Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0132830 | XP_024642096.1 | 90.456 | 922 | 28 | 5 | 1 | 868 | 1 | 916 | 0.0 | 1135 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0132830 | sp|G0S8G9|IF2P_CHATD | 69.061 | 181 | 52 | 2 | 688 | 864 | 506 | 686 | 1.54e-72 | 262 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0132830 | A0A396JVW8 | 90.456 | 922 | 28 | 5 | 1 | 868 | 1 | 916 | 0.0 | 1135 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006880 | Msa0132830 | 0.819585 | 1.075132e-52 | -8.615850e-47 |
| Msa0029630 | Msa0132830 | 0.812769 | 3.588350e-51 | -8.615850e-47 |
| Msa0033880 | Msa0132830 | 0.806613 | 7.555754e-50 | -8.615850e-47 |
| Msa0038000 | Msa0132830 | 0.972857 | 1.864346e-135 | -8.615850e-47 |
| Msa0038440 | Msa0132830 | 0.975602 | 2.964443e-140 | -8.615850e-47 |
| Msa0041690 | Msa0132830 | 0.805280 | 1.440350e-49 | -8.615850e-47 |
| Msa0070430 | Msa0132830 | 0.804944 | 1.693683e-49 | -8.615850e-47 |
| Msa0074750 | Msa0132830 | 0.808462 | 3.061085e-50 | -8.615850e-47 |
| Msa0079920 | Msa0132830 | 0.817099 | 3.931123e-52 | -8.615850e-47 |
| Msa0097950 | Msa0132830 | 0.877459 | 6.180981e-69 | -8.615850e-47 |
| Msa0108870 | Msa0132830 | 0.803416 | 3.522090e-49 | -8.615850e-47 |
| Msa0116790 | Msa0132830 | 0.809634 | 1.717098e-50 | -8.615850e-47 |
| Msa0123510 | Msa0132830 | 0.807788 | 4.259672e-50 | -8.615850e-47 |
| Msa0125450 | Msa0132830 | 0.807278 | 5.465510e-50 | -8.615850e-47 |
| Msa0125540 | Msa0132830 | 0.821267 | 4.422281e-53 | -8.615850e-47 |
| Msa0125880 | Msa0132830 | 0.801151 | 1.030999e-48 | -8.615850e-47 |
| Msa0127850 | Msa0132830 | 0.835870 | 1.304403e-56 | -8.615850e-47 |
| Msa0131590 | Msa0132830 | 0.832412 | 9.596227e-56 | -8.615850e-47 |
| Msa0132830 | Msa0136120 | 0.813287 | 2.763086e-51 | -8.615850e-47 |
| Msa0132830 | Msa0138750 | 0.803476 | 3.423989e-49 | -8.615850e-47 |
| Msa0132830 | Msa0147980 | 0.811799 | 5.842374e-51 | -8.615850e-47 |
| Msa0132830 | Msa0168870 | 0.807545 | 4.797384e-50 | -8.615850e-47 |
| Msa0132830 | Msa0198520 | 0.836906 | 7.110095e-57 | -8.615850e-47 |
| Msa0132830 | Msa0198530 | 0.845885 | 3.072758e-59 | -8.615850e-47 |
| Msa0132830 | Msa0240940 | 0.836077 | 1.156147e-56 | -8.615850e-47 |
| Msa0132830 | Msa0244980 | 0.807414 | 5.114397e-50 | -8.615850e-47 |
| Msa0132830 | Msa0245580 | 0.805255 | 1.457954e-49 | -8.615850e-47 |
| Msa0132830 | Msa0247060 | 0.810384 | 1.184174e-50 | -8.615850e-47 |
| Msa0132830 | Msa0285330 | 0.814967 | 1.176391e-51 | -8.615850e-47 |
| Msa0132830 | Msa0316940 | 0.875511 | 2.907851e-68 | -8.615850e-47 |
| Msa0132830 | Msa0324240 | 0.843403 | 1.431754e-58 | -8.615850e-47 |
| Msa0132830 | Msa0336360 | 0.825531 | 4.455172e-54 | -8.615850e-47 |
| Msa0132830 | Msa0342290 | 0.830796 | 2.400378e-55 | -8.615850e-47 |
| Msa0132830 | Msa0343190 | 0.821903 | 3.152650e-53 | -8.615850e-47 |
| Msa0132830 | Msa0361850 | 0.816856 | 4.456556e-52 | -8.615850e-47 |
| Msa0132830 | Msa0363060 | 0.849737 | 2.668940e-60 | -8.615850e-47 |
| Msa0132830 | Msa0363640 | 0.826478 | 2.653411e-54 | -8.615850e-47 |
| Msa0132830 | Msa0365700 | 0.800561 | 1.360245e-48 | -8.615850e-47 |
| Msa0132830 | Msa0384670 | 0.815934 | 7.166960e-52 | -8.615850e-47 |
| Msa0132830 | Msa0394690 | 0.809875 | 1.524295e-50 | -8.615850e-47 |
| Msa0132830 | Msa0413530 | 0.825632 | 4.216835e-54 | -8.615850e-47 |
| Msa0132830 | Msa0416960 | 0.815526 | 8.836571e-52 | -8.615850e-47 |
| Msa0132830 | Msa0434570 | 0.825517 | 4.488968e-54 | -8.615850e-47 |
| Msa0132830 | Msa0434770 | 0.825975 | 3.496930e-54 | -8.615850e-47 |
| Msa0132830 | Msa0450140 | 0.802940 | 4.420442e-49 | -8.615850e-47 |
| Msa0132830 | Msa0478580 | 0.833613 | 4.821646e-56 | -8.615850e-47 |
| Msa0132830 | Msa0482040 | 0.804560 | 2.037276e-49 | -8.615850e-47 |
| Msa0132830 | Msa0491000 | 0.804904 | 1.726871e-49 | -8.615850e-47 |
| Msa0132830 | Msa0504780 | 0.812670 | 3.772861e-51 | -8.615850e-47 |
| Msa0132830 | Msa0505380 | 0.802433 | 5.624309e-49 | -8.615850e-47 |
| Msa0132830 | Msa0509120 | 0.803590 | 3.241661e-49 | -8.615850e-47 |
| Msa0132830 | Msa0531250 | 0.826556 | 2.542074e-54 | -8.615850e-47 |
| Msa0132830 | Msa0564130 | 0.811095 | 8.308201e-51 | -8.615850e-47 |
| Msa0132830 | Msa0588090 | 0.813284 | 2.766607e-51 | -8.615850e-47 |
| Msa0132830 | Msa0588120 | 0.806479 | 8.062097e-50 | -8.615850e-47 |
| Msa0132830 | Msa0600450 | 0.814959 | 1.180940e-51 | -8.615850e-47 |
| Msa0132830 | Msa0606810 | 0.804757 | 1.852934e-49 | -8.615850e-47 |
| Msa0132830 | Msa0617660 | 0.823563 | 1.294974e-53 | -8.615850e-47 |
| Msa0132830 | Msa0618950 | 0.822235 | 2.640038e-53 | -8.615850e-47 |
| Msa0132830 | Msa0620330 | 0.803851 | 2.861874e-49 | -8.615850e-47 |
| Msa0132830 | Msa0622790 | 0.819151 | 1.350228e-52 | -8.615850e-47 |
| Msa0132830 | Msa0628290 | 0.800987 | 1.113804e-48 | -8.615850e-47 |
| Msa0132830 | Msa0628420 | 0.828279 | 9.818361e-55 | -8.615850e-47 |
| Msa0132830 | Msa0628500 | 0.803928 | 2.758592e-49 | -8.615850e-47 |
| Msa0132830 | Msa0640940 | 0.805814 | 1.112861e-49 | -8.615850e-47 |
| Msa0132830 | Msa0647930 | 0.809692 | 1.668569e-50 | -8.615850e-47 |
| Msa0132830 | Msa0652300 | 0.800959 | 1.128219e-48 | -8.615850e-47 |
| Msa0132830 | Msa0656960 | 0.819321 | 1.235059e-52 | -8.615850e-47 |
| Msa0132830 | Msa0658480 | 0.810824 | 9.510478e-51 | -8.615850e-47 |
| Msa0132830 | Msa0662630 | 0.800211 | 1.603051e-48 | -8.615850e-47 |
| Msa0132830 | Msa0679360 | 0.811443 | 6.983706e-51 | -8.615850e-47 |
| Msa0132830 | Msa0686080 | 0.816123 | 6.503580e-52 | -8.615850e-47 |
| Msa0132830 | Msa0687230 | 0.811035 | 8.562642e-51 | -8.615850e-47 |
| Msa0132830 | Msa0693210 | 0.815673 | 8.193458e-52 | -8.615850e-47 |
| Msa0132830 | Msa0697720 | 0.805313 | 1.417779e-49 | -8.615850e-47 |
| Msa0132830 | Msa0743530 | 0.844614 | 6.776839e-59 | -8.615850e-47 |
| Msa0132830 | Msa0744090 | 0.819974 | 8.758984e-53 | -8.615850e-47 |
| Msa0132830 | Msa0744100 | 0.854416 | 1.249375e-61 | -8.615850e-47 |
| Msa0132830 | Msa0748430 | 0.815685 | 8.145948e-52 | -8.615850e-47 |
| Msa0132830 | Msa0752700 | 0.810338 | 1.211156e-50 | -8.615850e-47 |
| Msa0132830 | Msa0788110 | 0.806086 | 9.755213e-50 | -8.615850e-47 |
| Msa0132830 | Msa0788120 | 0.834917 | 2.271624e-56 | -8.615850e-47 |
| Msa0132830 | Msa0796440 | 0.865446 | 5.871400e-65 | -8.615850e-47 |
| Msa0132830 | Msa0822170 | 0.850684 | 1.448342e-60 | -8.615850e-47 |
| Msa0132830 | Msa0822180 | 0.854186 | 1.455166e-61 | -8.615850e-47 |
| Msa0132830 | Msa0825270 | 0.855462 | 6.207081e-62 | -8.615850e-47 |
| Msa0132830 | Msa0825280 | 0.821774 | 3.376044e-53 | -8.615850e-47 |
| Msa0132830 | Msa0828680 | 0.844424 | 7.624289e-59 | -8.615850e-47 |
| Msa0132830 | Msa0829220 | 0.806416 | 8.312434e-50 | -8.615850e-47 |
| Msa0132830 | Msa0831100 | 0.803251 | 3.810414e-49 | -8.615850e-47 |
| Msa0132830 | Msa0834260 | 0.854524 | 1.162419e-61 | -8.615850e-47 |
| Msa0132830 | Msa0836500 | 0.816053 | 6.743825e-52 | -8.615850e-47 |
| Msa0132830 | Msa0851470 | 0.818055 | 2.393084e-52 | -8.615850e-47 |
| Msa0132830 | Msa0856090 | 0.824001 | 1.022430e-53 | -8.615850e-47 |
| Msa0132830 | Msa0858440 | 0.804976 | 1.668217e-49 | -8.615850e-47 |
| Msa0132830 | Msa0864420 | 0.839878 | 1.217677e-57 | -8.615850e-47 |
| Msa0132830 | Msa0878260 | 0.800463 | 1.424419e-48 | -8.615850e-47 |
| Msa0132830 | Msa0957870 | 0.803349 | 3.637076e-49 | -8.615850e-47 |
| Msa0132830 | Msa0957970 | 0.808270 | 3.362733e-50 | -8.615850e-47 |
| Msa0132830 | Msa0963020 | 0.822210 | 2.676333e-53 | -8.615850e-47 |
| Msa0132830 | Msa0968440 | 0.812432 | 4.253193e-51 | -8.615850e-47 |
| Msa0132830 | Msa1010460 | 0.819259 | 1.275693e-52 | -8.615850e-47 |
| Msa0132830 | Msa1037510 | 0.807427 | 5.083037e-50 | -8.615850e-47 |
| Msa0132830 | Msa1039760 | 0.828050 | 1.114987e-54 | -8.615850e-47 |
| Msa0132830 | Msa1039900 | 0.808496 | 3.010358e-50 | -8.615850e-47 |
| Msa0132830 | Msa1072700 | 0.816139 | 6.449029e-52 | -8.615850e-47 |
| Msa0132830 | Msa1112390 | 0.808571 | 2.900587e-50 | -8.615850e-47 |
| Msa0132830 | Msa1123830 | 0.810303 | 1.232561e-50 | -8.615850e-47 |
| Msa0132830 | Msa1128330 | 0.876001 | 1.974352e-68 | -8.615850e-47 |
| Msa0132830 | Msa1165220 | 0.824360 | 8.420216e-54 | -8.615850e-47 |
| Msa0132830 | Msa1171830 | 0.802939 | 4.421555e-49 | -8.615850e-47 |
| Msa0132830 | Msa1175390 | 0.804653 | 1.948069e-49 | -8.615850e-47 |
| Msa0132830 | Msa1178050 | 0.805827 | 1.105965e-49 | -8.615850e-47 |
| Msa0132830 | Msa1182670 | 0.864058 | 1.597542e-64 | -8.615850e-47 |
| Msa0132830 | Msa1203900 | 0.810505 | 1.115092e-50 | -8.615850e-47 |
| Msa0132830 | Msa1205480 | 0.806364 | 8.528640e-50 | -8.615850e-47 |
| Msa0132830 | Msa1205590 | 0.802317 | 5.941755e-49 | -8.615850e-47 |
| Msa0132830 | Msa1205850 | 0.808619 | 2.833121e-50 | -8.615850e-47 |
| Msa0132830 | Msa1206650 | 0.825559 | 4.388333e-54 | -8.615850e-47 |
| Msa0132830 | Msa1207730 | 0.822122 | 2.804404e-53 | -8.615850e-47 |
| Msa0132830 | Msa1211340 | 0.807637 | 4.586542e-50 | -8.615850e-47 |
| Msa0132830 | Msa1212730 | 0.818331 | 2.072764e-52 | -8.615850e-47 |
| Msa0132830 | Msa1226610 | 0.804597 | 2.001054e-49 | -8.615850e-47 |
| Msa0132830 | Msa1227690 | 0.809348 | 1.977765e-50 | -8.615850e-47 |
| Msa0132830 | Msa1230040 | 0.854723 | 1.017973e-61 | -8.615850e-47 |
| Msa0132830 | Msa1233850 | 0.826298 | 2.928916e-54 | -8.615850e-47 |
| Msa0132830 | Msa1255370 | 0.819466 | 1.144650e-52 | -8.615850e-47 |
| Msa0132830 | Msa1259640 | 0.815292 | 9.963072e-52 | -8.615850e-47 |
| Msa0132830 | Msa1272600 | 0.888620 | 5.023669e-73 | -8.615850e-47 |
| Msa0132830 | Msa1295910 | 0.817726 | 2.839205e-52 | -8.615850e-47 |
| Msa0132830 | Msa1310450 | 0.895121 | 1.294199e-75 | -8.615850e-47 |
| Msa0132830 | Msa1329790 | 0.811802 | 5.835003e-51 | -8.615850e-47 |
| Msa0132830 | Msa1344310 | 0.825425 | 4.719758e-54 | -8.615850e-47 |
| Msa0132830 | Msa1396870 | 0.984414 | 1.717754e-160 | -8.615850e-47 |
| Msa0132830 | Msa1411950 | 0.834164 | 3.512147e-56 | -8.615850e-47 |
| Msa0132830 | Msa1416260 | 0.843928 | 1.036093e-58 | -8.615850e-47 |
| Msa0132830 | Msa1426350 | 0.816068 | 6.691616e-52 | -8.615850e-47 |
| Msa0132830 | Msa1432480 | 0.823284 | 1.504482e-53 | -8.615850e-47 |
| Msa0132830 | Msa1435770 | 0.970724 | 4.706003e-132 | -8.615850e-47 |
| Msa0132830 | Msa1442790 | 0.806547 | 7.800095e-50 | -8.615850e-47 |
| Msa0132830 | Msa1448490 | 0.802304 | 5.977340e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0132830 | MtrunA17_Chr1g0202021 | 90.456 | 922 | 28 | 5 | 1 | 868 | 1 | 916 | 0.0 | 1135 |
| Msa0132830 | MtrunA17_Chr1g0201991 | 84.404 | 218 | 34 | 0 | 651 | 868 | 184 | 401 | 2.22e-125 | 397 |
| Msa0132830 | MtrunA17_Chr4g0000221 | 64.039 | 203 | 55 | 2 | 666 | 868 | 3 | 187 | 2.30e-79 | 264 |
| Msa0132830 | MtrunA17_Chr4g0000991 | 51.389 | 216 | 66 | 5 | 654 | 868 | 29 | 206 | 1.29e-60 | 211 |
| Msa0132830 | MtrunA17_Chr7g0264901 | 58.084 | 167 | 66 | 1 | 691 | 857 | 25 | 187 | 1.02e-54 | 194 |
| Msa0132830 | MtrunA17_Chr4g0004141 | 46.154 | 169 | 58 | 4 | 702 | 868 | 13 | 150 | 2.08e-36 | 143 |
| Msa0132830 | MtrunA17_Chr7g0264471 | 45.679 | 162 | 78 | 2 | 698 | 858 | 51 | 203 | 3.16e-36 | 140 |
| Msa0132830 | MtrunA17_Chr2g0312621 | 42.636 | 129 | 62 | 1 | 702 | 830 | 495 | 611 | 4.72e-22 | 102 |
| Msa0132830 | MtrunA17_Chr5g0412261 | 40.541 | 111 | 51 | 2 | 702 | 812 | 200 | 295 | 1.07e-17 | 88.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0132830 | AT1G76720.2 | 51.606 | 903 | 315 | 34 | 1 | 868 | 11 | 826 | 5.27e-159 | 497 |
| Msa0132830 | AT1G76720.1 | 55.047 | 743 | 244 | 25 | 167 | 868 | 100 | 793 | 1.10e-151 | 477 |
| Msa0132830 | AT1G76810.1 | 55.411 | 767 | 272 | 22 | 142 | 868 | 134 | 870 | 2.77e-146 | 465 |
| Msa0132830 | AT1G21160.1 | 50.909 | 605 | 232 | 17 | 293 | 868 | 94 | 662 | 6.58e-123 | 398 |
| Msa0132830 | AT2G27700.2 | 64.251 | 207 | 63 | 4 | 662 | 868 | 5 | 200 | 1.39e-82 | 274 |
| Msa0132830 | AT2G27700.1 | 64.251 | 207 | 63 | 4 | 662 | 868 | 5 | 200 | 1.49e-82 | 274 |
| Msa0132830 | AT1G17220.1 | 41.985 | 131 | 60 | 2 | 702 | 830 | 500 | 616 | 1.54e-21 | 101 |
| Msa0132830 | AT4G11160.3 | 38.346 | 133 | 60 | 2 | 702 | 830 | 218 | 332 | 3.40e-21 | 99.4 |
| Msa0132830 | AT4G11160.1 | 38.346 | 133 | 60 | 2 | 702 | 830 | 216 | 330 | 8.90e-21 | 98.6 |
| Msa0132830 | AT4G11160.2 | 38.346 | 133 | 60 | 2 | 702 | 830 | 218 | 332 | 1.09e-20 | 98.2 |
Find 219 sgRNAs with CRISPR-Local
Find 379 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGTACGAAATTTGTGTAAA+AGG | 0.120489 | 1_3:+64090204 | None:intergenic |
| GAAAACCCTAATCTCATAAA+TGG | 0.164657 | 1_3:-64090163 | Msa0132830:exon |
| TTGCAGGTTGACAGGCTTTA+TGG | 0.183037 | 1_3:-64086876 | Msa0132830:intron |
| CCTTTCTTTGTCTGATAAAT+AGG | 0.186529 | 1_3:+64088533 | None:intergenic |
| TCTATGTGATATTGCAATTT+TGG | 0.214686 | 1_3:-64087073 | Msa0132830:CDS |
| GAACCGGTTGTTAGCTTTAC+AGG | 0.257455 | 1_3:-64089709 | Msa0132830:CDS |
| GGTGGAAGTGTGTTTGCTTC+TGG | 0.266460 | 1_3:-64089820 | Msa0132830:CDS |
| CACTTTCTTGTCAGCCGCTT+TGG | 0.268956 | 1_3:+64088883 | None:intergenic |
| GGTTCTGCCCCTGGTGCTTC+AGG | 0.278743 | 1_3:-64089082 | Msa0132830:CDS |
| TTCTCGTCGTCGCGGATTGC+TGG | 0.281368 | 1_3:+64090129 | None:intergenic |
| CTTCCCCATTTATGAGATTA+GGG | 0.297082 | 1_3:+64090158 | None:intergenic |
| AGAAAGTGCCAAAGCATGTT+AGG | 0.301941 | 1_3:-64088868 | Msa0132830:CDS |
| AAGGCAGCGGCAGCAGCAGC+TGG | 0.303633 | 1_3:-64088977 | Msa0132830:CDS |
| TCTTCCCCATTTATGAGATT+AGG | 0.311680 | 1_3:+64090157 | None:intergenic |
| ATTCATTGTTGCATTGAATA+AGG | 0.320644 | 1_3:-64086977 | Msa0132830:intron |
| CCCTTTCTTCGAACCCTTCG+AGG | 0.321277 | 1_3:+64089675 | None:intergenic |
| AACTTGAGGTCTCGGGGTTC+AGG | 0.322803 | 1_3:-64087096 | Msa0132830:CDS |
| GTGAGTGATGAAATCGAGTT+TGG | 0.323250 | 1_3:-64089352 | Msa0132830:CDS |
| TGCATCAGCTTTCAGTTCCT+TGG | 0.331642 | 1_3:+64087176 | None:intergenic |
| GCAGCAGGTTGTGCTGTAGC+AGG | 0.333529 | 1_3:+64089151 | None:intergenic |
| CGTACGAAATTTGTGTAAAA+GGG | 0.335560 | 1_3:+64090205 | None:intergenic |
| AGTGTGTTTGCTTCTGGATT+TGG | 0.335749 | 1_3:-64089814 | Msa0132830:CDS |
| TCTTCTACAGCTTCAATTAC+CGG | 0.335849 | 1_3:+64088947 | None:intergenic |
| TGCATCTCCCTAACATGCTT+TGG | 0.339681 | 1_3:+64088860 | None:intergenic |
| TCAGCTGCAGGCTTCGTAAC+AGG | 0.343911 | 1_3:+64087462 | None:intergenic |
| TTCCCTTCACTCGGCTTAGA+AGG | 0.346826 | 1_3:+64087360 | None:intergenic |
| TTCATTGAGTAAAGCTATTC+CGG | 0.362489 | 1_3:-64089506 | Msa0132830:CDS |
| TGACCCATGATGCAGCAAAT+TGG | 0.364112 | 1_3:+64087327 | None:intergenic |
| GAAAGAAGAAGCCCGGCGTT+TGG | 0.370964 | 1_3:-64088636 | Msa0132830:CDS |
| GCTTCTGGATTTGGTGTGCT+TGG | 0.371860 | 1_3:-64089805 | Msa0132830:CDS |
| AAAACCCTAATCTCATAAAT+GGG | 0.380417 | 1_3:-64090162 | Msa0132830:exon |
| CACTGGCAAAACCAAGCTTC+TGG | 0.384093 | 1_3:-64087298 | Msa0132830:CDS |
| ATGATGTCAATCTGAATGAT+AGG | 0.389984 | 1_3:-64088298 | Msa0132830:CDS |
| CAGGAAGGTAAATTGTTAAC+TGG | 0.390014 | 1_3:-64088665 | Msa0132830:CDS |
| GGTTTCTCTTCCACCGCAAC+CGG | 0.398483 | 1_3:+64090003 | None:intergenic |
| CCACCGCCTTGTTGCGGCGG+AGG | 0.398804 | 1_3:+64090105 | None:intergenic |
| GTCGCCAATTTGCTGCATCA+TGG | 0.404818 | 1_3:-64087331 | Msa0132830:CDS |
| TTCTTACCCGAGAAAGTGAT+TGG | 0.411659 | 1_3:+64089565 | None:intergenic |
| TCTTCAGTTTCTTCAGCTGC+AGG | 0.413951 | 1_3:+64087450 | None:intergenic |
| TTATTGAATGACTCGTGTCC+TGG | 0.414476 | 1_3:+64087117 | None:intergenic |
| TAATGATGATGAAGAGAAAT+CGG | 0.414892 | 1_3:-64089764 | Msa0132830:CDS |
| CCTATTTATCAGACAAAGAA+AGG | 0.419360 | 1_3:-64088533 | Msa0132830:CDS |
| GTTCAGCCGGTTCCTGTAGT+AGG | 0.420123 | 1_3:-64089103 | Msa0132830:CDS |
| TTGAGTGACTCTATAGTTTG+TGG | 0.428244 | 1_3:+64087024 | None:intergenic |
| CATTCAATAACTTGAGGTCT+CGG | 0.430364 | 1_3:-64087104 | Msa0132830:CDS |
| CTCGATTTCATCACTCACTT+TGG | 0.433153 | 1_3:+64089357 | None:intergenic |
| CAGCAGGTTGTGCTGTAGCA+GGG | 0.434057 | 1_3:+64089152 | None:intergenic |
| TCCTCATTGCCTCCAAACGC+CGG | 0.435876 | 1_3:+64088624 | None:intergenic |
| AGCAATGACACAGCAGTCTA+AGG | 0.435929 | 1_3:-64086820 | Msa0132830:CDS |
| ATGATGATGTTGAGGATGAA+TGG | 0.437230 | 1_3:-64088337 | Msa0132830:CDS |
| ACTACTTCTTCAACAACTTC+AGG | 0.437617 | 1_3:+64088368 | None:intergenic |
| AAGCTTCTGGATTGCATTCG+AGG | 0.438347 | 1_3:-64087285 | Msa0132830:CDS |
| CCCTGGTGCTTCAGGAGAAA+AGG | 0.442140 | 1_3:-64089074 | Msa0132830:CDS |
| ACTCTTCCTGGCGCGGACAC+TGG | 0.442324 | 1_3:-64088572 | Msa0132830:CDS |
| ACAACGAATCGAAATCATAA+TGG | 0.444429 | 1_3:-64088506 | Msa0132830:CDS |
| TTTATCCTCAACCACAACTT+TGG | 0.444603 | 1_3:+64087416 | None:intergenic |
| TGCTGAGGAGGAGCCGCAGC+AGG | 0.448228 | 1_3:+64089136 | None:intergenic |
| ATTCAATAACTTGAGGTCTC+GGG | 0.449916 | 1_3:-64087103 | Msa0132830:CDS |
| TGTGTCATTGCTTTACGAAT+TGG | 0.449988 | 1_3:+64086831 | None:intergenic |
| AGGAAGAGGAAGAGAAGCAA+AGG | 0.451717 | 1_3:-64088793 | Msa0132830:CDS |
| AGATTCAGAGGAACCTGAAA+AGG | 0.452639 | 1_3:-64088426 | Msa0132830:CDS |
| GGTGTCAGAGGATGCGGCTC+CGG | 0.452789 | 1_3:-64090022 | Msa0132830:CDS |
| TGCTTTGTGCGGCGGTGAAA+AGG | 0.453233 | 1_3:+64090292 | None:intergenic |
| GATGCAACACTGAAAGTTCC+CGG | 0.455894 | 1_3:-64087159 | Msa0132830:CDS |
| TGCTGCGGCTCCTCCTCAGC+AGG | 0.455982 | 1_3:-64089134 | Msa0132830:CDS |
| CTTTCACGTATGTTCTCAGC+AGG | 0.456275 | 1_3:+64087201 | None:intergenic |
| AGAGGATGCGGCTCCGGTTG+CGG | 0.458787 | 1_3:-64090016 | Msa0132830:CDS |
| TCGCAACATTGCAGGTTGAC+AGG | 0.458948 | 1_3:-64086884 | Msa0132830:intron |
| TGATGAACCAATCACTTTCT+CGG | 0.459759 | 1_3:-64089572 | Msa0132830:CDS |
| CCTCGAAGGGTTCGAAGAAA+GGG | 0.460536 | 1_3:-64089675 | Msa0132830:CDS |
| TTCCCTGTAAAGCTAACAAC+CGG | 0.468099 | 1_3:+64089706 | None:intergenic |
| GATAGAGGAACTTGAGAGAC+AGG | 0.468572 | 1_3:-64088747 | Msa0132830:CDS |
| AGAAACTGAAGATAGAAAAC+AGG | 0.470475 | 1_3:-64087439 | Msa0132830:CDS |
| TTTCAATGTAACAGCGAAAG+AGG | 0.476022 | 1_3:+64090252 | None:intergenic |
| GATGAACCAATCACTTTCTC+GGG | 0.476483 | 1_3:-64089571 | Msa0132830:CDS |
| TCCTCGAAGGGTTCGAAGAA+AGG | 0.476498 | 1_3:-64089676 | Msa0132830:CDS |
| GAAGAGAAATCGGAGGTAAC+CGG | 0.477907 | 1_3:-64089754 | Msa0132830:CDS |
| GGTCCACCAGTGTCCGCGCC+AGG | 0.479029 | 1_3:+64088566 | None:intergenic |
| AATGTTCAAGAAGGTGAGGC+TGG | 0.479918 | 1_3:-64087258 | Msa0132830:CDS |
| TATTCATCGTCATCGATAAC+CGG | 0.480313 | 1_3:+64090063 | None:intergenic |
| ACTGAAAGTTCCCGGTCTAC+TGG | 0.483185 | 1_3:-64087151 | Msa0132830:CDS |
| CCTCATTGCCTCCAAACGCC+GGG | 0.486379 | 1_3:+64088625 | None:intergenic |
| TCGCCAATTTGCTGCATCAT+GGG | 0.487968 | 1_3:-64087330 | Msa0132830:CDS |
| GATAAGCTTCTCGCAGAGCT+TGG | 0.489009 | 1_3:-64089181 | Msa0132830:CDS |
| AGCCTCACCTTCTTGAACAT+TGG | 0.489331 | 1_3:+64087260 | None:intergenic |
| TGAGAATGATGATGGAGAAG+AGG | 0.490930 | 1_3:-64089626 | Msa0132830:CDS |
| TGATGATGTTGAGGATGAAT+GGG | 0.491154 | 1_3:-64088336 | Msa0132830:CDS |
| AGAGGAGCGACGAAGGATAG+AGG | 0.492105 | 1_3:-64088762 | Msa0132830:CDS |
| TAGGGAGATGCAAGAACTAC+TGG | 0.496180 | 1_3:-64088849 | Msa0132830:CDS |
| AGAGGAGAGTAAGAATGAAA+AGG | 0.496191 | 1_3:-64089608 | Msa0132830:CDS |
| CCTGTAGTAGGTTCTGCCCC+TGG | 0.500848 | 1_3:-64089091 | Msa0132830:CDS |
| CGATGACGATGAGGATGAAC+CGG | 0.501281 | 1_3:-64089725 | Msa0132830:CDS |
| TTCAGAATGAGTTCAATATG+AGG | 0.501847 | 1_3:-64086794 | Msa0132830:CDS |
| GTCATCAAAGGGTTCGAAGA+AGG | 0.501993 | 1_3:-64089536 | Msa0132830:CDS |
| AAAAGAATAAGAAGAAGAGT+GGG | 0.502262 | 1_3:-64089231 | Msa0132830:CDS |
| TATTGAATGACTCGTGTCCT+GGG | 0.502284 | 1_3:+64087118 | None:intergenic |
| AGGCAGATTCTCAATAGCAC+AGG | 0.506514 | 1_3:-64088602 | Msa0132830:CDS |
| CCTCCGCCGCAACAAGGCGG+TGG | 0.509665 | 1_3:-64090105 | Msa0132830:CDS |
| AGAGGCTAAACGTAGAAAGA+AGG | 0.510786 | 1_3:-64088720 | Msa0132830:CDS |
| GACCGAAGGTTCCCTTCACT+CGG | 0.511610 | 1_3:+64087351 | None:intergenic |
| GGTTGAAGAAGTGGAGATGG+AGG | 0.513489 | 1_3:-64088405 | Msa0132830:CDS |
| AGCCGAGTGAAGGGAACCTT+CGG | 0.515404 | 1_3:-64087353 | Msa0132830:CDS |
| GCAGAACCTACTACAGGAAC+CGG | 0.517619 | 1_3:+64089097 | None:intergenic |
| AAAGGTTGAAGAAGTGGAGA+TGG | 0.518426 | 1_3:-64088408 | Msa0132830:CDS |
| CTTCCTGGCGCGGACACTGG+TGG | 0.519626 | 1_3:-64088569 | Msa0132830:CDS |
| GGAGGAGGTGTCAGAGGATG+CGG | 0.521052 | 1_3:-64090028 | Msa0132830:CDS |
| ACGAAAATTGCTTTGTGCGG+CGG | 0.521104 | 1_3:+64090284 | None:intergenic |
| AGCAGCAGCTGGAAGTGCAC+CGG | 0.523466 | 1_3:-64088966 | Msa0132830:CDS |
| ATGTTCAAGAAGGTGAGGCT+GGG | 0.524700 | 1_3:-64087257 | Msa0132830:CDS |
| TGGGAGGACTAAAGAAGAGG+AGG | 0.525672 | 1_3:-64089212 | Msa0132830:CDS |
| AGAATAAGAAGAAGAGTGGG+AGG | 0.527306 | 1_3:-64089228 | Msa0132830:CDS |
| AGGTTGACAGGCTTTATGGC+TGG | 0.530442 | 1_3:-64086872 | Msa0132830:CDS |
| TCGAATGCAATCCAGAAGCT+TGG | 0.530972 | 1_3:+64087287 | None:intergenic |
| TTTCCACCGCCTTGTTGCGG+CGG | 0.531546 | 1_3:+64090102 | None:intergenic |
| GAAAGTGCCAAAGCATGTTA+GGG | 0.533187 | 1_3:-64088867 | Msa0132830:CDS |
| ACCTGAAAAGGTTGAAGAAG+TGG | 0.535666 | 1_3:-64088414 | Msa0132830:CDS |
| GTACGTTGCACCAATCTGTT+GGG | 0.541158 | 1_3:+64087227 | None:intergenic |
| GAAGCAAAGGAAAGAAGAAG+AGG | 0.544089 | 1_3:-64088780 | Msa0132830:CDS |
| TGAGTGATGAAATCGAGTTT+GGG | 0.545205 | 1_3:-64089351 | Msa0132830:CDS |
| TCTGTATCTGAGTCTGCTAA+AGG | 0.545690 | 1_3:-64089469 | Msa0132830:CDS |
| AGTACGTTGCACCAATCTGT+TGG | 0.546668 | 1_3:+64087226 | None:intergenic |
| GTACGAAATTTGTGTAAAAG+GGG | 0.548442 | 1_3:+64090206 | None:intergenic |
| GAGTGGGAGGACTAAAGAAG+AGG | 0.548679 | 1_3:-64089215 | Msa0132830:CDS |
| TTTGACAATTGGTTCAGGCT+CGG | 0.549296 | 1_3:+64088247 | None:intergenic |
| CTCATCGTCATCGCCCTCAC+CGG | 0.549764 | 1_3:+64089735 | None:intergenic |
| AAATCGGAGGTAACCGGTGA+GGG | 0.551033 | 1_3:-64089748 | Msa0132830:CDS |
| AGCAGGTTGTGCTGTAGCAG+GGG | 0.552590 | 1_3:+64089153 | None:intergenic |
| GGTATCAATAACCAGTAGAC+CGG | 0.552679 | 1_3:+64087140 | None:intergenic |
| AGAAGAAGCCCGGCGTTTGG+AGG | 0.555273 | 1_3:-64088633 | Msa0132830:CDS |
| GAGTAAAGCTATTCCGGAGG+AGG | 0.555869 | 1_3:-64089500 | Msa0132830:CDS |
| CGGTGGAAAATCAAAGAAGA+AGG | 0.555949 | 1_3:-64090088 | Msa0132830:CDS |
| GCATTAGATGAGAATGATGA+TGG | 0.559178 | 1_3:-64089634 | Msa0132830:CDS |
| TGTTCAAGAAGGTGAGGCTG+GGG | 0.559825 | 1_3:-64087256 | Msa0132830:CDS |
| GAAGGCACGGCAGACAGTTG+TGG | 0.563477 | 1_3:+64087378 | None:intergenic |
| ACAGAAACACTATCCTCCTC+CGG | 0.563721 | 1_3:+64089487 | None:intergenic |
| TCAAAGGGTTCGAAGAAGGC+AGG | 0.566364 | 1_3:-64089532 | Msa0132830:CDS |
| ACTACTGGCTAGAAGAAAAG+AGG | 0.566570 | 1_3:-64088834 | Msa0132830:CDS |
| AAGAAGAAGAGGAGCGACGA+AGG | 0.568334 | 1_3:-64088769 | Msa0132830:CDS |
| ACAGGCCAAAGTTGTGGTTG+AGG | 0.569051 | 1_3:-64087421 | Msa0132830:CDS |
| TGATGTCAATCTGAATGATA+GGG | 0.569686 | 1_3:-64088297 | Msa0132830:CDS |
| GTAAGCAGAAAGAAGAAGCC+CGG | 0.569714 | 1_3:-64088643 | Msa0132830:CDS |
| CGGAGTGGAGGAGGTGTCAG+AGG | 0.573069 | 1_3:-64090034 | Msa0132830:CDS |
| GCAGGATGATAAAGTTCAGC+CGG | 0.573080 | 1_3:-64089116 | Msa0132830:CDS |
| GTGCCTTCTAAGCCGAGTGA+AGG | 0.573219 | 1_3:-64087363 | Msa0132830:CDS |
| ATATTCTATCGGAGTGGAGG+AGG | 0.574722 | 1_3:-64090043 | Msa0132830:CDS |
| AAAAGTGGTGGTGGTAGTAG+TGG | 0.574855 | 1_3:-64089841 | Msa0132830:CDS |
| GGATGCGGCTCCGGTTGCGG+TGG | 0.575979 | 1_3:-64090013 | Msa0132830:CDS |
| GGGCATGACTCTTCCTGGCG+CGG | 0.576478 | 1_3:-64088579 | Msa0132830:CDS |
| GTTGCGGTGGAAGAGAAACC+CGG | 0.576756 | 1_3:-64090000 | Msa0132830:CDS |
| AGAAAAGGAGAAGAAGGCAG+CGG | 0.577587 | 1_3:-64088990 | Msa0132830:CDS |
| AGTAAGAGTGAAGAGGTCGT+TGG | 0.577832 | 1_3:-64089271 | Msa0132830:CDS |
| GGGAAGAAGAAATCCTCGAA+GGG | 0.578909 | 1_3:-64089688 | Msa0132830:CDS |
| TACTGCTGATTTAGATTCAG+AGG | 0.580560 | 1_3:-64088438 | Msa0132830:CDS |
| ACTTGAGAGACAGGCAGAAG+AGG | 0.581232 | 1_3:-64088738 | Msa0132830:CDS |
| AGATGAAAGTGTTGAAGCAA+CGG | 0.581844 | 1_3:-64088465 | Msa0132830:CDS |
| TTGGTCGTGGACATTATGCA+TGG | 0.582868 | 1_3:-64087054 | Msa0132830:CDS |
| ATATTACCATTGTCAACACT+AGG | 0.583473 | 1_3:+64089295 | None:intergenic |
| ATTTGGTGTGCTTGGTGATG+AGG | 0.584128 | 1_3:-64089797 | Msa0132830:CDS |
| TGCTACAGCACAACCTGCTG+CGG | 0.584367 | 1_3:-64089149 | Msa0132830:CDS |
| TTCAATAACTTGAGGTCTCG+GGG | 0.585880 | 1_3:-64087102 | Msa0132830:CDS |
| TAGAAAACAGGCCAAAGTTG+TGG | 0.586435 | 1_3:-64087427 | Msa0132830:CDS |
| ACTTTATCATCCTGCTGAGG+AGG | 0.588843 | 1_3:+64089124 | None:intergenic |
| CCAGGGGCAGAACCTACTAC+AGG | 0.591678 | 1_3:+64089091 | None:intergenic |
| CGAGGTACCAATGTTCAAGA+AGG | 0.591705 | 1_3:-64087267 | Msa0132830:CDS |
| GTTCAATATGAGGGTCACTC+AGG | 0.592840 | 1_3:-64086784 | Msa0132830:CDS |
| TGAAGTTGTTGAAGAAGTAG+TGG | 0.593967 | 1_3:-64088366 | Msa0132830:CDS |
| GGATGAAGATGATGATGTTG+AGG | 0.594806 | 1_3:-64088345 | Msa0132830:CDS |
| GAGAATCCTCCGCCGCAACA+AGG | 0.596347 | 1_3:-64090111 | Msa0132830:CDS |
| TGCAGCAAATTGGCGACCGA+AGG | 0.597673 | 1_3:+64087337 | None:intergenic |
| TGCCTTCTAAGCCGAGTGAA+GGG | 0.599569 | 1_3:-64087362 | Msa0132830:CDS |
| AGTGGTGGTGGTAGTAGTGG+TGG | 0.603621 | 1_3:-64089838 | Msa0132830:CDS |
| AAAATCAAAGAAGAAGGCTC+CGG | 0.604903 | 1_3:-64090082 | Msa0132830:CDS |
| GGCGTTTGGAGGCAATGAGG+AGG | 0.605409 | 1_3:-64088622 | Msa0132830:CDS |
| TGGTGCTTCAGGAGAAAAGG+AGG | 0.608601 | 1_3:-64089071 | Msa0132830:CDS |
| CTATTTATCAGACAAAGAAA+GGG | 0.609015 | 1_3:-64088532 | Msa0132830:CDS |
| GATGACGATGAATATTCTAT+CGG | 0.610557 | 1_3:-64090054 | Msa0132830:CDS |
| TTGCTGCATCATGGGTCATG+TGG | 0.613343 | 1_3:-64087322 | Msa0132830:CDS |
| TACCAATGTTCAAGAAGGTG+AGG | 0.614228 | 1_3:-64087262 | Msa0132830:CDS |
| TAATATAAGTAAGAGTGAAG+AGG | 0.616758 | 1_3:-64089278 | Msa0132830:CDS |
| TTCACTCGGCTTAGAAGGCA+CGG | 0.621700 | 1_3:+64087365 | None:intergenic |
| CAGATTCTCAATAGCACAGG+GGG | 0.622051 | 1_3:-64088599 | Msa0132830:CDS |
| GGCAGATTCTCAATAGCACA+GGG | 0.625757 | 1_3:-64088601 | Msa0132830:CDS |
| CGGTGAGGGCGATGACGATG+AGG | 0.627256 | 1_3:-64089734 | Msa0132830:CDS |
| CCCGGCGTTTGGAGGCAATG+AGG | 0.629537 | 1_3:-64088625 | Msa0132830:CDS |
| TGAATATTCTATCGGAGTGG+AGG | 0.629646 | 1_3:-64090046 | Msa0132830:CDS |
| AAAACGAAAATTGCTTTGTG+CGG | 0.632518 | 1_3:+64090281 | None:intergenic |
| AGGGAAGAAGAAATCCTCGA+AGG | 0.633393 | 1_3:-64089689 | Msa0132830:CDS |
| CTCGAAGGGTTCGAAGAAAG+GGG | 0.633881 | 1_3:-64089674 | Msa0132830:CDS |
| GAGTGAAAGTGTAAATGTTG+TGG | 0.635334 | 1_3:-64089329 | Msa0132830:CDS |
| TCAGAATGAGTTCAATATGA+GGG | 0.640267 | 1_3:-64086793 | Msa0132830:CDS |
| ACGAGTCATTCAATAACTTG+AGG | 0.644529 | 1_3:-64087110 | Msa0132830:CDS |
| CTACTGGTTATTGATACCCC+AGG | 0.645521 | 1_3:-64087135 | Msa0132830:CDS |
| TTGCGGTGGAAGAGAAACCC+GGG | 0.650130 | 1_3:-64089999 | Msa0132830:CDS |
| TGATGATGAAGAGAAATCGG+AGG | 0.651638 | 1_3:-64089761 | Msa0132830:CDS |
| AACCGGTTGTTAGCTTTACA+GGG | 0.652337 | 1_3:-64089708 | Msa0132830:CDS |
| TTCATCTGTCTTGACAGCAG+CGG | 0.655555 | 1_3:+64088481 | None:intergenic |
| AAACCCTAATCTCATAAATG+GGG | 0.655994 | 1_3:-64090161 | Msa0132830:exon |
| TGAAAGTGTAAATGTTGTGG+AGG | 0.660670 | 1_3:-64089326 | Msa0132830:CDS |
| CGATGAATATTCTATCGGAG+TGG | 0.661588 | 1_3:-64090049 | Msa0132830:CDS |
| ATCATGGGTCATGTGGACAC+TGG | 0.664092 | 1_3:-64087315 | Msa0132830:CDS |
| GTTCAAGAAGGTGAGGCTGG+GGG | 0.665074 | 1_3:-64087255 | Msa0132830:CDS |
| GAAATCGGAGGTAACCGGTG+AGG | 0.668178 | 1_3:-64089749 | Msa0132830:CDS |
| ATTGAATGACTCGTGTCCTG+GGG | 0.670625 | 1_3:+64087119 | None:intergenic |
| TGGTGATGATGAGAAAGATG+AGG | 0.670930 | 1_3:-64089446 | Msa0132830:CDS |
| GTATCTGAGTCTGCTAAAGG+TGG | 0.673325 | 1_3:-64089466 | Msa0132830:CDS |
| TGAACTTTATCATCCTGCTG+AGG | 0.673872 | 1_3:+64089121 | None:intergenic |
| GTATCAATAACCAGTAGACC+GGG | 0.674744 | 1_3:+64087141 | None:intergenic |
| AAGGGTTCGAAGAAGGCAGG+TGG | 0.678507 | 1_3:-64089529 | Msa0132830:CDS |
| GAGAAGCCTAGTGTTGACAA+TGG | 0.678840 | 1_3:-64089301 | Msa0132830:CDS |
| GCGGAGGATTCTCGTCGTCG+CGG | 0.685176 | 1_3:+64090121 | None:intergenic |
| ATTGAGTAAAGCTATTCCGG+AGG | 0.685642 | 1_3:-64089503 | Msa0132830:CDS |
| GGTGCTTCAGGAGAAAAGGA+GGG | 0.687014 | 1_3:-64089070 | Msa0132830:CDS |
| AGCTGTAGAAGAGAAAGCTG+AGG | 0.688379 | 1_3:-64088936 | Msa0132830:CDS |
| GATGTCAATCTGAATGATAG+GGG | 0.693218 | 1_3:-64088296 | Msa0132830:CDS |
| TCGAAGGGTTCGAAGAAAGG+GGG | 0.694476 | 1_3:-64089673 | Msa0132830:CDS |
| AATCCTCCGCCGCAACAAGG+CGG | 0.709148 | 1_3:-64090108 | Msa0132830:CDS |
| GAACATACGTGAAAGAACCA+AGG | 0.716522 | 1_3:-64087193 | Msa0132830:CDS |
| AAATGATTCGAAGACCAAAG+CGG | 0.720285 | 1_3:-64088897 | Msa0132830:CDS |
| GCAGATTCTCAATAGCACAG+GGG | 0.788332 | 1_3:-64088600 | Msa0132830:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAACATTATTTTATAACA+AGG | + | chr1_3:64089458-64089477 | None:intergenic | 10.0% |
| !! | AGAAAAAAATTCAAAAACTA+AGG | + | chr1_3:64087734-64087753 | None:intergenic | 15.0% |
| !! | AATAAACTAGTAAATTATTG+TGG | - | chr1_3:64087816-64087835 | Msa0132830:intron | 15.0% |
| !! | ATAAACTAGTAAATTATTGT+GGG | - | chr1_3:64087817-64087836 | Msa0132830:intron | 15.0% |
| !!! | TTAAAGTATTAAATTTTACG+AGG | + | chr1_3:64088148-64088167 | None:intergenic | 15.0% |
| !!! | AGTTTTTTTGTTTTTGTTTT+TGG | - | chr1_3:64088943-64088962 | Msa0132830:CDS | 15.0% |
| !!! | TCAAATACTTAATTTTTCAA+AGG | - | chr1_3:64089283-64089302 | Msa0132830:CDS | 15.0% |
| !!! | AGTTTTTGAATTTTTTTTCT+TGG | + | chr1_3:64089620-64089639 | None:intergenic | 15.0% |
| !!! | ATCATCATCATTATCTTTTT+TGG | + | chr1_3:64085756-64085775 | None:intergenic | 20.0% |
| !!! | CTTATTCTTTTTCTTATTCT+TGG | + | chr1_3:64086458-64086477 | None:intergenic | 20.0% |
| !! | AAAAAAGAAGAAAAAGAAGA+AGG | - | chr1_3:64086681-64086700 | Msa0132830:intron | 20.0% |
| !!! | TTAATCTCTTTTTTGACAAT+TGG | + | chr1_3:64087465-64087484 | None:intergenic | 20.0% |
| !! | GTCAAAAAAGAGATTAAAAA+TGG | - | chr1_3:64087468-64087487 | Msa0132830:CDS | 20.0% |
| !!! | AATATAAATTGATGCTACTT+TGG | - | chr1_3:64087690-64087709 | Msa0132830:intron | 20.0% |
| !!! | TTCCAATATATGTTTTTTAC+AGG | - | chr1_3:64088769-64088788 | Msa0132830:CDS | 20.0% |
| !! | AACCTGTAAAAAACATATAT+TGG | + | chr1_3:64088774-64088793 | None:intergenic | 20.0% |
| !! | AATTAAGTATTTGATTGAGA+GGG | + | chr1_3:64089277-64089296 | None:intergenic | 20.0% |
| !! | AAATTAAGTATTTGATTGAG+AGG | + | chr1_3:64089278-64089297 | None:intergenic | 20.0% |
| !!! | TTTACAAATTGATTTCACAT+AGG | + | chr1_3:64089416-64089435 | None:intergenic | 20.0% |
| !!! | GAGTTGAAATTTTGAATTAT+TGG | + | chr1_3:64089527-64089546 | None:intergenic | 20.0% |
| !! | TAAATGAAACTGAATTTACT+TGG | + | chr1_3:64089692-64089711 | None:intergenic | 20.0% |
| !! | AATACAGATAGATTAACTTA+AGG | - | chr1_3:64090223-64090242 | Msa0132830:five_prime_UTR | 20.0% |
| !! | ATACAGATAGATTAACTTAA+GGG | - | chr1_3:64090224-64090243 | Msa0132830:five_prime_UTR | 20.0% |
| ! | AAAACCCTAATCTCATAAAT+GGG | - | chr1_3:64085536-64085555 | Msa0132830:intron | 25.0% |
| !!! | TGAATGAAATTGTTTTTGCT+GGG | - | chr1_3:64085813-64085832 | Msa0132830:intron | 25.0% |
| !! | TAATGATGATGAAGAGAAAT+CGG | - | chr1_3:64085934-64085953 | Msa0132830:intron | 25.0% |
| ! | TAAGAAAAAGAAGTCATCAA+AGG | - | chr1_3:64086150-64086169 | Msa0132830:intron | 25.0% |
| ! | AAGAAAAAGAAGTCATCAAA+GGG | - | chr1_3:64086151-64086170 | Msa0132830:intron | 25.0% |
| !! | AAGTCTTCTAAAAAGAAAAG+TGG | - | chr1_3:64086307-64086326 | Msa0132830:intron | 25.0% |
| ! | TAATATAAGTAAGAGTGAAG+AGG | - | chr1_3:64086420-64086439 | Msa0132830:intron | 25.0% |
| ! | AAAAAGAATAAGAAGAAGAG+TGG | - | chr1_3:64086466-64086485 | Msa0132830:intron | 25.0% |
| ! | AAAAGAATAAGAAGAAGAGT+GGG | - | chr1_3:64086467-64086486 | Msa0132830:intron | 25.0% |
| !!! | CTTCTTTTTCTTCTTTTTTG+CGG | + | chr1_3:64086680-64086699 | None:intergenic | 25.0% |
| ! | AAAGAAGAAGGAAAAAGAAA+AGG | - | chr1_3:64086693-64086712 | Msa0132830:intron | 25.0% |
| ! | AGAAAAAAAGAAAAAGGAAG+AGG | - | chr1_3:64086891-64086910 | Msa0132830:intron | 25.0% |
| ! | TAGAAAGAAGGAAAAAGAAA+AGG | - | chr1_3:64086990-64087009 | Msa0132830:CDS | 25.0% |
| !!! | TGATAAATAGGTTTTTTGGA+TGG | + | chr1_3:64087156-64087175 | None:intergenic | 25.0% |
| !!! | TGTCTGATAAATAGGTTTTT+TGG | + | chr1_3:64087160-64087179 | None:intergenic | 25.0% |
| ! | CTATTTATCAGACAAAGAAA+GGG | - | chr1_3:64087166-64087185 | Msa0132830:CDS | 25.0% |
| ! | TAAAATTCTAACACTACAGT+AGG | + | chr1_3:64087668-64087687 | None:intergenic | 25.0% |
| !!! | TGCTACTTTGGAATATTTTA+TGG | - | chr1_3:64087702-64087721 | Msa0132830:intron | 25.0% |
| !!! | GTTTTTGAATTTTTTTCTGC+TGG | - | chr1_3:64087736-64087755 | Msa0132830:intron | 25.0% |
| ! | AAGAAATAGAAATACAGTGT+TGG | + | chr1_3:64087925-64087944 | None:intergenic | 25.0% |
| !! | TCTATGTGATATTGCAATTT+TGG | - | chr1_3:64088625-64088644 | Msa0132830:CDS | 25.0% |
| ! | CACTCAATCTATTAAAAATG+AGG | - | chr1_3:64088690-64088709 | Msa0132830:CDS | 25.0% |
| ! | ATTCATTGTTGCATTGAATA+AGG | - | chr1_3:64088721-64088740 | Msa0132830:CDS | 25.0% |
| !!! | TTTTTGTTTTTGGTAAGTTG+TGG | - | chr1_3:64088953-64088972 | Msa0132830:CDS | 25.0% |
| ! | TGAAACAAGAAAAATTAGCA+TGG | + | chr1_3:64089000-64089019 | None:intergenic | 25.0% |
| ! | GAACAAAATCAAACTAACAT+AGG | - | chr1_3:64089571-64089590 | Msa0132830:CDS | 25.0% |
| !!! | TTTTTCTTGGTTTTCACAAT+TGG | + | chr1_3:64089607-64089626 | None:intergenic | 25.0% |
| TATAAAAACACAGTAGCGAA+TGG | + | chr1_3:64085354-64085373 | None:intergenic | 30.0% | |
| AAAACGAAAATTGCTTTGTG+CGG | + | chr1_3:64085420-64085439 | None:intergenic | 30.0% | |
| GTACGAAATTTGTGTAAAAG+GGG | + | chr1_3:64085495-64085514 | None:intergenic | 30.0% | |
| CGTACGAAATTTGTGTAAAA+GGG | + | chr1_3:64085496-64085515 | None:intergenic | 30.0% | |
| TCGTACGAAATTTGTGTAAA+AGG | + | chr1_3:64085497-64085516 | None:intergenic | 30.0% | |
| GAAAACCCTAATCTCATAAA+TGG | - | chr1_3:64085535-64085554 | Msa0132830:intron | 30.0% | |
| AAACCCTAATCTCATAAATG+GGG | - | chr1_3:64085537-64085556 | Msa0132830:intron | 30.0% | |
| GATGACGATGAATATTCTAT+CGG | - | chr1_3:64085644-64085663 | Msa0132830:intron | 30.0% | |
| ! | TTTCTTACCTTTCTTTTTCC+CGG | + | chr1_3:64085720-64085739 | None:intergenic | 30.0% |
| !!! | GTGAATGAAATTGTTTTTGC+TGG | - | chr1_3:64085812-64085831 | Msa0132830:intron | 30.0% |
| ! | TTTTTGCTGGGAAGAAAAAA+GGG | - | chr1_3:64085825-64085844 | Msa0132830:intron | 30.0% |
| AAAGGGAAATCGAAAAAAAG+TGG | - | chr1_3:64085842-64085861 | Msa0132830:intron | 30.0% | |
| TTCATTGAGTAAAGCTATTC+CGG | - | chr1_3:64086192-64086211 | Msa0132830:intron | 30.0% | |
| ! | GATGTTTCTTTTGCATTTAC+TGG | - | chr1_3:64086277-64086296 | Msa0132830:intron | 30.0% |
| ATATTACCATTGTCAACACT+AGG | + | chr1_3:64086406-64086425 | None:intergenic | 30.0% | |
| !! | GTCTTCGAATCATTTTTCTT+CGG | + | chr1_3:64086796-64086815 | None:intergenic | 30.0% |
| GGCTGAAGAAAAAAAGAAAA+AGG | - | chr1_3:64086885-64086904 | Msa0132830:intron | 30.0% | |
| CCTTTCTTTGTCTGATAAAT+AGG | + | chr1_3:64087168-64087187 | None:intergenic | 30.0% | |
| CCTATTTATCAGACAAAGAA+AGG | - | chr1_3:64087165-64087184 | Msa0132830:CDS | 30.0% | |
| ACAACGAATCGAAATCATAA+TGG | - | chr1_3:64087192-64087211 | Msa0132830:CDS | 30.0% | |
| ATGATGTCAATCTGAATGAT+AGG | - | chr1_3:64087400-64087419 | Msa0132830:CDS | 30.0% | |
| TGATGTCAATCTGAATGATA+GGG | - | chr1_3:64087401-64087420 | Msa0132830:CDS | 30.0% | |
| !!! | TCTTTTTTGACAATTGGTTC+AGG | + | chr1_3:64087459-64087478 | None:intergenic | 30.0% |
| AAGTTTCAAGCATAAATGTC+AGG | + | chr1_3:64087550-64087569 | None:intergenic | 30.0% | |
| ! | CTTGATACCATATCAGTTTT+GGG | - | chr1_3:64087590-64087609 | Msa0132830:intron | 30.0% |
| ATATATTTCCTATGCTAGTG+AGG | + | chr1_3:64087642-64087661 | None:intergenic | 30.0% | |
| TTGTAACCTAATAATGTCAC+CGG | - | chr1_3:64087789-64087808 | Msa0132830:intron | 30.0% | |
| ! | ATTTACTAGTTTATTGCAGC+CGG | + | chr1_3:64087811-64087830 | None:intergenic | 30.0% |
| CAGGTCAATCAAACATTATT+AGG | + | chr1_3:64088065-64088084 | None:intergenic | 30.0% | |
| AATAATGTTTGATTGACCTG+CGG | - | chr1_3:64088065-64088084 | Msa0132830:intron | 30.0% | |
| AGAAACTGAAGATAGAAAAC+AGG | - | chr1_3:64088259-64088278 | Msa0132830:CDS | 30.0% | |
| TGGTTGAGGATAAAAAGAAA+AGG | - | chr1_3:64088291-64088310 | Msa0132830:CDS | 30.0% | |
| TTCAGAATGAGTTCAATATG+AGG | - | chr1_3:64088904-64088923 | Msa0132830:CDS | 30.0% | |
| TCAGAATGAGTTCAATATGA+GGG | - | chr1_3:64088905-64088924 | Msa0132830:CDS | 30.0% | |
| AAAATTGAGCAAGATTGTTC+AGG | + | chr1_3:64089191-64089210 | None:intergenic | 30.0% | |
| !! | ATTAAGAGTACTTTGAGACT+TGG | - | chr1_3:64089347-64089366 | Msa0132830:CDS | 30.0% |
| !! | TTAAGAGTACTTTGAGACTT+GGG | - | chr1_3:64089348-64089367 | Msa0132830:CDS | 30.0% |
| TCAAACTAACATAGGAGTAA+AGG | - | chr1_3:64089579-64089598 | Msa0132830:CDS | 30.0% | |
| AATTGGGATTAAAGTAACAC+TGG | + | chr1_3:64089838-64089857 | None:intergenic | 30.0% | |
| TCACTTAACAGTGTTTGTTT+AGG | - | chr1_3:64089901-64089920 | Msa0132830:CDS | 30.0% | |
| CACTTAACAGTGTTTGTTTA+GGG | - | chr1_3:64089902-64089921 | Msa0132830:CDS | 30.0% | |
| !!! | TTTTTTCCAACTAGGAAAGT+CGG | - | chr1_3:64089952-64089971 | Msa0132830:CDS | 30.0% |
| ! | AATTGTCTCAAAAAGGTGTA+TGG | - | chr1_3:64090014-64090033 | Msa0132830:CDS | 30.0% |
| TTCACTTGAGATCAATGAAA+TGG | - | chr1_3:64090122-64090141 | Msa0132830:CDS | 30.0% | |
| TCACTTGAGATCAATGAAAT+GGG | - | chr1_3:64090123-64090142 | Msa0132830:CDS | 30.0% | |
| TTAACCATTTAATGCAGGAA+AGG | - | chr1_3:64090199-64090218 | Msa0132830:five_prime_UTR | 30.0% | |
| ATTACCTTTCCTGCATTAAA+TGG | + | chr1_3:64090206-64090225 | None:intergenic | 30.0% | |
| !!! | TGCATTTTTCAGCTTGTTAA+AGG | - | chr1_3:64090280-64090299 | Msa0132830:five_prime_UTR | 30.0% |
| TTGCACACGAATATTATACA+TGG | + | chr1_3:64090328-64090347 | None:intergenic | 30.0% | |
| TTTCAATGTAACAGCGAAAG+AGG | + | chr1_3:64085449-64085468 | None:intergenic | 35.0% | |
| CTTCCCCATTTATGAGATTA+GGG | + | chr1_3:64085543-64085562 | None:intergenic | 35.0% | |
| TCTTCCCCATTTATGAGATT+AGG | + | chr1_3:64085544-64085563 | None:intergenic | 35.0% | |
| AAAATCAAAGAAGAAGGCTC+CGG | - | chr1_3:64085616-64085635 | Msa0132830:intron | 35.0% | |
| TATTCATCGTCATCGATAAC+CGG | + | chr1_3:64085638-64085657 | None:intergenic | 35.0% | |
| ! | TTCTTACCTTTCTTTTTCCC+GGG | + | chr1_3:64085719-64085738 | None:intergenic | 35.0% |
| GGGAAAAAGAAAGGTAAGAA+AGG | - | chr1_3:64085719-64085738 | Msa0132830:intron | 35.0% | |
| ! | GTTTTTGCTGGGAAGAAAAA+AGG | - | chr1_3:64085824-64085843 | Msa0132830:intron | 35.0% |
| AAATCGAAAAAAAGTGGTGG+TGG | - | chr1_3:64085848-64085867 | Msa0132830:intron | 35.0% | |
| GCATTAGATGAGAATGATGA+TGG | - | chr1_3:64086064-64086083 | Msa0132830:intron | 35.0% | |
| AGAGGAGAGTAAGAATGAAA+AGG | - | chr1_3:64086090-64086109 | Msa0132830:intron | 35.0% | |
| TGATGAACCAATCACTTTCT+CGG | - | chr1_3:64086126-64086145 | Msa0132830:intron | 35.0% | |
| TGAGTGATGAAATCGAGTTT+GGG | - | chr1_3:64086347-64086366 | Msa0132830:intron | 35.0% | |
| ! | GAGTGAAAGTGTAAATGTTG+TGG | - | chr1_3:64086369-64086388 | Msa0132830:intron | 35.0% |
| ! | TGAAAGTGTAAATGTTGTGG+AGG | - | chr1_3:64086372-64086391 | Msa0132830:intron | 35.0% |
| GGAAAAAGAAAAGGAGAAGA+AGG | - | chr1_3:64086702-64086721 | Msa0132830:intron | 35.0% | |
| TCTTCTACAGCTTCAATTAC+CGG | + | chr1_3:64086754-64086773 | None:intergenic | 35.0% | |
| AAATGATTCGAAGACCAAAG+CGG | - | chr1_3:64086801-64086820 | Msa0132830:CDS | 35.0% | |
| CAGGAAGGTAAATTGTTAAC+TGG | - | chr1_3:64087033-64087052 | Msa0132830:CDS | 35.0% | |
| !! | AGATGAAAGTGTTGAAGCAA+CGG | - | chr1_3:64087233-64087252 | Msa0132830:CDS | 35.0% |
| !! | TACTGCTGATTTAGATTCAG+AGG | - | chr1_3:64087260-64087279 | Msa0132830:CDS | 35.0% |
| ACTACTTCTTCAACAACTTC+AGG | + | chr1_3:64087333-64087352 | None:intergenic | 35.0% | |
| TGAAGTTGTTGAAGAAGTAG+TGG | - | chr1_3:64087332-64087351 | Msa0132830:CDS | 35.0% | |
| ! | ATGATGATGTTGAGGATGAA+TGG | - | chr1_3:64087361-64087380 | Msa0132830:CDS | 35.0% |
| ! | TGATGATGTTGAGGATGAAT+GGG | - | chr1_3:64087362-64087381 | Msa0132830:CDS | 35.0% |
| GATGTCAATCTGAATGATAG+GGG | - | chr1_3:64087402-64087421 | Msa0132830:CDS | 35.0% | |
| !! | AACTCACCAGCATTTTTAGA+AGG | + | chr1_3:64087498-64087517 | None:intergenic | 35.0% |
| ! | TGGTGAGTTTTGCATTCTAT+TGG | - | chr1_3:64087509-64087528 | Msa0132830:intron | 35.0% |
| ! | GCTTGATACCATATCAGTTT+TGG | - | chr1_3:64087589-64087608 | Msa0132830:intron | 35.0% |
| AATAGGACCCAAAACTGATA+TGG | + | chr1_3:64087600-64087619 | None:intergenic | 35.0% | |
| CGAAAAAACCAAGAAGCAAT+AGG | + | chr1_3:64087617-64087636 | None:intergenic | 35.0% | |
| TGGTTTCAAACCTGGAATTA+TGG | - | chr1_3:64087869-64087888 | Msa0132830:intron | 35.0% | |
| TTTATCACTGCCATAATTCC+AGG | + | chr1_3:64087882-64087901 | None:intergenic | 35.0% | |
| ! | TGGCAGTGATAAAATTTTCC+TGG | - | chr1_3:64087889-64087908 | Msa0132830:intron | 35.0% |
| !! | AGTGTTGGCAAATATAAACC+AGG | + | chr1_3:64087910-64087929 | None:intergenic | 35.0% |
| ATACAGGGAGATCTAATACT+TGG | + | chr1_3:64088004-64088023 | None:intergenic | 35.0% | |
| ACTTGACACAGACAAAAGTT+TGG | + | chr1_3:64088040-64088059 | None:intergenic | 35.0% | |
| ! | AAACTTTTGTCTGTGTCAAG+TGG | - | chr1_3:64088039-64088058 | Msa0132830:intron | 35.0% |
| TTTATCCTCAACCACAACTT+TGG | + | chr1_3:64088285-64088304 | None:intergenic | 35.0% | |
| ACGAGTCATTCAATAACTTG+AGG | - | chr1_3:64088588-64088607 | Msa0132830:CDS | 35.0% | |
| CATTCAATAACTTGAGGTCT+CGG | - | chr1_3:64088594-64088613 | Msa0132830:CDS | 35.0% | |
| ATTCAATAACTTGAGGTCTC+GGG | - | chr1_3:64088595-64088614 | Msa0132830:CDS | 35.0% | |
| !! | TGATATTGCAATTTTGGTCG+TGG | - | chr1_3:64088631-64088650 | Msa0132830:CDS | 35.0% |
| TTGAGTGACTCTATAGTTTG+TGG | + | chr1_3:64088677-64088696 | None:intergenic | 35.0% | |
| ! | TGTGTCATTGCTTTACGAAT+TGG | + | chr1_3:64088870-64088889 | None:intergenic | 35.0% |
| GTGATAACACTTACTTTGTG+AGG | - | chr1_3:64089136-64089155 | Msa0132830:CDS | 35.0% | |
| TAAAATTGCGAGTTAATGCG+TGG | + | chr1_3:64089789-64089808 | None:intergenic | 35.0% | |
| CTGTTCTGTCTTGTGAAATT+GGG | + | chr1_3:64089854-64089873 | None:intergenic | 35.0% | |
| !!! | CAGTGCATTTTTTTCCAACT+AGG | - | chr1_3:64089944-64089963 | Msa0132830:CDS | 35.0% |
| ! | TTTTTCCAACTAGGAAAGTC+GGG | - | chr1_3:64089953-64089972 | Msa0132830:CDS | 35.0% |
| GTGAGAGAATTGTCTCAAAA+AGG | - | chr1_3:64090007-64090026 | Msa0132830:CDS | 35.0% | |
| ! | GTCATTTGCATTTTAAGCCA+TGG | - | chr1_3:64090092-64090111 | Msa0132830:CDS | 35.0% |
| CTCAAGTGAAGTTTATTCCA+TGG | + | chr1_3:64090112-64090131 | None:intergenic | 35.0% | |
| AGCGTTTAACCATTTAATGC+AGG | - | chr1_3:64090194-64090213 | Msa0132830:five_prime_UTR | 35.0% | |
| CTGCAATACAATAACAGTAC+AGG | + | chr1_3:64090359-64090378 | None:intergenic | 35.0% | |
| CGGTGGAAAATCAAAGAAGA+AGG | - | chr1_3:64085610-64085629 | Msa0132830:intron | 40.0% | |
| CGATGAATATTCTATCGGAG+TGG | - | chr1_3:64085649-64085668 | Msa0132830:intron | 40.0% | |
| TGAATATTCTATCGGAGTGG+AGG | - | chr1_3:64085652-64085671 | Msa0132830:intron | 40.0% | |
| GGGAAATCGAAAAAAAGTGG+TGG | - | chr1_3:64085845-64085864 | Msa0132830:intron | 40.0% | |
| AGTGTGTTTGCTTCTGGATT+TGG | - | chr1_3:64085884-64085903 | Msa0132830:intron | 40.0% | |
| ! | TGATGATGAAGAGAAATCGG+AGG | - | chr1_3:64085937-64085956 | Msa0132830:intron | 40.0% |
| !! | AACCGGTTGTTAGCTTTACA+GGG | - | chr1_3:64085990-64086009 | Msa0132830:intron | 40.0% |
| TTCCCTGTAAAGCTAACAAC+CGG | + | chr1_3:64085995-64086014 | None:intergenic | 40.0% | |
| !! | TGAGAATGATGATGGAGAAG+AGG | - | chr1_3:64086072-64086091 | Msa0132830:intron | 40.0% |
| GATGAACCAATCACTTTCTC+GGG | - | chr1_3:64086127-64086146 | Msa0132830:intron | 40.0% | |
| TTCTTACCCGAGAAAGTGAT+TGG | + | chr1_3:64086136-64086155 | None:intergenic | 40.0% | |
| ATTGAGTAAAGCTATTCCGG+AGG | - | chr1_3:64086195-64086214 | Msa0132830:intron | 40.0% | |
| TCTGTATCTGAGTCTGCTAA+AGG | - | chr1_3:64086229-64086248 | Msa0132830:intron | 40.0% | |
| ! | TGGTGATGATGAGAAAGATG+AGG | - | chr1_3:64086252-64086271 | Msa0132830:intron | 40.0% |
| CTCGATTTCATCACTCACTT+TGG | + | chr1_3:64086344-64086363 | None:intergenic | 40.0% | |
| GTGAGTGATGAAATCGAGTT+TGG | - | chr1_3:64086346-64086365 | Msa0132830:intron | 40.0% | |
| AGAATAAGAAGAAGAGTGGG+AGG | - | chr1_3:64086470-64086489 | Msa0132830:intron | 40.0% | |
| TGAACTTTATCATCCTGCTG+AGG | + | chr1_3:64086580-64086599 | None:intergenic | 40.0% | |
| !! | AGAAAGTGCCAAAGCATGTT+AGG | - | chr1_3:64086830-64086849 | Msa0132830:CDS | 40.0% |
| !! | GAAAGTGCCAAAGCATGTTA+GGG | - | chr1_3:64086831-64086850 | Msa0132830:CDS | 40.0% |
| ! | ACTACTGGCTAGAAGAAAAG+AGG | - | chr1_3:64086864-64086883 | Msa0132830:CDS | 40.0% |
| GAAGCAAAGGAAAGAAGAAG+AGG | - | chr1_3:64086918-64086937 | Msa0132830:intron | 40.0% | |
| AGAGGCTAAACGTAGAAAGA+AGG | - | chr1_3:64086978-64086997 | Msa0132830:CDS | 40.0% | |
| GAAACTCCTGAAAAAGAAGC+AGG | - | chr1_3:64087014-64087033 | Msa0132830:CDS | 40.0% | |
| ! | TACCTTCCTGCTTCTTTTTC+AGG | + | chr1_3:64087023-64087042 | None:intergenic | 40.0% |
| AGATTCAGAGGAACCTGAAA+AGG | - | chr1_3:64087272-64087291 | Msa0132830:CDS | 40.0% | |
| ACCTGAAAAGGTTGAAGAAG+TGG | - | chr1_3:64087284-64087303 | Msa0132830:CDS | 40.0% | |
| ! | TCCACTTCTTCAACCTTTTC+AGG | + | chr1_3:64087288-64087307 | None:intergenic | 40.0% |
| AAAGGTTGAAGAAGTGGAGA+TGG | - | chr1_3:64087290-64087309 | Msa0132830:CDS | 40.0% | |
| ! | GGATGAAGATGATGATGTTG+AGG | - | chr1_3:64087353-64087372 | Msa0132830:CDS | 40.0% |
| ATGAATGGGATGCAAAAAGC+TGG | - | chr1_3:64087376-64087395 | Msa0132830:CDS | 40.0% | |
| TGAATGGGATGCAAAAAGCT+GGG | - | chr1_3:64087377-64087396 | Msa0132830:CDS | 40.0% | |
| ! | TTTGACAATTGGTTCAGGCT+CGG | + | chr1_3:64087454-64087473 | None:intergenic | 40.0% |
| ! | GGCATACCTTCTAAAAATGC+TGG | - | chr1_3:64087489-64087508 | Msa0132830:intron | 40.0% |
| !! | TTTTGGGTCCTATTGCTTCT+TGG | - | chr1_3:64087606-64087625 | Msa0132830:intron | 40.0% |
| ! | TTTTCGTACCTCACTAGCAT+AGG | - | chr1_3:64087631-64087650 | Msa0132830:intron | 40.0% |
| AAACCAATTGCTGCAGTCAA+AGG | + | chr1_3:64087855-64087874 | None:intergenic | 40.0% | |
| ! | CCTATGCTTATCTGAAGCAA+AGG | + | chr1_3:64087948-64087967 | None:intergenic | 40.0% |
| CCTTTGCTTCAGATAAGCAT+AGG | - | chr1_3:64087945-64087964 | Msa0132830:intron | 40.0% | |
| TAGATCTCCCTGTATCTTGT+AGG | - | chr1_3:64088009-64088028 | Msa0132830:intron | 40.0% | |
| !!! | TTTGCTTTTTCTTCCACAGC+AGG | - | chr1_3:64088200-64088219 | Msa0132830:intron | 40.0% |
| TTTATTTGTAGCACCTGCTG+TGG | + | chr1_3:64088216-64088235 | None:intergenic | 40.0% | |
| TAGAAAACAGGCCAAAGTTG+TGG | - | chr1_3:64088271-64088290 | Msa0132830:CDS | 40.0% | |
| TACCAATGTTCAAGAAGGTG+AGG | - | chr1_3:64088436-64088455 | Msa0132830:CDS | 40.0% | |
| GAACATACGTGAAAGAACCA+AGG | - | chr1_3:64088505-64088524 | Msa0132830:CDS | 40.0% | |
| GTATCAATAACCAGTAGACC+GGG | + | chr1_3:64088560-64088579 | None:intergenic | 40.0% | |
| GGTATCAATAACCAGTAGAC+CGG | + | chr1_3:64088561-64088580 | None:intergenic | 40.0% | |
| TATTGAATGACTCGTGTCCT+GGG | + | chr1_3:64088583-64088602 | None:intergenic | 40.0% | |
| TTATTGAATGACTCGTGTCC+TGG | + | chr1_3:64088584-64088603 | None:intergenic | 40.0% | |
| TTCAATAACTTGAGGTCTCG+GGG | - | chr1_3:64088596-64088615 | Msa0132830:CDS | 40.0% | |
| CACAATGACTTCAGCAAACA+TGG | + | chr1_3:64089662-64089681 | None:intergenic | 40.0% | |
| TCATACGATTTCACGAGCTA+AGG | + | chr1_3:64089764-64089783 | None:intergenic | 40.0% | |
| CCTGTTCTGTCTTGTGAAAT+TGG | + | chr1_3:64089855-64089874 | None:intergenic | 40.0% | |
| CCAATTTCACAAGACAGAAC+AGG | - | chr1_3:64089852-64089871 | Msa0132830:CDS | 40.0% | |
| ACGAAAATTGCTTTGTGCGG+CGG | + | chr1_3:64085417-64085436 | None:intergenic | 45.0% | |
| ATATTCTATCGGAGTGGAGG+AGG | - | chr1_3:64085655-64085674 | Msa0132830:intron | 45.0% | |
| GAGAAACCCGGGAAAAAGAA+AGG | - | chr1_3:64085710-64085729 | Msa0132830:intron | 45.0% | |
| !! | AAAAGTGGTGGTGGTAGTAG+TGG | - | chr1_3:64085857-64085876 | Msa0132830:intron | 45.0% |
| !! | ATTTGGTGTGCTTGGTGATG+AGG | - | chr1_3:64085901-64085920 | Msa0132830:intron | 45.0% |
| GAAGAGAAATCGGAGGTAAC+CGG | - | chr1_3:64085944-64085963 | Msa0132830:intron | 45.0% | |
| !! | GAACCGGTTGTTAGCTTTAC+AGG | - | chr1_3:64085989-64086008 | Msa0132830:intron | 45.0% |
| AGGGAAGAAGAAATCCTCGA+AGG | - | chr1_3:64086009-64086028 | Msa0132830:intron | 45.0% | |
| GGGAAGAAGAAATCCTCGAA+GGG | - | chr1_3:64086010-64086029 | Msa0132830:intron | 45.0% | |
| GTCATCAAAGGGTTCGAAGA+AGG | - | chr1_3:64086162-64086181 | Msa0132830:intron | 45.0% | |
| ACAGAAACACTATCCTCCTC+CGG | + | chr1_3:64086214-64086233 | None:intergenic | 45.0% | |
| GTATCTGAGTCTGCTAAAGG+TGG | - | chr1_3:64086232-64086251 | Msa0132830:intron | 45.0% | |
| !! | GAGAAGCCTAGTGTTGACAA+TGG | - | chr1_3:64086397-64086416 | Msa0132830:intron | 45.0% |
| AGTAAGAGTGAAGAGGTCGT+TGG | - | chr1_3:64086427-64086446 | Msa0132830:intron | 45.0% | |
| ACTTTATCATCCTGCTGAGG+AGG | + | chr1_3:64086577-64086596 | None:intergenic | 45.0% | |
| GCAGGATGATAAAGTTCAGC+CGG | - | chr1_3:64086582-64086601 | Msa0132830:intron | 45.0% | |
| AGAAAAGGAGAAGAAGGCAG+CGG | - | chr1_3:64086708-64086727 | Msa0132830:intron | 45.0% | |
| AGCTGTAGAAGAGAAAGCTG+AGG | - | chr1_3:64086762-64086781 | Msa0132830:CDS | 45.0% | |
| TGCATCTCCCTAACATGCTT+TGG | + | chr1_3:64086841-64086860 | None:intergenic | 45.0% | |
| TAGGGAGATGCAAGAACTAC+TGG | - | chr1_3:64086849-64086868 | Msa0132830:CDS | 45.0% | |
| AGGAAGAGGAAGAGAAGCAA+AGG | - | chr1_3:64086905-64086924 | Msa0132830:intron | 45.0% | |
| GATAGAGGAACTTGAGAGAC+AGG | - | chr1_3:64086951-64086970 | Msa0132830:intron | 45.0% | |
| CTCCTGAAAAAGAAGCAGGA+AGG | - | chr1_3:64087018-64087037 | Msa0132830:CDS | 45.0% | |
| GTAAGCAGAAAGAAGAAGCC+CGG | - | chr1_3:64087055-64087074 | Msa0132830:CDS | 45.0% | |
| AGGCAGATTCTCAATAGCAC+AGG | - | chr1_3:64087096-64087115 | Msa0132830:CDS | 45.0% | |
| GGCAGATTCTCAATAGCACA+GGG | - | chr1_3:64087097-64087116 | Msa0132830:CDS | 45.0% | |
| GCAGATTCTCAATAGCACAG+GGG | - | chr1_3:64087098-64087117 | Msa0132830:CDS | 45.0% | |
| CAGATTCTCAATAGCACAGG+GGG | - | chr1_3:64087099-64087118 | Msa0132830:CDS | 45.0% | |
| TTCATCTGTCTTGACAGCAG+CGG | + | chr1_3:64087220-64087239 | None:intergenic | 45.0% | |
| TTGCAGCCGGTGACATTATT+AGG | + | chr1_3:64087798-64087817 | None:intergenic | 45.0% | |
| GCTGCAGTCAAAGGAAGAAA+GGG | + | chr1_3:64087846-64087865 | None:intergenic | 45.0% | |
| TGCTGCAGTCAAAGGAAGAA+AGG | + | chr1_3:64087847-64087866 | None:intergenic | 45.0% | |
| CTTCCTTTGACTGCAGCAAT+TGG | - | chr1_3:64087849-64087868 | Msa0132830:intron | 45.0% | |
| ! | GCAGCAATTGGTTTCAAACC+TGG | - | chr1_3:64087861-64087880 | Msa0132830:intron | 45.0% |
| CAGGGAGATCTAATACTTGG+TGG | + | chr1_3:64088001-64088020 | None:intergenic | 45.0% | |
| GTTGGATGGGGCATGATATT+TGG | - | chr1_3:64088106-64088125 | Msa0132830:intron | 45.0% | |
| TCTTCAGTTTCTTCAGCTGC+AGG | + | chr1_3:64088251-64088270 | None:intergenic | 45.0% | |
| !! | TCGCCAATTTGCTGCATCAT+GGG | - | chr1_3:64088368-64088387 | Msa0132830:CDS | 45.0% |
| TGACCCATGATGCAGCAAAT+TGG | + | chr1_3:64088374-64088393 | None:intergenic | 45.0% | |
| TCGAATGCAATCCAGAAGCT+TGG | + | chr1_3:64088414-64088433 | None:intergenic | 45.0% | |
| AAGCTTCTGGATTGCATTCG+AGG | - | chr1_3:64088413-64088432 | Msa0132830:CDS | 45.0% | |
| ! | CGAGGTACCAATGTTCAAGA+AGG | - | chr1_3:64088431-64088450 | Msa0132830:CDS | 45.0% |
| AGCCTCACCTTCTTGAACAT+TGG | + | chr1_3:64088441-64088460 | None:intergenic | 45.0% | |
| AATGTTCAAGAAGGTGAGGC+TGG | - | chr1_3:64088440-64088459 | Msa0132830:CDS | 45.0% | |
| ATGTTCAAGAAGGTGAGGCT+GGG | - | chr1_3:64088441-64088460 | Msa0132830:CDS | 45.0% | |
| GTACGTTGCACCAATCTGTT+GGG | + | chr1_3:64088474-64088493 | None:intergenic | 45.0% | |
| AGTACGTTGCACCAATCTGT+TGG | + | chr1_3:64088475-64088494 | None:intergenic | 45.0% | |
| CTTTCACGTATGTTCTCAGC+AGG | + | chr1_3:64088500-64088519 | None:intergenic | 45.0% | |
| TGCATCAGCTTTCAGTTCCT+TGG | + | chr1_3:64088525-64088544 | None:intergenic | 45.0% | |
| GATGCAACACTGAAAGTTCC+CGG | - | chr1_3:64088539-64088558 | Msa0132830:CDS | 45.0% | |
| ! | CTACTGGTTATTGATACCCC+AGG | - | chr1_3:64088563-64088582 | Msa0132830:CDS | 45.0% |
| ATTGAATGACTCGTGTCCTG+GGG | + | chr1_3:64088582-64088601 | None:intergenic | 45.0% | |
| TTGGTCGTGGACATTATGCA+TGG | - | chr1_3:64088644-64088663 | Msa0132830:CDS | 45.0% | |
| ! | TTGCAGGTTGACAGGCTTTA+TGG | - | chr1_3:64088822-64088841 | Msa0132830:CDS | 45.0% |
| AGCAATGACACAGCAGTCTA+AGG | - | chr1_3:64088878-64088897 | Msa0132830:CDS | 45.0% | |
| GTTCAATATGAGGGTCACTC+AGG | - | chr1_3:64088914-64088933 | Msa0132830:CDS | 45.0% | |
| TTTAGATGCCCCTTCACTTC+AGG | + | chr1_3:64089167-64089186 | None:intergenic | 45.0% | |
| !! | TACTTTGAGACTTGGGAGCA+AGG | - | chr1_3:64089355-64089374 | Msa0132830:CDS | 45.0% |
| ACTTCAGCAAACATGGCGTA+GGG | + | chr1_3:64089655-64089674 | None:intergenic | 45.0% | |
| CTAAACCCGACTTTCCTAGT+TGG | + | chr1_3:64089961-64089980 | None:intergenic | 45.0% | |
| !! | GATTTTCCACCGCCTTGTTG+CGG | + | chr1_3:64085602-64085621 | None:intergenic | 50.0% |
| ! | GGTGGAAGTGTGTTTGCTTC+TGG | - | chr1_3:64085878-64085897 | Msa0132830:intron | 50.0% |
| !! | GCTTCTGGATTTGGTGTGCT+TGG | - | chr1_3:64085893-64085912 | Msa0132830:intron | 50.0% |
| AAATCGGAGGTAACCGGTGA+GGG | - | chr1_3:64085950-64085969 | Msa0132830:intron | 50.0% | |
| CGATGACGATGAGGATGAAC+CGG | - | chr1_3:64085973-64085992 | Msa0132830:intron | 50.0% | |
| TCCTCGAAGGGTTCGAAGAA+AGG | - | chr1_3:64086022-64086041 | Msa0132830:intron | 50.0% | |
| CCTCGAAGGGTTCGAAGAAA+GGG | - | chr1_3:64086023-64086042 | Msa0132830:intron | 50.0% | |
| CTCGAAGGGTTCGAAGAAAG+GGG | - | chr1_3:64086024-64086043 | Msa0132830:intron | 50.0% | |
| TCGAAGGGTTCGAAGAAAGG+GGG | - | chr1_3:64086025-64086044 | Msa0132830:intron | 50.0% | |
| TCAAAGGGTTCGAAGAAGGC+AGG | - | chr1_3:64086166-64086185 | Msa0132830:intron | 50.0% | |
| GAGTAAAGCTATTCCGGAGG+AGG | - | chr1_3:64086198-64086217 | Msa0132830:intron | 50.0% | |
| GAGTGGGAGGACTAAAGAAG+AGG | - | chr1_3:64086483-64086502 | Msa0132830:intron | 50.0% | |
| TGGGAGGACTAAAGAAGAGG+AGG | - | chr1_3:64086486-64086505 | Msa0132830:intron | 50.0% | |
| GATAAGCTTCTCGCAGAGCT+TGG | - | chr1_3:64086517-64086536 | Msa0132830:intron | 50.0% | |
| GCAGAACCTACTACAGGAAC+CGG | + | chr1_3:64086604-64086623 | None:intergenic | 50.0% | |
| !! | CTTTTCTCCTGAAGCACCAG+GGG | + | chr1_3:64086626-64086645 | None:intergenic | 50.0% |
| !! | CCTTTTCTCCTGAAGCACCA+GGG | + | chr1_3:64086627-64086646 | None:intergenic | 50.0% |
| !! | TCCTTTTCTCCTGAAGCACC+AGG | + | chr1_3:64086628-64086647 | None:intergenic | 50.0% |
| TGGTGCTTCAGGAGAAAAGG+AGG | - | chr1_3:64086627-64086646 | Msa0132830:intron | 50.0% | |
| GGTGCTTCAGGAGAAAAGGA+GGG | - | chr1_3:64086628-64086647 | Msa0132830:intron | 50.0% | |
| CACTTTCTTGTCAGCCGCTT+TGG | + | chr1_3:64086818-64086837 | None:intergenic | 50.0% | |
| AAGAAGAAGAGGAGCGACGA+AGG | - | chr1_3:64086929-64086948 | Msa0132830:intron | 50.0% | |
| ACTTGAGAGACAGGCAGAAG+AGG | - | chr1_3:64086960-64086979 | Msa0132830:intron | 50.0% | |
| GGTTGAAGAAGTGGAGATGG+AGG | - | chr1_3:64087293-64087312 | Msa0132830:CDS | 50.0% | |
| ATCCAACTAGAGAAGGGGGT+TGG | + | chr1_3:64088093-64088112 | None:intergenic | 50.0% | |
| AACCCCCTTCTCTAGTTGGA+TGG | - | chr1_3:64088092-64088111 | Msa0132830:intron | 50.0% | |
| ACCCCCTTCTCTAGTTGGAT+GGG | - | chr1_3:64088093-64088112 | Msa0132830:intron | 50.0% | |
| TGCCCCATCCAACTAGAGAA+GGG | + | chr1_3:64088099-64088118 | None:intergenic | 50.0% | |
| ATGCCCCATCCAACTAGAGA+AGG | + | chr1_3:64088100-64088119 | None:intergenic | 50.0% | |
| ACAGGCCAAAGTTGTGGTTG+AGG | - | chr1_3:64088277-64088296 | Msa0132830:CDS | 50.0% | |
| TTCACTCGGCTTAGAAGGCA+CGG | + | chr1_3:64088336-64088355 | None:intergenic | 50.0% | |
| TGCCTTCTAAGCCGAGTGAA+GGG | - | chr1_3:64088336-64088355 | Msa0132830:CDS | 50.0% | |
| TTCCCTTCACTCGGCTTAGA+AGG | + | chr1_3:64088341-64088360 | None:intergenic | 50.0% | |
| !! | GTCGCCAATTTGCTGCATCA+TGG | - | chr1_3:64088367-64088386 | Msa0132830:CDS | 50.0% |
| TTGCTGCATCATGGGTCATG+TGG | - | chr1_3:64088376-64088395 | Msa0132830:CDS | 50.0% | |
| ATCATGGGTCATGTGGACAC+TGG | - | chr1_3:64088383-64088402 | Msa0132830:CDS | 50.0% | |
| CACTGGCAAAACCAAGCTTC+TGG | - | chr1_3:64088400-64088419 | Msa0132830:CDS | 50.0% | |
| TGTTCAAGAAGGTGAGGCTG+GGG | - | chr1_3:64088442-64088461 | Msa0132830:CDS | 50.0% | |
| ACTGAAAGTTCCCGGTCTAC+TGG | - | chr1_3:64088547-64088566 | Msa0132830:CDS | 50.0% | |
| CACTGTTCTCGCAACATTGC+AGG | - | chr1_3:64088806-64088825 | Msa0132830:CDS | 50.0% | |
| ! | TCGCAACATTGCAGGTTGAC+AGG | - | chr1_3:64088814-64088833 | Msa0132830:CDS | 50.0% |
| ! | AGGTTGACAGGCTTTATGGC+TGG | - | chr1_3:64088826-64088845 | Msa0132830:CDS | 50.0% |
| TGAGGACCATCCTGAAGTGA+AGG | - | chr1_3:64089154-64089173 | Msa0132830:CDS | 50.0% | |
| GAGGACCATCCTGAAGTGAA+GGG | - | chr1_3:64089155-64089174 | Msa0132830:CDS | 50.0% | |
| AGGACCATCCTGAAGTGAAG+GGG | - | chr1_3:64089156-64089175 | Msa0132830:CDS | 50.0% | |
| GACTTCAGCAAACATGGCGT+AGG | + | chr1_3:64089656-64089675 | None:intergenic | 50.0% | |
| TGCTTTGTGCGGCGGTGAAA+AGG | + | chr1_3:64085409-64085428 | None:intergenic | 55.0% | |
| GGTTTCTCTTCCACCGCAAC+CGG | + | chr1_3:64085698-64085717 | None:intergenic | 55.0% | |
| GTTGCGGTGGAAGAGAAACC+CGG | - | chr1_3:64085698-64085717 | Msa0132830:intron | 55.0% | |
| TTGCGGTGGAAGAGAAACCC+GGG | - | chr1_3:64085699-64085718 | Msa0132830:intron | 55.0% | |
| !! | AGTGGTGGTGGTAGTAGTGG+TGG | - | chr1_3:64085860-64085879 | Msa0132830:intron | 55.0% |
| GAAATCGGAGGTAACCGGTG+AGG | - | chr1_3:64085949-64085968 | Msa0132830:intron | 55.0% | |
| CCCTTTCTTCGAACCCTTCG+AGG | + | chr1_3:64086026-64086045 | None:intergenic | 55.0% | |
| AAGGGTTCGAAGAAGGCAGG+TGG | - | chr1_3:64086169-64086188 | Msa0132830:intron | 55.0% | |
| AGCAGGTTGTGCTGTAGCAG+GGG | + | chr1_3:64086548-64086567 | None:intergenic | 55.0% | |
| CAGCAGGTTGTGCTGTAGCA+GGG | + | chr1_3:64086549-64086568 | None:intergenic | 55.0% | |
| TGCTACAGCACAACCTGCTG+CGG | - | chr1_3:64086549-64086568 | Msa0132830:intron | 55.0% | |
| ! | GTTCAGCCGGTTCCTGTAGT+AGG | - | chr1_3:64086595-64086614 | Msa0132830:intron | 55.0% |
| CCCTGGTGCTTCAGGAGAAA+AGG | - | chr1_3:64086624-64086643 | Msa0132830:intron | 55.0% | |
| AGAGGAGCGACGAAGGATAG+AGG | - | chr1_3:64086936-64086955 | Msa0132830:intron | 55.0% | |
| GAAAGAAGAAGCCCGGCGTT+TGG | - | chr1_3:64087062-64087081 | Msa0132830:CDS | 55.0% | |
| TCCTCATTGCCTCCAAACGC+CGG | + | chr1_3:64087077-64087096 | None:intergenic | 55.0% | |
| CTCCCTGTATCTTGTAGGCG+TGG | - | chr1_3:64088014-64088033 | Msa0132830:intron | 55.0% | |
| GGCCACGCCTACAAGATACA+GGG | + | chr1_3:64088019-64088038 | None:intergenic | 55.0% | |
| TGGCCACGCCTACAAGATAC+AGG | + | chr1_3:64088020-64088039 | None:intergenic | 55.0% | |
| AGCCAACCCCCTTCTCTAGT+TGG | - | chr1_3:64088088-64088107 | Msa0132830:intron | 55.0% | |
| CCCCATCCAACTAGAGAAGG+GGG | + | chr1_3:64088097-64088116 | None:intergenic | 55.0% | |
| CCCCCTTCTCTAGTTGGATG+GGG | - | chr1_3:64088094-64088113 | Msa0132830:intron | 55.0% | |
| GCCCCATCCAACTAGAGAAG+GGG | + | chr1_3:64088098-64088117 | None:intergenic | 55.0% | |
| TCAGCTGCAGGCTTCGTAAC+AGG | + | chr1_3:64088239-64088258 | None:intergenic | 55.0% | |
| GTGCCTTCTAAGCCGAGTGA+AGG | - | chr1_3:64088335-64088354 | Msa0132830:CDS | 55.0% | |
| AGCCGAGTGAAGGGAACCTT+CGG | - | chr1_3:64088345-64088364 | Msa0132830:CDS | 55.0% | |
| GACCGAAGGTTCCCTTCACT+CGG | + | chr1_3:64088350-64088369 | None:intergenic | 55.0% | |
| TGCAGCAAATTGGCGACCGA+AGG | + | chr1_3:64088364-64088383 | None:intergenic | 55.0% | |
| GTTCAAGAAGGTGAGGCTGG+GGG | - | chr1_3:64088443-64088462 | Msa0132830:CDS | 55.0% | |
| !! | GGGGGTATCACCCAACAGAT+TGG | - | chr1_3:64088461-64088480 | Msa0132830:CDS | 55.0% |
| AACTTGAGGTCTCGGGGTTC+AGG | - | chr1_3:64088602-64088621 | Msa0132830:CDS | 55.0% | |
| GATGCCCCTTCACTTCAGGA+TGG | + | chr1_3:64089163-64089182 | None:intergenic | 55.0% | |
| ! | TTCTCGTCGTCGCGGATTGC+TGG | + | chr1_3:64085572-64085591 | None:intergenic | 60.0% |
| GAGAATCCTCCGCCGCAACA+AGG | - | chr1_3:64085587-64085606 | Msa0132830:intron | 60.0% | |
| AATCCTCCGCCGCAACAAGG+CGG | - | chr1_3:64085590-64085609 | Msa0132830:intron | 60.0% | |
| ! | TTTCCACCGCCTTGTTGCGG+CGG | + | chr1_3:64085599-64085618 | None:intergenic | 60.0% |
| !! | GGAGGAGGTGTCAGAGGATG+CGG | - | chr1_3:64085670-64085689 | Msa0132830:intron | 60.0% |
| CTCATCGTCATCGCCCTCAC+CGG | + | chr1_3:64085966-64085985 | None:intergenic | 60.0% | |
| GCAGCAGGTTGTGCTGTAGC+AGG | + | chr1_3:64086550-64086569 | None:intergenic | 60.0% | |
| CCAGGGGCAGAACCTACTAC+AGG | + | chr1_3:64086610-64086629 | None:intergenic | 60.0% | |
| CCTGTAGTAGGTTCTGCCCC+TGG | - | chr1_3:64086607-64086626 | Msa0132830:intron | 60.0% | |
| ! | AGCAGCAGCTGGAAGTGCAC+CGG | - | chr1_3:64086732-64086751 | Msa0132830:intron | 60.0% |
| AGAAGAAGCCCGGCGTTTGG+AGG | - | chr1_3:64087065-64087084 | Msa0132830:CDS | 60.0% | |
| CCTCATTGCCTCCAAACGCC+GGG | + | chr1_3:64087076-64087095 | None:intergenic | 60.0% | |
| GGCGTTTGGAGGCAATGAGG+AGG | - | chr1_3:64087076-64087095 | Msa0132830:CDS | 60.0% | |
| ! | ACAGGGGGCATGACTCTTCC+TGG | - | chr1_3:64087114-64087133 | Msa0132830:CDS | 60.0% |
| ! | GAAGGCACGGCAGACAGTTG+TGG | + | chr1_3:64088323-64088342 | None:intergenic | 60.0% |
| GCGGAGGATTCTCGTCGTCG+CGG | + | chr1_3:64085580-64085599 | None:intergenic | 65.0% | |
| !! | CGGAGTGGAGGAGGTGTCAG+AGG | - | chr1_3:64085664-64085683 | Msa0132830:intron | 65.0% |
| GGTGTCAGAGGATGCGGCTC+CGG | - | chr1_3:64085676-64085695 | Msa0132830:intron | 65.0% | |
| AGAGGATGCGGCTCCGGTTG+CGG | - | chr1_3:64085682-64085701 | Msa0132830:intron | 65.0% | |
| CGGTGAGGGCGATGACGATG+AGG | - | chr1_3:64085964-64085983 | Msa0132830:intron | 65.0% | |
| GGTTCTGCCCCTGGTGCTTC+AGG | - | chr1_3:64086616-64086635 | Msa0132830:intron | 65.0% | |
| CCCGGCGTTTGGAGGCAATG+AGG | - | chr1_3:64087073-64087092 | Msa0132830:CDS | 65.0% | |
| GGGCATGACTCTTCCTGGCG+CGG | - | chr1_3:64087119-64087138 | Msa0132830:CDS | 65.0% | |
| ACTCTTCCTGGCGCGGACAC+TGG | - | chr1_3:64087126-64087145 | Msa0132830:CDS | 65.0% | |
| TGCTGAGGAGGAGCCGCAGC+AGG | + | chr1_3:64086565-64086584 | None:intergenic | 70.0% | |
| TGCTGCGGCTCCTCCTCAGC+AGG | - | chr1_3:64086564-64086583 | Msa0132830:intron | 70.0% | |
| AAGGCAGCGGCAGCAGCAGC+TGG | - | chr1_3:64086721-64086740 | Msa0132830:intron | 70.0% | |
| CTTCCTGGCGCGGACACTGG+TGG | - | chr1_3:64087129-64087148 | Msa0132830:CDS | 70.0% | |
| !! | GAGAAGGGGGTTGGCTCCGC+AGG | + | chr1_3:64088084-64088103 | None:intergenic | 70.0% |
| ! | CCACCGCCTTGTTGCGGCGG+AGG | + | chr1_3:64085596-64085615 | None:intergenic | 75.0% |
| CCTCCGCCGCAACAAGGCGG+TGG | - | chr1_3:64085593-64085612 | Msa0132830:intron | 75.0% | |
| GGATGCGGCTCCGGTTGCGG+TGG | - | chr1_3:64085685-64085704 | Msa0132830:intron | 75.0% | |
| GGTCCACCAGTGTCCGCGCC+AGG | + | chr1_3:64087135-64087154 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 64085323 | 64090397 | 64085323 | ID=Msa0132830;Name=Msa0132830 |
| chr1_3 | mRNA | 64085323 | 64090397 | 64085323 | ID=Msa0132830-mRNA-1;Parent=Msa0132830;Name=Msa0132830-mRNA-1;_AED=0.02;_eAED=0.02;_QI=231|0.66|0.5|0.75|0.66|0.5|4|0|878 |
| chr1_3 | exon | 64085323 | 64085341 | 64085323 | ID=Msa0132830-mRNA-1:exon:21499;Parent=Msa0132830-mRNA-1 |
| chr1_3 | exon | 64086756 | 64086892 | 64086756 | ID=Msa0132830-mRNA-1:exon:21498;Parent=Msa0132830-mRNA-1 |
| chr1_3 | exon | 64086978 | 64087501 | 64086978 | ID=Msa0132830-mRNA-1:exon:21497;Parent=Msa0132830-mRNA-1 |
| chr1_3 | exon | 64088210 | 64090397 | 64088210 | ID=Msa0132830-mRNA-1:exon:21496;Parent=Msa0132830-mRNA-1 |
| chr1_3 | five_prime_UTR | 64090167 | 64090397 | 64090167 | ID=Msa0132830-mRNA-1:five_prime_utr;Parent=Msa0132830-mRNA-1 |
| chr1_3 | CDS | 64088210 | 64090166 | 64088210 | ID=Msa0132830-mRNA-1:cds;Parent=Msa0132830-mRNA-1 |
| chr1_3 | CDS | 64086978 | 64087501 | 64086978 | ID=Msa0132830-mRNA-1:cds;Parent=Msa0132830-mRNA-1 |
| chr1_3 | CDS | 64086756 | 64086892 | 64086756 | ID=Msa0132830-mRNA-1:cds;Parent=Msa0132830-mRNA-1 |
| chr1_3 | CDS | 64085323 | 64085341 | 64085323 | ID=Msa0132830-mRNA-1:cds;Parent=Msa0132830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
