AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0910440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0910440 MtrunA17_Chr6g0463131 95.739 1103 29 1 1 1085 373 1475 0.0 2164
Msa0910440 MtrunA17_Chr6g0472531 83.031 1102 169 1 1 1084 323 1424 0.0 1890
Msa0910440 MtrunA17_Chr6g0463151 83.575 1102 163 1 1 1084 190 1291 0.0 1889
Msa0910440 MtrunA17_Chr6g0463121 82.230 1103 178 1 1 1085 372 1474 0.0 1883
Msa0910440 MtrunA17_Chr6g0471281 83.500 1103 164 1 1 1085 373 1475 0.0 1867
Msa0910440 MtrunA17_Chr6g0463181 81.868 1103 179 2 1 1085 359 1458 0.0 1853
Msa0910440 MtrunA17_Chr6g0463141 78.330 1126 200 2 1 1082 371 1496 0.0 1818
Msa0910440 MtrunA17_Chr6g0463201 73.551 1104 272 3 1 1085 377 1479 0.0 1685
Msa0910440 MtrunA17_Chr6g0463211 70.230 1132 284 4 1 1080 410 1540 0.0 1616
Msa0910440 MtrunA17_Chr8g0341751 48.428 1113 531 9 1 1077 176 1281 0.0 1087
Msa0910440 MtrunA17_Chr8g0341751 25.869 259 175 5 246 490 1041 1296 1.07e-16 85.9
Msa0910440 MtrunA17_Chr8g0341761 48.335 1111 540 8 1 1085 348 1450 0.0 1085
Msa0910440 MtrunA17_Chr8g0359291 79.027 658 117 2 445 1084 1 655 0.0 1075
Msa0910440 MtrunA17_Chr8g0359291 28.507 221 143 3 267 473 427 646 2.34e-13 74.3
Msa0910440 MtrunA17_Chr8g0353781 49.048 1103 531 8 1 1077 351 1448 0.0 1071
Msa0910440 MtrunA17_Chr8g0353781 25.385 260 175 6 246 491 1208 1462 8.29e-16 83.2
Msa0910440 MtrunA17_Chr8g0353541 48.079 1067 521 7 42 1077 1 1065 0.0 1031
Msa0910440 MtrunA17_Chr8g0341851 46.383 1106 560 6 1 1077 357 1458 0.0 1029
Msa0910440 MtrunA17_Chr1g0183191 46.161 1133 544 9 1 1075 396 1520 0.0 1024
Msa0910440 MtrunA17_Chr8g0341811 46.315 1099 528 9 12 1077 200 1269 0.0 1022
Msa0910440 MtrunA17_Chr7g0262191 45.687 1136 555 8 1 1078 392 1523 0.0 1016
Msa0910440 MtrunA17_Chr5g0445741 46.140 1114 552 9 1 1075 383 1487 0.0 1000
Msa0910440 MtrunA17_Chr5g0445671 46.161 1107 538 13 11 1073 2 1094 0.0 989
Msa0910440 MtrunA17_Chr5g0412721 45.601 1114 562 8 1 1075 374 1482 0.0 972
Msa0910440 MtrunA17_Chr3g0101481 43.633 1123 591 6 1 1082 377 1498 0.0 968
Msa0910440 MtrunA17_Chr6g0463391 70.992 655 170 3 445 1080 1 654 0.0 956
Msa0910440 MtrunA17_Chr6g0463391 29.630 216 134 5 247 448 412 623 2.54e-14 77.4
Msa0910440 MtrunA17_Chr8g0337121 44.702 1123 578 7 1 1081 380 1501 0.0 954
Msa0910440 MtrunA17_Chr3g0101471 44.543 1127 560 11 1 1075 183 1296 0.0 952
Msa0910440 MtrunA17_Chr3g0101461 45.035 1128 555 12 1 1075 183 1298 0.0 948
Msa0910440 MtrunA17_Chr8g0337191 44.167 1123 584 6 1 1081 360 1481 0.0 946
Msa0910440 MtrunA17_Chr3g0101441 45.115 1126 557 12 1 1075 183 1298 0.0 940
Msa0910440 MtrunA17_Chr8g0363771 42.124 1111 601 8 1 1075 389 1493 0.0 903
Msa0910440 MtrunA17_Chr2g0295911 41.532 1110 607 7 1 1075 394 1496 0.0 892
Msa0910440 MtrunA17_Chr2g0295901 42.353 1105 602 8 1 1075 394 1493 0.0 879
Msa0910440 MtrunA17_Chr1g0195691 42.318 1113 597 7 1 1075 403 1508 0.0 874
Msa0910440 MtrunA17_Chr2g0295921 42.072 1110 601 8 1 1075 406 1508 0.0 872
Msa0910440 MtrunA17_Chr8g0376961 41.417 1101 614 9 1 1075 339 1434 0.0 848
Msa0910440 MtrunA17_Chr1g0202221 76.394 538 120 3 1 534 373 907 0.0 842
Msa0910440 MtrunA17_Chr1g0202221 74.553 503 81 2 600 1084 907 1380 0.0 758
Msa0910440 MtrunA17_Chr1g0202221 27.092 251 164 5 247 480 1133 1381 1.11e-14 79.3
Msa0910440 MtrunA17_Chr1g0202221 27.519 258 170 9 837 1084 599 849 5.39e-11 67.4
Msa0910440 MtrunA17_Chr3g0085281 40.777 1133 595 18 1 1075 343 1457 0.0 813
Msa0910440 MtrunA17_Chr6g0463401 75.845 414 100 0 1 414 380 793 0.0 660
Msa0910440 MtrunA17_Chr3g0080981 35.177 1103 679 12 2 1073 371 1468 0.0 660
Msa0910440 MtrunA17_Chr3g0080941 35.747 1105 671 14 2 1073 371 1469 0.0 659
Msa0910440 MtrunA17_Chr2g0285731 35.533 1106 674 11 2 1073 371 1471 0.0 642
Msa0910440 MtrunA17_Chr6g0484351 47.641 657 322 4 445 1082 1 654 0.0 598
Msa0910440 MtrunA17_Chr6g0484351 23.616 271 186 5 217 470 378 644 5.73e-15 79.7
Msa0910440 MtrunA17_Chr2g0333911 33.627 1020 616 15 102 1073 1 1007 2.33e-170 527
Msa0910440 MtrunA17_Chr5g0412921 42.587 634 330 8 1 611 368 990 7.76e-155 487
Msa0910440 MtrunA17_Chr5g0412921 22.433 263 170 5 818 1061 574 821 5.43e-12 70.5
Msa0910440 MtrunA17_Chr8g0341801 53.023 430 183 3 674 1085 4 432 1.81e-150 456
Msa0910440 MtrunA17_Chr8g0341801 24.686 239 163 5 246 470 184 419 2.41e-12 70.5
Msa0910440 MtrunA17_Chr6g0484361 49.886 437 218 1 1 436 355 791 5.94e-149 465
Msa0910440 MtrunA17_Chr5g0412941 54.870 308 120 2 793 1081 20 327 2.76e-106 335
Msa0910440 MtrunA17_Chr5g0412941 28.509 228 148 5 267 480 102 328 5.77e-17 83.6
Msa0910440 MtrunA17_Chr8g0341791 46.243 346 170 2 308 639 10 353 2.62e-96 310
Msa0910440 MtrunA17_Chr5g0445701 55.462 238 82 2 862 1075 1 238 7.16e-80 261
Msa0910440 MtrunA17_Chr5g0445701 28.632 234 146 5 267 480 13 245 2.35e-17 83.2
Msa0910440 MtrunA17_Chr8g0341781 42.532 308 168 4 1 304 188 490 2.24e-77 263
Msa0910440 MtrunA17_Chr8g0349441 51.402 214 91 3 205 414 2 206 8.49e-65 218
Msa0910440 MtrunA17_Chr7g0233901 23.330 1093 688 35 61 1053 172 1214 1.52e-59 223
Msa0910440 MtrunA17_Chr7g0233901 29.876 241 149 3 853 1073 353 593 1.57e-31 134
Msa0910440 MtrunA17_Chr7g0233901 24.885 434 272 11 61 460 809 1222 6.72e-25 112
Msa0910440 MtrunA17_Chr7g0264631 23.675 1170 696 37 35 1073 215 1318 5.15e-58 219
Msa0910440 MtrunA17_Chr6g0452111 21.572 1094 743 27 61 1066 183 1249 6.65e-58 218
Msa0910440 MtrunA17_Chr6g0452111 25.843 534 336 19 580 1073 91 604 1.79e-33 140
Msa0910440 MtrunA17_Chr6g0452111 26.180 466 291 14 56 484 819 1268 5.50e-27 119
Msa0910440 MtrunA17_Chr6g0452041 23.958 960 588 32 214 1066 326 1250 1.54e-57 217
Msa0910440 MtrunA17_Chr6g0452041 24.203 533 348 16 578 1073 84 597 5.54e-32 135
Msa0910440 MtrunA17_Chr6g0451881 22.181 1091 736 31 61 1066 176 1238 1.69e-55 211
Msa0910440 MtrunA17_Chr6g0451881 26.711 453 263 14 51 461 809 1234 4.49e-34 142
Msa0910440 MtrunA17_Chr6g0451881 24.953 533 342 18 578 1072 84 596 2.26e-33 140
Msa0910440 MtrunA17_Chr1g0180601 22.986 1179 694 42 35 1073 188 1292 1.05e-53 205
Msa0910440 MtrunA17_Chr6g0453051 23.292 966 596 29 214 1078 328 1249 3.86e-52 200
Msa0910440 MtrunA17_Chr6g0453051 24.083 436 293 9 51 461 811 1233 2.83e-25 114
Msa0910440 MtrunA17_Chr8g0344651 21.713 1156 743 31 29 1073 375 1479 2.28e-50 195
Msa0910440 MtrunA17_Chr8g0344651 22.754 501 346 10 603 1073 344 833 4.60e-29 126
Msa0910440 MtrunA17_Chr8g0344651 30.798 263 165 4 229 475 1222 1483 4.63e-23 106
Msa0910440 MtrunA17_Chr8g0371961 65.421 107 37 0 862 968 7 113 7.25e-40 143
Msa0910440 MtrunA17_Chr5g0412931 42.286 175 99 2 619 792 5 178 2.65e-39 144
Msa0910440 MtrunA17_Chr6g0452061 22.036 776 506 19 364 1066 11 760 2.39e-38 154
Msa0910440 MtrunA17_Chr6g0452061 25.485 412 268 8 78 461 356 756 2.43e-27 119
Msa0910440 MtrunA17_Chr6g0452061 28.571 105 75 0 969 1073 14 118 4.09e-11 67.4
Msa0910440 MtrunA17_Chr6g0486841 29.425 452 268 12 57 476 810 1242 4.88e-37 152
Msa0910440 MtrunA17_Chr6g0486841 23.374 492 330 12 616 1073 117 595 1.44e-27 121
Msa0910440 MtrunA17_Chr6g0486841 31.295 278 164 7 205 462 315 585 1.48e-27 121
Msa0910440 MtrunA17_Chr6g0486841 27.004 237 151 5 853 1068 998 1233 7.72e-23 105
Msa0910440 MtrunA17_Chr4g0061601 24.678 543 367 11 569 1081 101 631 1.09e-34 141
Msa0910440 MtrunA17_Chr4g0061601 24.706 425 285 8 61 460 198 612 3.90e-27 118
Msa0910440 MtrunA17_Chr3g0123411 27.523 436 270 12 54 460 711 1129 1.45e-34 144
Msa0910440 MtrunA17_Chr3g0123411 31.278 227 136 4 872 1078 921 1147 8.36e-29 125
Msa0910440 MtrunA17_Chr3g0123411 31.022 274 171 8 202 460 203 473 4.73e-24 109
Msa0910440 MtrunA17_Chr3g0123411 22.833 473 321 11 614 1053 4 465 2.67e-20 97.4
Msa0910440 MtrunA17_Chr6g0451911 25.000 544 330 17 578 1073 84 597 2.26e-34 143
Msa0910440 MtrunA17_Chr6g0451911 24.601 439 288 10 55 461 814 1241 1.58e-30 130
Msa0910440 MtrunA17_Chr6g0451911 21.707 539 362 13 570 1066 725 1245 1.99e-28 124
Msa0910440 MtrunA17_Chr5g0433051 25.364 481 304 8 608 1054 222 681 3.93e-33 137
Msa0910440 MtrunA17_Chr5g0433051 28.244 262 158 7 234 476 454 704 2.31e-17 87.4
Msa0910440 MtrunA17_Chr1g0194031 24.862 543 342 17 573 1073 102 620 8.33e-33 137
Msa0910440 MtrunA17_Chr1g0194031 28.013 307 191 9 229 510 365 666 3.73e-22 103
Msa0910440 MtrunA17_Chr6g0452171 23.679 549 331 19 578 1073 84 597 1.04e-32 137
Msa0910440 MtrunA17_Chr6g0452171 27.212 452 258 14 56 461 821 1247 2.16e-31 133
Msa0910440 MtrunA17_Chr6g0452171 22.311 502 321 13 609 1066 775 1251 1.15e-27 121
Msa0910440 MtrunA17_Chr6g0452171 31.439 264 160 7 214 460 326 585 2.21e-27 120
Msa0910440 MtrunA17_Chr6g0452141 27.335 439 274 10 56 461 818 1244 1.17e-32 137
Msa0910440 MtrunA17_Chr6g0452141 24.022 537 344 17 578 1073 85 598 2.35e-30 130
Msa0910440 MtrunA17_Chr6g0452141 29.102 323 202 10 159 459 268 585 1.45e-28 124
Msa0910440 MtrunA17_Chr6g0452141 29.730 222 132 4 855 1053 1015 1235 1.57e-26 117
Msa0910440 MtrunA17_Chr5g0433071 26.434 488 290 13 608 1054 224 683 1.54e-32 135
Msa0910440 MtrunA17_Chr5g0433071 22.737 475 317 14 22 469 248 699 1.93e-16 84.7
Msa0910440 MtrunA17_Chr4g0069361 24.112 535 356 15 573 1073 96 614 2.80e-32 136
Msa0910440 MtrunA17_Chr4g0069361 27.817 284 176 4 801 1063 988 1263 6.54e-27 119
Msa0910440 MtrunA17_Chr4g0069361 27.273 352 209 7 167 479 937 1280 6.68e-25 112
Msa0910440 MtrunA17_Chr4g0069361 27.181 298 193 7 229 504 359 654 3.22e-22 103
Msa0910440 MtrunA17_Chr1g0193991 24.404 545 342 17 573 1073 107 625 5.18e-32 135
Msa0910440 MtrunA17_Chr1g0193991 27.236 246 158 3 853 1077 1040 1285 2.76e-28 123
Msa0910440 MtrunA17_Chr1g0193991 28.526 312 189 10 229 513 370 674 2.33e-24 110
Msa0910440 MtrunA17_Chr1g0193991 27.536 345 206 9 167 473 945 1283 9.55e-24 108
Msa0910440 MtrunA17_Chr2g0285191 21.357 501 352 10 604 1073 145 634 5.34e-32 135
Msa0910440 MtrunA17_Chr2g0285191 30.081 246 141 3 853 1072 1049 1289 3.73e-28 123
Msa0910440 MtrunA17_Chr2g0285191 30.522 249 151 6 229 460 379 622 8.70e-22 102
Msa0910440 MtrunA17_Chr2g0285191 28.966 290 180 9 189 460 997 1278 1.39e-20 98.6
Msa0910440 MtrunA17_Chr6g0452071 26.292 445 261 12 61 461 19 440 6.71e-32 130
Msa0910440 MtrunA17_Chr6g0452071 23.953 430 261 12 667 1053 25 431 2.11e-27 117
Msa0910440 MtrunA17_Chr3g0119381 24.248 532 358 16 573 1072 116 634 8.11e-32 135
Msa0910440 MtrunA17_Chr3g0119381 30.172 232 141 3 853 1063 1053 1284 5.01e-26 116
Msa0910440 MtrunA17_Chr3g0119381 26.000 300 189 6 226 499 382 674 1.65e-21 101
Msa0910440 MtrunA17_Chr3g0119381 27.600 250 157 6 243 473 1051 1295 7.35e-21 99.4
Msa0910440 MtrunA17_Chr3g0128381 24.194 558 324 17 585 1073 107 634 8.18e-32 133
Msa0910440 MtrunA17_Chr3g0128381 28.866 291 182 4 191 460 336 622 2.63e-25 112
Msa0910440 MtrunA17_Chr1g0178481 30.380 237 144 1 853 1068 376 612 2.17e-31 131
Msa0910440 MtrunA17_Chr1g0178481 28.197 305 186 8 166 452 308 597 1.95e-22 103
Msa0910440 MtrunA17_Chr4g0069401 22.263 539 361 12 573 1073 91 609 2.72e-31 133
Msa0910440 MtrunA17_Chr4g0069401 28.492 358 197 7 167 479 935 1278 1.98e-28 124
Msa0910440 MtrunA17_Chr4g0069401 25.704 284 182 4 801 1063 986 1261 1.20e-24 111
Msa0910440 MtrunA17_Chr4g0069401 29.675 246 155 6 229 459 354 596 6.02e-23 106
Msa0910440 MtrunA17_Chr4g0069351 23.738 535 358 15 573 1073 96 614 1.86e-30 130
Msa0910440 MtrunA17_Chr4g0069351 28.169 284 175 4 801 1063 988 1263 2.23e-27 120
Msa0910440 MtrunA17_Chr4g0069351 26.989 352 210 7 167 479 937 1280 9.83e-26 115
Msa0910440 MtrunA17_Chr4g0069351 26.510 298 195 6 229 504 359 654 2.01e-23 107
Msa0910440 MtrunA17_Chr4g0039821 23.389 543 350 17 573 1073 94 612 2.30e-30 130
Msa0910440 MtrunA17_Chr4g0039821 28.522 291 178 5 794 1063 980 1261 4.05e-27 119
Msa0910440 MtrunA17_Chr4g0039821 28.254 315 198 7 186 479 971 1278 6.87e-26 115
Msa0910440 MtrunA17_Chr4g0039821 25.163 306 202 7 229 512 357 657 1.96e-20 98.2
Msa0910440 MtrunA17_Chr6g0481921 22.414 522 321 16 604 1073 18 507 7.76e-30 128
Msa0910440 MtrunA17_Chr6g0481921 28.049 246 146 3 853 1072 923 1163 2.52e-27 120
Msa0910440 MtrunA17_Chr6g0481921 24.658 511 323 17 2 473 679 1166 3.24e-25 113
Msa0910440 MtrunA17_Chr6g0481921 28.676 272 168 7 229 479 252 518 1.15e-21 102
Msa0910440 MtrunA17_Chr2g0285311 22.445 548 349 15 573 1073 87 605 1.69e-29 127
Msa0910440 MtrunA17_Chr2g0285311 27.308 260 168 3 834 1072 1002 1261 4.00e-27 119
Msa0910440 MtrunA17_Chr2g0285311 28.247 308 181 9 229 501 350 652 3.47e-21 100
Msa0910440 MtrunA17_Chr2g0285311 25.155 322 209 8 157 460 943 1250 2.88e-20 97.4
Msa0910440 MtrunA17_Chr4g0041871 32.127 221 130 3 853 1053 1002 1222 2.03e-29 127
Msa0910440 MtrunA17_Chr4g0041871 27.215 316 208 7 202 498 297 609 6.83e-29 125
Msa0910440 MtrunA17_Chr4g0041871 24.828 435 287 9 53 461 811 1231 1.93e-27 120
Msa0910440 MtrunA17_Chr4g0041871 30.588 255 152 6 843 1073 329 582 1.36e-25 114
Msa0910440 MtrunA17_Chr2g0285301 21.956 542 362 14 573 1072 77 599 2.27e-29 127
Msa0910440 MtrunA17_Chr2g0285301 29.876 241 148 2 853 1072 1017 1257 9.60e-28 121
Msa0910440 MtrunA17_Chr2g0285301 27.946 297 182 8 243 511 358 650 2.04e-21 101
Msa0910440 MtrunA17_Chr2g0285301 25.000 432 285 13 56 460 826 1245 6.23e-21 99.8
Msa0910440 MtrunA17_Chr1g0156821 30.040 253 155 4 842 1072 977 1229 2.43e-29 127
Msa0910440 MtrunA17_Chr1g0156821 26.195 481 308 16 616 1063 132 598 2.24e-27 120
Msa0910440 MtrunA17_Chr1g0156821 24.510 408 260 11 96 475 847 1234 6.03e-23 106
Msa0910440 MtrunA17_Chr1g0156821 26.667 315 209 7 209 507 333 641 9.65e-15 79.3
Msa0910440 MtrunA17_Chr1g0194001 29.730 222 135 3 853 1053 143 364 3.35e-29 120
Msa0910440 MtrunA17_Chr1g0194001 27.492 331 197 8 167 460 48 372 2.56e-24 106
Msa0910440 MtrunA17_Chr4g0069411 24.015 533 331 17 587 1073 128 632 3.45e-29 126
Msa0910440 MtrunA17_Chr4g0069411 30.180 222 134 3 853 1053 1046 1267 1.33e-26 118
Msa0910440 MtrunA17_Chr4g0069411 28.627 255 162 5 243 480 1044 1295 2.33e-22 104
Msa0910440 MtrunA17_Chr4g0069411 26.502 283 183 5 243 501 390 671 1.58e-20 98.6
Msa0910440 MtrunA17_Chr5g0410921 30.000 240 148 4 853 1072 985 1224 3.62e-29 126
Msa0910440 MtrunA17_Chr5g0410921 25.386 453 272 15 65 465 791 1229 1.45e-26 117
Msa0910440 MtrunA17_Chr5g0410921 24.766 428 274 12 69 462 169 582 1.45e-24 111
Msa0910440 MtrunA17_Chr5g0410921 28.452 239 151 4 855 1073 354 592 2.39e-23 107
Msa0910440 MtrunA17_Chr3g0138211 27.530 247 147 4 853 1073 392 632 1.24e-27 121
Msa0910440 MtrunA17_Chr3g0138211 26.639 244 146 4 853 1063 1022 1265 2.11e-22 104
Msa0910440 MtrunA17_Chr3g0138211 26.506 332 194 6 190 473 947 1276 4.99e-22 103
Msa0910440 MtrunA17_Chr3g0138211 26.298 289 180 9 243 504 390 672 1.27e-19 95.5
Msa0910440 MtrunA17_Chr6g0452081 30.802 237 132 7 825 1040 1 226 1.52e-26 109
Msa0910440 MtrunA17_Chr6g0452081 31.579 228 132 7 229 440 8 227 3.82e-22 96.7
Msa0910440 MtrunA17_Chr5g0412741 25.049 507 318 17 609 1074 210 695 2.11e-26 116
Msa0910440 MtrunA17_Chr5g0412741 27.304 293 186 8 205 476 413 699 2.33e-19 94.0
Msa0910440 MtrunA17_Chr7g0227391 24.951 509 313 17 609 1073 179 662 1.88e-24 110
Msa0910440 MtrunA17_Chr7g0227391 29.960 247 144 6 245 469 421 660 2.67e-21 100
Msa0910440 MtrunA17_Chr7g0222781 26.225 408 256 10 104 473 993 1393 3.17e-24 110
Msa0910440 MtrunA17_Chr7g0222781 21.636 550 361 19 577 1082 874 1397 5.11e-20 96.7
Msa0910440 MtrunA17_Chr7g0222781 25.523 239 156 4 853 1069 402 640 9.10e-17 86.3
Msa0910440 MtrunA17_Chr7g0222781 24.898 245 170 4 243 474 400 643 3.68e-14 77.8
Msa0910440 MtrunA17_Chr8g0393151 32.000 250 144 9 842 1073 11 252 6.29e-24 102
Msa0910440 MtrunA17_Chr8g0393151 25.506 247 144 7 229 459 17 239 1.89e-12 68.6
Msa0910440 MtrunA17_Chr1g0212701 25.499 451 267 13 64 473 963 1385 8.13e-24 108
Msa0910440 MtrunA17_Chr1g0212701 20.947 549 366 18 577 1082 866 1389 2.05e-18 91.7
Msa0910440 MtrunA17_Chr1g0212701 21.218 542 349 16 576 1069 123 634 3.73e-17 87.4
Msa0910440 MtrunA17_Chr1g0212701 22.549 306 220 6 244 535 395 697 1.71e-15 82.0
Msa0910440 MtrunA17_Chr8g0366481 22.610 544 337 17 581 1071 108 620 1.40e-23 107
Msa0910440 MtrunA17_Chr8g0366481 24.891 458 282 14 65 477 188 628 1.54e-18 90.9
Msa0910440 MtrunA17_Chr6g0474071 30.165 242 152 4 247 472 211 451 4.75e-23 103
Msa0910440 MtrunA17_Chr6g0474071 27.230 213 134 1 873 1064 230 442 3.96e-20 94.7
Msa0910440 MtrunA17_Chr3g0128391 27.003 337 170 10 206 469 215 548 2.01e-22 103
Msa0910440 MtrunA17_Chr3g0128391 23.161 367 235 14 633 976 34 376 1.15e-17 88.2
Msa0910440 MtrunA17_Chr4g0014991 38.835 103 62 1 111 212 17 119 4.86e-20 88.6
Msa0910440 MtrunA17_Chr8g0366471 34.579 107 69 1 356 462 8 113 1.18e-16 78.2
Msa0910440 MtrunA17_Chr6g0452051 25.064 391 252 15 579 948 4 374 1.09e-15 80.9
Msa0910440 MtrunA17_Chr2g0316301 28.512 242 139 10 232 454 53 279 2.38e-15 80.9
Msa0910440 MtrunA17_Chr1g0208391 27.619 210 130 7 267 455 94 302 2.05e-13 74.7
Msa0910440 MtrunA17_Chr7g0263351 26.772 254 160 8 235 466 97 346 1.37e-11 68.9
Msa0910440 MtrunA17_Chr8g0384391 26.540 211 131 8 264 454 54 260 2.59e-11 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0910440 AT3G59140.1 70.018 1104 309 3 1 1085 353 1453 0.0 1602
Msa0910440 AT3G21250.4 47.709 1113 552 7 1 1085 356 1466 0.0 1056
Msa0910440 AT3G21250.2 47.709 1113 552 7 1 1085 350 1460 0.0 1055
Msa0910440 AT3G21250.5 47.350 1113 545 8 1 1085 356 1455 0.0 1040
Msa0910440 AT3G21250.1 47.350 1113 545 8 1 1085 350 1449 0.0 1040
Msa0910440 AT1G04120.1 45.343 1138 557 9 1 1078 375 1507 0.0 1003
Msa0910440 AT1G04120.2 45.079 1138 555 10 1 1078 375 1502 0.0 989
Msa0910440 AT3G21250.6 48.115 1008 493 7 106 1085 39 1044 0.0 978
Msa0910440 AT3G21250.3 48.115 1008 493 7 106 1085 39 1044 0.0 978
Msa0910440 AT3G60160.3 45.291 1115 564 8 1 1075 347 1455 0.0 975
Msa0910440 AT3G60160.1 45.291 1115 564 8 1 1075 383 1491 0.0 973
Msa0910440 AT1G04120.3 44.640 1138 530 11 1 1078 375 1472 0.0 967
Msa0910440 AT3G60970.1 44.892 1067 533 7 35 1075 1 1038 0.0 953
Msa0910440 AT3G13080.1 44.356 1125 578 8 1 1082 393 1512 0.0 945
Msa0910440 AT3G13090.1 44.255 1114 590 5 1 1085 354 1465 0.0 936
Msa0910440 AT3G13100.2 43.874 1110 592 6 3 1085 134 1239 0.0 921
Msa0910440 AT3G13080.2 44.173 1107 581 9 1 1082 393 1487 0.0 920
Msa0910440 AT3G13080.5 44.414 1092 559 8 1 1049 393 1479 0.0 920
Msa0910440 AT3G13080.5 29.146 199 127 2 267 452 1286 1483 3.91e-15 81.3
Msa0910440 AT3G13100.1 43.874 1110 592 6 3 1085 379 1484 0.0 919
Msa0910440 AT3G62700.1 42.832 1151 572 14 1 1075 392 1532 0.0 894
Msa0910440 AT2G47800.1 43.455 1123 580 10 1 1075 394 1509 0.0 886
Msa0910440 AT3G60160.2 44.536 970 510 7 1 948 383 1346 0.0 821
Msa0910440 AT1G30400.2 35.475 1105 677 8 2 1073 370 1471 0.0 671
Msa0910440 AT1G30400.1 35.475 1105 677 8 2 1073 370 1471 0.0 671
Msa0910440 AT2G34660.3 35.669 1113 669 12 2 1073 83 1189 0.0 668
Msa0910440 AT2G34660.1 35.669 1113 669 12 2 1073 370 1476 0.0 667
Msa0910440 AT2G34660.2 35.669 1113 669 12 2 1073 370 1476 0.0 667
Msa0910440 AT1G30420.1 34.896 1109 673 10 2 1072 371 1468 0.0 662
Msa0910440 AT1G30410.5 34.865 1110 672 12 2 1072 256 1353 0.0 650
Msa0910440 AT1G30410.1 34.865 1110 672 12 2 1072 374 1471 0.0 650
Msa0910440 AT1G30410.2 34.865 1110 672 12 2 1072 371 1468 0.0 650
Msa0910440 AT1G30410.6 34.865 1110 672 12 2 1072 371 1468 0.0 650
Msa0910440 AT1G30410.4 34.865 1110 672 12 2 1072 371 1468 0.0 650
Msa0910440 AT2G07680.6 31.855 1105 707 12 1 1073 234 1324 2.33e-176 552
Msa0910440 AT2G07680.4 31.855 1105 707 12 1 1073 308 1398 6.07e-176 553
Msa0910440 AT2G07680.1 31.855 1105 707 12 1 1073 311 1401 8.95e-176 553
Msa0910440 AT2G07680.5 31.855 1105 707 12 1 1073 317 1407 1.24e-175 553
Msa0910440 AT1G30410.3 33.678 968 609 11 2 948 371 1326 1.75e-175 551
Msa0910440 AT2G07680.3 31.855 1105 707 12 1 1073 333 1423 2.23e-175 552
Msa0910440 AT3G13080.3 41.365 718 391 7 1 693 393 1105 2.24e-172 536
Msa0910440 AT3G13080.4 41.365 718 391 7 1 693 393 1105 2.24e-172 536
Msa0910440 AT1G30420.2 33.333 711 447 8 2 696 371 1070 1.39e-120 397
Msa0910440 AT2G07680.2 29.433 846 572 9 1 832 333 1167 4.65e-108 365
Msa0910440 AT1G71330.1 40.645 310 163 6 338 626 1 310 1.92e-64 221
Msa0910440 AT4G25960.1 24.444 990 612 30 174 1072 321 1265 2.02e-59 223
Msa0910440 AT4G25960.1 30.159 252 146 5 243 467 1024 1272 2.50e-26 117
Msa0910440 AT4G25960.1 23.978 538 328 15 588 1073 129 637 7.77e-26 116
Msa0910440 AT3G28415.1 24.000 925 605 31 214 1063 303 1204 6.25e-58 219
Msa0910440 AT3G28415.1 26.116 448 269 13 55 460 775 1202 9.09e-31 132
Msa0910440 AT3G28415.1 24.525 526 339 19 587 1073 68 574 9.04e-27 119
Msa0910440 AT3G28415.2 24.108 925 604 29 214 1063 311 1212 6.53e-58 219
Msa0910440 AT3G28415.2 26.116 448 269 13 55 460 783 1210 9.87e-31 132
Msa0910440 AT3G28415.2 23.759 564 370 20 551 1073 38 582 3.52e-26 117
Msa0910440 AT1G10680.1 23.140 1102 685 38 70 1072 179 1217 9.02e-57 215
Msa0910440 AT1G10680.1 24.615 520 343 17 588 1073 93 597 8.40e-26 115
Msa0910440 AT3G28380.1 23.927 932 595 27 214 1063 324 1223 1.78e-55 211
Msa0910440 AT3G28380.1 26.984 441 274 11 55 460 794 1221 5.63e-33 139
Msa0910440 AT3G28380.1 24.913 574 348 21 551 1072 52 594 1.23e-32 138
Msa0910440 AT5G46540.1 23.957 935 589 23 229 1072 338 1241 4.25e-54 207
Msa0910440 AT5G46540.1 22.368 532 363 11 577 1073 77 593 1.89e-31 134
Msa0910440 AT5G46540.1 30.796 289 176 9 189 460 949 1230 1.34e-21 102
Msa0910440 AT3G28390.1 23.226 930 601 26 214 1063 312 1208 4.29e-54 206
Msa0910440 AT3G28390.1 26.364 440 278 11 51 460 783 1206 2.26e-34 143
Msa0910440 AT3G28390.1 24.911 562 366 17 551 1073 39 583 3.41e-31 133
Msa0910440 AT2G47000.6 23.709 949 586 27 229 1073 365 1279 4.77e-54 206
Msa0910440 AT2G47000.6 23.352 531 365 13 573 1073 102 620 4.23e-32 136
Msa0910440 AT2G47000.6 24.070 457 320 9 26 460 816 1267 4.70e-24 110
Msa0910440 AT2G47000.5 23.709 949 586 27 229 1073 365 1279 4.77e-54 206
Msa0910440 AT2G47000.5 23.352 531 365 13 573 1073 102 620 4.23e-32 136
Msa0910440 AT2G47000.5 24.070 457 320 9 26 460 816 1267 4.70e-24 110
Msa0910440 AT2G47000.1 23.709 949 586 27 229 1073 365 1279 4.77e-54 206
Msa0910440 AT2G47000.1 23.352 531 365 13 573 1073 102 620 4.23e-32 136
Msa0910440 AT2G47000.1 24.070 457 320 9 26 460 816 1267 4.70e-24 110
Msa0910440 AT3G28345.1 23.542 926 592 22 221 1063 331 1223 1.22e-53 205
Msa0910440 AT3G28345.1 26.682 446 268 14 56 461 796 1222 2.65e-28 124
Msa0910440 AT3G28345.1 22.883 555 357 16 573 1085 77 602 9.86e-28 122
Msa0910440 AT1G02520.1 23.486 941 593 26 229 1073 362 1271 2.32e-52 201
Msa0910440 AT1G02520.1 25.680 331 205 5 167 460 933 1259 9.29e-23 106
Msa0910440 AT1G02520.2 23.486 941 593 26 229 1073 362 1271 2.32e-52 201
Msa0910440 AT1G02520.2 25.680 331 205 5 167 460 933 1259 9.29e-23 106
Msa0910440 AT1G02520.3 23.486 941 593 26 229 1073 362 1271 2.32e-52 201
Msa0910440 AT1G02520.3 25.680 331 205 5 167 460 933 1259 9.29e-23 106
Msa0910440 AT3G28360.1 22.742 941 594 28 214 1063 311 1209 7.95e-52 199
Msa0910440 AT3G28360.1 25.690 471 296 13 26 460 755 1207 6.08e-33 139
Msa0910440 AT3G28360.1 24.386 570 354 20 551 1069 38 581 9.46e-28 122
Msa0910440 AT4G01820.1 23.586 937 589 26 229 1077 329 1226 2.83e-49 191
Msa0910440 AT4G01820.1 26.496 351 203 8 167 473 885 1224 3.73e-22 103
Msa0910440 AT1G02530.1 23.239 951 591 29 229 1073 349 1266 9.84e-49 189
Msa0910440 AT1G02530.1 25.680 331 205 5 167 460 928 1254 3.34e-23 107
Msa0910440 AT1G10680.2 22.849 1046 645 38 70 1016 179 1161 7.25e-48 187
Msa0910440 AT1G10680.2 24.423 520 344 17 588 1073 93 597 7.43e-26 116
Msa0910440 AT2G47000.2 23.632 804 496 25 229 948 365 1134 1.60e-38 157
Msa0910440 AT2G47000.2 23.352 531 365 13 573 1073 102 620 3.65e-32 136
Msa0910440 AT3G62150.3 23.327 553 373 15 555 1073 104 639 1.47e-34 144
Msa0910440 AT3G62150.3 28.409 264 166 4 835 1077 1032 1293 3.25e-28 124
Msa0910440 AT3G62150.3 30.292 274 168 8 229 484 384 652 4.85e-27 120
Msa0910440 AT3G62150.3 31.197 234 143 6 243 460 1046 1277 6.51e-22 103
Msa0910440 AT3G62150.2 23.327 553 373 15 555 1073 104 639 1.47e-34 144
Msa0910440 AT3G62150.2 28.409 264 166 4 835 1077 1032 1293 3.25e-28 124
Msa0910440 AT3G62150.2 30.292 274 168 8 229 484 384 652 4.85e-27 120
Msa0910440 AT3G62150.2 31.197 234 143 6 243 460 1046 1277 6.51e-22 103
Msa0910440 AT3G62150.1 23.327 553 373 15 555 1073 104 639 1.47e-34 144
Msa0910440 AT3G62150.1 28.409 264 166 4 835 1077 1032 1293 3.25e-28 124
Msa0910440 AT3G62150.1 30.292 274 168 8 229 484 384 652 4.85e-27 120
Msa0910440 AT3G62150.1 31.197 234 143 6 243 460 1046 1277 6.51e-22 103
Msa0910440 AT5G03910.1 34.717 265 149 2 824 1067 366 627 6.64e-34 139
Msa0910440 AT5G03910.1 26.502 283 185 7 188 452 336 613 2.08e-20 97.4
Msa0910440 AT2G47000.3 23.352 531 365 13 573 1073 102 620 2.97e-32 136
Msa0910440 AT2G47000.3 23.415 568 365 18 229 736 365 922 6.38e-24 109
Msa0910440 AT2G47000.7 23.352 531 365 13 573 1073 102 620 2.97e-32 136
Msa0910440 AT2G47000.7 23.415 568 365 18 229 736 365 922 6.38e-24 109
Msa0910440 AT2G47000.4 23.352 531 365 13 573 1073 102 620 3.77e-32 136
Msa0910440 AT2G47000.4 23.415 568 365 18 229 736 365 922 5.33e-24 110
Msa0910440 AT1G27940.2 31.984 247 147 4 836 1063 139 383 4.95e-32 135
Msa0910440 AT1G27940.2 26.778 239 155 3 853 1071 786 1024 1.56e-25 114
Msa0910440 AT1G27940.2 27.397 292 193 4 198 475 743 1029 1.90e-25 114
Msa0910440 AT1G27940.2 28.269 283 182 8 209 474 117 395 1.56e-24 111
Msa0910440 AT5G39040.1 25.391 512 333 12 607 1084 144 640 5.57e-32 134
Msa0910440 AT5G39040.1 28.223 287 179 5 213 479 361 640 2.58e-24 110
Msa0910440 AT1G27940.1 31.984 247 147 4 836 1063 353 597 6.99e-32 135
Msa0910440 AT1G27940.1 24.887 442 297 12 58 474 178 609 8.85e-26 115
Msa0910440 AT1G27940.1 26.275 255 166 4 839 1071 984 1238 2.28e-25 114
Msa0910440 AT1G27940.1 27.397 292 193 4 198 475 957 1243 2.36e-25 114
Msa0910440 AT4G01830.1 23.339 557 333 15 573 1073 71 589 6.67e-31 132
Msa0910440 AT4G01830.1 28.807 243 151 4 853 1073 981 1223 2.59e-26 117
Msa0910440 AT4G01830.1 26.513 347 208 7 167 473 886 1225 1.36e-23 108
Msa0910440 AT4G01830.1 29.555 247 156 6 229 460 334 577 2.88e-21 101
Msa0910440 AT1G28010.1 31.301 246 148 4 837 1063 355 598 1.63e-30 131
Msa0910440 AT1G28010.1 27.099 262 165 4 832 1071 983 1240 5.45e-27 119
Msa0910440 AT1G28010.1 24.558 452 288 12 56 473 177 609 6.04e-27 119
Msa0910440 AT1G28010.1 26.370 292 196 4 198 475 959 1245 1.30e-25 115
Msa0910440 AT4G28620.1 25.523 478 308 11 608 1053 192 653 3.81e-30 128
Msa0910440 AT4G28620.1 25.056 447 287 14 55 469 240 670 1.44e-19 95.1
Msa0910440 AT1G70610.2 23.800 500 333 11 609 1074 28 513 1.12e-29 125
Msa0910440 AT1G70610.2 29.787 235 145 5 245 461 270 502 1.44e-18 90.9
Msa0910440 AT4G28630.1 27.378 347 231 3 727 1053 306 651 1.26e-29 127
Msa0910440 AT4G28630.1 28.163 245 157 5 247 476 435 675 4.86e-18 90.1
Msa0910440 AT4G18050.2 22.898 559 363 12 559 1073 67 601 1.51e-29 128
Msa0910440 AT4G18050.2 28.862 246 154 2 853 1077 999 1244 2.06e-27 121
Msa0910440 AT4G18050.2 26.298 289 193 6 228 498 345 631 6.27e-24 109
Msa0910440 AT4G18050.2 29.496 278 175 8 214 473 968 1242 8.70e-23 106
Msa0910440 AT4G18050.1 22.898 559 363 12 559 1073 57 591 1.53e-29 128
Msa0910440 AT4G18050.1 28.862 246 154 2 853 1077 989 1234 2.12e-27 121
Msa0910440 AT4G18050.1 26.298 289 193 6 228 498 335 621 6.79e-24 109
Msa0910440 AT4G18050.1 29.496 278 175 8 214 473 958 1232 9.04e-23 106
Msa0910440 AT5G58270.1 28.617 311 192 5 770 1056 395 699 2.09e-29 126
Msa0910440 AT5G58270.1 23.958 480 303 18 23 469 260 710 5.67e-18 90.1
Msa0910440 AT2G36910.1 28.897 263 161 7 844 1080 1007 1269 3.76e-29 127
Msa0910440 AT2G36910.1 30.216 278 170 6 200 460 978 1248 2.70e-27 120
Msa0910440 AT2G36910.1 31.633 294 175 7 221 495 343 629 2.63e-26 117
Msa0910440 AT2G36910.1 28.897 263 156 6 834 1073 351 605 7.50e-26 116
Msa0910440 AT3G28860.1 30.290 241 148 3 853 1073 1006 1246 4.23e-29 126
Msa0910440 AT3G28860.1 22.203 572 385 15 214 736 330 890 8.16e-28 122
Msa0910440 AT3G28860.1 28.761 226 131 3 853 1053 361 581 3.75e-25 114
Msa0910440 AT3G28860.1 27.113 284 188 4 192 461 957 1235 2.73e-24 110
Msa0910440 AT1G02530.2 29.046 241 151 4 853 1073 364 604 7.70e-29 125
Msa0910440 AT1G02530.2 22.552 572 366 19 229 736 349 907 2.68e-20 97.8
Msa0910440 AT4G01820.2 22.407 540 361 15 572 1073 65 584 9.06e-29 125
Msa0910440 AT4G01820.2 24.188 554 362 17 229 739 329 867 7.70e-25 112
Msa0910440 AT1G70610.1 23.800 500 333 11 609 1074 209 694 1.11e-28 124
Msa0910440 AT1G70610.1 28.514 249 158 5 245 475 451 697 1.18e-18 92.0
Msa0910440 AT4G01830.2 28.631 241 152 4 853 1073 115 355 6.25e-27 119
Msa0910440 AT4G01830.2 28.807 243 151 4 853 1073 747 989 2.28e-26 117
Msa0910440 AT4G01830.2 26.727 333 198 6 167 460 652 977 1.54e-23 108
Msa0910440 AT4G01830.2 29.555 247 156 6 229 460 100 343 3.44e-21 100
Msa0910440 AT2G39480.2 25.910 467 276 14 48 473 779 1216 1.09e-24 112
Msa0910440 AT2G39480.2 21.107 578 387 17 544 1076 664 1217 1.46e-19 95.5
Msa0910440 AT2G39480.2 25.652 230 149 3 853 1060 228 457 5.37e-18 90.5
Msa0910440 AT2G39480.2 24.898 245 170 4 245 476 228 471 1.53e-14 79.3
Msa0910440 AT2G39480.1 25.910 467 276 14 48 473 959 1396 1.65e-24 112
Msa0910440 AT2G39480.1 21.107 578 387 17 544 1076 844 1397 1.80e-19 95.5
Msa0910440 AT2G39480.1 25.514 243 155 4 853 1073 408 646 6.08e-18 90.5
Msa0910440 AT2G39480.1 24.898 245 170 4 245 476 408 651 1.85e-14 79.0
Msa0910440 AT3G55320.1 25.268 467 279 14 48 473 960 1397 2.51e-23 108
Msa0910440 AT3G55320.1 26.522 230 147 4 853 1060 410 639 1.37e-17 89.4
Msa0910440 AT3G55320.1 24.891 229 148 5 846 1053 1151 1376 6.46e-16 84.0
Msa0910440 AT3G55320.1 23.000 300 214 6 244 529 409 705 1.73e-14 79.3
Msa0910440 AT1G67940.1 31.696 224 130 8 856 1060 28 247 4.49e-21 94.7
Msa0910440 AT1G67940.1 26.230 183 112 4 267 433 45 220 9.50e-13 70.1
Msa0910440 AT4G25450.3 28.033 239 142 3 854 1066 298 532 5.16e-21 99.0
Msa0910440 AT4G25450.3 28.279 244 158 5 247 474 299 541 5.38e-18 89.4
Msa0910440 AT4G25450.1 28.033 239 142 3 854 1066 467 701 1.05e-20 98.6
Msa0910440 AT4G25450.1 28.279 244 158 5 247 474 468 710 4.07e-18 90.5
Msa0910440 AT5G39040.2 23.229 353 252 8 607 948 144 488 1.34e-15 81.6
Msa0910440 AT1G53270.1 26.364 220 132 10 264 459 48 261 1.88e-11 68.6
Msa0910440 AT1G65410.1 26.693 251 125 10 258 463 91 327 6.85e-11 65.9

Find 300 sgRNAs with CRISPR-Local

Find 422 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGATTCTTTGCTTTCTTTA+AGG 0.078242 6_2:-14729932 Msa0910440:five_prime_UTR
TCTTCTTTGTATTGGTTATT+TGG 0.110805 6_2:-14725182 Msa0910440:three_prime_UTR
ATCTTACTGTCCCGTTAAAA+AGG 0.187966 6_2:+14726310 None:intergenic
ATGATGTCTTTCCTCTTAAT+TGG 0.193040 6_2:-14730542 Msa0910440:five_prime_UTR
TCAAAAGTCTTCATTGAAAA+AGG 0.200524 6_2:-14728592 Msa0910440:CDS
TCTTTCATTCCAGGAATTAT+TGG 0.205731 6_2:-14726864 Msa0910440:intron
CTCATCTGATTTGAGCATTA+TGG 0.221907 6_2:-14727468 Msa0910440:CDS
GCCATAACCAATGGATTTCT+AGG 0.234465 6_2:-14730621 Msa0910440:five_prime_UTR
ACCCTCTTAGCAACAATTCT+TGG 0.238889 6_2:-14728866 Msa0910440:CDS
CGGTCAGACTCTCTCAATTT+CGG 0.246292 6_2:+14730078 None:intergenic
TGCATATTGGAATATCTTAT+TGG 0.248067 6_2:+14730654 None:intergenic
CTTATACATATTGATGATAA+TGG 0.253664 6_2:+14730957 None:intergenic
AAGTCTACTTGTAGTTTCTT+TGG 0.260381 6_2:-14727678 Msa0910440:CDS
GCTAAAAGATGGAAAACTTT+TGG 0.262918 6_2:-14730863 Msa0910440:five_prime_UTR
TTGCTGGAGCTGCAACAATT+AGG 0.267435 6_2:-14727144 Msa0910440:CDS
CAAAGGCAGTTATTCTGTTT+GGG 0.273454 6_2:-14725861 Msa0910440:CDS
TGCATTTATCCTTAGGAGTT+TGG 0.273945 6_2:-14730593 Msa0910440:five_prime_UTR
TCATCGATCTGGCCTATTAA+AGG 0.276012 6_2:+14730225 None:intergenic
TGTTCCTTTCTTCTTTGTAT+TGG 0.276570 6_2:-14725190 Msa0910440:three_prime_UTR
CATACAATGTCTTTCTCTTC+TGG 0.278360 6_2:-14729276 Msa0910440:CDS
AGTCTTCGTGCGCCTTTAAT+AGG 0.284732 6_2:-14730237 Msa0910440:five_prime_UTR
ATTGGCATGGCTCTATCTTA+TGG 0.285256 6_2:-14726846 Msa0910440:CDS
AATACCATTGTCTTTGTGAT+AGG 0.287266 6_2:+14729782 None:intergenic
GGTCAGACTCTCTCAATTTC+GGG 0.287521 6_2:+14730079 None:intergenic
TGACGAGGTCCTGGAATTCT+TGG 0.293469 6_2:+14728077 None:intergenic
TTGCCATCGGAGAGAGGTTT+TGG 0.293825 6_2:-14729959 Msa0910440:five_prime_UTR
TATGGCGACCTCACTGAAAT+AGG 0.299080 6_2:-14728552 Msa0910440:CDS
GGAGAAGTTACCAAAATAAA+AGG 0.299689 6_2:-14728845 Msa0910440:CDS
TGCTAAGAGGGTTGATTTGC+CGG 0.304348 6_2:+14728877 None:intergenic
ATGATCAATATGAAGGTTCT+TGG 0.307075 6_2:-14726058 Msa0910440:intron
ACTTCTTAATGCCTTTATAT+TGG 0.308437 6_2:-14729884 Msa0910440:five_prime_UTR
GTTATTTATTTCTACTTTGC+CGG 0.308756 6_2:+14726665 None:intergenic
CATCTTTGCATTTACATGTT+TGG 0.310142 6_2:+14730280 None:intergenic
AGTCTACTTGTAGTTTCTTT+GGG 0.310421 6_2:-14727677 Msa0910440:CDS
TCTTTCTAGTCTGACAGTTT+TGG 0.312591 6_2:-14727393 Msa0910440:CDS
ACAAAGGCAGTTATTCTGTT+TGG 0.313271 6_2:-14725862 Msa0910440:CDS
CCTACGGAACATAAATTTAG+AGG 0.319716 6_2:-14728942 Msa0910440:CDS
TCTCTCTTCATCAAGTTCAT+TGG 0.322888 6_2:+14725455 None:intergenic
CTGGATTCTTGAGTAAGATT+TGG 0.324941 6_2:-14730164 Msa0910440:five_prime_UTR
GTTCTCGTATTCTTTGTTTC+CGG 0.325532 6_2:-14730417 Msa0910440:five_prime_UTR
TCACCTGAGGTGAATGTTCC+AGG 0.331333 6_2:+14726953 None:intergenic
CGGAAACTTACCATCACTTA+TGG 0.332585 6_2:+14725665 None:intergenic
ATATCTTATTGGACTCCAAT+AGG 0.333786 6_2:+14730665 None:intergenic
TGTGCATCAACAGCGCTAAA+TGG 0.334898 6_2:+14728435 None:intergenic
CCTTCGAATTGGCCAGTTGC+CGG 0.335937 6_2:-14726684 Msa0910440:CDS
GGTGATATGGACCAGCTTGC+TGG 0.341920 6_2:+14728116 None:intergenic
CCCAGCGTTTGATTCAGTTT+TGG 0.342191 6_2:-14728246 Msa0910440:intron
GAATGCTGATATATATCTAT+TGG 0.342731 6_2:-14728463 Msa0910440:CDS
GAATCGGAGAATTTCCATTC+TGG 0.347627 6_2:-14729618 Msa0910440:CDS
AATTACAGGTTGAAGTTTAC+GGG 0.347671 6_2:-14728719 Msa0910440:intron
GAATTACAGGTTGAAGTTTA+CGG 0.354617 6_2:-14728720 Msa0910440:intron
TTGGATGTTATATCATTTCC+AGG 0.356866 6_2:-14730330 Msa0910440:five_prime_UTR
TGCTGGAGCTGCAACAATTA+GGG 0.359613 6_2:-14727143 Msa0910440:CDS
AGTCTTCTTTGAGACCCTAT+TGG 0.361447 6_2:-14730680 Msa0910440:five_prime_UTR
AGAGAGAAGAATCGTTGTTC+AGG 0.362240 6_2:-14725439 Msa0910440:CDS
TGGTTGCAAGAACTCTTTCA+TGG 0.364613 6_2:-14730519 Msa0910440:five_prime_UTR
TCTTGAGTAAGATTTGGTTT+TGG 0.367217 6_2:-14730158 Msa0910440:five_prime_UTR
ATTTCTACTTTGCCGGCAAC+TGG 0.371052 6_2:+14726672 None:intergenic
TTATTCTCCAGAAAACCATT+AGG 0.371751 6_2:-14725764 Msa0910440:CDS
AACCTCAAGCCAAGAATTCC+AGG 0.373581 6_2:-14728086 Msa0910440:CDS
CTATTGGTCTTCATGATTTG+AGG 0.376555 6_2:-14726365 Msa0910440:CDS
ATCTGCGAACTCGGCCCTAA+TGG 0.377648 6_2:+14725749 None:intergenic
CATGATTTGAGGTCACGTTT+TGG 0.382536 6_2:-14726354 Msa0910440:CDS
GGCAGAAACTAGCTGCATAT+TGG 0.383543 6_2:+14730641 None:intergenic
CATTGGGAAGGATACTTAGT+AGG 0.388070 6_2:-14727574 Msa0910440:CDS
AACGGACCACTTGTACTTCA+TGG 0.389075 6_2:-14726531 Msa0910440:CDS
ACTCATTCGAGGCAAAACTA+TGG 0.389655 6_2:+14727050 None:intergenic
CTCCAAGAATTGTTGCTAAG+AGG 0.391894 6_2:+14728864 None:intergenic
AGGATATATATTCTTCTTGA+TGG 0.392911 6_2:-14727852 Msa0910440:CDS
ATTGGTATCGTCGGAAGAAC+AGG 0.396420 6_2:-14726477 Msa0910440:CDS
CCCTAGAAATCCATTGGTTA+TGG 0.396449 6_2:+14730620 None:intergenic
TCTTGCAACCACCAATTAAG+AGG 0.396757 6_2:+14730531 None:intergenic
ACTAGCAACACTTGCATCAT+TGG 0.397239 6_2:-14729527 Msa0910440:CDS
AGAAACTACAAGTAGACTTC+TGG 0.397244 6_2:+14727682 None:intergenic
TGTCATTGCGGTGATCATTC+AGG 0.397454 6_2:-14729119 Msa0910440:CDS
GTTACTCCATTTGCCAAGGC+TGG 0.399199 6_2:-14730183 Msa0910440:five_prime_UTR
CAAATATGAAGGTTATGTAT+TGG 0.399337 6_2:-14729839 Msa0910440:five_prime_UTR
GAAAGAGGAGTTAATTTAAG+TGG 0.405470 6_2:-14728528 Msa0910440:CDS
TTATTGAAATTGATCCTTTG+AGG 0.408530 6_2:+14729008 None:intergenic
ATTGTCCCTCGAGGTAGGTT+TGG 0.408982 6_2:-14730349 Msa0910440:five_prime_UTR
ACCCTCGGCAACCAATATAA+AGG 0.412341 6_2:+14729873 None:intergenic
TATTTCCACACTAGACTTGT+TGG 0.412862 6_2:-14729763 Msa0910440:five_prime_UTR
CACTGATTGTTTCTAACCGT+TGG 0.414971 6_2:+14727020 None:intergenic
GGAATAGACATATCATCTAT+TGG 0.415532 6_2:-14726381 Msa0910440:CDS
AATGGAGTAACATGGCTAAC+AGG 0.419317 6_2:+14730195 None:intergenic
GGCACAAGATGAGAGATTAA+AGG 0.421181 6_2:-14729428 Msa0910440:CDS
TAAGTTTATCTATTAGTCTT+CGG 0.421396 6_2:-14730479 Msa0910440:five_prime_UTR
CTTCTGGACCTCGCCGATGT+TGG 0.421433 6_2:-14729260 Msa0910440:CDS
CCTCTAAATTTATGTTCCGT+AGG 0.428137 6_2:+14728942 None:intergenic
TATTCTCCAGAAAACCATTA+GGG 0.430366 6_2:-14725763 Msa0910440:CDS
AAATCTAGAATTAGGTAAGT+AGG 0.431430 6_2:-14725301 Msa0910440:three_prime_UTR
CAGTGCTTTATTTCGTCTTG+TGG 0.432403 6_2:-14726433 Msa0910440:CDS
TTTGAGGAGAAGTAGGGTAT+TGG 0.432579 6_2:-14725829 Msa0910440:CDS
TATCTTATTGGACTCCAATA+GGG 0.436611 6_2:+14730666 None:intergenic
ACAAGATTCCGTGGAACAAC+AGG 0.439375 6_2:-14727972 Msa0910440:CDS
AAAATCGTCCTCCTTCGAAT+TGG 0.442143 6_2:-14726695 Msa0910440:CDS
AACTGTGATGGATTGCAGTA+TGG 0.445007 6_2:-14725694 Msa0910440:CDS
GAGGTTAATAGCTGGTGATA+TGG 0.445964 6_2:+14728103 None:intergenic
TCATTCAAATACTGTATGTA+AGG 0.446896 6_2:+14727881 None:intergenic
AACGAAAGTTTCAAATATGA+AGG 0.447069 6_2:-14729850 Msa0910440:five_prime_UTR
CAAGTATCAGAGCAAACTTA+TGG 0.447204 6_2:-14729452 Msa0910440:CDS
TTTGAAGCAGGGCACAAGAT+TGG 0.450057 6_2:-14726495 Msa0910440:CDS
CTCTAAATTTATGTTCCGTA+GGG 0.451703 6_2:+14728943 None:intergenic
AAGAATCCAGCCTTGGCAAA+TGG 0.451940 6_2:+14730177 None:intergenic
CATGTAGCAGAAACTGTTGC+TGG 0.454073 6_2:-14727160 Msa0910440:CDS
ATGATCACCGCAATGACATC+CGG 0.454846 6_2:+14729124 None:intergenic
TTACTAATGCAATACACAAT+TGG 0.455020 6_2:+14729569 None:intergenic
TGATCAATATGAAGGTTCTT+GGG 0.455372 6_2:-14726057 Msa0910440:intron
TGTGAGCATTGACGAGGTCC+TGG 0.456895 6_2:+14728068 None:intergenic
GACTTTGAGTTGCTTCCCTA+TGG 0.457237 6_2:-14728570 Msa0910440:CDS
GAAGAGGGTTTAAACTCATC+AGG 0.458484 6_2:-14726001 Msa0910440:intron
ATCGTAGATGCTTATAGAAT+CGG 0.459226 6_2:-14729634 Msa0910440:CDS
AACTCTTTCATGGACTAACT+TGG 0.459248 6_2:-14730509 Msa0910440:five_prime_UTR
TTCAGCCTCACGTTTGCAAT+GGG 0.459449 6_2:-14727431 Msa0910440:CDS
CACCGCTGCAGCACTTTGCA+TGG 0.461580 6_2:-14726987 Msa0910440:CDS
CATTCTGGTTTCACCAGACA+TGG 0.463408 6_2:-14729603 Msa0910440:CDS
GGAGAATTGTTGTCCATGTC+TGG 0.463834 6_2:+14729590 None:intergenic
AAGCAAGAAGAAAGAGAGAA+AGG 0.464046 6_2:-14727920 Msa0910440:CDS
GGAAGCTTGTCAAGGAATAC+TGG 0.465644 6_2:-14725418 Msa0910440:CDS
CAAACACCATGGATACAAAC+AGG 0.468657 6_2:-14728678 Msa0910440:CDS
CACCGTACAATCTGCGAACT+CGG 0.470822 6_2:+14725740 None:intergenic
TCCAAGAATTGTTGCTAAGA+GGG 0.472615 6_2:+14728865 None:intergenic
CAACAGGTTAAATTAACAAA+TGG 0.473003 6_2:-14727956 Msa0910440:CDS
CAGGATCAACTTCATCGATC+TGG 0.485718 6_2:+14730214 None:intergenic
AACGAAAAGAAGATGACAAA+GGG 0.486666 6_2:+14727826 None:intergenic
ATGTCTTTCCTCTTAATTGG+TGG 0.486789 6_2:-14730539 Msa0910440:five_prime_UTR
ATTGTACCTGTTTGTATCCA+TGG 0.489351 6_2:+14728672 None:intergenic
ATTGCAAACGTGAGGCTGAA+TGG 0.489579 6_2:+14727434 None:intergenic
GTCAGATATTGCAAAACTCA+TGG 0.493817 6_2:-14727799 Msa0910440:CDS
ATCACATGTACATTTGAAGC+AGG 0.495779 6_2:-14726507 Msa0910440:CDS
TTTCGTCTTGTGGAACCAGC+AGG 0.496280 6_2:-14726423 Msa0910440:CDS
ATACCATTGTCTTTGTGATA+GGG 0.496635 6_2:+14729783 None:intergenic
ACATCCGGGATACTTGTAAT+CGG 0.499531 6_2:+14729139 None:intergenic
CTCTAAAATCCAAACTCCTA+AGG 0.499628 6_2:+14730584 None:intergenic
GTGGCTATCTGTGGAGAAGT+TGG 0.500647 6_2:-14728902 Msa0910440:CDS
CTTGATTGTGGCTATACCAA+TGG 0.501395 6_2:-14727351 Msa0910440:CDS
GTAAATGCAAAGATGTTGAA+AGG 0.503678 6_2:-14730272 Msa0910440:five_prime_UTR
TGTAGATTTCTTAAGAAATG+TGG 0.504582 6_2:-14729335 Msa0910440:CDS
TGTTACGCAGTTGTTGAGGA+TGG 0.505761 6_2:-14725903 Msa0910440:intron
TTTGAAACTTTCGTTACCCT+CGG 0.507324 6_2:+14729858 None:intergenic
CTAAGGAATTGTTTAATGAA+AGG 0.508076 6_2:+14726823 None:intergenic
AACTCTCAAGAACATGGTTG+TGG 0.510322 6_2:-14730449 Msa0910440:five_prime_UTR
GGATACAAACAGGTACAATA+CGG 0.510382 6_2:-14728668 Msa0910440:CDS
AAGAGCAACAAAATTGCTCC+TGG 0.510788 6_2:+14730312 None:intergenic
AGTAGAAATAAATAACTTGA+AGG 0.511606 6_2:-14726658 Msa0910440:intron
CATTAATATCAATGAGATCA+AGG 0.513054 6_2:+14727086 None:intergenic
CTTGGCTTGAGGTTAATAGC+TGG 0.513724 6_2:+14728095 None:intergenic
CTTAAAGAAAGCAAAGAATC+CGG 0.514916 6_2:+14729933 None:intergenic
CTAGTTTCTGCCATAACCAA+TGG 0.515978 6_2:-14730630 Msa0910440:five_prime_UTR
ATTCAGCCTCACGTTTGCAA+TGG 0.516373 6_2:-14727432 Msa0910440:CDS
AATTTGACAGGAATATATCA+TGG 0.517125 6_2:-14728321 Msa0910440:intron
GGCCGAGTTCGCAGATTGTA+CGG 0.518399 6_2:-14725742 Msa0910440:CDS
TATTTCCAGTTGATGTCAGA+GGG 0.518414 6_2:-14728145 Msa0910440:intron
ATTCAAAACTTTAGTTCATG+TGG 0.520016 6_2:+14731004 None:intergenic
GCAGAGATACTACTTTGCCT+TGG 0.520056 6_2:-14727233 Msa0910440:intron
AAAGAACTAATGCGGATGAA+TGG 0.520700 6_2:-14727208 Msa0910440:CDS
GTCCTGGAATTCTTGGCTTG+AGG 0.520949 6_2:+14728084 None:intergenic
TATTTCAGTGAGGTCGCCAT+AGG 0.521065 6_2:+14728554 None:intergenic
TAAATGCAAAGATGTTGAAA+GGG 0.522800 6_2:-14730271 Msa0910440:five_prime_UTR
ACGGACCACTTGTACTTCAT+GGG 0.525346 6_2:-14726530 Msa0910440:CDS
AAATTTATGTTCCGTAGGGT+TGG 0.528067 6_2:+14728947 None:intergenic
AGTGTTGAAGTTGTATGCTT+GGG 0.528597 6_2:-14729377 Msa0910440:CDS
AAAGGCAGTTATTCTGTTTG+GGG 0.532818 6_2:-14725860 Msa0910440:CDS
TTGAATACATTGATGAAGAC+AGG 0.533636 6_2:-14730132 Msa0910440:five_prime_UTR
TTTGCAGTTCTGGTGCATCA+AGG 0.536082 6_2:+14729065 None:intergenic
TGCCTTTATATTGGTTGCCG+AGG 0.536274 6_2:-14729875 Msa0910440:five_prime_UTR
TATATCATGGAAGGACTCAA+AGG 0.537082 6_2:-14728308 Msa0910440:CDS
CGACAAAGCACATAATATAC+CGG 0.537951 6_2:+14730398 None:intergenic
CGAAATTGAGAGAGTCTGAC+CGG 0.539053 6_2:-14730077 Msa0910440:five_prime_UTR
CCATGTTACTCCATTTGCCA+AGG 0.539100 6_2:-14730187 Msa0910440:five_prime_UTR
CAAAAGCCCTAGAAATCCAT+TGG 0.539220 6_2:+14730614 None:intergenic
AATTAAGAGGAAAGACATCA+TGG 0.541094 6_2:+14730544 None:intergenic
AAGACATCGGTGCACGAAAG+AGG 0.541985 6_2:+14727612 None:intergenic
CCGCATTAGTTCTTTCGCCA+AGG 0.543130 6_2:+14727216 None:intergenic
ATAAAGGCATTAAGAAGTAG+AGG 0.543132 6_2:+14729889 None:intergenic
CTCACTGAAATAGGTGAAAG+AGG 0.543383 6_2:-14728543 Msa0910440:CDS
TTGTCGATATCTTATGCAGT+TGG 0.545046 6_2:-14730381 Msa0910440:five_prime_UTR
CCATAACCAATGGATTTCTA+GGG 0.545663 6_2:-14730620 Msa0910440:five_prime_UTR
TGATGAATAGCAACATGGTA+AGG 0.546376 6_2:+14730712 None:intergenic
TGTGTTAATGTTGATAATGA+AGG 0.546418 6_2:-14730822 Msa0910440:five_prime_UTR
TGATCACCGCAATGACATCC+GGG 0.546436 6_2:+14729125 None:intergenic
TCTGCTAGGTTGATTCACTC+TGG 0.547287 6_2:-14729679 Msa0910440:CDS
GCCTTTATATTGGTTGCCGA+GGG 0.547424 6_2:-14729874 Msa0910440:five_prime_UTR
AACAAAGAGAAGCTAAAAGA+TGG 0.547549 6_2:-14730874 Msa0910440:five_prime_UTR
AGACATCGGTGCACGAAAGA+GGG 0.548612 6_2:+14727613 None:intergenic
ACCAAAACTGAATCAAACGC+TGG 0.548928 6_2:+14728245 None:intergenic
CCGGCAACTGGCCAATTCGA+AGG 0.548977 6_2:+14726684 None:intergenic
AAGTGTTGAAGTTGTATGCT+TGG 0.550969 6_2:-14729378 Msa0910440:CDS
TGCTGGTTCTAACGAGCTTG+TGG 0.551064 6_2:-14728038 Msa0910440:CDS
CACCTGAGGTGAATGTTCCA+GGG 0.553482 6_2:+14726954 None:intergenic
ATAACCAATACAAAGAAGAA+AGG 0.553911 6_2:+14725186 None:intergenic
ATCTGTGGAGAAGTTGGCTC+CGG 0.556004 6_2:-14728896 Msa0910440:CDS
GAGAAGTAGGGTATTGGTGT+TGG 0.557108 6_2:-14725823 Msa0910440:CDS
ACATGGTTGATGCATGAAGA+AGG 0.557562 6_2:+14730762 None:intergenic
AGAGGAGTTAATTTAAGTGG+AGG 0.557605 6_2:-14728525 Msa0910440:CDS
ATATCATGGAAGGACTCAAA+GGG 0.559097 6_2:-14728307 Msa0910440:CDS
ATGAAGTACAAGTGGTCCGT+TGG 0.560375 6_2:+14726533 None:intergenic
TTCATGCATCAACCATGTGT+TGG 0.560655 6_2:-14730757 Msa0910440:five_prime_UTR
AGCCTCACGTTTGCAATGGG+AGG 0.561799 6_2:-14727428 Msa0910440:CDS
AGCAACACTTGCATCATTGG+CGG 0.563186 6_2:-14729524 Msa0910440:CDS
GTTGTCCAAGGAAAAGAAGA+GGG 0.565816 6_2:-14726016 Msa0910440:CDS
CAACGAAAAGAAGATGACAA+AGG 0.566852 6_2:+14727825 None:intergenic
GGATGGATCAAACTGGAGCA+TGG 0.566949 6_2:-14725886 Msa0910440:CDS
TAATTTAACCTGTTGTTCCA+CGG 0.567546 6_2:+14727964 None:intergenic
TTGGATCAACCACTCATTCG+AGG 0.568039 6_2:+14727039 None:intergenic
AATGCTCACAAGGAGACTGC+TGG 0.568865 6_2:-14728055 Msa0910440:CDS
CGGTGATCACAGTGGCACAT+AGG 0.568964 6_2:-14725722 Msa0910440:CDS
TCAATTTCAATGTGCTGACG+AGG 0.569083 6_2:+14727753 None:intergenic
ACGAATAACAAATTTCTGCC+CGG 0.572123 6_2:+14730058 None:intergenic
CATTCCAGGAATTATTGGCA+TGG 0.573555 6_2:-14726859 Msa0910440:intron
CGAATGAGTGGTTGATCCAA+CGG 0.573675 6_2:-14727036 Msa0910440:CDS
GATGGATCAAACTGGAGCAT+GGG 0.574563 6_2:-14725885 Msa0910440:CDS
CTTACTCAAGAATCCAGCCT+TGG 0.575301 6_2:+14730170 None:intergenic
CATGTCTGGTGAAACCAGAA+TGG 0.575446 6_2:+14729604 None:intergenic
TTGTTGAGGATGGATCAAAC+TGG 0.575881 6_2:-14725893 Msa0910440:CDS
TGCTTTGATGACAACCTCAA+AGG 0.576577 6_2:-14729022 Msa0910440:CDS
AGTGCTAAATCATAACAGAA+AGG 0.577132 6_2:+14730795 None:intergenic
CAAACTGGAGCATGGGACAA+AGG 0.578101 6_2:-14725878 Msa0910440:CDS
AACCATGCAAAGTGCTGCAG+CGG 0.579830 6_2:+14726985 None:intergenic
ATCGTCGGAAGAACAGGAAG+CGG 0.580012 6_2:-14726471 Msa0910440:CDS
AAAGAATTGTCCCTCGAGGT+AGG 0.580661 6_2:-14730354 Msa0910440:five_prime_UTR
AAATTGTTACGCAGTTGTTG+AGG 0.583004 6_2:-14725907 Msa0910440:intron
TTATTTCCAGTTGATGTCAG+AGG 0.585193 6_2:-14728146 Msa0910440:intron
CATATGTTTCTCAAACACCA+TGG 0.586064 6_2:-14728689 Msa0910440:CDS
ATAACAGAAACTGCTGAGGA+AGG 0.587322 6_2:+14725223 None:intergenic
GATACAAACAGGTACAATAC+GGG 0.587745 6_2:-14728667 Msa0910440:CDS
ATTGGGAAGGATACTTAGTA+GGG 0.588240 6_2:-14727573 Msa0910440:intron
TTGTAATCGGCTCTTGAACA+AGG 0.591190 6_2:+14729152 None:intergenic
GTTGTTCAGGAAGCTTGTCA+AGG 0.591509 6_2:-14725426 Msa0910440:CDS
CAAAACTTTAGTTCATGTGG+AGG 0.594109 6_2:+14731007 None:intergenic
CAAACGTGAGGCTGAATGGA+AGG 0.594296 6_2:+14727438 None:intergenic
AAAAGTCACACAAGATTCCG+TGG 0.594960 6_2:-14727981 Msa0910440:CDS
ATTTCAGTGAGGTCGCCATA+GGG 0.597672 6_2:+14728555 None:intergenic
TCGTCGGAAGAACAGGAAGC+GGG 0.600764 6_2:-14726470 Msa0910440:CDS
GATATTGCAAAACTCATGGA+TGG 0.602400 6_2:-14727795 Msa0910440:CDS
ACGACTCTACACCATTGGGA+AGG 0.605440 6_2:-14727586 Msa0910440:CDS
CAATTTCAATGTGCTGACGA+GGG 0.607855 6_2:+14727754 None:intergenic
CCAAAACTGAATCAAACGCT+GGG 0.609311 6_2:+14728246 None:intergenic
TGAGTCATCATATCAATCAT+CGG 0.609451 6_2:-14730001 Msa0910440:five_prime_UTR
GTGATCCCATGAAGTACAAG+TGG 0.609498 6_2:+14726525 None:intergenic
GCTAGGTTGATTCACTCTGG+TGG 0.610820 6_2:-14729676 Msa0910440:CDS
GAAAGAGAGAAAGGAGACGC+GGG 0.612989 6_2:-14727911 Msa0910440:CDS
CAGTATTTGAATGAGATGAA+AGG 0.613009 6_2:-14727872 Msa0910440:CDS
TGACAGGAATATATCATGGA+AGG 0.613755 6_2:-14728317 Msa0910440:intron
GGGCACAAGATTGGTATCGT+CGG 0.615743 6_2:-14726486 Msa0910440:CDS
CTACTAAGTATCCTTCCCAA+TGG 0.616093 6_2:+14727575 None:intergenic
ATACTGCAATCCATCACAGT+TGG 0.616639 6_2:+14725696 None:intergenic
TATTGATACTGAAATCTGAT+CGG 0.617414 6_2:+14725118 None:intergenic
ATATCTTTGATCATCCATCT+CGG 0.617673 6_2:+14728626 None:intergenic
AAATAAAGCACTGATAAGAG+TGG 0.617834 6_2:+14726443 None:intergenic
TTTCCAGTTGATGTCAGAGG+GGG 0.618188 6_2:-14728143 Msa0910440:intron
AGAGCCGATTACAAGTATCC+CGG 0.619035 6_2:-14729143 Msa0910440:CDS
ATCACATAATATCAGTAGAG+AGG 0.620430 6_2:-14726767 Msa0910440:CDS
TTACCAAAACCTCTCTCCGA+TGG 0.620982 6_2:+14729956 None:intergenic
ACATAGGATACCAACTGTGA+TGG 0.621529 6_2:-14725706 Msa0910440:CDS
CGTCTTGTGGAACCAGCAGG+AGG 0.622298 6_2:-14726420 Msa0910440:CDS
AGTTGTCCAAGGAAAAGAAG+AGG 0.624086 6_2:-14726017 Msa0910440:CDS
AAAACATTACTTGCATGCAA+AGG 0.624111 6_2:+14729196 None:intergenic
CTCTTTCACCTATTTCAGTG+AGG 0.625320 6_2:+14728544 None:intergenic
TACGGCTATCGAATTCTGCT+AGG 0.625388 6_2:-14729693 Msa0910440:CDS
AACATCCAAACCTACCTCGA+GGG 0.625913 6_2:+14730344 None:intergenic
ATGGTTCTAGCCATAAGTGA+TGG 0.626031 6_2:-14725675 Msa0910440:intron
GGACCTCGTCAATGCTCACA+AGG 0.628718 6_2:-14728065 Msa0910440:CDS
AATTTCAATGTGCTGACGAG+GGG 0.629113 6_2:+14727755 None:intergenic
CCTTGGCAAATGGAGTAACA+TGG 0.631514 6_2:+14730187 None:intergenic
CCTTGGCGAAAGAACTAATG+CGG 0.632233 6_2:-14727216 Msa0910440:CDS
TCATTCCAACAAGTCTAGTG+TGG 0.634738 6_2:+14729758 None:intergenic
GCAACTGGCCAATTCGAAGG+AGG 0.634775 6_2:+14726687 None:intergenic
CTCATGGCAAGTCTTGATTG+TGG 0.638082 6_2:-14727363 Msa0910440:CDS
ACCTGAGGTGAATGTTCCAG+GGG 0.638544 6_2:+14726955 None:intergenic
ATATATGCATATAGAAAGTG+AGG 0.642882 6_2:-14726736 Msa0910440:CDS
AGAAAGAGAGAAAGGAGACG+CGG 0.643989 6_2:-14727912 Msa0910440:CDS
ATGCATCAAAGCCAACCCTA+CGG 0.646646 6_2:-14728958 Msa0910440:CDS
CAAAAGAAATGACCAACACA+TGG 0.647854 6_2:+14730745 None:intergenic
CAGTTGCGAGAAGTTGTCCA+AGG 0.650489 6_2:-14726028 Msa0910440:CDS
CAGATACGATACAGATCCAA+CGG 0.652074 6_2:-14726549 Msa0910440:CDS
AATCCCTATCACAAAGACAA+TGG 0.654605 6_2:-14729786 Msa0910440:five_prime_UTR
TAAAACAACTCTCAAGAACA+TGG 0.655654 6_2:-14730455 Msa0910440:five_prime_UTR
AAGAATAACAGAAACTGCTG+AGG 0.656753 6_2:+14725219 None:intergenic
TGCCTCCCATTGCAAACGTG+AGG 0.665886 6_2:+14727426 None:intergenic
TCTCCTTGTGAGCATTGACG+AGG 0.669593 6_2:+14728062 None:intergenic
AAGTATCCCGGATGTCATTG+CGG 0.671756 6_2:-14729131 Msa0910440:CDS
TCACATGTACATTTGAAGCA+GGG 0.673274 6_2:-14726506 Msa0910440:CDS
CCATTTATAAGAAAATACTA+CGG 0.674512 6_2:-14729711 Msa0910440:CDS
GAAATTGAGAGAGTCTGACC+GGG 0.676034 6_2:-14730076 Msa0910440:five_prime_UTR
ATAAATTTAGAGGTTAGACA+TGG 0.695014 6_2:-14728932 Msa0910440:CDS
TAACATCCAAACCTACCTCG+AGG 0.697456 6_2:+14730343 None:intergenic
TACAGGTTGAAGTTTACGGG+CGG 0.699620 6_2:-14728716 Msa0910440:intron
GAAGCAGTAGACACCAACAT+CGG 0.700382 6_2:+14729247 None:intergenic
TATGCATATAGAAAGTGAGG+CGG 0.701329 6_2:-14726733 Msa0910440:CDS
GTATCAGAGCAAACTTATGG+TGG 0.702119 6_2:-14729449 Msa0910440:CDS
AAAGAAAACACTTCAAGACG+AGG 0.702329 6_2:-14730106 Msa0910440:five_prime_UTR
AAACTGAATCAAACGCTGGG+AGG 0.705657 6_2:+14728249 None:intergenic
ATTTCCAGTTGATGTCAGAG+GGG 0.707397 6_2:-14728144 Msa0910440:intron
GTGTTGCTAGTCCAATTGTG+CGG 0.710094 6_2:+14729539 None:intergenic
AAGTAAAGAATTGTCCCTCG+AGG 0.718486 6_2:-14730358 Msa0910440:five_prime_UTR
GATCATGATGAATAGCAACA+TGG 0.724900 6_2:+14730707 None:intergenic
AGTAGACACCAACATCGGCG+AGG 0.741199 6_2:+14729252 None:intergenic
CCTGAGGTGAATGTTCCAGG+GGG 0.754263 6_2:+14726956 None:intergenic
AGATTGTACGGTGATCACAG+TGG 0.779405 6_2:-14725730 Msa0910440:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATCTACAACATTTTTAAAA+TGG + chr6_2:14726778-14726797 None:intergenic 15.0%
!!! ATTTTAGTTTATTTCCTAAT+TGG - chr6_2:14728394-14728413 Msa0910440:intron 15.0%
!!! ATTTTGAATTGAAAATACTA+AGG + chr6_2:14729322-14729341 None:intergenic 15.0%
!!! AATCTTTTTATCTTTTGTTT+TGG - chr6_2:14729899-14729918 Msa0910440:five_prime_UTR 15.0%
!! AATATTATTTAGCATTATGT+TGG - chr6_2:14729947-14729966 Msa0910440:five_prime_UTR 15.0%
!! ATATTATTTAGCATTATGTT+GGG - chr6_2:14729948-14729967 Msa0910440:five_prime_UTR 15.0%
!!! CTTATACATATTGATGATAA+TGG + chr6_2:14725171-14725190 None:intergenic 20.0%
!!! TAAGTTTATCTATTAGTCTT+CGG - chr6_2:14725646-14725665 Msa0910440:intron 20.0%
!!! AATTTGTTATTCGTCATTTT+TGG - chr6_2:14726076-14726095 Msa0910440:intron 20.0%
!!! TTTTATAACAAAGAGTGAAA+TGG + chr6_2:14726312-14726331 None:intergenic 20.0%
!! CCATTTATAAGAAAATACTA+CGG - chr6_2:14726414-14726433 Msa0910440:CDS 20.0%
!!! ATTTTAGTTGCGATATTAAT+CGG - chr6_2:14727364-14727383 Msa0910440:CDS 20.0%
!! GATTATCTATTATGAATTAC+AGG - chr6_2:14727392-14727411 Msa0910440:CDS 20.0%
!!! TTTATTCTTTTGCATTTCAT+AGG + chr6_2:14728605-14728624 None:intergenic 20.0%
!! ACTCATCTTTAAATAATTCT+CGG - chr6_2:14728831-14728850 Msa0910440:intron 20.0%
!! TAAAACACAAAAACACATTA+AGG + chr6_2:14728871-14728890 None:intergenic 20.0%
!! AGTAGAAATAAATAACTTGA+AGG - chr6_2:14729467-14729486 Msa0910440:CDS 20.0%
!! CATGGTAAAAAAAAAATAGT+TGG + chr6_2:14729555-14729574 None:intergenic 20.0%
!!! TTTTATCTTTTGTTTTGGAA+CGG - chr6_2:14729904-14729923 Msa0910440:five_prime_UTR 20.0%
!! TAAAGATAGATAGATTGTAA+GGG + chr6_2:14730020-14730039 None:intergenic 20.0%
!!! AAAAAATGTACTTTTAGCAT+AGG + chr6_2:14730175-14730194 None:intergenic 20.0%
!! TGTTTATTAAATGAGAAAGA+GGG + chr6_2:14730505-14730524 None:intergenic 20.0%
!! ATTCAAAACTTTAGTTCATG+TGG + chr6_2:14725124-14725143 None:intergenic 25.0%
!!! TGATGATAATGGAAGAAAAA+AGG + chr6_2:14725160-14725179 None:intergenic 25.0%
!!! TGTGTTAATGTTGATAATGA+AGG - chr6_2:14725303-14725322 Msa0910440:three_prime_UTR 25.0%
! TGCATATTGGAATATCTTAT+TGG + chr6_2:14725474-14725493 None:intergenic 25.0%
! TAAATGCAAAGATGTTGAAA+GGG - chr6_2:14725854-14725873 Msa0910440:CDS 25.0%
! ACTTCTTAATGCCTTTATAT+TGG - chr6_2:14726241-14726260 Msa0910440:intron 25.0%
! AACGAAAGTTTCAAATATGA+AGG - chr6_2:14726275-14726294 Msa0910440:intron 25.0%
! CAAATATGAAGGTTATGTAT+TGG - chr6_2:14726286-14726305 Msa0910440:intron 25.0%
!! CCGTAGTATTTTCTTATAAA+TGG + chr6_2:14726417-14726436 None:intergenic 25.0%
! TTACTAATGCAATACACAAT+TGG + chr6_2:14726559-14726578 None:intergenic 25.0%
! TGTAGATTTCTTAAGAAATG+TGG - chr6_2:14726790-14726809 Msa0910440:CDS 25.0%
!!! AAGTAATGTTTTCACTTTTG+TGG - chr6_2:14726940-14726959 Msa0910440:intron 25.0%
! TTATTGAAATTGATCCTTTG+AGG + chr6_2:14727120-14727139 None:intergenic 25.0%
!! TAAAATCTGCTAACTTTTCA+TGG - chr6_2:14727137-14727156 Msa0910440:CDS 25.0%
! ATAAATTTAGAGGTTAGACA+TGG - chr6_2:14727193-14727212 Msa0910440:CDS 25.0%
!!! TCTTACGATTCCTTTTATTT+TGG + chr6_2:14727293-14727312 None:intergenic 25.0%
! TGGGAAAATACACTTTATAT+AGG + chr6_2:14727324-14727343 None:intergenic 25.0%
! GACAAAAAAAATCACATAGT+GGG + chr6_2:14727343-14727362 None:intergenic 25.0%
! GATTAATATCGCAACTAAAA+TGG + chr6_2:14727365-14727384 None:intergenic 25.0%
! TCAAAAGTCTTCATTGAAAA+AGG - chr6_2:14727533-14727552 Msa0910440:intron 25.0%
! GAATGCTGATATATATCTAT+TGG - chr6_2:14727662-14727681 Msa0910440:CDS 25.0%
! AATTTGACAGGAATATATCA+TGG - chr6_2:14727804-14727823 Msa0910440:CDS 25.0%
!!! TTTGATTCAGTTTTGGTAAT+TGG - chr6_2:14727886-14727905 Msa0910440:CDS 25.0%
! GCTAATTTATAGCTAAGTTA+TGG - chr6_2:14727938-14727957 Msa0910440:CDS 25.0%
! CAACAGGTTAAATTAACAAA+TGG - chr6_2:14728169-14728188 Msa0910440:intron 25.0%
! TCATTCAAATACTGTATGTA+AGG + chr6_2:14728247-14728266 None:intergenic 25.0%
! AGGATATATATTCTTCTTGA+TGG - chr6_2:14728273-14728292 Msa0910440:CDS 25.0%
! TAACTGATATTTCCATGTTT+AGG - chr6_2:14728633-14728652 Msa0910440:CDS 25.0%
! CATTAATATCAATGAGATCA+AGG + chr6_2:14729042-14729061 None:intergenic 25.0%
!! TCATTTTCTATCTTAATGCA+AGG - chr6_2:14729223-14729242 Msa0910440:CDS 25.0%
! CTAAGGAATTGTTTAATGAA+AGG + chr6_2:14729305-14729324 None:intergenic 25.0%
! ATATATGCATATAGAAAGTG+AGG - chr6_2:14729389-14729408 Msa0910440:CDS 25.0%
!!! GTTATTTATTTCTACTTTGC+CGG + chr6_2:14729463-14729482 None:intergenic 25.0%
! GTAAAGATAGATAGATTGTA+AGG + chr6_2:14730021-14730040 None:intergenic 25.0%
! TTTACTGTTCCATGAAAATA+TGG - chr6_2:14730036-14730055 Msa0910440:five_prime_UTR 25.0%
!! TGAATTAGTCCATATTTTCA+TGG + chr6_2:14730048-14730067 None:intergenic 25.0%
! CTAATTCATGATCAATATGA+AGG - chr6_2:14730060-14730079 Msa0910440:five_prime_UTR 25.0%
!!! AGGTACATTTTTAACTTTCA+TGG - chr6_2:14730144-14730163 Msa0910440:five_prime_UTR 25.0%
! GTGTTTATTAAATGAGAAAG+AGG + chr6_2:14730506-14730525 None:intergenic 25.0%
!! GTGTAGAAAAATCTAGAATT+AGG - chr6_2:14730816-14730835 Msa0910440:five_prime_UTR 25.0%
!! AAATCTAGAATTAGGTAAGT+AGG - chr6_2:14730824-14730843 Msa0910440:five_prime_UTR 25.0%
! ATAACCAATACAAAGAAGAA+AGG + chr6_2:14730942-14730961 None:intergenic 25.0%
!!! TCTTCTTTGTATTGGTTATT+TGG - chr6_2:14730943-14730962 Msa0910440:five_prime_UTR 25.0%
! TATTGATACTGAAATCTGAT+CGG + chr6_2:14731010-14731029 None:intergenic 25.0%
AACAAAGAGAAGCTAAAAGA+TGG - chr6_2:14725251-14725270 Msa0910440:three_prime_UTR 30.0%
! GCTAAAAGATGGAAAACTTT+TGG - chr6_2:14725262-14725281 Msa0910440:three_prime_UTR 30.0%
AGTGCTAAATCATAACAGAA+AGG + chr6_2:14725333-14725352 None:intergenic 30.0%
TATCTTATTGGACTCCAATA+GGG + chr6_2:14725462-14725481 None:intergenic 30.0%
ATATCTTATTGGACTCCAAT+AGG + chr6_2:14725463-14725482 None:intergenic 30.0%
AATTAAGAGGAAAGACATCA+TGG + chr6_2:14725584-14725603 None:intergenic 30.0%
ATGATGTCTTTCCTCTTAAT+TGG - chr6_2:14725583-14725602 Msa0910440:intron 30.0%
TAAAACAACTCTCAAGAACA+TGG - chr6_2:14725670-14725689 Msa0910440:intron 30.0%
TTGGATGTTATATCATTTCC+AGG - chr6_2:14725795-14725814 Msa0910440:CDS 30.0%
CATCTTTGCATTTACATGTT+TGG + chr6_2:14725848-14725867 None:intergenic 30.0%
GTAAATGCAAAGATGTTGAA+AGG - chr6_2:14725853-14725872 Msa0910440:CDS 30.0%
!! TCTTGAGTAAGATTTGGTTT+TGG - chr6_2:14725967-14725986 Msa0910440:intron 30.0%
TTGAATACATTGATGAAGAC+AGG - chr6_2:14725993-14726012 Msa0910440:intron 30.0%
TGAGTCATCATATCAATCAT+CGG - chr6_2:14726124-14726143 Msa0910440:intron 30.0%
!!! CATATCAATCATCGGTTTTA+TGG - chr6_2:14726132-14726151 Msa0910440:intron 30.0%
CTTAAAGAAAGCAAAGAATC+CGG + chr6_2:14726195-14726214 None:intergenic 30.0%
!! ATAAAGGCATTAAGAAGTAG+AGG + chr6_2:14726239-14726258 None:intergenic 30.0%
ATACCATTGTCTTTGTGATA+GGG + chr6_2:14726345-14726364 None:intergenic 30.0%
AATACCATTGTCTTTGTGAT+AGG + chr6_2:14726346-14726365 None:intergenic 30.0%
ATCGTAGATGCTTATAGAAT+CGG - chr6_2:14726491-14726510 Msa0910440:CDS 30.0%
! TTGTGTTGTAATTTTGCTAG+TGG + chr6_2:14726656-14726675 None:intergenic 30.0%
!! TTTTCTAGCATGTTACTTCT+TGG - chr6_2:14726901-14726920 Msa0910440:intron 30.0%
AAAACATTACTTGCATGCAA+AGG + chr6_2:14726932-14726951 None:intergenic 30.0%
CTCTAAATTTATGTTCCGTA+GGG + chr6_2:14727185-14727204 None:intergenic 30.0%
GGAGAAGTTACCAAAATAAA+AGG - chr6_2:14727280-14727299 Msa0910440:intron 30.0%
GGACAAAAAAAATCACATAG+TGG + chr6_2:14727344-14727363 None:intergenic 30.0%
! GAATTACAGGTTGAAGTTTA+CGG - chr6_2:14727405-14727424 Msa0910440:CDS 30.0%
! AATTACAGGTTGAAGTTTAC+GGG - chr6_2:14727406-14727425 Msa0910440:CDS 30.0%
! ATACGGGAAAACATTTTGTT+TGG - chr6_2:14727474-14727493 Msa0910440:intron 30.0%
ATATCTTTGATCATCCATCT+CGG + chr6_2:14727502-14727521 None:intergenic 30.0%
GAAAGAGGAGTTAATTTAAG+TGG - chr6_2:14727597-14727616 Msa0910440:CDS 30.0%
! GTGTCGTATTTTACTAAAGA+CGG - chr6_2:14727775-14727794 Msa0910440:CDS 30.0%
! TAATATGAGTGCTGTAAAAG+AGG + chr6_2:14727913-14727932 None:intergenic 30.0%
TTACAGCACTCATATTAATG+TGG - chr6_2:14727916-14727935 Msa0910440:CDS 30.0%
TAATTTAACCTGTTGTTCCA+CGG + chr6_2:14728164-14728183 None:intergenic 30.0%
CAGTATTTGAATGAGATGAA+AGG - chr6_2:14728253-14728272 Msa0910440:CDS 30.0%
AACGAAAAGAAGATGACAAA+GGG + chr6_2:14728302-14728321 None:intergenic 30.0%
AAGTCTACTTGTAGTTTCTT+TGG - chr6_2:14728447-14728466 Msa0910440:CDS 30.0%
AGTCTACTTGTAGTTTCTTT+GGG - chr6_2:14728448-14728467 Msa0910440:CDS 30.0%
! TCTTTTGCATTTCATAGGAA+GGG + chr6_2:14728600-14728619 None:intergenic 30.0%
! TTCTTTTGCATTTCATAGGA+AGG + chr6_2:14728601-14728620 None:intergenic 30.0%
ATTTCAACATCTTTCATTCC+AGG - chr6_2:14729252-14729271 Msa0910440:CDS 30.0%
TCTTTCATTCCAGGAATTAT+TGG - chr6_2:14729261-14729280 Msa0910440:CDS 30.0%
ATCACATAATATCAGTAGAG+AGG - chr6_2:14729358-14729377 Msa0910440:CDS 30.0%
!! AAATAAAGCACTGATAAGAG+TGG + chr6_2:14729685-14729704 None:intergenic 30.0%
GGAGGAAAAATTATAGTTGA+TGG - chr6_2:14729723-14729742 Msa0910440:CDS 30.0%
GGAATAGACATATCATCTAT+TGG - chr6_2:14729744-14729763 Msa0910440:exon 30.0%
ATGATCAATATGAAGGTTCT+TGG - chr6_2:14730067-14730086 Msa0910440:five_prime_UTR 30.0%
TGATCAATATGAAGGTTCTT+GGG - chr6_2:14730068-14730087 Msa0910440:five_prime_UTR 30.0%
TTATTCTCCAGAAAACCATT+AGG - chr6_2:14730361-14730380 Msa0910440:five_prime_UTR 30.0%
TATTCTCCAGAAAACCATTA+GGG - chr6_2:14730362-14730381 Msa0910440:five_prime_UTR 30.0%
TGTTCCTTTCTTCTTTGTAT+TGG - chr6_2:14730935-14730954 Msa0910440:five_prime_UTR 30.0%
! CAAAACTTTAGTTCATGTGG+AGG + chr6_2:14725121-14725140 None:intergenic 35.0%
!!! AACTTTTGGAGCATGATTTG+TGG - chr6_2:14725276-14725295 Msa0910440:three_prime_UTR 35.0%
CAAAAGAAATGACCAACACA+TGG + chr6_2:14725383-14725402 None:intergenic 35.0%
TGATGAATAGCAACATGGTA+AGG + chr6_2:14725416-14725435 None:intergenic 35.0%
GATCATGATGAATAGCAACA+TGG + chr6_2:14725421-14725440 None:intergenic 35.0%
! CCATAACCAATGGATTTCTA+GGG - chr6_2:14725505-14725524 Msa0910440:intron 35.0%
TGCATTTATCCTTAGGAGTT+TGG - chr6_2:14725532-14725551 Msa0910440:intron 35.0%
!! CTCTAAAATCCAAACTCCTA+AGG + chr6_2:14725544-14725563 None:intergenic 35.0%
! CTTAGGAGTTTGGATTTTAG+AGG - chr6_2:14725542-14725561 Msa0910440:intron 35.0%
ATGTCTTTCCTCTTAATTGG+TGG - chr6_2:14725586-14725605 Msa0910440:intron 35.0%
! AACTCTTTCATGGACTAACT+TGG - chr6_2:14725616-14725635 Msa0910440:intron 35.0%
! GTTCTCGTATTCTTTGTTTC+CGG - chr6_2:14725708-14725727 Msa0910440:CDS 35.0%
CGACAAAGCACATAATATAC+CGG + chr6_2:14725730-14725749 None:intergenic 35.0%
TTGTCGATATCTTATGCAGT+TGG - chr6_2:14725744-14725763 Msa0910440:CDS 35.0%
CTGGATTCTTGAGTAAGATT+TGG - chr6_2:14725961-14725980 Msa0910440:intron 35.0%
!!! TGAGTAAGATTTGGTTTTGG+TGG - chr6_2:14725970-14725989 Msa0910440:intron 35.0%
AAAGAAAACACTTCAAGACG+AGG - chr6_2:14726019-14726038 Msa0910440:CDS 35.0%
ACGAATAACAAATTTCTGCC+CGG + chr6_2:14726070-14726089 None:intergenic 35.0%
!!! GGACAATCATTTTTTGCCAT+CGG - chr6_2:14726153-14726172 Msa0910440:intron 35.0%
CGGATTCTTTGCTTTCTTTA+AGG - chr6_2:14726193-14726212 Msa0910440:intron 35.0%
! TTTGAAACTTTCGTTACCCT+CGG + chr6_2:14726270-14726289 None:intergenic 35.0%
AATCCCTATCACAAAGACAA+TGG - chr6_2:14726339-14726358 Msa0910440:CDS 35.0%
TATTTCCACACTAGACTTGT+TGG - chr6_2:14726362-14726381 Msa0910440:CDS 35.0%
! GTAATTCTTTTCCGCACAAT+TGG - chr6_2:14726575-14726594 Msa0910440:intron 35.0%
CAAGTATCAGAGCAAACTTA+TGG - chr6_2:14726673-14726692 Msa0910440:CDS 35.0%
!! AAGTGTTGAAGTTGTATGCT+TGG - chr6_2:14726747-14726766 Msa0910440:CDS 35.0%
! AGTGTTGAAGTTGTATGCTT+GGG - chr6_2:14726748-14726767 Msa0910440:CDS 35.0%
CATACAATGTCTTTCTCTTC+TGG - chr6_2:14726849-14726868 Msa0910440:CDS 35.0%
! AAGTTTTCACTTTGCAGTTC+TGG + chr6_2:14727073-14727092 None:intergenic 35.0%
! TCTGCTAACTTTTCATGGAA+AGG - chr6_2:14727142-14727161 Msa0910440:CDS 35.0%
AAATTTATGTTCCGTAGGGT+TGG + chr6_2:14727181-14727200 None:intergenic 35.0%
CCTCTAAATTTATGTTCCGT+AGG + chr6_2:14727186-14727205 None:intergenic 35.0%
CCTACGGAACATAAATTTAG+AGG - chr6_2:14727183-14727202 Msa0910440:CDS 35.0%
TCCAAGAATTGTTGCTAAGA+GGG + chr6_2:14727263-14727282 None:intergenic 35.0%
CATATGTTTCTCAAACACCA+TGG - chr6_2:14727436-14727455 Msa0910440:CDS 35.0%
ATTGTACCTGTTTGTATCCA+TGG + chr6_2:14727456-14727475 None:intergenic 35.0%
GGATACAAACAGGTACAATA+CGG - chr6_2:14727457-14727476 Msa0910440:CDS 35.0%
GATACAAACAGGTACAATAC+GGG - chr6_2:14727458-14727477 Msa0910440:CDS 35.0%
AGAGGAGTTAATTTAAGTGG+AGG - chr6_2:14727600-14727619 Msa0910440:CDS 35.0%
TGACAGGAATATATCATGGA+AGG - chr6_2:14727808-14727827 Msa0910440:CDS 35.0%
TATATCATGGAAGGACTCAA+AGG - chr6_2:14727817-14727836 Msa0910440:CDS 35.0%
ATATCATGGAAGGACTCAAA+GGG - chr6_2:14727818-14727837 Msa0910440:CDS 35.0%
! TTATTTCCAGTTGATGTCAG+AGG - chr6_2:14727979-14727998 Msa0910440:CDS 35.0%
! TATTTCCAGTTGATGTCAGA+GGG - chr6_2:14727980-14727999 Msa0910440:CDS 35.0%
AAGCAAGAAGAAAGAGAGAA+AGG - chr6_2:14728205-14728224 Msa0910440:intron 35.0%
CAACGAAAAGAAGATGACAA+AGG + chr6_2:14728303-14728322 None:intergenic 35.0%
GTCAGATATTGCAAAACTCA+TGG - chr6_2:14728326-14728345 Msa0910440:intron 35.0%
GATATTGCAAAACTCATGGA+TGG - chr6_2:14728330-14728349 Msa0910440:intron 35.0%
!! CTACTGAAAAAGCACCAATT+AGG + chr6_2:14728411-14728430 None:intergenic 35.0%
AGAAACTACAAGTAGACTTC+TGG + chr6_2:14728446-14728465 None:intergenic 35.0%
GTAGAGTCGTAAAAAGACAT+CGG + chr6_2:14728529-14728548 None:intergenic 35.0%
! TTTTTACGACTCTACACCAT+TGG - chr6_2:14728534-14728553 Msa0910440:CDS 35.0%
! TTTTACGACTCTACACCATT+GGG - chr6_2:14728535-14728554 Msa0910440:CDS 35.0%
ATTGGGAAGGATACTTAGTA+GGG - chr6_2:14728552-14728571 Msa0910440:CDS 35.0%
AATCAGATGAGACCTAAACA+TGG + chr6_2:14728648-14728667 None:intergenic 35.0%
! CTCATCTGATTTGAGCATTA+TGG - chr6_2:14728657-14728676 Msa0910440:CDS 35.0%
!! TCTTTCTAGTCTGACAGTTT+TGG - chr6_2:14728732-14728751 Msa0910440:intron 35.0%
CGAATTGCAACAAAAACCAT+TGG + chr6_2:14728793-14728812 None:intergenic 35.0%
AAAGAACTAATGCGGATGAA+TGG - chr6_2:14728917-14728936 Msa0910440:CDS 35.0%
TTCGGTTGTTATCATCTCTA+AGG - chr6_2:14729198-14729217 Msa0910440:CDS 35.0%
TATGCATATAGAAAGTGAGG+CGG - chr6_2:14729392-14729411 Msa0910440:CDS 35.0%
! ATCACATGTACATTTGAAGC+AGG - chr6_2:14729618-14729637 Msa0910440:CDS 35.0%
! TCACATGTACATTTGAAGCA+GGG - chr6_2:14729619-14729638 Msa0910440:CDS 35.0%
! ACTATAATTTTTCCTCCTGC+TGG + chr6_2:14729720-14729739 None:intergenic 35.0%
!! CTATTGGTCTTCATGATTTG+AGG - chr6_2:14729760-14729779 Msa0910440:exon 35.0%
!! ACGTTTTGGTATTATACCTC+AGG - chr6_2:14729785-14729804 Msa0910440:five_prime_UTR 35.0%
TCTTACTGTCCCGTTAAAAA+GGG + chr6_2:14729817-14729836 None:intergenic 35.0%
ATCTTACTGTCCCGTTAAAA+AGG + chr6_2:14729818-14729837 None:intergenic 35.0%
CGGGACAGTAAGATATAATT+TGG - chr6_2:14729824-14729843 Msa0910440:five_prime_UTR 35.0%
GATCAGTGTGTTGAGATAAA+GGG + chr6_2:14729851-14729870 None:intergenic 35.0%
TGATCAGTGTGTTGAGATAA+AGG + chr6_2:14729852-14729871 None:intergenic 35.0%
AACACACTGATCAAGAGATA+TGG - chr6_2:14729859-14729878 Msa0910440:five_prime_UTR 35.0%
ACACACTGATCAAGAGATAT+GGG - chr6_2:14729860-14729879 Msa0910440:five_prime_UTR 35.0%
ATTTAGCATTATGTTGGGAG+TGG - chr6_2:14729953-14729972 Msa0910440:five_prime_UTR 35.0%
TTTAGCATTATGTTGGGAGT+GGG - chr6_2:14729954-14729973 Msa0910440:five_prime_UTR 35.0%
GATAGATTGTAAGGGAGTTA+AGG + chr6_2:14730012-14730031 None:intergenic 35.0%
! TTAAACCCTCTTCTTTTCCT+TGG + chr6_2:14730117-14730136 None:intergenic 35.0%
AAATTGTTACGCAGTTGTTG+AGG - chr6_2:14730218-14730237 Msa0910440:five_prime_UTR 35.0%
ACAAAGGCAGTTATTCTGTT+TGG - chr6_2:14730263-14730282 Msa0910440:five_prime_UTR 35.0%
CAAAGGCAGTTATTCTGTTT+GGG - chr6_2:14730264-14730283 Msa0910440:five_prime_UTR 35.0%
AAAGGCAGTTATTCTGTTTG+GGG - chr6_2:14730265-14730284 Msa0910440:five_prime_UTR 35.0%
ATGTTCATGATGCGTAATCA+TGG - chr6_2:14730538-14730557 Msa0910440:five_prime_UTR 35.0%
TTTCCTGAAAACACAGTCAA+TGG + chr6_2:14730631-14730650 None:intergenic 35.0%
!! GACTGTGTTTTCAGGAAAAT+TGG - chr6_2:14730633-14730652 Msa0910440:five_prime_UTR 35.0%
!! TGTGTTTTCAGGAAAATTGG+CGG - chr6_2:14730636-14730655 Msa0910440:five_prime_UTR 35.0%
TCTCTCTTCATCAAGTTCAT+TGG + chr6_2:14730673-14730692 None:intergenic 35.0%
! TCTGAATTTTGTCGAAATCG+TGG - chr6_2:14730855-14730874 Msa0910440:five_prime_UTR 35.0%
! CTGAATTTTGTCGAAATCGT+GGG - chr6_2:14730856-14730875 Msa0910440:five_prime_UTR 35.0%
AAGAATAACAGAAACTGCTG+AGG + chr6_2:14730909-14730928 None:intergenic 35.0%
! ACATGGTTGATGCATGAAGA+AGG + chr6_2:14725366-14725385 None:intergenic 40.0%
TTCATGCATCAACCATGTGT+TGG - chr6_2:14725368-14725387 Msa0910440:three_prime_UTR 40.0%
!! AGTCTTCTTTGAGACCCTAT+TGG - chr6_2:14725445-14725464 Msa0910440:CDS 40.0%
CTAGTTTCTGCCATAACCAA+TGG - chr6_2:14725495-14725514 Msa0910440:intron 40.0%
! GCCATAACCAATGGATTTCT+AGG - chr6_2:14725504-14725523 Msa0910440:intron 40.0%
! CCCTAGAAATCCATTGGTTA+TGG + chr6_2:14725508-14725527 None:intergenic 40.0%
CAAAAGCCCTAGAAATCCAT+TGG + chr6_2:14725514-14725533 None:intergenic 40.0%
! GGGCTTTTGCATTTATCCTT+AGG - chr6_2:14725525-14725544 Msa0910440:intron 40.0%
TCTTGCAACCACCAATTAAG+AGG + chr6_2:14725597-14725616 None:intergenic 40.0%
TGGTTGCAAGAACTCTTTCA+TGG - chr6_2:14725606-14725625 Msa0910440:intron 40.0%
AACTCTCAAGAACATGGTTG+TGG - chr6_2:14725676-14725695 Msa0910440:CDS 40.0%
AAGTAAAGAATTGTCCCTCG+AGG - chr6_2:14725767-14725786 Msa0910440:CDS 40.0%
AAGAGCAACAAAATTGCTCC+TGG + chr6_2:14725816-14725835 None:intergenic 40.0%
TCATCGATCTGGCCTATTAA+AGG + chr6_2:14725903-14725922 None:intergenic 40.0%
AATGGAGTAACATGGCTAAC+AGG + chr6_2:14725933-14725952 None:intergenic 40.0%
TCATTCCAACAAGTCTAGTG+TGG + chr6_2:14726370-14726389 None:intergenic 40.0%
GAATCGGAGAATTTCCATTC+TGG - chr6_2:14726507-14726526 Msa0910440:CDS 40.0%
ACTAGCAACACTTGCATCAT+TGG - chr6_2:14726598-14726617 Msa0910440:intron 40.0%
GTATCAGAGCAAACTTATGG+TGG - chr6_2:14726676-14726695 Msa0910440:CDS 40.0%
GGCACAAGATGAGAGATTAA+AGG - chr6_2:14726697-14726716 Msa0910440:CDS 40.0%
! TTGTAATCGGCTCTTGAACA+AGG + chr6_2:14726976-14726995 None:intergenic 40.0%
ACATCCGGGATACTTGTAAT+CGG + chr6_2:14726989-14727008 None:intergenic 40.0%
! TGCTTTGATGACAACCTCAA+AGG - chr6_2:14727103-14727122 Msa0910440:CDS 40.0%
ACCCTCTTAGCAACAATTCT+TGG - chr6_2:14727259-14727278 Msa0910440:intron 40.0%
CTCCAAGAATTGTTGCTAAG+AGG + chr6_2:14727264-14727283 None:intergenic 40.0%
CAAACACCATGGATACAAAC+AGG - chr6_2:14727447-14727466 Msa0910440:CDS 40.0%
!! CATTTTGTTTGGATCCGAGA+TGG - chr6_2:14727485-14727504 Msa0910440:intron 40.0%
CTCTTTCACCTATTTCAGTG+AGG + chr6_2:14727584-14727603 None:intergenic 40.0%
CTCACTGAAATAGGTGAAAG+AGG - chr6_2:14727582-14727601 Msa0910440:CDS 40.0%
!! AGACGGCTTTGAAATTTGAC+AGG - chr6_2:14727792-14727811 Msa0910440:CDS 40.0%
CCAAAACTGAATCAAACGCT+GGG + chr6_2:14727882-14727901 None:intergenic 40.0%
ACCAAAACTGAATCAAACGC+TGG + chr6_2:14727883-14727902 None:intergenic 40.0%
! ATTTCCAGTTGATGTCAGAG+GGG - chr6_2:14727981-14728000 Msa0910440:CDS 40.0%
GAGGTTAATAGCTGGTGATA+TGG + chr6_2:14728025-14728044 None:intergenic 40.0%
AAAAGTCACACAAGATTCCG+TGG - chr6_2:14728144-14728163 Msa0910440:intron 40.0%
! AATTTCAATGTGCTGACGAG+GGG + chr6_2:14728373-14728392 None:intergenic 40.0%
! CAATTTCAATGTGCTGACGA+GGG + chr6_2:14728374-14728393 None:intergenic 40.0%
! TCAATTTCAATGTGCTGACG+AGG + chr6_2:14728375-14728394 None:intergenic 40.0%
CTACTAAGTATCCTTCCCAA+TGG + chr6_2:14728553-14728572 None:intergenic 40.0%
CATTGGGAAGGATACTTAGT+AGG - chr6_2:14728551-14728570 Msa0910440:CDS 40.0%
CTTGATTGTGGCTATACCAA+TGG - chr6_2:14728774-14728793 Msa0910440:intron 40.0%
! TTTTGTTGCAATTCGCATGC+AGG - chr6_2:14728798-14728817 Msa0910440:intron 40.0%
! TGCAACAATTAGGGCTTTTG+AGG - chr6_2:14728991-14729010 Msa0910440:CDS 40.0%
!! AACAATTAGGGCTTTTGAGG+AGG - chr6_2:14728994-14729013 Msa0910440:CDS 40.0%
ACTCATTCGAGGCAAAACTA+TGG + chr6_2:14729078-14729097 None:intergenic 40.0%
!! ATAGTTTTGCCTCGAATGAG+TGG - chr6_2:14729077-14729096 Msa0910440:CDS 40.0%
!! CACTGATTGTTTCTAACCGT+TGG + chr6_2:14729108-14729127 None:intergenic 40.0%
ATTCACCTCAGGTGAGAATT+CGG - chr6_2:14729180-14729199 Msa0910440:CDS 40.0%
CATTCCAGGAATTATTGGCA+TGG - chr6_2:14729266-14729285 Msa0910440:CDS 40.0%
! ATTGGCATGGCTCTATCTTA+TGG - chr6_2:14729279-14729298 Msa0910440:CDS 40.0%
AAAATCGTCCTCCTTCGAAT+TGG - chr6_2:14729430-14729449 Msa0910440:CDS 40.0%
GATCTGTATCGTATCTGACA+TGG + chr6_2:14729573-14729592 None:intergenic 40.0%
CAGATACGATACAGATCCAA+CGG - chr6_2:14729576-14729595 Msa0910440:CDS 40.0%
!! CAGTGCTTTATTTCGTCTTG+TGG - chr6_2:14729692-14729711 Msa0910440:CDS 40.0%
!! CATGATTTGAGGTCACGTTT+TGG - chr6_2:14729771-14729790 Msa0910440:five_prime_UTR 40.0%
TTAGCATTATGTTGGGAGTG+GGG - chr6_2:14729955-14729974 Msa0910440:five_prime_UTR 40.0%
ATTGTAAGGGAGTTAAGGAG+TGG + chr6_2:14730007-14730026 None:intergenic 40.0%
AGTTGTCCAAGGAAAAGAAG+AGG - chr6_2:14730108-14730127 Msa0910440:five_prime_UTR 40.0%
GTTGTCCAAGGAAAAGAAGA+GGG - chr6_2:14730109-14730128 Msa0910440:five_prime_UTR 40.0%
GAAGAGGGTTTAAACTCATC+AGG - chr6_2:14730124-14730143 Msa0910440:five_prime_UTR 40.0%
TTGTTGAGGATGGATCAAAC+TGG - chr6_2:14730232-14730251 Msa0910440:five_prime_UTR 40.0%
!! TGCTCTTTTGAGGAGAAGTA+GGG - chr6_2:14730290-14730309 Msa0910440:five_prime_UTR 40.0%
TTTGAGGAGAAGTAGGGTAT+TGG - chr6_2:14730296-14730315 Msa0910440:five_prime_UTR 40.0%
ACATAGGATACCAACTGTGA+TGG - chr6_2:14730419-14730438 Msa0910440:five_prime_UTR 40.0%
ATACTGCAATCCATCACAGT+TGG + chr6_2:14730432-14730451 None:intergenic 40.0%
!! AACTGTGATGGATTGCAGTA+TGG - chr6_2:14730431-14730450 Msa0910440:five_prime_UTR 40.0%
!! ATGGTTCTAGCCATAAGTGA+TGG - chr6_2:14730450-14730469 Msa0910440:five_prime_UTR 40.0%
CGGAAACTTACCATCACTTA+TGG + chr6_2:14730463-14730482 None:intergenic 40.0%
GTGTGAGAGACGGTAAAAAT+CGG + chr6_2:14730483-14730502 None:intergenic 40.0%
!! AAGCCATTGACTGTGTTTTC+AGG - chr6_2:14730625-14730644 Msa0910440:five_prime_UTR 40.0%
AGAGAGAAGAATCGTTGTTC+AGG - chr6_2:14730686-14730705 Msa0910440:five_prime_UTR 40.0%
ATAACAGAAACTGCTGAGGA+AGG + chr6_2:14730905-14730924 None:intergenic 40.0%
GGCAGAAACTAGCTGCATAT+TGG + chr6_2:14725487-14725506 None:intergenic 45.0%
AAAGAATTGTCCCTCGAGGT+AGG - chr6_2:14725771-14725790 Msa0910440:CDS 45.0%
AACATCCAAACCTACCTCGA+GGG + chr6_2:14725784-14725803 None:intergenic 45.0%
TAACATCCAAACCTACCTCG+AGG + chr6_2:14725785-14725804 None:intergenic 45.0%
AGTCTTCGTGCGCCTTTAAT+AGG - chr6_2:14725888-14725907 Msa0910440:CDS 45.0%
CAGGATCAACTTCATCGATC+TGG + chr6_2:14725914-14725933 None:intergenic 45.0%
CCTTGGCAAATGGAGTAACA+TGG + chr6_2:14725941-14725960 None:intergenic 45.0%
CCATGTTACTCCATTTGCCA+AGG - chr6_2:14725938-14725957 Msa0910440:intron 45.0%
AAGAATCCAGCCTTGGCAAA+TGG + chr6_2:14725951-14725970 None:intergenic 45.0%
CTTACTCAAGAATCCAGCCT+TGG + chr6_2:14725958-14725977 None:intergenic 45.0%
GGTCAGACTCTCTCAATTTC+GGG + chr6_2:14726049-14726068 None:intergenic 45.0%
CGGTCAGACTCTCTCAATTT+CGG + chr6_2:14726050-14726069 None:intergenic 45.0%
CGAAATTGAGAGAGTCTGAC+CGG - chr6_2:14726048-14726067 Msa0910440:intron 45.0%
GAAATTGAGAGAGTCTGACC+GGG - chr6_2:14726049-14726068 Msa0910440:intron 45.0%
!!! CATTTTTTGCCATCGGAGAG+AGG - chr6_2:14726160-14726179 Msa0910440:intron 45.0%
TTACCAAAACCTCTCTCCGA+TGG + chr6_2:14726172-14726191 None:intergenic 45.0%
! TGCCTTTATATTGGTTGCCG+AGG - chr6_2:14726250-14726269 Msa0910440:intron 45.0%
! GCCTTTATATTGGTTGCCGA+GGG - chr6_2:14726251-14726270 Msa0910440:intron 45.0%
ACCCTCGGCAACCAATATAA+AGG + chr6_2:14726255-14726274 None:intergenic 45.0%
TACGGCTATCGAATTCTGCT+AGG - chr6_2:14726432-14726451 Msa0910440:CDS 45.0%
!! TCTGCTAGGTTGATTCACTC+TGG - chr6_2:14726446-14726465 Msa0910440:CDS 45.0%
CATGTCTGGTGAAACCAGAA+TGG + chr6_2:14726524-14726543 None:intergenic 45.0%
!! CATTCTGGTTTCACCAGACA+TGG - chr6_2:14726522-14726541 Msa0910440:CDS 45.0%
GGAGAATTGTTGTCCATGTC+TGG + chr6_2:14726538-14726557 None:intergenic 45.0%
! GTGTTGCTAGTCCAATTGTG+CGG + chr6_2:14726589-14726608 None:intergenic 45.0%
AGCAACACTTGCATCATTGG+CGG - chr6_2:14726601-14726620 Msa0910440:intron 45.0%
GAAGCAGTAGACACCAACAT+CGG + chr6_2:14726881-14726900 None:intergenic 45.0%
AGAGCCGATTACAAGTATCC+CGG - chr6_2:14726982-14727001 Msa0910440:CDS 45.0%
AAGTATCCCGGATGTCATTG+CGG - chr6_2:14726994-14727013 Msa0910440:CDS 45.0%
ATGATCACCGCAATGACATC+CGG + chr6_2:14727004-14727023 None:intergenic 45.0%
TGTCATTGCGGTGATCATTC+AGG - chr6_2:14727006-14727025 Msa0910440:CDS 45.0%
! TTTGCAGTTCTGGTGCATCA+AGG + chr6_2:14727063-14727082 None:intergenic 45.0%
ATGCATCAAAGCCAACCCTA+CGG - chr6_2:14727167-14727186 Msa0910440:CDS 45.0%
GGTTAGACATGGCCAAAAAG+TGG - chr6_2:14727204-14727223 Msa0910440:CDS 45.0%
!!! CTCCACAGATAGCCACTTTT+TGG + chr6_2:14727219-14727238 None:intergenic 45.0%
!! TGCTAAGAGGGTTGATTTGC+CGG + chr6_2:14727251-14727270 None:intergenic 45.0%
! TACAGGTTGAAGTTTACGGG+CGG - chr6_2:14727409-14727428 Msa0910440:CDS 45.0%
!! GACTTTGAGTTGCTTCCCTA+TGG - chr6_2:14727555-14727574 Msa0910440:intron 45.0%
ATTTCAGTGAGGTCGCCATA+GGG + chr6_2:14727573-14727592 None:intergenic 45.0%
TATTTCAGTGAGGTCGCCAT+AGG + chr6_2:14727574-14727593 None:intergenic 45.0%
TATGGCGACCTCACTGAAAT+AGG - chr6_2:14727573-14727592 Msa0910440:intron 45.0%
TGTGCATCAACAGCGCTAAA+TGG + chr6_2:14727693-14727712 None:intergenic 45.0%
AAACTGAATCAAACGCTGGG+AGG + chr6_2:14727879-14727898 None:intergenic 45.0%
! CCCAGCGTTTGATTCAGTTT+TGG - chr6_2:14727879-14727898 Msa0910440:CDS 45.0%
! TTTCCAGTTGATGTCAGAGG+GGG - chr6_2:14727982-14728001 Msa0910440:CDS 45.0%
! CTTGGCTTGAGGTTAATAGC+TGG + chr6_2:14728033-14728052 None:intergenic 45.0%
AACCTCAAGCCAAGAATTCC+AGG - chr6_2:14728039-14728058 Msa0910440:CDS 45.0%
ACAAGATTCCGTGGAACAAC+AGG - chr6_2:14728153-14728172 Msa0910440:intron 45.0%
AGAAAGAGAGAAAGGAGACG+CGG - chr6_2:14728213-14728232 Msa0910440:intron 45.0%
ATTGCAAACGTGAGGCTGAA+TGG + chr6_2:14728694-14728713 None:intergenic 45.0%
ATTCAGCCTCACGTTTGCAA+TGG - chr6_2:14728693-14728712 Msa0910440:CDS 45.0%
TTCAGCCTCACGTTTGCAAT+GGG - chr6_2:14728694-14728713 Msa0910440:CDS 45.0%
CTCATGGCAAGTCTTGATTG+TGG - chr6_2:14728762-14728781 Msa0910440:intron 45.0%
GCAGAGATACTACTTTGCCT+TGG - chr6_2:14728892-14728911 Msa0910440:CDS 45.0%
CCTTGGCGAAAGAACTAATG+CGG - chr6_2:14728909-14728928 Msa0910440:CDS 45.0%
CATGTAGCAGAAACTGTTGC+TGG - chr6_2:14728965-14728984 Msa0910440:CDS 45.0%
TTGCTGGAGCTGCAACAATT+AGG - chr6_2:14728981-14729000 Msa0910440:CDS 45.0%
TGCTGGAGCTGCAACAATTA+GGG - chr6_2:14728982-14729001 Msa0910440:CDS 45.0%
TTGGATCAACCACTCATTCG+AGG + chr6_2:14729089-14729108 None:intergenic 45.0%
CGAATGAGTGGTTGATCCAA+CGG - chr6_2:14729089-14729108 Msa0910440:CDS 45.0%
AACAACCGAATTCTCACCTG+AGG + chr6_2:14729188-14729207 None:intergenic 45.0%
AGAGCCATGCCAATAATTCC+TGG + chr6_2:14729273-14729292 None:intergenic 45.0%
ATTTCTACTTTGCCGGCAAC+TGG + chr6_2:14729456-14729475 None:intergenic 45.0%
ATGAAGTACAAGTGGTCCGT+TGG + chr6_2:14729595-14729614 None:intergenic 45.0%
AACGGACCACTTGTACTTCA+TGG - chr6_2:14729594-14729613 Msa0910440:CDS 45.0%
ACGGACCACTTGTACTTCAT+GGG - chr6_2:14729595-14729614 Msa0910440:CDS 45.0%
GTGATCCCATGAAGTACAAG+TGG + chr6_2:14729603-14729622 None:intergenic 45.0%
! TTTGAAGCAGGGCACAAGAT+TGG - chr6_2:14729630-14729649 Msa0910440:CDS 45.0%
ATTGGTATCGTCGGAAGAAC+AGG - chr6_2:14729648-14729667 Msa0910440:CDS 45.0%
TTAAAAAGGGTCGGATCCTG+AGG + chr6_2:14729804-14729823 None:intergenic 45.0%
! CAGGATCCGACCCTTTTTAA+CGG - chr6_2:14729804-14729823 Msa0910440:five_prime_UTR 45.0%
! AGGATCCGACCCTTTTTAAC+GGG - chr6_2:14729805-14729824 Msa0910440:five_prime_UTR 45.0%
ACTGTCCCGTTAAAAAGGGT+CGG + chr6_2:14729813-14729832 None:intergenic 45.0%
CACTGATCAAGAGATATGGG+AGG - chr6_2:14729863-14729882 Msa0910440:five_prime_UTR 45.0%
AGTTAAGGAGTGGAGGGATA+CGG + chr6_2:14729997-14730016 None:intergenic 45.0%
TAAGGGAGTTAAGGAGTGGA+GGG + chr6_2:14730003-14730022 None:intergenic 45.0%
TGTTACGCAGTTGTTGAGGA+TGG - chr6_2:14730222-14730241 Msa0910440:five_prime_UTR 45.0%
GATGGATCAAACTGGAGCAT+GGG - chr6_2:14730240-14730259 Msa0910440:five_prime_UTR 45.0%
!! GTGCTCTTTTGAGGAGAAGT+AGG - chr6_2:14730289-14730308 Msa0910440:five_prime_UTR 45.0%
!! GAGAAGTAGGGTATTGGTGT+TGG - chr6_2:14730302-14730321 Msa0910440:five_prime_UTR 45.0%
AGATTGTACGGTGATCACAG+TGG - chr6_2:14730395-14730414 Msa0910440:five_prime_UTR 45.0%
GTTGTTCAGGAAGCTTGTCA+AGG - chr6_2:14730699-14730718 Msa0910440:five_prime_UTR 45.0%
GGAAGCTTGTCAAGGAATAC+TGG - chr6_2:14730707-14730726 Msa0910440:five_prime_UTR 45.0%
! TTTTGTCGAAATCGTGGGTG+AGG - chr6_2:14730861-14730880 Msa0910440:five_prime_UTR 45.0%
ATTGTCCCTCGAGGTAGGTT+TGG - chr6_2:14725776-14725795 Msa0910440:CDS 50.0%
GTTACTCCATTTGCCAAGGC+TGG - chr6_2:14725942-14725961 Msa0910440:intron 50.0%
! TTGCCATCGGAGAGAGGTTT+TGG - chr6_2:14726166-14726185 Msa0910440:intron 50.0%
!! CGGAGAGAGGTTTTGGTAAC+CGG - chr6_2:14726173-14726192 Msa0910440:intron 50.0%
!! GCTAGGTTGATTCACTCTGG+TGG - chr6_2:14726449-14726468 Msa0910440:CDS 50.0%
TGATCACCGCAATGACATCC+GGG + chr6_2:14727003-14727022 None:intergenic 50.0%
GGCCAAAAAGTGGCTATCTG+TGG - chr6_2:14727214-14727233 Msa0910440:CDS 50.0%
GTGGCTATCTGTGGAGAAGT+TGG - chr6_2:14727223-14727242 Msa0910440:CDS 50.0%
! ATCTGTGGAGAAGTTGGCTC+CGG - chr6_2:14727229-14727248 Msa0910440:CDS 50.0%
TTACCCCCTCTGACATCAAC+TGG + chr6_2:14727988-14728007 None:intergenic 50.0%
! GTCCTGGAATTCTTGGCTTG+AGG + chr6_2:14728044-14728063 None:intergenic 50.0%
TGACGAGGTCCTGGAATTCT+TGG + chr6_2:14728051-14728070 None:intergenic 50.0%
!! TCTCCTTGTGAGCATTGACG+AGG + chr6_2:14728066-14728085 None:intergenic 50.0%
AATGCTCACAAGGAGACTGC+TGG - chr6_2:14728070-14728089 Msa0910440:CDS 50.0%
!! TGCTGGTTCTAACGAGCTTG+TGG - chr6_2:14728087-14728106 Msa0910440:CDS 50.0%
GAAAGAGAGAAAGGAGACGC+GGG - chr6_2:14728214-14728233 Msa0910440:intron 50.0%
AGACATCGGTGCACGAAAGA+GGG + chr6_2:14728515-14728534 None:intergenic 50.0%
AAGACATCGGTGCACGAAAG+AGG + chr6_2:14728516-14728535 None:intergenic 50.0%
ACGACTCTACACCATTGGGA+AGG - chr6_2:14728539-14728558 Msa0910440:CDS 50.0%
CAAACGTGAGGCTGAATGGA+AGG + chr6_2:14728690-14728709 None:intergenic 50.0%
!! CAGTTTTGGCAGTCGTCTCA+TGG - chr6_2:14728746-14728765 Msa0910440:intron 50.0%
! CCGCATTAGTTCTTTCGCCA+AGG + chr6_2:14728912-14728931 None:intergenic 50.0%
!! AACCATGCAAAGTGCTGCAG+CGG + chr6_2:14729143-14729162 None:intergenic 50.0%
ACCTGAGGTGAATGTTCCAG+GGG + chr6_2:14729173-14729192 None:intergenic 50.0%
CACCTGAGGTGAATGTTCCA+GGG + chr6_2:14729174-14729193 None:intergenic 50.0%
TCACCTGAGGTGAATGTTCC+AGG + chr6_2:14729175-14729194 None:intergenic 50.0%
GGGCACAAGATTGGTATCGT+CGG - chr6_2:14729639-14729658 Msa0910440:CDS 50.0%
ATCGTCGGAAGAACAGGAAG+CGG - chr6_2:14729654-14729673 Msa0910440:CDS 50.0%
TTTCGTCTTGTGGAACCAGC+AGG - chr6_2:14729702-14729721 Msa0910440:CDS 50.0%
GTAAGGGAGTTAAGGAGTGG+AGG + chr6_2:14730004-14730023 None:intergenic 50.0%
CAGTTGCGAGAAGTTGTCCA+AGG - chr6_2:14730097-14730116 Msa0910440:five_prime_UTR 50.0%
GGATGGATCAAACTGGAGCA+TGG - chr6_2:14730239-14730258 Msa0910440:five_prime_UTR 50.0%
CAAACTGGAGCATGGGACAA+AGG - chr6_2:14730247-14730266 Msa0910440:five_prime_UTR 50.0%
! ACTCGGCCCTAATGGTTTTC+TGG + chr6_2:14730371-14730390 None:intergenic 50.0%
CACCGTACAATCTGCGAACT+CGG + chr6_2:14730388-14730407 None:intergenic 50.0%
! GAGAAAGAGGGTGTGAGAGA+CGG + chr6_2:14730493-14730512 None:intergenic 50.0%
AGTAGACACCAACATCGGCG+AGG + chr6_2:14726876-14726895 None:intergenic 55.0%
GGTGATATGGACCAGCTTGC+TGG + chr6_2:14728012-14728031 None:intergenic 55.0%
!! TGTGAGCATTGACGAGGTCC+TGG + chr6_2:14728060-14728079 None:intergenic 55.0%
GGACCTCGTCAATGCTCACA+AGG - chr6_2:14728060-14728079 Msa0910440:CDS 55.0%
AGCCTCACGTTTGCAATGGG+AGG - chr6_2:14728697-14728716 Msa0910440:CDS 55.0%
TGCCTCCCATTGCAAACGTG+AGG + chr6_2:14728702-14728721 None:intergenic 55.0%
TGCATGGTTATGCTTCCCCC+TGG - chr6_2:14729154-14729173 Msa0910440:CDS 55.0%
CCTGAGGTGAATGTTCCAGG+GGG + chr6_2:14729172-14729191 None:intergenic 55.0%
GCAACTGGCCAATTCGAAGG+AGG + chr6_2:14729441-14729460 None:intergenic 55.0%
CCTTCGAATTGGCCAGTTGC+CGG - chr6_2:14729441-14729460 Msa0910440:CDS 55.0%
TCGTCGGAAGAACAGGAAGC+GGG - chr6_2:14729655-14729674 Msa0910440:CDS 55.0%
TAAGGAGTGGAGGGATACGG+AGG + chr6_2:14729994-14730013 None:intergenic 55.0%
!! GTTTGGGGCGTGCTCTTTTG+AGG - chr6_2:14730280-14730299 Msa0910440:five_prime_UTR 55.0%
ATCTGCGAACTCGGCCCTAA+TGG + chr6_2:14730379-14730398 None:intergenic 55.0%
GGCCGAGTTCGCAGATTGTA+CGG - chr6_2:14730383-14730402 Msa0910440:five_prime_UTR 55.0%
CGGTGATCACAGTGGCACAT+AGG - chr6_2:14730403-14730422 Msa0910440:five_prime_UTR 55.0%
CTTCTGGACCTCGCCGATGT+TGG - chr6_2:14726865-14726884 Msa0910440:intron 60.0%
GAGGGGGTAATCCAGCAAGC+TGG - chr6_2:14727998-14728017 Msa0910440:CDS 60.0%
CACCGCTGCAGCACTTTGCA+TGG - chr6_2:14729138-14729157 Msa0910440:CDS 60.0%
CCCCCTGGAACATTCACCTC+AGG - chr6_2:14729169-14729188 Msa0910440:CDS 60.0%
CCGGCAACTGGCCAATTCGA+AGG + chr6_2:14729444-14729463 None:intergenic 60.0%
CGTCTTGTGGAACCAGCAGG+AGG - chr6_2:14729705-14729724 Msa0910440:CDS 60.0%
GTGGAGGGATACGGAGGTCG+AGG + chr6_2:14729988-14730007 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 14725096 14731051 14725096 ID=Msa0910440;Name=Msa0910440
chr6_2 mRNA 14725096 14731051 14725096 ID=Msa0910440-mRNA-1;Parent=Msa0910440;Name=Msa0910440-mRNA-1;_AED=0.07;_eAED=0.07;_QI=1290|0.9|0.90|1|1|1|11|292|1085
chr6_2 exon 14725096 14725500 14725096 ID=Msa0910440-mRNA-1:exon:3263;Parent=Msa0910440-mRNA-1
chr6_2 exon 14725676 14725915 14725676 ID=Msa0910440-mRNA-1:exon:3262;Parent=Msa0910440-mRNA-1
chr6_2 exon 14726002 14726065 14726002 ID=Msa0910440-mRNA-1:exon:3261;Parent=Msa0910440-mRNA-1
chr6_2 exon 14726317 14726568 14726317 ID=Msa0910440-mRNA-1:exon:3260;Parent=Msa0910440-mRNA-1
chr6_2 exon 14726659 14726873 14726659 ID=Msa0910440-mRNA-1:exon:3259;Parent=Msa0910440-mRNA-1
chr6_2 exon 14726957 14727251 14726957 ID=Msa0910440-mRNA-1:exon:3258;Parent=Msa0910440-mRNA-1
chr6_2 exon 14727328 14727492 14727328 ID=Msa0910440-mRNA-1:exon:3257;Parent=Msa0910440-mRNA-1
chr6_2 exon 14727574 14728158 14727574 ID=Msa0910440-mRNA-1:exon:3256;Parent=Msa0910440-mRNA-1
chr6_2 exon 14728247 14728333 14728247 ID=Msa0910440-mRNA-1:exon:3255;Parent=Msa0910440-mRNA-1
chr6_2 exon 14728413 14728733 14728413 ID=Msa0910440-mRNA-1:exon:3254;Parent=Msa0910440-mRNA-1
chr6_2 exon 14728841 14731051 14728841 ID=Msa0910440-mRNA-1:exon:3253;Parent=Msa0910440-mRNA-1
chr6_2 five_prime_UTR 14729762 14731051 14729762 ID=Msa0910440-mRNA-1:five_prime_utr;Parent=Msa0910440-mRNA-1
chr6_2 CDS 14728841 14729761 14728841 ID=Msa0910440-mRNA-1:cds;Parent=Msa0910440-mRNA-1
chr6_2 CDS 14728413 14728733 14728413 ID=Msa0910440-mRNA-1:cds;Parent=Msa0910440-mRNA-1
chr6_2 CDS 14728247 14728333 14728247 ID=Msa0910440-mRNA-1:cds;Parent=Msa0910440-mRNA-1
chr6_2 CDS 14727574 14728158 14727574 ID=Msa0910440-mRNA-1:cds;Parent=Msa0910440-mRNA-1
chr6_2 CDS 14727328 14727492 14727328 ID=Msa0910440-mRNA-1:cds;Parent=Msa0910440-mRNA-1
chr6_2 CDS 14726957 14727251 14726957 ID=Msa0910440-mRNA-1:cds;Parent=Msa0910440-mRNA-1
chr6_2 CDS 14726659 14726873 14726659 ID=Msa0910440-mRNA-1:cds;Parent=Msa0910440-mRNA-1
chr6_2 CDS 14726317 14726568 14726317 ID=Msa0910440-mRNA-1:cds;Parent=Msa0910440-mRNA-1
chr6_2 CDS 14726002 14726065 14726002 ID=Msa0910440-mRNA-1:cds;Parent=Msa0910440-mRNA-1
chr6_2 CDS 14725676 14725915 14725676 ID=Msa0910440-mRNA-1:cds;Parent=Msa0910440-mRNA-1
chr6_2 CDS 14725388 14725500 14725388 ID=Msa0910440-mRNA-1:cds;Parent=Msa0910440-mRNA-1
chr6_2 three_prime_UTR 14725096 14725387 14725096 ID=Msa0910440-mRNA-1:three_prime_utr;Parent=Msa0910440-mRNA-1
Gene Sequence

>Msa0910440

ATGAAAGTTAGATCACTACTTAATGCAGCCATTTATAAGAAAATACTACGGCTATCGAATTCTGCTAGGTTGATTCACTCTGGTGGTGAGATAATGAATTATATGATCGTAGATGCTTATAGAATCGGAGAATTTCCATTCTGGTTTCACCAGACATGGACAACAATTCTCCAATTGTGTATTGCATTAGTAATTCTTTTCCGCACAATTGGACTAGCAACACTTGCATCATTGGCGGTGATAGTTCTCACTGTGATTTGCAATTATCCACTAGCAAAATTACAACACAAGTATCAGAGCAAACTTATGGTGGCACAAGATGAGAGATTAAAGGCTAGTTCAGAAGCTCTTGTAAATATGAAAGTGTTGAAGTTGTATGCTTGGGAAAACCATTTTAAAAATGTTGTAGATTTCTTAAGAAATGTGGAACTCAAAATGTTATATGCAGTGCAATTAAGAAGAACATACAATGTCTTTCTCTTCTGGACCTCGCCGATGTTGGTGTCTACTGCTTCTTTTCTAGCATGTTACTTCTTGGATGTTCCTTTGCATGCAAGTAATGTTTTCACTTTTGTGGCAACTTTGCGCCTTGTTCAAGAGCCGATTACAAGTATCCCGGATGTCATTGCGGTGATCATTCAGGCAAAAGTTGCATTTGCTCGAATTGTTGATTTCCTTGATGCACCAGAACTGCAAAGTGAAAACTTGAAGAACGAGTGCTTTGATGACAACCTCAAAGGATCAATTTCAATAAAATCTGCTAACTTTTCATGGAAAGGTAATGCATCAAAGCCAACCCTACGGAACATAAATTTAGAGGTTAGACATGGCCAAAAAGTGGCTATCTGTGGAGAAGTTGGCTCCGGCAAATCAACCCTCTTAGCAACAATTCTTGGAGAAGTTACCAAAATAAAAGGAATCGTTGAAGTTTACGGGCGGTTTGCATATGTTTCTCAAACACCATGGATACAAACAGGTACAATACGGGAAAACATTTTGTTTGGATCCGAGATGGATGATCAAAGATATCAAGAAACACTTCAAAAGTCTTCATTGAAAAAGGACTTTGAGTTGCTTCCCTATGGCGACCTCACTGAAATAGGTGAAAGAGGAGTTAATTTAAGTGGAGGTCAAAAACAGCGAATTCAACTTGCTCGTGCTCTTTATCAGAATGCTGATATATATCTATTGGACGATCCATTTAGCGCTGTTGATGCACATACTGCAAAAAATTTGTTTGATGAATATATCATGGAAGGACTCAAAGGGAAAACAGTCTTACTTGTGACTCATCAAGTCGACTTCCTCCCAGCGTTTGATTCAGTTTTGTTGATGTCAGAGGGGGTAATCCAGCAAGCTGGTCCATATCACCAGCTATTAACCTCAAGCCAAGAATTCCAGGACCTCGTCAATGCTCACAAGGAGACTGCTGGTTCTAACGAGCTTGTGGATGTTACTTTTTCTCAGAGACATTCATCTTCTAGAAAAGTCACACAAGATTCCGTGGAACAACAGGTTAAATTAACAAATGGAAATCAATTAATTAAGCAAGAAGAAAGAGAGAAAGGAGACGCGGGATTAAAGCCTTACATACAGTATTTGAATGAGATGAAAGGATATATATTCTTCTTGATGGCTTCCCTTTGTCATCTTCTTTTCGTTGTTTGTCAGATATTGCAAAACTCATGGATGGCTGCTAAAGTTGATGATCCCCTCGTCAGCACATTGAAATTGATTTTAGTTTATTTCCTAATTGGTGCTTTTTCAGTAGTTTTCTTGTTCACCAGAAGTCTACTTGTAGTTTCTTTGGGTCTTCAATCATCAAAAAAATTATTTTCACAGTTGATGAACTCCCTCTTTCGTGCACCGATGTCTTTTTACGACTCTACACCATTGGGAAGGATACTTAGTAGGGTCTCATCTGATTTGAGCATTATGGATCTCGACCTTCCATTCAGCCTCACGTTTGCAATGGGAGGCACAATCGTTTTTCTTTCTAGTCTGACAGTTTTGGCAGTCGTCTCATGGCAAGTCTTGATTGTGGCTATACCAATGGTTTTTGTTGCAATTCGCATGCAGAGATACTACTTTGCCTTGGCGAAAGAACTAATGCGGATGAATGGCACAACAAAATCATCATTAGCTAATCATGTAGCAGAAACTGTTGCTGGAGCTGCAACAATTAGGGCTTTTGAGGAGGAAGATCGTTCTTTTGAGAAGAACCTTGATCTCATTGATATTAATGCTAGTGCTTTTTTCCATAGTTTTGCCTCGAATGAGTGGTTGATCCAACGGTTAGAAACAATCAGTGCAGTTGTTCTCACCGCTGCAGCACTTTGCATGGTTATGCTTCCCCCTGGAACATTCACCTCAGGAATTATTGGCATGGCTCTATCTTATGGCCTTTCATTAAACAATTCCTTAGTATTTTCAATTCAAAATCAATGCACTGTTGCAAATCACATAATATCAGTAGAGAGGTTAAAACAATATATGCATATAGAAAGTGAGGCGGAAGAAATAGTAGAAGAAAATCGTCCTCCTTCGAATTGGCCAGTTGCCGGCAAAGTAGAAATAAATAACTTGAAGATACGATACAGATCCAACGGACCACTTGTACTTCATGGGATCACATGTACATTTGAAGCAGGGCACAAGATTGGTATCGTCGGAAGAACAGGAAGCGGGAAATCCACTCTTATCAGTGCTTTATTTCGTCTTGTGGAACCAGCAGGAGGAAAAATTATAGTTGATGGAATAGACATATCATCTATTGGTCTTCATGATTTGAGGTCACGTTTTGGTATTATACCTCAGGATCCGACCCTTTTTAACGGGACAGTTCTTGGGAAGTGTCAGTTGCGAGAAGTTGTCCAAGGAAAAGAAGAGGGTTTAAACTCATCAGTTGTTGAGGATGGATCAAACTGGAGCATGGGACAAAGGCAGTTATTCTGTTTGGGGCGTGCTCTTTTGAGGAGAAGTAGGGTATTGGTGTTGGATGAAGCAACTGCTTCAATCGATAATTCTACTGATCTTATTCTCCAGAAAACCATTAGGGCCGAGTTCGCAGATTGTACGGTGATCACAGTGGCACATAGGATACCAACTGTGATGGATTGCAGTATGGTTCTAGCCATAAGTGATGGAAAATTGGCGGAGTACGACGAACCAATGAACTTGATGAAGAGAGAAGAATCGTTGTTCAGGAAGCTTGTCAAGGAATACTGGTCTCATTTTCAGTCTGCAGAATCGCGTTGA
Protein sequence

>Msa0910440

MKVRSLLNAAIYKKILRLSNSARLIHSGGEIMNYMIVDAYRIGEFPFWFHQTWTTILQLCIALVILFRTIGLATLASLAVIVLTVICNYPLAKLQHKYQSKLMVAQDERLKASSEALVNMKVLKLYAWENHFKNVVDFLRNVELKMLYAVQLRRTYNVFLFWTSPMLVSTASFLACYFLDVPLHASNVFTFVATLRLVQEPITSIPDVIAVIIQAKVAFARIVDFLDAPELQSENLKNECFDDNLKGSISIKSANFSWKGNASKPTLRNINLEVRHGQKVAICGEVGSGKSTLLATILGEVTKIKGIVEVYGRFAYVSQTPWIQTGTIRENILFGSEMDDQRYQETLQKSSLKKDFELLPYGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTAKNLFDEYIMEGLKGKTVLLVTHQVDFLPAFDSVLLMSEGVIQQAGPYHQLLTSSQEFQDLVNAHKETAGSNELVDVTFSQRHSSSRKVTQDSVEQQVKLTNGNQLIKQEEREKGDAGLKPYIQYLNEMKGYIFFLMASLCHLLFVVCQILQNSWMAAKVDDPLVSTLKLILVYFLIGAFSVVFLFTRSLLVVSLGLQSSKKLFSQLMNSLFRAPMSFYDSTPLGRILSRVSSDLSIMDLDLPFSLTFAMGGTIVFLSSLTVLAVVSWQVLIVAIPMVFVAIRMQRYYFALAKELMRMNGTTKSSLANHVAETVAGAATIRAFEEEDRSFEKNLDLIDINASAFFHSFASNEWLIQRLETISAVVLTAAALCMVMLPPGTFTSGIIGMALSYGLSLNNSLVFSIQNQCTVANHIISVERLKQYMHIESEAEEIVEENRPPSNWPVAGKVEINNLKIRYRSNGPLVLHGITCTFEAGHKIGIVGRTGSGKSTLISALFRLVEPAGGKIIVDGIDISSIGLHDLRSRFGIIPQDPTLFNGTVLGKCQLREVVQGKEEGLNSSVVEDGSNWSMGQRQLFCLGRALLRRSRVLVLDEATASIDNSTDLILQKTIRAEFADCTVITVAHRIPTVMDCSMVLAISDGKLAEYDEPMNLMKREESLFRKLVKEYWSHFQSAESR*