |
! | AAGAAGAAATGGAAGAAATT+AGG | + | chr4_3:54300655-54300674 | Msa0647950:CDS | 25.0% |
! | AGAAGAAATGGAAGAAATTA+GGG | + | chr4_3:54300656-54300675 | Msa0647950:CDS | 25.0% |
!! | TCATAAACGAGTTTCTAAAA+AGG | + | chr4_3:54300699-54300718 | Msa0647950:exon | 25.0% |
! | TCATAAAAAGTTCTACTTTC+TGG | + | chr4_3:54300775-54300794 | Msa0647950:three_prime_UTR | 25.0% |
! | CCCATTTGTAATATTAGTAT+TGG | + | chr4_3:54300865-54300884 | Msa0647950:three_prime_UTR | 25.0% |
AAAGAAGAAGATATTGAAGG+TGG | + | chr4_3:54295676-54295695 | Msa0647950:five_prime_UTR | 30.0% | |
AAGAAGAAGATATTGAAGGT+GGG | + | chr4_3:54295677-54295696 | Msa0647950:five_prime_UTR | 30.0% | |
TGAAGATTAGATCTTACTGA+AGG | - | chr4_3:54295785-54295804 | None:intergenic | 30.0% | |
!!! | ATTTTGGGATCAGTGAAAAA+TGG | + | chr4_3:54295876-54295895 | Msa0647950:exon | 30.0% |
TGATTTAGATATTCAGAGAG+AGG | + | chr4_3:54296100-54296119 | Msa0647950:intron | 30.0% | |
AGTAAGGAGTTTAGATTAGA+TGG | + | chr4_3:54296441-54296460 | Msa0647950:intron | 30.0% | |
! | TAATGAGTTGGATCCAAATA+TGG | + | chr4_3:54296540-54296559 | Msa0647950:intron | 30.0% |
GAAAGACATTACATTGAATG+AGG | - | chr4_3:54296903-54296922 | None:intergenic | 30.0% | |
GTACAAACCAAAAATAGCAT+TGG | - | chr4_3:54297137-54297156 | None:intergenic | 30.0% | |
!!! | ATGCTATTTTTGGTTTGTAC+TGG | + | chr4_3:54297137-54297156 | Msa0647950:intron | 30.0% |
AAAAAAGAAGACTGCCTAAA+AGG | - | chr4_3:54297170-54297189 | None:intergenic | 30.0% | |
AAGGTTCGATAGAATAAAGT+AGG | + | chr4_3:54297197-54297216 | Msa0647950:intron | 30.0% | |
TGCATGTTTGATATCACAAT+GGG | - | chr4_3:54297545-54297564 | None:intergenic | 30.0% | |
TACCAGTTGTATGATAATTG+TGG | + | chr4_3:54297669-54297688 | Msa0647950:intron | 30.0% | |
!!! | TTTATAGGTTTTTGAGGTTG+AGG | + | chr4_3:54297861-54297880 | Msa0647950:intron | 30.0% |
!!! | TTATAGGTTTTTGAGGTTGA+GGG | + | chr4_3:54297862-54297881 | Msa0647950:intron | 30.0% |
! | AGCTAATTTTTATTAGCTCC+AGG | + | chr4_3:54298766-54298785 | Msa0647950:intron | 30.0% |
AGCCAAATAACAAACTTAAC+AGG | + | chr4_3:54299296-54299315 | Msa0647950:intron | 30.0% | |
!! | CTCCTGTTAAGTTTGTTATT+TGG | - | chr4_3:54299301-54299320 | None:intergenic | 30.0% |
CAAATAACAAACTTAACAGG+AGG | + | chr4_3:54299299-54299318 | Msa0647950:intron | 30.0% | |
AATGTATGTAAGAGTTAGAG+AGG | + | chr4_3:54299350-54299369 | Msa0647950:intron | 30.0% | |
CTGATATCAAGAAAGAGAAA+AGG | - | chr4_3:54299462-54299481 | None:intergenic | 30.0% | |
! | TTCATGAAATTGGAAGTATG+TGG | + | chr4_3:54299544-54299563 | Msa0647950:intron | 30.0% |
CAAATTAAAACAGGAAGAGA+GGG | + | chr4_3:54299813-54299832 | Msa0647950:intron | 30.0% | |
AAATTAAAACAGGAAGAGAG+GGG | + | chr4_3:54299814-54299833 | Msa0647950:intron | 30.0% | |
TAGTCATCATGAGATATTTG+AGG | + | chr4_3:54300049-54300068 | Msa0647950:intron | 30.0% | |
AATTAACTTCTATGACTACG+GGG | - | chr4_3:54300296-54300315 | None:intergenic | 30.0% | |
CAATTAACTTCTATGACTAC+GGG | - | chr4_3:54300297-54300316 | None:intergenic | 30.0% | |
GCAATTAACTTCTATGACTA+CGG | - | chr4_3:54300298-54300317 | None:intergenic | 30.0% | |
!! | TTGGTAATGTATTCTGTTTC+AGG | + | chr4_3:54300328-54300347 | Msa0647950:intron | 30.0% |
AAAGTCTTAACTGAATTAGC+TGG | + | chr4_3:54300440-54300459 | Msa0647950:CDS | 30.0% | |
AGTTCAATTTCCTGTTAACA+AGG | + | chr4_3:54300547-54300566 | Msa0647950:intron | 30.0% | |
TGGAATGCATTATTATTTGC+AGG | + | chr4_3:54300602-54300621 | Msa0647950:intron | 30.0% | |
!! | TGTTGATGATGAAGAAGAAA+TGG | + | chr4_3:54300644-54300663 | Msa0647950:CDS | 30.0% |
AAAAGGTGACTTATTACCAA+TGG | + | chr4_3:54300888-54300907 | Msa0647950:three_prime_UTR | 30.0% | |
!!! | ATGGGGATTTTTTGAAGGAT+TGG | - | chr4_3:54295839-54295858 | None:intergenic | 35.0% |
AACATTGAACGACAAATTCG+CGG | + | chr4_3:54295985-54296004 | Msa0647950:CDS | 35.0% | |
CTATTAAAGAAGCTGCTAAG+AGG | + | chr4_3:54296141-54296160 | Msa0647950:intron | 35.0% | |
ACCTATAGTAGAAAAGATCG+TGG | + | chr4_3:54296366-54296385 | Msa0647950:intron | 35.0% | |
! | TCCACGATCTTTTCTACTAT+AGG | - | chr4_3:54296370-54296389 | None:intergenic | 35.0% |
! | GACGTGTAGATTTTGTAGTA+AGG | + | chr4_3:54296425-54296444 | Msa0647950:intron | 35.0% |
AAGGAGTTTAGATTAGATGG+AGG | + | chr4_3:54296444-54296463 | Msa0647950:intron | 35.0% | |
CTTATCTCATTAAGTGGGAT+AGG | - | chr4_3:54296603-54296622 | None:intergenic | 35.0% | |
CTATCCCACTTAATGAGATA+AGG | + | chr4_3:54296601-54296620 | Msa0647950:intron | 35.0% | |
! | CAAGCCTTATCTCATTAAGT+GGG | - | chr4_3:54296608-54296627 | None:intergenic | 35.0% |
GTTTCAAAAGGCTAGAAGTT+TGG | - | chr4_3:54296857-54296876 | None:intergenic | 35.0% | |
!!! | TTCTAGCCTTTTGAAACAAC+AGG | + | chr4_3:54296860-54296879 | Msa0647950:intron | 35.0% |
ATGTCTTTCTGCTGAATGTA+AGG | + | chr4_3:54296914-54296933 | Msa0647950:intron | 35.0% | |
! | TACCCAATTGAAGGCATATT+CGG | + | chr4_3:54297008-54297027 | Msa0647950:intron | 35.0% |
AACTCAATATCAATGCACCT+TGG | + | chr4_3:54297350-54297369 | Msa0647950:intron | 35.0% | |
ACACACTAAGAGGACAATTA+AGG | - | chr4_3:54297412-54297431 | None:intergenic | 35.0% | |
TTAGTGTGTGTTGGATATCA+TGG | + | chr4_3:54297423-54297442 | Msa0647950:intron | 35.0% | |
GTGCATGTTTGATATCACAA+TGG | - | chr4_3:54297546-54297565 | None:intergenic | 35.0% | |
! | GCACAACTTTTGACAAATCA+CGG | + | chr4_3:54297562-54297581 | Msa0647950:intron | 35.0% |
AGCCACAATTATCATACAAC+TGG | - | chr4_3:54297674-54297693 | None:intergenic | 35.0% | |
TCTAAACATGTGCTATACCT+TGG | + | chr4_3:54297962-54297981 | Msa0647950:intron | 35.0% | |
CTAAACATGTGCTATACCTT+GGG | + | chr4_3:54297963-54297982 | Msa0647950:intron | 35.0% | |
CTAAAAGAGACCAAACAAGA+GGG | + | chr4_3:54298018-54298037 | Msa0647950:intron | 35.0% | |
TAAAAGAGACCAAACAAGAG+GGG | + | chr4_3:54298019-54298038 | Msa0647950:intron | 35.0% | |
GATCTTAACATGCTATAGCT+AGG | + | chr4_3:54298159-54298178 | Msa0647950:intron | 35.0% | |
TGTGCACTTAACATGATCAA+TGG | + | chr4_3:54298356-54298375 | Msa0647950:intron | 35.0% | |
ATGACTAAGGAATGAATGAC+TGG | - | chr4_3:54298466-54298485 | None:intergenic | 35.0% | |
AGTCATTCATTCCTTAGTCA+TGG | + | chr4_3:54298465-54298484 | Msa0647950:intron | 35.0% | |
GTCATTCATTCCTTAGTCAT+GGG | + | chr4_3:54298466-54298485 | Msa0647950:intron | 35.0% | |
AGAAAAAGAGAAAGCGAGTT+AGG | + | chr4_3:54298527-54298546 | Msa0647950:intron | 35.0% | |
CGAGTTAGGAAAGATTCTAA+AGG | + | chr4_3:54298541-54298560 | Msa0647950:intron | 35.0% | |
!! | ATTTTATTCACGAGGCATTC+TGG | + | chr4_3:54298587-54298606 | Msa0647950:intron | 35.0% |
!! | TTTTATTCACGAGGCATTCT+GGG | + | chr4_3:54298588-54298607 | Msa0647950:intron | 35.0% |
TCAGGCGTATATATTAGTGT+TGG | + | chr4_3:54298687-54298706 | Msa0647950:intron | 35.0% | |
!! | TTGGTGCTTATGCATGTTTT+TGG | + | chr4_3:54298706-54298725 | Msa0647950:intron | 35.0% |
! | TGGTGCTTATGCATGTTTTT+GGG | + | chr4_3:54298707-54298726 | Msa0647950:intron | 35.0% |
! | AATAGCTTGTAAGAAGCTCA+TGG | + | chr4_3:54298789-54298808 | Msa0647950:intron | 35.0% |
!!! | TTGCCCTTTTTTTACAATGG+CGG | + | chr4_3:54299070-54299089 | Msa0647950:intron | 35.0% |
TAGCCGCCATTGTAAAAAAA+GGG | - | chr4_3:54299076-54299095 | None:intergenic | 35.0% | |
ATAGCCGCCATTGTAAAAAA+AGG | - | chr4_3:54299077-54299096 | None:intergenic | 35.0% | |
GTCATTCTATGGTGTAATCT+TGG | - | chr4_3:54299134-54299153 | None:intergenic | 35.0% | |
ACCATAGAATGACATTGACA+AGG | + | chr4_3:54299141-54299160 | Msa0647950:intron | 35.0% | |
CCATAGAATGACATTGACAA+GGG | + | chr4_3:54299142-54299161 | Msa0647950:intron | 35.0% | |
CATAACTGAACTTGACTAGT+AGG | + | chr4_3:54299206-54299225 | Msa0647950:intron | 35.0% | |
GTAGGTAAGAAACCTTTGAT+AGG | + | chr4_3:54299224-54299243 | Msa0647950:intron | 35.0% | |
ACTTATTCTCTTCTTGACTG+TGG | - | chr4_3:54299253-54299272 | None:intergenic | 35.0% | |
AGAAGAGAATAAGTCAGCAA+AGG | + | chr4_3:54299259-54299278 | Msa0647950:intron | 35.0% | |
GAAGAGAATAAGTCAGCAAA+GGG | + | chr4_3:54299260-54299279 | Msa0647950:intron | 35.0% | |
AAGAGAATAAGTCAGCAAAG+GGG | + | chr4_3:54299261-54299280 | Msa0647950:intron | 35.0% | |
TTAACAGGAGGTAATAGTTG+TGG | + | chr4_3:54299311-54299330 | Msa0647950:intron | 35.0% | |
TAACAGGAGGTAATAGTTGT+GGG | + | chr4_3:54299312-54299331 | Msa0647950:intron | 35.0% | |
GTAAGAGTTAGAGAGGAAAT+TGG | + | chr4_3:54299357-54299376 | Msa0647950:intron | 35.0% | |
GATCTCGAAATAACTAGCAA+AGG | + | chr4_3:54299406-54299425 | Msa0647950:intron | 35.0% | |
TTTAATTGACACCTCCTTTG+TGG | + | chr4_3:54299726-54299745 | Msa0647950:intron | 35.0% | |
AACCTAAAAATGCACCACAA+AGG | - | chr4_3:54299743-54299762 | None:intergenic | 35.0% | |
! | GGGGATAAAATTTTACTGAG+CGG | + | chr4_3:54299770-54299789 | Msa0647950:intron | 35.0% |
!!! | CCTCTCTTCCTGTTTTAATT+TGG | - | chr4_3:54299815-54299834 | None:intergenic | 35.0% |
CCAAATTAAAACAGGAAGAG+AGG | + | chr4_3:54299812-54299831 | Msa0647950:intron | 35.0% | |
CTCATGATGACTAATTGCAA+AGG | - | chr4_3:54300042-54300061 | None:intergenic | 35.0% | |
ATTGACAAGCTTCATAACCT+CGG | - | chr4_3:54300172-54300191 | None:intergenic | 35.0% | |
TAATGTATTCTGTTTCAGGC+AGG | + | chr4_3:54300332-54300351 | Msa0647950:intron | 35.0% | |
CTCTCAAGTCACACTAATTA+TGG | + | chr4_3:54300582-54300601 | Msa0647950:intron | 35.0% | |
CATATTAGCTATGTTGCCAT+TGG | - | chr4_3:54300907-54300926 | None:intergenic | 35.0% | |
GGATCAGTGAAAAATGGAGA+AGG | + | chr4_3:54295882-54295901 | Msa0647950:exon | 40.0% | |
! | AACTGTTGCGGATTTGGTTT+CGG | - | chr4_3:54295925-54295944 | None:intergenic | 40.0% |
CAATCTCGCAATAACTGTTG+CGG | - | chr4_3:54295937-54295956 | None:intergenic | 40.0% | |
!! | GAATGACATTGGTTCTGCAA+AGG | + | chr4_3:54296163-54296182 | Msa0647950:intron | 40.0% |
CGTTGGATGTGTTGTAATAC+TGG | + | chr4_3:54296295-54296314 | Msa0647950:intron | 40.0% | |
AGATCGTGGAAGTTATGCTT+AGG | + | chr4_3:54296380-54296399 | Msa0647950:intron | 40.0% | |
! | CCAAGCCTTATCTCATTAAG+TGG | - | chr4_3:54296609-54296628 | None:intergenic | 40.0% |
CCACTTAATGAGATAAGGCT+TGG | + | chr4_3:54296606-54296625 | Msa0647950:intron | 40.0% | |
! | AATCACATGTGTCGATGTGT+CGG | + | chr4_3:54296639-54296658 | Msa0647950:intron | 40.0% |
!! | CCAACACCTGTTGTTTCAAA+AGG | - | chr4_3:54296869-54296888 | None:intergenic | 40.0% |
!!! | CCTTTTGAAACAACAGGTGT+TGG | + | chr4_3:54296866-54296885 | Msa0647950:intron | 40.0% |
TCTTTCTGCTGAATGTAAGG+TGG | + | chr4_3:54296917-54296936 | Msa0647950:intron | 40.0% | |
TGCTGAATGTAAGGTGGAAT+AGG | + | chr4_3:54296923-54296942 | Msa0647950:intron | 40.0% | |
GTGATCGGTCTTAACATGTA+TGG | - | chr4_3:54296983-54297002 | None:intergenic | 40.0% | |
GAATATGCCTTCAATTGGGT+AGG | - | chr4_3:54297009-54297028 | None:intergenic | 40.0% | |
CACCGAATATGCCTTCAATT+GGG | - | chr4_3:54297013-54297032 | None:intergenic | 40.0% | |
ACACCGAATATGCCTTCAAT+TGG | - | chr4_3:54297014-54297033 | None:intergenic | 40.0% | |
!! | GTACTGGTGTATCACCTTTT+AGG | + | chr4_3:54297153-54297172 | Msa0647950:intron | 40.0% |
CTACAGAACTTGTGAGATCT+AGG | + | chr4_3:54297288-54297307 | Msa0647950:intron | 40.0% | |
GAACCGTCTGCATGAAAATA+AGG | + | chr4_3:54297319-54297338 | Msa0647950:intron | 40.0% | |
!!! | GTGCCTTATTTTCATGCAGA+CGG | - | chr4_3:54297325-54297344 | None:intergenic | 40.0% |
!!! | GAGAAAGTGTTGGTAGGTTT+TGG | + | chr4_3:54297372-54297391 | Msa0647950:intron | 40.0% |
ATTGTCCTCTTAGTGTGTGT+TGG | + | chr4_3:54297414-54297433 | Msa0647950:intron | 40.0% | |
GATATCCAACACACACTAAG+AGG | - | chr4_3:54297422-54297441 | None:intergenic | 40.0% | |
AACTACGCTTTGTGCATGTT+TGG | + | chr4_3:54297488-54297507 | Msa0647950:intron | 40.0% | |
!! | CAATGGGTTTGCTAGAATCA+CGG | - | chr4_3:54297529-54297548 | None:intergenic | 40.0% |
! | CAACTTTTGACAAATCACGG+TGG | + | chr4_3:54297565-54297584 | Msa0647950:intron | 40.0% |
AGTATGTTTGGTATCGCAGT+GGG | - | chr4_3:54297611-54297630 | None:intergenic | 40.0% | |
ATGAAGCACAAGAGCTAACT+TGG | - | chr4_3:54297650-54297669 | None:intergenic | 40.0% | |
ATTCCACTTAGTCAACTGGA+GGG | - | chr4_3:54297726-54297745 | None:intergenic | 40.0% | |
TATTCCACTTAGTCAACTGG+AGG | - | chr4_3:54297727-54297746 | None:intergenic | 40.0% | |
TCCAGTTGACTAAGTGGAAT+AGG | + | chr4_3:54297726-54297745 | Msa0647950:intron | 40.0% | |
ACCTATTCCACTTAGTCAAC+TGG | - | chr4_3:54297730-54297749 | None:intergenic | 40.0% | |
TATACCTTGGGACAGGAAAA+GGG | + | chr4_3:54297975-54297994 | Msa0647950:intron | 40.0% | |
GCTAAAAGAGACCAAACAAG+AGG | + | chr4_3:54298017-54298036 | Msa0647950:intron | 40.0% | |
AACTGACTGTGATGTCTGTA+TGG | + | chr4_3:54298091-54298110 | Msa0647950:intron | 40.0% | |
!! | GTGCACACAATCTTTAGGAT+AGG | + | chr4_3:54298137-54298156 | Msa0647950:intron | 40.0% |
TAACATGCTATAGCTAGGAC+AGG | + | chr4_3:54298164-54298183 | Msa0647950:intron | 40.0% | |
AGAAGCAAAAGAGGAACAAC+AGG | + | chr4_3:54298206-54298225 | Msa0647950:intron | 40.0% | |
ACTTAGCTAGGAACAGGAAA+AGG | + | chr4_3:54298285-54298304 | Msa0647950:intron | 40.0% | |
CTTAGCTAGGAACAGGAAAA+GGG | + | chr4_3:54298286-54298305 | Msa0647950:intron | 40.0% | |
GAAAAGGGTCTTAGCAAAAG+AGG | + | chr4_3:54298301-54298320 | Msa0647950:intron | 40.0% | |
CAAAAAGAGACCAACCTAGA+GGG | + | chr4_3:54298329-54298348 | Msa0647950:intron | 40.0% | |
AAAAAGAGACCAACCTAGAG+GGG | + | chr4_3:54298330-54298349 | Msa0647950:intron | 40.0% | |
! | TTCTAAAGACTGAGCTTCTG+AGG | + | chr4_3:54298500-54298519 | Msa0647950:intron | 40.0% |
! | TAGCTTGTACAGGTCCATTT+GGG | + | chr4_3:54298644-54298663 | Msa0647950:intron | 40.0% |
!! | GGTGCTTATGCATGTTTTTG+GGG | + | chr4_3:54298708-54298727 | Msa0647950:intron | 40.0% |
!!! | GTGCTTATGCATGTTTTTGG+GGG | + | chr4_3:54298709-54298728 | Msa0647950:intron | 40.0% |
! | GGGGAGCTTATTGAAAGTAT+TGG | + | chr4_3:54298728-54298747 | Msa0647950:intron | 40.0% |
AGCTTCTTACAAGCTATTCC+TGG | - | chr4_3:54298787-54298806 | None:intergenic | 40.0% | |
GCAGACTAAACAATTCCTAG+AGG | - | chr4_3:54298861-54298880 | None:intergenic | 40.0% | |
CTAGGAATTGTTTAGTCTGC+AGG | + | chr4_3:54298861-54298880 | Msa0647950:intron | 40.0% | |
TTTACAATGGCGGCTATACA+GGG | + | chr4_3:54298972-54298991 | Msa0647950:intron | 40.0% | |
CGTACAATACACCAAATGGT+GGG | + | chr4_3:54299003-54299022 | Msa0647950:intron | 40.0% | |
!!! | GGGTTGCCCTTTTTTTACAA+TGG | + | chr4_3:54299067-54299086 | Msa0647950:intron | 40.0% |
! | TTTTACAATGGCGGCTATAG+TGG | + | chr4_3:54299079-54299098 | Msa0647950:intron | 40.0% |
CCCTTGTCAATGTCATTCTA+TGG | - | chr4_3:54299145-54299164 | None:intergenic | 40.0% | |
! | GAGAGGAAATTGGAAGTATG+TGG | + | chr4_3:54299367-54299386 | Msa0647950:intron | 40.0% |
TATGTGGTCATGTAGAGACT+AGG | + | chr4_3:54299383-54299402 | Msa0647950:intron | 40.0% | |
ATGTGGTCATGTAGAGACTA+GGG | + | chr4_3:54299384-54299403 | Msa0647950:intron | 40.0% | |
GGATCTCGAAATAACTAGCA+AGG | + | chr4_3:54299405-54299424 | Msa0647950:intron | 40.0% | |
TATGTGGTCATGTAGAGACT+AGG | + | chr4_3:54299383-54299402 | Msa0647950:intron | 40.0% | |
ATGTGGTCATGTAGAGACTA+GGG | + | chr4_3:54299384-54299403 | Msa0647950:intron | 40.0% | |
CTAAAAATGCACCACAAAGG+AGG | - | chr4_3:54299740-54299759 | None:intergenic | 40.0% | |
! | CTCCTTTGTGGTGCATTTTT+AGG | + | chr4_3:54299738-54299757 | Msa0647950:intron | 40.0% |
AGTGAGGGCCAAATTAAAAC+AGG | + | chr4_3:54299804-54299823 | Msa0647950:intron | 40.0% | |
TGGCTAAGTCATGCATTGTT+TGG | + | chr4_3:54299857-54299876 | Msa0647950:intron | 40.0% | |
CTGAAAAGGCAGCCAAAATT+AGG | - | chr4_3:54300113-54300132 | None:intergenic | 40.0% | |
AGTACGAGCAATTGCTGAAA+AGG | - | chr4_3:54300127-54300146 | None:intergenic | 40.0% | |
GCTTGTCAATAACCTCATGA+AGG | + | chr4_3:54300182-54300201 | Msa0647950:CDS | 40.0% | |
GTTCAGCAAAGAAATGACCA+AGG | + | chr4_3:54300233-54300252 | Msa0647950:CDS | 40.0% | |
! | TGAAGTATGAAGGCATACCT+TGG | - | chr4_3:54300253-54300272 | None:intergenic | 40.0% |
GCAGGAGAAATGAAGTATGA+AGG | - | chr4_3:54300263-54300282 | None:intergenic | 40.0% | |
TGACTCAGCATTAGATTCTG+AGG | + | chr4_3:54300385-54300404 | Msa0647950:CDS | 40.0% | |
!! | TTTTGTTTCCTCACAGCTTC+AGG | - | chr4_3:54300485-54300504 | None:intergenic | 40.0% |
TGAAGCTGTGAGGAAACAAA+AGG | + | chr4_3:54300484-54300503 | Msa0647950:CDS | 40.0% | |
!! | GCAAAAAGAGCCTTGTTAAC+AGG | - | chr4_3:54300560-54300579 | None:intergenic | 40.0% |
TTCTTCATCATCAACACCCT+CGG | - | chr4_3:54300640-54300659 | None:intergenic | 40.0% | |
CGCAATAACTGTTGCGGATT+TGG | - | chr4_3:54295931-54295950 | None:intergenic | 45.0% | |
CGCAACAGTTATTGCGAGAT+TGG | + | chr4_3:54295935-54295954 | Msa0647950:CDS | 45.0% | |
GCTGCTAAGAGGAATGACAT+TGG | + | chr4_3:54296152-54296171 | Msa0647950:intron | 45.0% | |
TCTGTCACTGACACCAGATA+CGG | + | chr4_3:54296211-54296230 | Msa0647950:intron | 45.0% | |
TGGAGATGAGAAAGTTGCGT+TGG | + | chr4_3:54296278-54296297 | Msa0647950:intron | 45.0% | |
CGACATTAGAGAGAGAGATC+AGG | + | chr4_3:54296339-54296358 | Msa0647950:intron | 45.0% | |
TCGTGGAAGTTATGCTTAGG+TGG | + | chr4_3:54296383-54296402 | Msa0647950:intron | 45.0% | |
GAGGATAGTCAGATCACTAG+AGG | + | chr4_3:54296463-54296482 | Msa0647950:intron | 45.0% | |
! | GCACTGACAGTTCTAATCGA+AGG | - | chr4_3:54296714-54296733 | None:intergenic | 45.0% |
CAATTGGGTAGGACTGTGAT+CGG | - | chr4_3:54296998-54297017 | None:intergenic | 45.0% | |
TCACAGTCCTACCCAATTGA+AGG | + | chr4_3:54296999-54297018 | Msa0647950:intron | 45.0% | |
!! | CATATTCGGTGTCAGACATG+TGG | + | chr4_3:54297022-54297041 | Msa0647950:intron | 45.0% |
GCTCTGACACACACAAAAAC+AGG | - | chr4_3:54297107-54297126 | None:intergenic | 45.0% | |
! | ATGCACCTTGGAGAAAGTGT+TGG | + | chr4_3:54297362-54297381 | Msa0647950:intron | 45.0% |
!! | ACCTTGGAGAAAGTGTTGGT+AGG | + | chr4_3:54297366-54297385 | Msa0647950:intron | 45.0% |
ACCTACCAACACTTTCTCCA+AGG | - | chr4_3:54297370-54297389 | None:intergenic | 45.0% | |
GTGTGTGTTGGATATCATGG+TGG | + | chr4_3:54297426-54297445 | Msa0647950:intron | 45.0% | |
!! | TGGTGGATTTGCCAGAATCA+CGG | + | chr4_3:54297443-54297462 | Msa0647950:intron | 45.0% |
ACAATGGCAATCCGTGATTC+TGG | - | chr4_3:54297457-54297476 | None:intergenic | 45.0% | |
GTGCATGTTTGGTATCACAG+TGG | + | chr4_3:54297499-54297518 | Msa0647950:intron | 45.0% | |
GAGTATGTTTGGTATCGCAG+TGG | - | chr4_3:54297612-54297631 | None:intergenic | 45.0% | |
AGAGACTGTGTGCAAAGAGT+GGG | - | chr4_3:54297932-54297951 | None:intergenic | 45.0% | |
TAGAGACTGTGTGCAAAGAG+TGG | - | chr4_3:54297933-54297952 | None:intergenic | 45.0% | |
ACTCTTTGCACACAGTCTCT+AGG | + | chr4_3:54297932-54297951 | Msa0647950:intron | 45.0% | |
!! | TTGCACACAGTCTCTAGGAT+AGG | + | chr4_3:54297937-54297956 | Msa0647950:intron | 45.0% |
CTATACCTTGGGACAGGAAA+AGG | + | chr4_3:54297974-54297993 | Msa0647950:intron | 45.0% | |
GAAAAGGGTCTTAGCGAAAG+AGG | + | chr4_3:54297990-54298009 | Msa0647950:intron | 45.0% | |
CTAAAGATTGTGTGCACGAG+TGG | - | chr4_3:54298134-54298153 | None:intergenic | 45.0% | |
CACTCGTGCACACAATCTTT+AGG | + | chr4_3:54298132-54298151 | Msa0647950:intron | 45.0% | |
GCTATAGCTAGGACAGGAAA+AGG | + | chr4_3:54298170-54298189 | Msa0647950:intron | 45.0% | |
! | ACAGGAAAAGGTGCAGCAAA+AGG | + | chr4_3:54298182-54298201 | Msa0647950:intron | 45.0% |
! | CAGGAAAAGGTGCAGCAAAA+GGG | + | chr4_3:54298183-54298202 | Msa0647950:intron | 45.0% |
GCAAAAGGGAGAAGCAAAAG+AGG | + | chr4_3:54298197-54298216 | Msa0647950:intron | 45.0% | |
AAGAGGAACAACAGGCAGAT+AGG | + | chr4_3:54298214-54298233 | Msa0647950:intron | 45.0% | |
GCTTAGCAGGTAGAGCAAAA+AGG | + | chr4_3:54298241-54298260 | Msa0647950:intron | 45.0% | |
AGCAAAAAGGACCAACCTAG+AGG | + | chr4_3:54298254-54298273 | Msa0647950:intron | 45.0% | |
GCAAAAAGAGACCAACCTAG+AGG | + | chr4_3:54298328-54298347 | Msa0647950:intron | 45.0% | |
ACCAATCTCCAGCTCGTATA+TGG | + | chr4_3:54298411-54298430 | Msa0647950:intron | 45.0% | |
CCAATCTCCAGCTCGTATAT+GGG | + | chr4_3:54298412-54298431 | Msa0647950:intron | 45.0% | |
CAATCTCCAGCTCGTATATG+GGG | + | chr4_3:54298413-54298432 | Msa0647950:intron | 45.0% | |
! | GAGGCATTCTGGGTTCATTT+GGG | + | chr4_3:54298598-54298617 | Msa0647950:intron | 45.0% |
CATTCTGGGTTCATTTGGGT+TGG | + | chr4_3:54298602-54298621 | Msa0647950:intron | 45.0% | |
! | AGCTACTCATGGACTACTCA+TGG | - | chr4_3:54298629-54298648 | None:intergenic | 45.0% |
! | AGTCCATGAGTAGCTTGTAC+AGG | + | chr4_3:54298634-54298653 | Msa0647950:intron | 45.0% |
! | GTAGCTTGTACAGGTCCATT+TGG | + | chr4_3:54298643-54298662 | Msa0647950:intron | 45.0% |
TTGTACAGGTCCATTTGGGT+TGG | + | chr4_3:54298648-54298667 | Msa0647950:intron | 45.0% | |
TACTCATGGACCAACCCAAA+TGG | - | chr4_3:54298615-54298634 | None:intergenic | 45.0% | |
GGTCCATGAGTAGCTTATTC+AGG | + | chr4_3:54298669-54298688 | Msa0647950:intron | 45.0% | |
ACGCCTGAATAAGCTACTCA+TGG | - | chr4_3:54298675-54298694 | None:intergenic | 45.0% | |
CGTGCTCATCATGTGTAGTT+AGG | - | chr4_3:54298837-54298856 | None:intergenic | 45.0% | |
CTTTACAATGGCGGCTATAC+AGG | + | chr4_3:54298971-54298990 | Msa0647950:intron | 45.0% | |
GCTGCGTACAATACACCAAA+TGG | + | chr4_3:54298999-54299018 | Msa0647950:intron | 45.0% | |
GCGTACAATACACCAAATGG+TGG | + | chr4_3:54299002-54299021 | Msa0647950:intron | 45.0% | |
! | ATGGCGGCTATAGTGGTTTT+TGG | + | chr4_3:54299086-54299105 | Msa0647950:intron | 45.0% |
! | TGGCGGCTATAGTGGTTTTT+GGG | + | chr4_3:54299087-54299106 | Msa0647950:intron | 45.0% |
!!! | GCTATAGTGGTTTTTGGGTC+TGG | + | chr4_3:54299092-54299111 | Msa0647950:intron | 45.0% |
CATTGACAAGGGTTGCTGTA+TGG | + | chr4_3:54299153-54299172 | Msa0647950:intron | 45.0% | |
TGACTGTGGAAGCCTATCAA+AGG | - | chr4_3:54299239-54299258 | None:intergenic | 45.0% | |
AATAAGTCAGCAAAGGGGCA+GGG | + | chr4_3:54299266-54299285 | Msa0647950:intron | 45.0% | |
GTAATAGTTGTGGGTAGCAG+AGG | + | chr4_3:54299321-54299340 | Msa0647950:intron | 45.0% | |
AGCGGTTTACAAGTCAAGTG+AGG | + | chr4_3:54299788-54299807 | Msa0647950:intron | 45.0% | |
GCGGTTTACAAGTCAAGTGA+GGG | + | chr4_3:54299789-54299808 | Msa0647950:intron | 45.0% | |
AAAACAGGAAGAGAGGGGAA+AGG | + | chr4_3:54299819-54299838 | Msa0647950:intron | 45.0% | |
AAACAGGAAGAGAGGGGAAA+GGG | + | chr4_3:54299820-54299839 | Msa0647950:intron | 45.0% | |
TTCAGCAATTGCTCGTACTG+TGG | + | chr4_3:54300128-54300147 | Msa0647950:intron | 45.0% | |
TCAGCAATTGCTCGTACTGT+GGG | + | chr4_3:54300129-54300148 | Msa0647950:intron | 45.0% | |
!! | ACATCTATCAAAGAGTGCCG+AGG | + | chr4_3:54300152-54300171 | Msa0647950:CDS | 45.0% |
TGCATAGCAACAGCCATTTC+AGG | - | chr4_3:54300210-54300229 | None:intergenic | 45.0% | |
GTTTCAGGCAGGAGTAATTG+AGG | + | chr4_3:54300343-54300362 | Msa0647950:intron | 45.0% | |
TATATCAGGGCACAATGCAG+AGG | - | chr4_3:54300814-54300833 | None:intergenic | 45.0% | |
!! | TTATATATACAAAATAAAAT+GGG | - | chr4_3:54295857-54295876 | None:intergenic | 5.0% |
!! | ATTATATATACAAAATAAAA+TGG | - | chr4_3:54295858-54295877 | None:intergenic | 5.0% |
!!! | TTATTTTGTATATATAATTT+TGG | + | chr4_3:54295860-54295879 | Msa0647950:five_prime_UTR | 5.0% |
!!! | TATTTTGTATATATAATTTT+GGG | + | chr4_3:54295861-54295880 | Msa0647950:five_prime_UTR | 5.0% |
! | AGGTGGGTGTGTTGTTCGTA+AGG | + | chr4_3:54295693-54295712 | Msa0647950:five_prime_UTR | 50.0% |
! | GACAGTTCTAATCGAAGGCG+TGG | - | chr4_3:54296709-54296728 | None:intergenic | 50.0% |
CAACACTAACACGTCAACGC+TGG | - | chr4_3:54297081-54297100 | None:intergenic | 50.0% | |
! | ACGGTGGCTCACTGTGATTT+TGG | + | chr4_3:54297581-54297600 | Msa0647950:intron | 50.0% |
ACTCCCTCCAGTTGACTAAG+TGG | + | chr4_3:54297720-54297739 | Msa0647950:intron | 50.0% | |
CATGTGCTATACCTTGGGAC+AGG | + | chr4_3:54297968-54297987 | Msa0647950:intron | 50.0% | |
! | AAGACCCTTTTCCTGTCCCA+AGG | - | chr4_3:54297982-54298001 | None:intergenic | 50.0% |
AGGGTCTTAGCGAAAGAGGT+AGG | + | chr4_3:54297994-54298013 | Msa0647950:intron | 50.0% | |
GGGTCTTAGCGAAAGAGGTA+GGG | + | chr4_3:54297995-54298014 | Msa0647950:intron | 50.0% | |
GCAGATAGGAAGAGCTTAGC+AGG | + | chr4_3:54298228-54298247 | Msa0647950:intron | 50.0% | |
GTGTGCACTTAGCTAGGAAC+AGG | + | chr4_3:54298279-54298298 | Msa0647950:intron | 50.0% | |
CCCATATACGAGCTGGAGAT+TGG | - | chr4_3:54298415-54298434 | None:intergenic | 50.0% | |
TCCAGCTCGTATATGGGGAA+GGG | + | chr4_3:54298418-54298437 | Msa0647950:intron | 50.0% | |
TCGTATATGGGGAAGGGGAA+TGG | + | chr4_3:54298424-54298443 | Msa0647950:intron | 50.0% | |
CGTATATGGGGAAGGGGAAT+GGG | + | chr4_3:54298425-54298444 | Msa0647950:intron | 50.0% | |
GTATATGGGGAAGGGGAATG+GGG | + | chr4_3:54298426-54298445 | Msa0647950:intron | 50.0% | |
CAGATGCTCACCCATGACTA+AGG | - | chr4_3:54298479-54298498 | None:intergenic | 50.0% | |
! | CGAGGCATTCTGGGTTCATT+TGG | + | chr4_3:54298597-54298616 | Msa0647950:intron | 50.0% |
GGACCTGTACAAGCTACTCA+TGG | - | chr4_3:54298640-54298659 | None:intergenic | 50.0% | |
ACATGATGAGCACGACCTCT+AGG | + | chr4_3:54298843-54298862 | Msa0647950:intron | 50.0% | |
AATGGCGGCTATACAGGGTA+AGG | + | chr4_3:54298977-54298996 | Msa0647950:intron | 50.0% | |
TTAGAGCTCCCGCATATGCA+GGG | - | chr4_3:54299042-54299061 | None:intergenic | 50.0% | |
ATTAGAGCTCCCGCATATGC+AGG | - | chr4_3:54299043-54299062 | None:intergenic | 50.0% | |
! | TATGCGGGAGCTCTAATGCA+CGG | + | chr4_3:54299046-54299065 | Msa0647950:intron | 50.0% |
GAATAAGTCAGCAAAGGGGC+AGG | + | chr4_3:54299265-54299284 | Msa0647950:intron | 50.0% | |
CCATTTCAGGAGCCTTCATG+AGG | - | chr4_3:54300197-54300216 | None:intergenic | 50.0% | |
CCTCATGAAGGCTCCTGAAA+TGG | + | chr4_3:54300194-54300213 | Msa0647950:CDS | 50.0% | |
ACTTCTATGACTACGGGGAG+AGG | - | chr4_3:54300291-54300310 | None:intergenic | 50.0% | |
CCTCACAGCTTCAGGAAGTT+GGG | - | chr4_3:54300477-54300496 | None:intergenic | 50.0% | |
TCCTCACAGCTTCAGGAAGT+TGG | - | chr4_3:54300478-54300497 | None:intergenic | 50.0% | |
AACTGCATGTACCTCCTCTG+CGG | - | chr4_3:54300531-54300550 | None:intergenic | 50.0% | |
CAGGAAGATGCTATAGCCGA+GGG | + | chr4_3:54300621-54300640 | Msa0647950:intron | 50.0% | |
TGACCTGACTTTAGCGAGTC+TGG | - | chr4_3:54300682-54300701 | None:intergenic | 50.0% | |
GTGAGTGTCAGTGCCGTATC+TGG | - | chr4_3:54296227-54296246 | None:intergenic | 55.0% | |
! | GTTCTAATCGAAGGCGTGGC+TGG | - | chr4_3:54296705-54296724 | None:intergenic | 55.0% |
TCGCAGAAGCCCCTCTTGTT+TGG | - | chr4_3:54298031-54298050 | None:intergenic | 55.0% | |
GGGGCTTCTGCGACTTTCTA+CGG | + | chr4_3:54298038-54298057 | Msa0647950:intron | 55.0% | |
AGTGCACACAGCCTCTAGGT+TGG | - | chr4_3:54298268-54298287 | None:intergenic | 55.0% | |
GCTAAGTGCACACAGCCTCT+AGG | - | chr4_3:54298272-54298291 | None:intergenic | 55.0% | |
GAGGCTGTGTGCACTTAGCT+AGG | + | chr4_3:54298273-54298292 | Msa0647950:intron | 55.0% | |
TAAGTGCACACAGCCCCTCT+AGG | - | chr4_3:54298346-54298365 | None:intergenic | 55.0% | |
CTCCAGCTCGTATATGGGGA+AGG | + | chr4_3:54298417-54298436 | Msa0647950:intron | 55.0% | |
CCAGCTCGTATATGGGGAAG+GGG | + | chr4_3:54298419-54298438 | Msa0647950:intron | 55.0% | |
! | ATGCGGGAGCTCTAATGCAC+GGG | + | chr4_3:54299047-54299066 | Msa0647950:intron | 55.0% |
!! | AAGAGAGGGGAAAGGGTGCT+TGG | + | chr4_3:54299827-54299846 | Msa0647950:intron | 55.0% |
!! | AGAGAGGGGAAAGGGTGCTT+GGG | + | chr4_3:54299828-54299847 | Msa0647950:intron | 55.0% |
!! | AAAGGGTGCTTGGGGGTAAC+TGG | + | chr4_3:54299837-54299856 | Msa0647950:intron | 55.0% |
CACAGCTTCAGGAAGTTGGG+CGG | - | chr4_3:54300474-54300493 | None:intergenic | 55.0% | |
CCCAACTTCCTGAAGCTGTG+AGG | + | chr4_3:54300474-54300493 | Msa0647950:CDS | 55.0% | |
GCAGGAAGATGCTATAGCCG+AGG | + | chr4_3:54300620-54300639 | Msa0647950:intron | 55.0% | |
TGCACACAGCCCCTCTAGGT+TGG | - | chr4_3:54298342-54298361 | None:intergenic | 60.0% | |
CCCCTTCCCCATATACGAGC+TGG | - | chr4_3:54298422-54298441 | None:intergenic | 60.0% | |
! | CAAATGGTGGGACCCCTTCC+CGG | + | chr4_3:54299015-54299034 | Msa0647950:intron | 60.0% |
CATATGCAGGGTCCGGGAAG+GGG | - | chr4_3:54299030-54299049 | None:intergenic | 60.0% | |
GCATATGCAGGGTCCGGGAA+GGG | - | chr4_3:54299031-54299050 | None:intergenic | 60.0% | |
CTTCCCGGACCCTGCATATG+CGG | + | chr4_3:54299030-54299049 | Msa0647950:intron | 60.0% | |
TTCCCGGACCCTGCATATGC+GGG | + | chr4_3:54299031-54299050 | Msa0647950:intron | 60.0% | |
!! | GAGAGGGGAAAGGGTGCTTG+GGG | + | chr4_3:54299829-54299848 | Msa0647950:intron | 60.0% |
!! | AGAGGGGAAAGGGTGCTTGG+GGG | + | chr4_3:54299830-54299849 | Msa0647950:intron | 60.0% |
!! | ACCTGCTCAAAGTGCCGCAG+AGG | + | chr4_3:54300514-54300533 | Msa0647950:CDS | 60.0% |
TCCTCTGCGGCACTTTGAGC+AGG | - | chr4_3:54300518-54300537 | None:intergenic | 60.0% | |
!! | TGCTCAAAGTGCCGCAGAGG+AGG | + | chr4_3:54300517-54300536 | Msa0647950:CDS | 60.0% |
GGGCCAGACTCGCTAAAGTC+AGG | + | chr4_3:54300676-54300695 | Msa0647950:CDS | 60.0% | |
CGGGAAGGGGTCCCACCATT+TGG | - | chr4_3:54299017-54299036 | None:intergenic | 65.0% | |
CGCATATGCAGGGTCCGGGA+AGG | - | chr4_3:54299032-54299051 | None:intergenic | 65.0% | |
CTCCCGCATATGCAGGGTCC+GGG | - | chr4_3:54299036-54299055 | None:intergenic | 65.0% | |
GCTCCCGCATATGCAGGGTC+CGG | - | chr4_3:54299037-54299056 | None:intergenic | 65.0% | |
CTACGGGGAGAGGAGAGAGC+AGG | - | chr4_3:54300281-54300300 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_3 | gene | 54295656 | 54300990 | 54295656 | ID=Msa0647950;Name=Msa0647950 |
chr4_3 | mRNA | 54295656 | 54300990 | 54295656 | ID=Msa0647950-mRNA-1;Parent=Msa0647950;Name=Msa0647950-mRNA-1;_AED=0.08;_eAED=0.08;_QI=239|0.66|1|1|1|1|4|286|167 |
chr4_3 | exon | 54295656 | 54296006 | 54295656 | ID=Msa0647950-mRNA-1:exon:13683;Parent=Msa0647950-mRNA-1 |
chr4_3 | exon | 54300133 | 54300254 | 54300133 | ID=Msa0647950-mRNA-1:exon:13684;Parent=Msa0647950-mRNA-1 |
chr4_3 | exon | 54300350 | 54300538 | 54300350 | ID=Msa0647950-mRNA-1:exon:13685;Parent=Msa0647950-mRNA-1 |
chr4_3 | exon | 54300624 | 54300990 | 54300624 | ID=Msa0647950-mRNA-1:exon:13686;Parent=Msa0647950-mRNA-1 |
chr4_3 | five_prime_UTR | 54295656 | 54295894 | 54295656 | ID=Msa0647950-mRNA-1:five_prime_utr;Parent=Msa0647950-mRNA-1 |
chr4_3 | CDS | 54295895 | 54296006 | 54295895 | ID=Msa0647950-mRNA-1:cds;Parent=Msa0647950-mRNA-1 |
chr4_3 | CDS | 54300133 | 54300254 | 54300133 | ID=Msa0647950-mRNA-1:cds;Parent=Msa0647950-mRNA-1 |
chr4_3 | CDS | 54300350 | 54300538 | 54300350 | ID=Msa0647950-mRNA-1:cds;Parent=Msa0647950-mRNA-1 |
chr4_3 | CDS | 54300624 | 54300704 | 54300624 | ID=Msa0647950-mRNA-1:cds;Parent=Msa0647950-mRNA-1 |
chr4_3 | three_prime_UTR | 54300705 | 54300990 | 54300705 | ID=Msa0647950-mRNA-1:three_prime_utr;Parent=Msa0647950-mRNA-1 |
Gene Sequence |
Protein sequence |