Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1267020 | KEH32407.1 | 97.818 | 275 | 6 | 0 | 3 | 277 | 2 | 276 | 0.0 | 561 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1267020 | sp|P40343|VPS27_YEAST | 44.615 | 65 | 36 | 0 | 5 | 69 | 164 | 228 | 1.83e-13 | 74.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1267020 | A0A072URX1 | 97.818 | 275 | 6 | 0 | 3 | 277 | 2 | 276 | 0.0 | 561 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0027320 | Msa1267020 | 0.801392 | 9.199470e-49 | -8.615850e-47 |
| Msa0031820 | Msa1267020 | 0.802574 | 5.259830e-49 | -8.615850e-47 |
| Msa0035120 | Msa1267020 | 0.812643 | 3.824186e-51 | -8.615850e-47 |
| Msa0043500 | Msa1267020 | 0.814535 | 1.466436e-51 | -8.615850e-47 |
| Msa0043650 | Msa1267020 | 0.808617 | 2.836633e-50 | -8.615850e-47 |
| Msa0054820 | Msa1267020 | 0.810466 | 1.136953e-50 | -8.615850e-47 |
| Msa0056450 | Msa1267020 | 0.827530 | 1.486956e-54 | -8.615850e-47 |
| Msa0089980 | Msa1267020 | 0.822777 | 1.975795e-53 | -8.615850e-47 |
| Msa0090010 | Msa1267020 | 0.824384 | 8.311812e-54 | -8.615850e-47 |
| Msa0106620 | Msa1267020 | 0.816821 | 4.538751e-52 | -8.615850e-47 |
| Msa0106710 | Msa1267020 | 0.801921 | 7.165612e-49 | -8.615850e-47 |
| Msa0108410 | Msa1267020 | 0.809124 | 2.209188e-50 | -8.615850e-47 |
| Msa0112270 | Msa1267020 | 0.813857 | 2.069840e-51 | -8.615850e-47 |
| Msa0638350 | Msa1267020 | 0.805935 | 1.049610e-49 | -8.615850e-47 |
| Msa0638360 | Msa1267020 | 0.804505 | 2.092219e-49 | -8.615850e-47 |
| Msa0661320 | Msa1267020 | 0.817924 | 2.561874e-52 | -8.615850e-47 |
| Msa0689760 | Msa1267020 | 0.800734 | 1.254370e-48 | -8.615850e-47 |
| Msa0692880 | Msa1267020 | 0.817312 | 3.520175e-52 | -8.615850e-47 |
| Msa0703220 | Msa1267020 | 0.818720 | 1.691662e-52 | -8.615850e-47 |
| Msa0751260 | Msa1267020 | 0.838338 | 3.051147e-57 | -8.615850e-47 |
| Msa0757800 | Msa1267020 | 0.805170 | 1.519412e-49 | -8.615850e-47 |
| Msa0795070 | Msa1267020 | 0.815500 | 8.957170e-52 | -8.615850e-47 |
| Msa0133720 | Msa1267020 | 0.811284 | 7.559991e-51 | -8.615850e-47 |
| Msa0133820 | Msa1267020 | 0.807840 | 4.151898e-50 | -8.615850e-47 |
| Msa0138360 | Msa1267020 | 0.802505 | 5.435672e-49 | -8.615850e-47 |
| Msa0139380 | Msa1267020 | 0.988414 | 6.317736e-174 | -8.615850e-47 |
| Msa0144360 | Msa1267020 | 0.830432 | 2.947063e-55 | -8.615850e-47 |
| Msa0187030 | Msa1267020 | 0.821231 | 4.505865e-53 | -8.615850e-47 |
| Msa0225220 | Msa1267020 | 0.814649 | 1.383231e-51 | -8.615850e-47 |
| Msa0230370 | Msa1267020 | 0.815004 | 1.154121e-51 | -8.615850e-47 |
| Msa1266330 | Msa1267020 | 0.812550 | 4.007190e-51 | -8.615850e-47 |
| Msa1267020 | Msa1307870 | 0.834388 | 3.085633e-56 | -8.615850e-47 |
| Msa1267020 | Msa1365760 | 0.823218 | 1.559459e-53 | -8.615850e-47 |
| Msa1267020 | Msa1371520 | 0.807627 | 4.609193e-50 | -8.615850e-47 |
| Msa1267020 | Msa1393820 | 0.824953 | 6.103341e-54 | -8.615850e-47 |
| Msa1267020 | Msa1409490 | 0.804650 | 1.951372e-49 | -8.615850e-47 |
| Msa1267020 | Msa1413610 | 0.805891 | 1.072248e-49 | -8.615850e-47 |
| Msa1267020 | Msa1418240 | 0.819381 | 1.196496e-52 | -8.615850e-47 |
| Msa1267020 | Msa1446780 | 0.840279 | 9.565807e-58 | -8.615850e-47 |
| Msa0379610 | Msa1267020 | 0.818157 | 2.269279e-52 | -8.615850e-47 |
| Msa0432160 | Msa1267020 | 0.803001 | 4.293584e-49 | -8.615850e-47 |
| Msa0476680 | Msa1267020 | 0.807569 | 4.741603e-50 | -8.615850e-47 |
| Msa1027990 | Msa1267020 | 0.816944 | 4.258268e-52 | -8.615850e-47 |
| Msa1028280 | Msa1267020 | 0.817166 | 3.796886e-52 | -8.615850e-47 |
| Msa1034500 | Msa1267020 | 0.830645 | 2.614003e-55 | -8.615850e-47 |
| Msa1038080 | Msa1267020 | 0.835982 | 1.221757e-56 | -8.615850e-47 |
| Msa1076560 | Msa1267020 | 0.813139 | 2.976738e-51 | -8.615850e-47 |
| Msa0342010 | Msa1267020 | 0.841000 | 6.195222e-58 | -8.615850e-47 |
| Msa1129690 | Msa1267020 | 0.825158 | 5.459674e-54 | -8.615850e-47 |
| Msa1205790 | Msa1267020 | 0.811372 | 7.234381e-51 | -8.615850e-47 |
| Msa1205830 | Msa1267020 | 0.803060 | 4.174277e-49 | -8.615850e-47 |
| Msa1219900 | Msa1267020 | 0.808762 | 2.641524e-50 | -8.615850e-47 |
| Msa0485240 | Msa1267020 | 0.811069 | 8.418586e-51 | -8.615850e-47 |
| Msa0518030 | Msa1267020 | 0.813590 | 2.369605e-51 | -8.615850e-47 |
| Msa0521010 | Msa1267020 | 0.807351 | 5.274088e-50 | -8.615850e-47 |
| Msa0527190 | Msa1267020 | 0.800565 | 1.357835e-48 | -8.615850e-47 |
| Msa0556010 | Msa1267020 | 0.809998 | 1.433839e-50 | -8.615850e-47 |
| Msa0576680 | Msa1267020 | 0.807297 | 5.415356e-50 | -8.615850e-47 |
| Msa0579660 | Msa1267020 | 0.803463 | 3.444217e-49 | -8.615850e-47 |
| Msa0868160 | Msa1267020 | 0.813968 | 1.956381e-51 | -8.615850e-47 |
| Msa0900620 | Msa1267020 | 0.800526 | 1.382947e-48 | -8.615850e-47 |
| Msa0910440 | Msa1267020 | 0.805355 | 1.389387e-49 | -8.615850e-47 |
| Msa0937020 | Msa1267020 | 0.812817 | 3.503351e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1267020 | MtrunA17_Chr4g0069731 | 97.719 | 263 | 6 | 0 | 3 | 265 | 2 | 264 | 0.0 | 536 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1267020 | AT2G26210.1 | 52.660 | 188 | 64 | 4 | 81 | 265 | 4 | 169 | 2.51e-55 | 179 |
| Msa1267020 | AT2G26210.7 | 52.660 | 188 | 64 | 4 | 81 | 265 | 4 | 169 | 2.51e-55 | 179 |
| Msa1267020 | AT2G26210.5 | 52.660 | 188 | 64 | 4 | 81 | 265 | 4 | 169 | 2.51e-55 | 179 |
| Msa1267020 | AT2G26210.6 | 52.660 | 188 | 64 | 4 | 81 | 265 | 4 | 169 | 2.51e-55 | 179 |
| Msa1267020 | AT2G26210.4 | 52.660 | 188 | 64 | 4 | 81 | 265 | 4 | 169 | 2.51e-55 | 179 |
| Msa1267020 | AT2G26210.2 | 57.432 | 148 | 52 | 2 | 118 | 265 | 10 | 146 | 1.76e-50 | 166 |
| Msa1267020 | AT2G26210.3 | 57.432 | 148 | 52 | 2 | 118 | 265 | 10 | 146 | 1.76e-50 | 166 |
Find 91 sgRNAs with CRISPR-Local
Find 318 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATTAGTATATAAGAAAT+TGG | 0.152950 | 8_2:+72108041 | Msa1267020:five_prime_UTR |
| ACTGCCATTGGCAGAATTTA+AGG | 0.172728 | 8_2:-72112165 | None:intergenic |
| CAGATTGATTATGAAGTTAA+TGG | 0.250549 | 8_2:+72111651 | Msa1267020:CDS |
| CAACACATCGTGCTGCTTCT+TGG | 0.262025 | 8_2:-72108123 | None:intergenic |
| GTAATGTTTGAAGCTTTCTT+TGG | 0.275299 | 8_2:-72112425 | None:intergenic |
| ATGTAGGCTTTACCACAATT+TGG | 0.291221 | 8_2:+72108639 | Msa1267020:intron |
| TTCAAACATTACCGGCATTT+AGG | 0.291997 | 8_2:+72112436 | Msa1267020:CDS |
| CATTAACTTCATAATCAATC+TGG | 0.315458 | 8_2:-72111650 | None:intergenic |
| TACACCAAACAAATTTAATA+TGG | 0.327197 | 8_2:-72112594 | None:intergenic |
| CCTAAACTTGTTCGTGGAAC+TGG | 0.331285 | 8_2:-72110664 | None:intergenic |
| TAGGTTGTGATACGGCTCTC+TGG | 0.333681 | 8_2:+72112455 | Msa1267020:CDS |
| GGGACTGTCTTTATTGCATT+TGG | 0.335267 | 8_2:+72111953 | Msa1267020:CDS |
| CCAGTTCCACGAACAAGTTT+AGG | 0.352658 | 8_2:+72110664 | Msa1267020:CDS |
| AGATTGATTATGAAGTTAAT+GGG | 0.360777 | 8_2:+72111652 | Msa1267020:CDS |
| TAATGTTTGAAGCTTTCTTT+GGG | 0.365594 | 8_2:-72112424 | None:intergenic |
| TTTCTTTGGGGAACCACATA+AGG | 0.377863 | 8_2:-72112411 | None:intergenic |
| AATAAGAATTATTACCTCTT+GGG | 0.378917 | 8_2:-72110496 | None:intergenic |
| TTATCCATATTAAATTTGTT+TGG | 0.386424 | 8_2:+72112590 | Msa1267020:three_prime_UTR |
| AAATCTTAAAATCATCCATT+AGG | 0.391992 | 8_2:-72112734 | None:intergenic |
| GTTGCAGTTTCAACACCTTC+AGG | 0.398198 | 8_2:+72108152 | Msa1267020:CDS |
| GATCTCAACAATAAATTTGT+CGG | 0.401146 | 8_2:-72107930 | None:intergenic |
| TTTGATGGAGCTGTAACAAC+TGG | 0.407165 | 8_2:-72110597 | None:intergenic |
| AAAACCTGACTTACCTTTAG+TGG | 0.419439 | 8_2:-72112841 | None:intergenic |
| TGCTAATTACAGAGATAAGC+AGG | 0.440187 | 8_2:+72111932 | Msa1267020:CDS |
| AAATTAGTATATAAGAAATT+GGG | 0.445778 | 8_2:+72108042 | Msa1267020:five_prime_UTR |
| ATCAATCTGGGGTCTGTTTG+AGG | 0.446943 | 8_2:-72111637 | None:intergenic |
| GGGAACTGCAGAAGAGGAAG+GGG | 0.451239 | 8_2:-72110475 | None:intergenic |
| CGAACATTCATCGGATCAAA+TGG | 0.459353 | 8_2:+72108535 | Msa1267020:CDS |
| CTTAAAATCATCCATTAGGA+TGG | 0.459832 | 8_2:-72112730 | None:intergenic |
| GACCCCACTAAAGGTAAGTC+AGG | 0.465598 | 8_2:+72112837 | Msa1267020:three_prime_UTR |
| AAACCTGACTTACCTTTAGT+GGG | 0.478181 | 8_2:-72112840 | None:intergenic |
| AACCCTGGTCATGTAACTAC+TGG | 0.479367 | 8_2:+72111612 | Msa1267020:CDS |
| AAGAAAGCTTCAAACATTAC+CGG | 0.486303 | 8_2:+72112428 | Msa1267020:CDS |
| ATCTTTCTCTGTACCACCCT+GGG | 0.487155 | 8_2:+72112665 | Msa1267020:three_prime_UTR |
| ATTAACTTCATAATCAATCT+GGG | 0.488966 | 8_2:-72111649 | None:intergenic |
| GCAGATAATAACCTTGCATC+AGG | 0.489262 | 8_2:+72110402 | Msa1267020:CDS |
| TGGGGAACTGCAGAAGAGGA+AGG | 0.489945 | 8_2:-72110477 | None:intergenic |
| AGCATCATTGTCGTTGTTGT+GGG | 0.498777 | 8_2:+72108498 | Msa1267020:intron |
| CAGCATCATTGTCGTTGTTG+TGG | 0.502093 | 8_2:+72108497 | Msa1267020:intron |
| TCATTGCTTCATTGAAGAAG+AGG | 0.508340 | 8_2:-72107964 | None:intergenic |
| AAAATGAAGATGCAAGAAAG+TGG | 0.508600 | 8_2:+72112341 | Msa1267020:CDS |
| AGGTTGTGATACGGCTCTCT+GGG | 0.510451 | 8_2:+72112456 | Msa1267020:CDS |
| TCCCTACCTAAACTTGTTCG+TGG | 0.524149 | 8_2:-72110670 | None:intergenic |
| CCTTCCTTAAATTCTGCCAA+TGG | 0.524419 | 8_2:+72112161 | Msa1267020:CDS |
| CCGGCATTTAGGTTGTGATA+CGG | 0.526691 | 8_2:+72112447 | Msa1267020:CDS |
| GCAAGGTTATTATCTGCAGT+TGG | 0.531061 | 8_2:-72110396 | None:intergenic |
| TTTCAACACCTTCAGGAGAC+GGG | 0.531812 | 8_2:+72108159 | Msa1267020:CDS |
| CCTTTGGCACAGATCTGGGA+AGG | 0.533065 | 8_2:+72110281 | Msa1267020:intron |
| GGGGAACTGCAGAAGAGGAA+GGG | 0.533126 | 8_2:-72110476 | None:intergenic |
| ATAAGAATTATTACCTCTTG+GGG | 0.540980 | 8_2:-72110495 | None:intergenic |
| CATCGTGCTGCTTCTTGGAA+AGG | 0.541545 | 8_2:-72108118 | None:intergenic |
| AAAGTGGAGCAATGGATCAA+AGG | 0.543196 | 8_2:+72112357 | Msa1267020:CDS |
| TATCTTTCTCTGTACCACCC+TGG | 0.545767 | 8_2:+72112664 | Msa1267020:three_prime_UTR |
| ATCCGGGCGAAAACTGCCAT+TGG | 0.547384 | 8_2:-72112177 | None:intergenic |
| AACACCTTTAGACTGTGCTC+CGG | 0.550578 | 8_2:+72112298 | Msa1267020:CDS |
| CTCTTGGGGAACTGCAGAAG+AGG | 0.555642 | 8_2:-72110481 | None:intergenic |
| TGCAGTTCTACGTTTAACCC+TGG | 0.560152 | 8_2:+72111597 | Msa1267020:intron |
| GATGCAAGAAAGTGGAGCAA+TGG | 0.564742 | 8_2:+72112349 | Msa1267020:CDS |
| ATTGTGCAGCGAACATTCAT+CGG | 0.567403 | 8_2:+72108526 | Msa1267020:CDS |
| CTCTTCTGCAGTTCCCCAAG+AGG | 0.570434 | 8_2:+72110482 | Msa1267020:CDS |
| GAAAGGAAAGACCCCACTAA+AGG | 0.571512 | 8_2:+72112828 | Msa1267020:three_prime_UTR |
| GTTTCAACACCTTCAGGAGA+CGG | 0.574200 | 8_2:+72108158 | Msa1267020:CDS |
| GCTGCTTCTTGGAAAGGAGG+AGG | 0.581803 | 8_2:-72108112 | None:intergenic |
| ACTCTTTAACGCCTGATGCA+AGG | 0.582993 | 8_2:-72110413 | None:intergenic |
| CGTGCTGCTTCTTGGAAAGG+AGG | 0.583012 | 8_2:-72108115 | None:intergenic |
| TTTGTGTTGAACCTTGGGGA+TGG | 0.583203 | 8_2:+72112788 | Msa1267020:three_prime_UTR |
| TTAAAATCATCCATTAGGAT+GGG | 0.584176 | 8_2:-72112729 | None:intergenic |
| GGAACTGCAGAAGAGGAAGG+GGG | 0.589595 | 8_2:-72110474 | None:intergenic |
| GTAGCCGGAGCACAGTCTAA+AGG | 0.590754 | 8_2:-72112302 | None:intergenic |
| GGCGTTAAAGAGTGTAAGTG+TGG | 0.592771 | 8_2:+72110423 | Msa1267020:CDS |
| AAAGCATACCCGTCTCCTGA+AGG | 0.594623 | 8_2:-72108167 | None:intergenic |
| CCGTATCACAACCTAAATGC+CGG | 0.600865 | 8_2:-72112447 | None:intergenic |
| TTCGAGTAAATGCCAAATTG+TGG | 0.602887 | 8_2:-72108651 | None:intergenic |
| GTACCAGTAGTTACATGACC+AGG | 0.607265 | 8_2:-72111615 | None:intergenic |
| TGATTATGAAGTTAATGGGG+AGG | 0.608490 | 8_2:+72111656 | Msa1267020:CDS |
| CAAATCATTGCAGAGTACAA+AGG | 0.608841 | 8_2:-72107993 | None:intergenic |
| CCATTGGCAGAATTTAAGGA+AGG | 0.611738 | 8_2:-72112161 | None:intergenic |
| CTGATTGTTTCAACAACTCG+CGG | 0.618861 | 8_2:+72108688 | Msa1267020:CDS |
| GTCTATGATGTGTCTTACAT+AGG | 0.621015 | 8_2:-72112566 | None:intergenic |
| GGTACAGAGAAAGATAGTAC+AGG | 0.630741 | 8_2:-72112657 | None:intergenic |
| GTACGACAAACTTCTTCAGA+CGG | 0.636601 | 8_2:+72110306 | Msa1267020:CDS |
| TGGAGCTGTAACAACTGGGA+TGG | 0.638430 | 8_2:-72110592 | None:intergenic |
| GATTGATTATGAAGTTAATG+GGG | 0.643505 | 8_2:+72111653 | Msa1267020:CDS |
| TTTCATTCTCATGGATTCGG+GGG | 0.648019 | 8_2:+72112096 | Msa1267020:CDS |
| AACCTGACTTACCTTTAGTG+GGG | 0.653802 | 8_2:-72112839 | None:intergenic |
| TTAACTTCATAATCAATCTG+GGG | 0.666046 | 8_2:-72111648 | None:intergenic |
| GCTAATTACAGAGATAAGCA+GGG | 0.669971 | 8_2:+72111933 | Msa1267020:CDS |
| TTGATGGAGCTGTAACAACT+GGG | 0.683377 | 8_2:-72110596 | None:intergenic |
| GGAGCTTCACAAATGCAAAG+AGG | 0.686423 | 8_2:-72110450 | None:intergenic |
| TACCAGTAGTTACATGACCA+GGG | 0.703145 | 8_2:-72111614 | None:intergenic |
| AATGTTTGAAGCTTTCTTTG+GGG | 0.720317 | 8_2:-72112423 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTAGTATATAAGAAAT+TGG | + | chr8_2:72108041-72108060 | Msa1267020:five_prime_UTR | 10.0% |
| !! | AAATTAGTATATAAGAAATT+GGG | + | chr8_2:72108042-72108061 | Msa1267020:five_prime_UTR | 10.0% |
| !!! | AAAAAATATCTAGAATATTA+AGG | - | chr8_2:72109635-72109654 | None:intergenic | 10.0% |
| !!! | ATATATATTTTTTTGTCAAT+TGG | - | chr8_2:72110991-72111010 | None:intergenic | 10.0% |
| !! | GAAATTATTATTAATTAAAG+TGG | + | chr8_2:72111161-72111180 | Msa1267020:intron | 10.0% |
| !!! | AGATTTTTTAATTTCTTATA+TGG | + | chr8_2:72111698-72111717 | Msa1267020:intron | 10.0% |
| !! | TTTGATTATTCAAATTTGAT+CGG | + | chr8_2:72108226-72108245 | Msa1267020:intron | 15.0% |
| !! | TATTCTTAACTGATAAATTT+GGG | - | chr8_2:72108283-72108302 | None:intergenic | 15.0% |
| !! | TTATTCTTAACTGATAAATT+TGG | - | chr8_2:72108284-72108303 | None:intergenic | 15.0% |
| !!! | ATTATGTTTGTAAATTTTAC+TGG | + | chr8_2:72108430-72108449 | Msa1267020:intron | 15.0% |
| !!! | AATTTTTGTTTTTTAACTTC+AGG | + | chr8_2:72108562-72108581 | Msa1267020:intron | 15.0% |
| !!! | ATTTTTGTTTTTTAACTTCA+GGG | + | chr8_2:72108563-72108582 | Msa1267020:intron | 15.0% |
| !!! | ATTTTTATGTGTGTATTATA+AGG | + | chr8_2:72108778-72108797 | Msa1267020:intron | 15.0% |
| !! | AAATTACATTAATTAAGCTT+AGG | + | chr8_2:72108803-72108822 | Msa1267020:intron | 15.0% |
| !! | TGGTTTATAATATAACATTA+TGG | + | chr8_2:72109018-72109037 | Msa1267020:intron | 15.0% |
| !! | ATTACATATGATTATATGAA+TGG | + | chr8_2:72110101-72110120 | Msa1267020:intron | 15.0% |
| !!! | TTTATAGTTTTGTTTTTTGA+GGG | + | chr8_2:72111868-72111887 | Msa1267020:intron | 15.0% |
| !!! | TTATCCATATTAAATTTGTT+TGG | + | chr8_2:72112590-72112609 | Msa1267020:three_prime_UTR | 15.0% |
| !!! | TGACATTTTCAACAAAATTA+GGG | - | chr8_2:72108077-72108096 | None:intergenic | 20.0% |
| !!! | TTGACATTTTCAACAAAATT+AGG | - | chr8_2:72108078-72108097 | None:intergenic | 20.0% |
| !! | AGTTAGACTAAAATTTGTAT+TGG | + | chr8_2:72108352-72108371 | Msa1267020:intron | 20.0% |
| !!! | ATTATTTCTCAATTCTCATT+TGG | + | chr8_2:72108744-72108763 | Msa1267020:intron | 20.0% |
| !! | ATCTTCAATTCTTCATTATT+AGG | - | chr8_2:72109234-72109253 | None:intergenic | 20.0% |
| !! | ATGTTAAATTATGATATGTC+AGG | + | chr8_2:72109255-72109274 | Msa1267020:intron | 20.0% |
| !!! | AGTTCCTAATTTCTTTTAAA+CGG | - | chr8_2:72109351-72109370 | None:intergenic | 20.0% |
| !!! | GTCTTTTTTAATTAAAAGTG+AGG | + | chr8_2:72109496-72109515 | Msa1267020:intron | 20.0% |
| !! | ATAGGAAAAAAAGATTATGA+AGG | - | chr8_2:72109526-72109545 | None:intergenic | 20.0% |
| !!! | CATAATCTTTTTTTCCTATT+TGG | + | chr8_2:72109527-72109546 | Msa1267020:intron | 20.0% |
| !!! | ACTCTTAAATTGTTGTTTTT+CGG | - | chr8_2:72109832-72109851 | None:intergenic | 20.0% |
| !! | TTCTCTAATAAATATGTTGA+GGG | - | chr8_2:72109905-72109924 | None:intergenic | 20.0% |
| !! | TTTCTCTAATAAATATGTTG+AGG | - | chr8_2:72109906-72109925 | None:intergenic | 20.0% |
| !! | AAAATTGTAAGTCCTTTAAA+AGG | + | chr8_2:72109923-72109942 | Msa1267020:intron | 20.0% |
| !! | CATTACAATAAGAAAGAAAA+TGG | - | chr8_2:72110200-72110219 | None:intergenic | 20.0% |
| !! | ACTTGAGATCAAAATTATTT+AGG | + | chr8_2:72110235-72110254 | Msa1267020:intron | 20.0% |
| !! | TATACATTACAAATTTCCTT+TGG | + | chr8_2:72110265-72110284 | Msa1267020:intron | 20.0% |
| !! | AATAAGAATTATTACCTCTT+GGG | - | chr8_2:72110499-72110518 | None:intergenic | 20.0% |
| !!! | ATATTTTTTTGTCAATTGGA+AGG | - | chr8_2:72110987-72111006 | None:intergenic | 20.0% |
| !!! | TTTTTCAAAAAAATTGGAGA+AGG | + | chr8_2:72111136-72111155 | Msa1267020:intron | 20.0% |
| !!! | TTTTCAAAAAAATTGGAGAA+GGG | + | chr8_2:72111137-72111156 | Msa1267020:intron | 20.0% |
| !! | GAATTTCTTACTAAATATTC+TGG | + | chr8_2:72111296-72111315 | Msa1267020:intron | 20.0% |
| !! | ATTAACTTCATAATCAATCT+GGG | - | chr8_2:72111652-72111671 | None:intergenic | 20.0% |
| !! | AGATTGATTATGAAGTTAAT+GGG | + | chr8_2:72111652-72111671 | Msa1267020:CDS | 20.0% |
| !! | CTCAAAAAACAAAACTATAA+AGG | - | chr8_2:72111869-72111888 | None:intergenic | 20.0% |
| !!! | CTTTATAGTTTTGTTTTTTG+AGG | + | chr8_2:72111867-72111886 | Msa1267020:intron | 20.0% |
| !!! | TAGTTTTCTTAATCATATAG+TGG | + | chr8_2:72112015-72112034 | Msa1267020:intron | 20.0% |
| !!! | CTAATTTTAATATTCTGTGT+AGG | + | chr8_2:72112045-72112064 | Msa1267020:intron | 20.0% |
| !! | TACACCAAACAAATTTAATA+TGG | - | chr8_2:72112597-72112616 | None:intergenic | 20.0% |
| !! | AAATCTTAAAATCATCCATT+AGG | - | chr8_2:72112737-72112756 | None:intergenic | 20.0% |
| !!! | AATGGATGATTTTAAGATTT+AGG | + | chr8_2:72112737-72112756 | Msa1267020:three_prime_UTR | 20.0% |
| !!! | ATGGATGATTTTAAGATTTA+GGG | + | chr8_2:72112738-72112757 | Msa1267020:three_prime_UTR | 20.0% |
| !!! | AAAATTGTTATTTTGGGTCA+AGG | - | chr8_2:72107893-72107912 | None:intergenic | 25.0% |
| ! | GATCTCAACAATAAATTTGT+CGG | - | chr8_2:72107933-72107952 | None:intergenic | 25.0% |
| ! | ATCAAATCAAATTCCGAAAT+TGG | - | chr8_2:72108212-72108231 | None:intergenic | 25.0% |
| ! | TTATTCAAATTTGATCGGAT+CGG | + | chr8_2:72108231-72108250 | Msa1267020:intron | 25.0% |
| !!! | AACTGATAAATTTGGGATTT+TGG | - | chr8_2:72108276-72108295 | None:intergenic | 25.0% |
| ! | AAAATCATCTTATGCATGAA+TGG | + | chr8_2:72108401-72108420 | Msa1267020:intron | 25.0% |
| ! | CATCACTATAAAATTCATCA+AGG | - | chr8_2:72108610-72108629 | None:intergenic | 25.0% |
| !!! | AGTGATGTTTTTTTGTATGT+AGG | + | chr8_2:72108623-72108642 | Msa1267020:intron | 25.0% |
| ! | ATGATACGTTATCACATTTA+TGG | - | chr8_2:72108877-72108896 | None:intergenic | 25.0% |
| !! | AAATGTGATAACGTATCATT+AGG | + | chr8_2:72108878-72108897 | Msa1267020:intron | 25.0% |
| ! | AAGAAATTCTTTCTAATGTG+AGG | + | chr8_2:72108902-72108921 | Msa1267020:intron | 25.0% |
| !! | GTTTCTTCTATAGTTTTTCT+AGG | - | chr8_2:72108957-72108976 | None:intergenic | 25.0% |
| !! | TAATGAGTTGGAATGAAATA+TGG | + | chr8_2:72108998-72109017 | Msa1267020:intron | 25.0% |
| !! | TACTATTTCTTACTCAATCA+CGG | - | chr8_2:72109129-72109148 | None:intergenic | 25.0% |
| ! | AAATAGTATTCAACGTGAAA+TGG | + | chr8_2:72109141-72109160 | Msa1267020:intron | 25.0% |
| ! | GATATGTCAGGAATATAAAA+CGG | + | chr8_2:72109267-72109286 | Msa1267020:intron | 25.0% |
| ! | ATAGTTTATAGTTGAGTTTC+AGG | + | chr8_2:72109298-72109317 | Msa1267020:intron | 25.0% |
| ! | ACATCCGTTTAAAAGAAATT+AGG | + | chr8_2:72109344-72109363 | Msa1267020:intron | 25.0% |
| !!! | TTTTTTCCTATTTGGTTACA+TGG | + | chr8_2:72109535-72109554 | Msa1267020:intron | 25.0% |
| !! | TTTTTCCTATTTGGTTACAT+GGG | + | chr8_2:72109536-72109555 | Msa1267020:intron | 25.0% |
| !!! | ATATTTTGATTGACTTGTTC+TGG | + | chr8_2:72109687-72109706 | Msa1267020:intron | 25.0% |
| ! | ACTCTTGTATATAGCTTAAA+AGG | - | chr8_2:72109728-72109747 | None:intergenic | 25.0% |
| !!! | ATTGTTGTTTTTCGGTTTTA+AGG | - | chr8_2:72109824-72109843 | None:intergenic | 25.0% |
| ! | AACAACAATTTAAGAGTCAA+AGG | + | chr8_2:72109835-72109854 | Msa1267020:intron | 25.0% |
| ! | TAATAAATATGTTGAGGGAT+CGG | - | chr8_2:72109900-72109919 | None:intergenic | 25.0% |
| ! | AATAAATATAGCATCAATCC+AGG | - | chr8_2:72110009-72110028 | None:intergenic | 25.0% |
| ! | ATAAGAATTATTACCTCTTG+GGG | - | chr8_2:72110498-72110517 | None:intergenic | 25.0% |
| ! | CAATAAGAATTATTACCTCT+TGG | - | chr8_2:72110500-72110519 | None:intergenic | 25.0% |
| ! | AAAATAGAAAAATGAGTTCG+TGG | - | chr8_2:72110549-72110568 | None:intergenic | 25.0% |
| !!! | TTTTTAGGTTTAGGATTTGA+TGG | - | chr8_2:72110615-72110634 | None:intergenic | 25.0% |
| !!! | TTATCTGTCTTTTTAGGTTT+AGG | - | chr8_2:72110624-72110643 | None:intergenic | 25.0% |
| !! | GATTAATAGACATTTTTGTG+CGG | + | chr8_2:72110695-72110714 | Msa1267020:intron | 25.0% |
| ! | TCTCAACTATTTACTAAAAC+TGG | - | chr8_2:72110748-72110767 | None:intergenic | 25.0% |
| ! | CTGAGATACAAAATACATAT+TGG | - | chr8_2:72110774-72110793 | None:intergenic | 25.0% |
| !! | CAATATGTATTTTGTATCTC+AGG | + | chr8_2:72110772-72110791 | Msa1267020:intron | 25.0% |
| ! | TTTCAAAAAAATTGGAGAAG+GGG | + | chr8_2:72111138-72111157 | Msa1267020:intron | 25.0% |
| ! | TATAGTAAAAAATGCCTTGA+TGG | + | chr8_2:72111326-72111345 | Msa1267020:intron | 25.0% |
| ! | TTAACTTCATAATCAATCTG+GGG | - | chr8_2:72111651-72111670 | None:intergenic | 25.0% |
| ! | CATTAACTTCATAATCAATC+TGG | - | chr8_2:72111653-72111672 | None:intergenic | 25.0% |
| ! | CAGATTGATTATGAAGTTAA+TGG | + | chr8_2:72111651-72111670 | Msa1267020:CDS | 25.0% |
| ! | GATTGATTATGAAGTTAATG+GGG | + | chr8_2:72111653-72111672 | Msa1267020:CDS | 25.0% |
| ! | TATTTGACGTGATACTTATA+GGG | + | chr8_2:72111762-72111781 | Msa1267020:intron | 25.0% |
| ! | TTACGAGAAGCAATAAAAAA+TGG | + | chr8_2:72111786-72111805 | Msa1267020:CDS | 25.0% |
| ! | TGTCAAAAAACTTCTTAATG+AGG | + | chr8_2:72111821-72111840 | Msa1267020:CDS | 25.0% |
| !! | TTTCTTAATCATATAGTGGA+TGG | + | chr8_2:72112019-72112038 | Msa1267020:intron | 25.0% |
| !! | TGATATAGTTTTCATTCTCA+TGG | + | chr8_2:72112087-72112106 | Msa1267020:CDS | 25.0% |
| ! | CAATGATCTTAAAGATAGAT+CGG | + | chr8_2:72112206-72112225 | Msa1267020:intron | 25.0% |
| ! | GATAGATCGGAATAAATAAT+AGG | + | chr8_2:72112219-72112238 | Msa1267020:intron | 25.0% |
| !!! | TTTTATTTGTAGTCCTTATG+TGG | + | chr8_2:72112398-72112417 | Msa1267020:CDS | 25.0% |
| !! | TAATGTTTGAAGCTTTCTTT+GGG | - | chr8_2:72112427-72112446 | None:intergenic | 25.0% |
| ! | TTAAAATCATCCATTAGGAT+GGG | - | chr8_2:72112732-72112751 | None:intergenic | 25.0% |
| CTTCTCTTCATTTCCAATTT+CGG | + | chr8_2:72108196-72108215 | Msa1267020:intron | 30.0% | |
| ! | CTATACTGTATACTTTTGTG+TGG | + | chr8_2:72108460-72108479 | Msa1267020:intron | 30.0% |
| TAACTTCAGGGTAATATTAG+TGG | + | chr8_2:72108575-72108594 | Msa1267020:intron | 30.0% | |
| AGATGTAGAGATTAATGAGT+TGG | + | chr8_2:72108986-72109005 | Msa1267020:intron | 30.0% | |
| ! | TTGTTGTTGTACATTGAGTA+GGG | + | chr8_2:72109095-72109114 | Msa1267020:intron | 30.0% |
| AGTATGTTTGCAAAGACTTT+GGG | - | chr8_2:72109201-72109220 | None:intergenic | 30.0% | |
| AAGTATGTTTGCAAAGACTT+TGG | - | chr8_2:72109202-72109221 | None:intergenic | 30.0% | |
| AGCTATATACAAGAGTTGTA+AGG | + | chr8_2:72109732-72109751 | Msa1267020:intron | 30.0% | |
| TAAAGAACATCACAAAGACA+TGG | + | chr8_2:72109769-72109788 | Msa1267020:intron | 30.0% | |
| ACAAAGACATGGATGAATTA+TGG | + | chr8_2:72109780-72109799 | Msa1267020:intron | 30.0% | |
| CAAAGACATGGATGAATTAT+GGG | + | chr8_2:72109781-72109800 | Msa1267020:intron | 30.0% | |
| AAAGACATGGATGAATTATG+GGG | + | chr8_2:72109782-72109801 | Msa1267020:intron | 30.0% | |
| GAGAACAAAGAATACATCAA+TGG | + | chr8_2:72109863-72109882 | Msa1267020:intron | 30.0% | |
| AATAAATATGTTGAGGGATC+GGG | - | chr8_2:72109899-72109918 | None:intergenic | 30.0% | |
| ! | TTTTATTCCTCTTACATCAG+TGG | + | chr8_2:72110072-72110091 | Msa1267020:intron | 30.0% |
| !! | GCTTTAAGTTGAATGAACAA+TGG | - | chr8_2:72110127-72110146 | None:intergenic | 30.0% |
| TTCGTGGATTTCATCATAAA+AGG | - | chr8_2:72110533-72110552 | None:intergenic | 30.0% | |
| !! | GAAGCATTATCTGTCTTTTT+AGG | - | chr8_2:72110630-72110649 | None:intergenic | 30.0% |
| AGATTTGTATCCACATAAGT+TGG | - | chr8_2:72110812-72110831 | None:intergenic | 30.0% | |
| AACTTATGTGGATACAAATC+TGG | + | chr8_2:72110811-72110830 | Msa1267020:intron | 30.0% | |
| ! | TTAACATCTTTTACTCCACA+TGG | - | chr8_2:72110837-72110856 | None:intergenic | 30.0% |
| TGTATGAACTATACATGTTG+AGG | - | chr8_2:72110897-72110916 | None:intergenic | 30.0% | |
| !! | GAAGGTCAATTTCACTTTTA+GGG | - | chr8_2:72110969-72110988 | None:intergenic | 30.0% |
| ATCGCATGTTATAAATTCCT+TGG | + | chr8_2:72111012-72111031 | Msa1267020:intron | 30.0% | |
| ! | AAACGCTTTTCTCAAAGTAT+AGG | - | chr8_2:72111089-72111108 | None:intergenic | 30.0% |
| TTTCTCACTGAAAATAAGGA+GGG | + | chr8_2:72111106-72111125 | Msa1267020:intron | 30.0% | |
| TTCAAAAAAATTGGAGAAGG+GGG | + | chr8_2:72111139-72111158 | Msa1267020:intron | 30.0% | |
| TAGTATGCAGAAATTCCTTT+AGG | + | chr8_2:72111434-72111453 | Msa1267020:intron | 30.0% | |
| GTTAATGTTCAGTATCCTAA+AGG | - | chr8_2:72111452-72111471 | None:intergenic | 30.0% | |
| GTATTTGACGTGATACTTAT+AGG | + | chr8_2:72111761-72111780 | Msa1267020:intron | 30.0% | |
| ! | AGTTTTCATTCTCATGGATT+CGG | + | chr8_2:72112093-72112112 | Msa1267020:CDS | 30.0% |
| !! | TATCTTTAAGATCATTGCAG+AGG | - | chr8_2:72112203-72112222 | None:intergenic | 30.0% |
| AAAATGAAGATGCAAGAAAG+TGG | + | chr8_2:72112341-72112360 | Msa1267020:CDS | 30.0% | |
| ! | AATGTTTGAAGCTTTCTTTG+GGG | - | chr8_2:72112426-72112445 | None:intergenic | 30.0% |
| ! | GTAATGTTTGAAGCTTTCTT+TGG | - | chr8_2:72112428-72112447 | None:intergenic | 30.0% |
| AAGAAAGCTTCAAACATTAC+CGG | + | chr8_2:72112428-72112447 | Msa1267020:CDS | 30.0% | |
| CTTAAAATCATCCATTAGGA+TGG | - | chr8_2:72112733-72112752 | None:intergenic | 30.0% | |
| ! | TGATTTTTGTGTTGAACCTT+GGG | + | chr8_2:72112783-72112802 | Msa1267020:three_prime_UTR | 30.0% |
| TCATTGCTTCATTGAAGAAG+AGG | - | chr8_2:72107967-72107986 | None:intergenic | 35.0% | |
| CAAATCATTGCAGAGTACAA+AGG | - | chr8_2:72107996-72108015 | None:intergenic | 35.0% | |
| ATGTAGGCTTTACCACAATT+TGG | + | chr8_2:72108639-72108658 | Msa1267020:intron | 35.0% | |
| TTCGAGTAAATGCCAAATTG+TGG | - | chr8_2:72108654-72108673 | None:intergenic | 35.0% | |
| ! | GTTGTTGTTGTACATTGAGT+AGG | + | chr8_2:72109094-72109113 | Msa1267020:intron | 35.0% |
| ! | TCAACGTGAAATGGATTTCT+TGG | + | chr8_2:72109150-72109169 | Msa1267020:intron | 35.0% |
| ! | CTATTTTCTCCTTCTCTAAG+TGG | - | chr8_2:72109376-72109395 | None:intergenic | 35.0% |
| TAGAGAAGGAGAAAATAGCA+AGG | + | chr8_2:72109378-72109397 | Msa1267020:intron | 35.0% | |
| ACATAAATAGATCCAGAGAC+TGG | + | chr8_2:72109467-72109486 | Msa1267020:intron | 35.0% | |
| ACCTAGAAATGCATCAAACT+GGG | + | chr8_2:72109570-72109589 | Msa1267020:intron | 35.0% | |
| ! | GTAGACGAAAGTCCTTTTAA+AGG | - | chr8_2:72109938-72109957 | None:intergenic | 35.0% |
| CAGGTAACTCTTGAAAGATT+AGG | - | chr8_2:72109990-72110009 | None:intergenic | 35.0% | |
| CTAATCTTTCAAGAGTTACC+TGG | + | chr8_2:72109988-72110007 | Msa1267020:intron | 35.0% | |
| ATGTTGAGGAAAAGAGAATG+TGG | - | chr8_2:72110883-72110902 | None:intergenic | 35.0% | |
| !! | TTTTAGAAGCTCGTTACTCT+TGG | + | chr8_2:72110928-72110947 | Msa1267020:intron | 35.0% |
| !! | GGAAGGTCAATTTCACTTTT+AGG | - | chr8_2:72110970-72110989 | None:intergenic | 35.0% |
| TTCCTTGGTTGAGATAGTAA+TGG | + | chr8_2:72111027-72111046 | Msa1267020:intron | 35.0% | |
| TCCTTGGTTGAGATAGTAAT+GGG | + | chr8_2:72111028-72111047 | Msa1267020:intron | 35.0% | |
| AGCGTTTCTCACTGAAAATA+AGG | + | chr8_2:72111102-72111121 | Msa1267020:intron | 35.0% | |
| GTTTCTCACTGAAAATAAGG+AGG | + | chr8_2:72111105-72111124 | Msa1267020:intron | 35.0% | |
| TTCTCACTGAAAATAAGGAG+GGG | + | chr8_2:72111107-72111126 | Msa1267020:intron | 35.0% | |
| GTTTGACCTTGTAACTTCAA+GGG | - | chr8_2:72111235-72111254 | None:intergenic | 35.0% | |
| AGTTTGACCTTGTAACTTCA+AGG | - | chr8_2:72111236-72111255 | None:intergenic | 35.0% | |
| ! | GTAAAAAATGCCTTGATGGT+TGG | + | chr8_2:72111330-72111349 | Msa1267020:intron | 35.0% |
| TGATTATGAAGTTAATGGGG+AGG | + | chr8_2:72111656-72111675 | Msa1267020:CDS | 35.0% | |
| TTTGAGGGAAGTAGTATTCA+TGG | + | chr8_2:72111883-72111902 | Msa1267020:intron | 35.0% | |
| TTGAGGGAAGTAGTATTCAT+GGG | + | chr8_2:72111884-72111903 | Msa1267020:intron | 35.0% | |
| TGCTAATTACAGAGATAAGC+AGG | + | chr8_2:72111932-72111951 | Msa1267020:CDS | 35.0% | |
| GCTAATTACAGAGATAAGCA+GGG | + | chr8_2:72111933-72111952 | Msa1267020:CDS | 35.0% | |
| ! | GTTTTCATTCTCATGGATTC+GGG | + | chr8_2:72112094-72112113 | Msa1267020:CDS | 35.0% |
| ! | TTTTCATTCTCATGGATTCG+GGG | + | chr8_2:72112095-72112114 | Msa1267020:CDS | 35.0% |
| ! | CTTGTGCATTTTTATACTCC+AGG | - | chr8_2:72112126-72112145 | None:intergenic | 35.0% |
| CTGGAGTATAAAAATGCACA+AGG | + | chr8_2:72112124-72112143 | Msa1267020:CDS | 35.0% | |
| TAACTCACTGCTTCTTATTC+AGG | + | chr8_2:72112272-72112291 | Msa1267020:intron | 35.0% | |
| ! | ATTTTGTATTGCAGTGTAGC+CGG | - | chr8_2:72112320-72112339 | None:intergenic | 35.0% |
| TTCAAACATTACCGGCATTT+AGG | + | chr8_2:72112436-72112455 | Msa1267020:CDS | 35.0% | |
| GTCTATGATGTGTCTTACAT+AGG | - | chr8_2:72112569-72112588 | None:intergenic | 35.0% | |
| ! | TACCCTTTAAAAAATGCCCA+GGG | - | chr8_2:72112684-72112703 | None:intergenic | 35.0% |
| ! | TTACCCTTTAAAAAATGCCC+AGG | - | chr8_2:72112685-72112704 | None:intergenic | 35.0% |
| ! | ACTTTTTACACCCATCCTAA+TGG | + | chr8_2:72112719-72112738 | Msa1267020:three_prime_UTR | 35.0% |
| ! | GTGATTTTTGTGTTGAACCT+TGG | + | chr8_2:72112782-72112801 | Msa1267020:three_prime_UTR | 35.0% |
| ! | GATTTTTGTGTTGAACCTTG+GGG | + | chr8_2:72112784-72112803 | Msa1267020:three_prime_UTR | 35.0% |
| AAACCTGACTTACCTTTAGT+GGG | - | chr8_2:72112843-72112862 | None:intergenic | 35.0% | |
| AAAACCTGACTTACCTTTAG+TGG | - | chr8_2:72112844-72112863 | None:intergenic | 35.0% | |
| ! | CTAAAGGTAAGTCAGGTTTT+TGG | + | chr8_2:72112844-72112863 | Msa1267020:three_prime_UTR | 35.0% |
| AGCATCATTGTCGTTGTTGT+GGG | + | chr8_2:72108498-72108517 | Msa1267020:intron | 40.0% | |
| ATTGTGCAGCGAACATTCAT+CGG | + | chr8_2:72108526-72108545 | Msa1267020:CDS | 40.0% | |
| CGAACATTCATCGGATCAAA+TGG | + | chr8_2:72108535-72108554 | Msa1267020:CDS | 40.0% | |
| CTGATTGTTTCAACAACTCG+CGG | + | chr8_2:72108688-72108707 | Msa1267020:CDS | 40.0% | |
| GAGGATAGTTAGATCACTAG+CGG | + | chr8_2:72108921-72108940 | Msa1267020:intron | 40.0% | |
| TGTCAGGAATATAAAACGGC+TGG | + | chr8_2:72109271-72109290 | Msa1267020:intron | 40.0% | |
| GAGAAAATAGCAAGGACTTG+TGG | + | chr8_2:72109386-72109405 | Msa1267020:intron | 40.0% | |
| GACCTAGAAATGCATCAAAC+TGG | + | chr8_2:72109569-72109588 | Msa1267020:intron | 40.0% | |
| ACCCAGTTTGATGCATTTCT+AGG | - | chr8_2:72109574-72109593 | None:intergenic | 40.0% | |
| CATGTGAGCTATCAGCTATA+TGG | + | chr8_2:72109601-72109620 | Msa1267020:intron | 40.0% | |
| !!! | AAAGCTCGAGAGCATTTTCA+AGG | - | chr8_2:72109658-72109677 | None:intergenic | 40.0% |
| CTCTTGAAAGATTAGGTGCT+TGG | - | chr8_2:72109983-72110002 | None:intergenic | 40.0% | |
| CTCATCTCATTTCTCAACGT+TGG | + | chr8_2:72110146-72110165 | Msa1267020:intron | 40.0% | |
| AATTTCCTTTGGCACAGATC+TGG | + | chr8_2:72110276-72110295 | Msa1267020:intron | 40.0% | |
| ATTTCCTTTGGCACAGATCT+GGG | + | chr8_2:72110277-72110296 | Msa1267020:intron | 40.0% | |
| GTACGACAAACTTCTTCAGA+CGG | + | chr8_2:72110306-72110325 | Msa1267020:CDS | 40.0% | |
| GCAAGGTTATTATCTGCAGT+TGG | - | chr8_2:72110399-72110418 | None:intergenic | 40.0% | |
| GCAGATAATAACCTTGCATC+AGG | + | chr8_2:72110402-72110421 | Msa1267020:CDS | 40.0% | |
| ACTTCTTCTGTCACGAAGAA+TGG | - | chr8_2:72110572-72110591 | None:intergenic | 40.0% | |
| TTGATGGAGCTGTAACAACT+GGG | - | chr8_2:72110599-72110618 | None:intergenic | 40.0% | |
| TTTGATGGAGCTGTAACAAC+TGG | - | chr8_2:72110600-72110619 | None:intergenic | 40.0% | |
| TTCCACGAACAAGTTTAGGT+AGG | + | chr8_2:72110668-72110687 | Msa1267020:intron | 40.0% | |
| TCCACGAACAAGTTTAGGTA+GGG | + | chr8_2:72110669-72110688 | Msa1267020:intron | 40.0% | |
| CGATCATTCTCCAACTTATG+TGG | + | chr8_2:72110799-72110818 | Msa1267020:intron | 40.0% | |
| CCTTGGTTGAGATAGTAATG+GGG | + | chr8_2:72111029-72111048 | Msa1267020:intron | 40.0% | |
| GACACATCGTGGACAAAATA+AGG | + | chr8_2:72111270-72111289 | Msa1267020:intron | 40.0% | |
| TACCAGTAGTTACATGACCA+GGG | - | chr8_2:72111617-72111636 | None:intergenic | 40.0% | |
| ATGGGTTTCTATACACATGC+AGG | + | chr8_2:72111902-72111921 | Msa1267020:intron | 40.0% | |
| TGGGTTTCTATACACATGCA+GGG | + | chr8_2:72111903-72111922 | Msa1267020:intron | 40.0% | |
| GGGACTGTCTTTATTGCATT+TGG | + | chr8_2:72111953-72111972 | Msa1267020:CDS | 40.0% | |
| TTTCATTCTCATGGATTCGG+GGG | + | chr8_2:72112096-72112115 | Msa1267020:CDS | 40.0% | |
| CCATTGGCAGAATTTAAGGA+AGG | - | chr8_2:72112164-72112183 | None:intergenic | 40.0% | |
| CCTTCCTTAAATTCTGCCAA+TGG | + | chr8_2:72112161-72112180 | Msa1267020:CDS | 40.0% | |
| ACTGCCATTGGCAGAATTTA+AGG | - | chr8_2:72112168-72112187 | None:intergenic | 40.0% | |
| TAAGATCATTGCAGAGGATC+CGG | - | chr8_2:72112197-72112216 | None:intergenic | 40.0% | |
| AAAGTGGAGCAATGGATCAA+AGG | + | chr8_2:72112357-72112376 | Msa1267020:CDS | 40.0% | |
| ! | TTTCTTTGGGGAACCACATA+AGG | - | chr8_2:72112414-72112433 | None:intergenic | 40.0% |
| GGTACAGAGAAAGATAGTAC+AGG | - | chr8_2:72112660-72112679 | None:intergenic | 40.0% | |
| !!! | CACCCTGGGCATTTTTTAAA+GGG | + | chr8_2:72112679-72112698 | Msa1267020:three_prime_UTR | 40.0% |
| AAAAATGTGGTTGGGAGGAA+AGG | + | chr8_2:72112811-72112830 | Msa1267020:three_prime_UTR | 40.0% | |
| AACCTGACTTACCTTTAGTG+GGG | - | chr8_2:72112842-72112861 | None:intergenic | 40.0% | |
| GTTGCAGTTTCAACACCTTC+AGG | + | chr8_2:72108152-72108171 | Msa1267020:CDS | 45.0% | |
| GTTTCAACACCTTCAGGAGA+CGG | + | chr8_2:72108158-72108177 | Msa1267020:CDS | 45.0% | |
| TTTCAACACCTTCAGGAGAC+GGG | + | chr8_2:72108159-72108178 | Msa1267020:CDS | 45.0% | |
| CAGCATCATTGTCGTTGTTG+TGG | + | chr8_2:72108497-72108516 | Msa1267020:intron | 45.0% | |
| AACACGCTACAAAGTTAGCG+AGG | - | chr8_2:72108724-72108743 | None:intergenic | 45.0% | |
| AGATCACTAGCGGCAATTGA+AGG | + | chr8_2:72108931-72108950 | Msa1267020:intron | 45.0% | |
| TCTTACTCAATCACGGAGAC+AGG | - | chr8_2:72109122-72109141 | None:intergenic | 45.0% | |
| AGGAACTGACCACTTAGAGA+AGG | + | chr8_2:72109364-72109383 | Msa1267020:intron | 45.0% | |
| CGACTCCCATGTAACCAAAT+AGG | - | chr8_2:72109544-72109563 | None:intergenic | 45.0% | |
| TGCTTGGCTTCTACTTGGAA+TGG | - | chr8_2:72109967-72109986 | None:intergenic | 45.0% | |
| TTAGGTGCTTGGCTTCTACT+TGG | - | chr8_2:72109972-72109991 | None:intergenic | 45.0% | |
| TTGCAGTCCACTGATGTAAG+AGG | - | chr8_2:72110082-72110101 | None:intergenic | 45.0% | |
| ACTCTTTAACGCCTGATGCA+AGG | - | chr8_2:72110416-72110435 | None:intergenic | 45.0% | |
| ! | GGCGTTAAAGAGTGTAAGTG+TGG | + | chr8_2:72110423-72110442 | Msa1267020:CDS | 45.0% |
| GGAGCTTCACAAATGCAAAG+AGG | - | chr8_2:72110453-72110472 | None:intergenic | 45.0% | |
| ! | CCTAAACTTGTTCGTGGAAC+TGG | - | chr8_2:72110667-72110686 | None:intergenic | 45.0% |
| CCAGTTCCACGAACAAGTTT+AGG | + | chr8_2:72110664-72110683 | Msa1267020:CDS | 45.0% | |
| ! | TCCCTACCTAAACTTGTTCG+TGG | - | chr8_2:72110673-72110692 | None:intergenic | 45.0% |
| TGGATACAAATCTGGCCATG+TGG | + | chr8_2:72110819-72110838 | Msa1267020:intron | 45.0% | |
| CCCCATTACTATCTCAACCA+AGG | - | chr8_2:72111032-72111051 | None:intergenic | 45.0% | |
| ! | GGTTGAGATAGTAATGGGGA+AGG | + | chr8_2:72111033-72111052 | Msa1267020:intron | 45.0% |
| ACCTCTTACAAATTCCCCCA+AGG | + | chr8_2:72111194-72111213 | Msa1267020:intron | 45.0% | |
| CCTCTTACAAATTCCCCCAA+GGG | + | chr8_2:72111195-72111214 | Msa1267020:intron | 45.0% | |
| CTCTTACAAATTCCCCCAAG+GGG | + | chr8_2:72111196-72111215 | Msa1267020:intron | 45.0% | |
| GACCTTGTAACTTCAAGGGA+CGG | - | chr8_2:72111231-72111250 | None:intergenic | 45.0% | |
| ACACAATCAGCCAACCATCA+AGG | - | chr8_2:72111343-72111362 | None:intergenic | 45.0% | |
| TGCAGTTCTACGTTTAACCC+TGG | + | chr8_2:72111597-72111616 | Msa1267020:intron | 45.0% | |
| AACCCTGGTCATGTAACTAC+TGG | + | chr8_2:72111612-72111631 | Msa1267020:CDS | 45.0% | |
| GTACCAGTAGTTACATGACC+AGG | - | chr8_2:72111618-72111637 | None:intergenic | 45.0% | |
| ! | ATCAATCTGGGGTCTGTTTG+AGG | - | chr8_2:72111640-72111659 | None:intergenic | 45.0% |
| TTCTATACACATGCAGGGTG+TGG | + | chr8_2:72111908-72111927 | Msa1267020:intron | 45.0% | |
| TCTTCAGCATGTTTGTGCTC+AGG | + | chr8_2:72111986-72112005 | Msa1267020:intron | 45.0% | |
| AAGATCATTGCAGAGGATCC+GGG | - | chr8_2:72112196-72112215 | None:intergenic | 45.0% | |
| AACACCTTTAGACTGTGCTC+CGG | + | chr8_2:72112298-72112317 | Msa1267020:CDS | 45.0% | |
| GATGCAAGAAAGTGGAGCAA+TGG | + | chr8_2:72112349-72112368 | Msa1267020:CDS | 45.0% | |
| CCGTATCACAACCTAAATGC+CGG | - | chr8_2:72112450-72112469 | None:intergenic | 45.0% | |
| !! | CCGGCATTTAGGTTGTGATA+CGG | + | chr8_2:72112447-72112466 | Msa1267020:CDS | 45.0% |
| TATCTTTCTCTGTACCACCC+TGG | + | chr8_2:72112664-72112683 | Msa1267020:three_prime_UTR | 45.0% | |
| ATCTTTCTCTGTACCACCCT+GGG | + | chr8_2:72112665-72112684 | Msa1267020:three_prime_UTR | 45.0% | |
| ! | CCTTTAAAAAATGCCCAGGG+TGG | - | chr8_2:72112681-72112700 | None:intergenic | 45.0% |
| !!! | CCACCCTGGGCATTTTTTAA+AGG | + | chr8_2:72112678-72112697 | Msa1267020:three_prime_UTR | 45.0% |
| TTTGTGTTGAACCTTGGGGA+TGG | + | chr8_2:72112788-72112807 | Msa1267020:three_prime_UTR | 45.0% | |
| ACCTTGGGGATGGAAAAATG+TGG | + | chr8_2:72112798-72112817 | Msa1267020:three_prime_UTR | 45.0% | |
| ! | ACCACATTTTTCCATCCCCA+AGG | - | chr8_2:72112802-72112821 | None:intergenic | 45.0% |
| TGGGGATGGAAAAATGTGGT+TGG | + | chr8_2:72112802-72112821 | Msa1267020:three_prime_UTR | 45.0% | |
| GGGGATGGAAAAATGTGGTT+GGG | + | chr8_2:72112803-72112822 | Msa1267020:three_prime_UTR | 45.0% | |
| GATGGAAAAATGTGGTTGGG+AGG | + | chr8_2:72112806-72112825 | Msa1267020:three_prime_UTR | 45.0% | |
| GAAAGGAAAGACCCCACTAA+AGG | + | chr8_2:72112828-72112847 | Msa1267020:three_prime_UTR | 45.0% | |
| !!! | AAATAAAAAATTGTTATTTT+GGG | - | chr8_2:72107899-72107918 | None:intergenic | 5.0% |
| !!! | TAAATAAAAAATTGTTATTT+TGG | - | chr8_2:72107900-72107919 | None:intergenic | 5.0% |
| !! | ATATTTATTAATAATTTATC+TGG | + | chr8_2:72110020-72110039 | Msa1267020:intron | 5.0% |
| !!! | ATTTTTTTTTTCAAAAAAAT+TGG | + | chr8_2:72111130-72111149 | Msa1267020:intron | 5.0% |
| !! | CATCGTGCTGCTTCTTGGAA+AGG | - | chr8_2:72108121-72108140 | None:intergenic | 50.0% |
| !! | CAACACATCGTGCTGCTTCT+TGG | - | chr8_2:72108126-72108145 | None:intergenic | 50.0% |
| AAAGCATACCCGTCTCCTGA+AGG | - | chr8_2:72108170-72108189 | None:intergenic | 50.0% | |
| ! | ACATAGTGGGGTCAGCTACA+TGG | - | chr8_2:72109055-72109074 | None:intergenic | 50.0% |
| ATGTAGCTGACCCCACTATG+TGG | + | chr8_2:72109054-72109073 | Msa1267020:intron | 50.0% | |
| TGTAGCTGACCCCACTATGT+GGG | + | chr8_2:72109055-72109074 | Msa1267020:intron | 50.0% | |
| ! | AAGCCTTGTCCCACATAGTG+GGG | - | chr8_2:72109067-72109086 | None:intergenic | 50.0% |
| ! | CAAGCCTTGTCCCACATAGT+GGG | - | chr8_2:72109068-72109087 | None:intergenic | 50.0% |
| AAAGACACGCAACCAGTCTC+TGG | - | chr8_2:72109482-72109501 | None:intergenic | 50.0% | |
| TGGAGCTGTAACAACTGGGA+TGG | - | chr8_2:72110595-72110614 | None:intergenic | 50.0% | |
| CCCTTGGGGGAATTTGTAAG+AGG | - | chr8_2:72111198-72111217 | None:intergenic | 50.0% | |
| ACGGAGTTTGAATCCCCTTG+GGG | - | chr8_2:72111212-72111231 | None:intergenic | 50.0% | |
| GACGGAGTTTGAATCCCCTT+GGG | - | chr8_2:72111213-72111232 | None:intergenic | 50.0% | |
| CTCCGTCCCTTGAAGTTACA+AGG | + | chr8_2:72111226-72111245 | Msa1267020:intron | 50.0% | |
| ACCTTTGAGCTGACACATCG+TGG | + | chr8_2:72111259-72111278 | Msa1267020:intron | 50.0% | |
| TCCACGATGTGTCAGCTCAA+AGG | - | chr8_2:72111263-72111282 | None:intergenic | 50.0% | |
| GGCATGTTGCGAAGAGAACT+TGG | + | chr8_2:72111719-72111738 | Msa1267020:intron | 50.0% | |
| TAGGTTGTGATACGGCTCTC+TGG | + | chr8_2:72112455-72112474 | Msa1267020:CDS | 50.0% | |
| AGGTTGTGATACGGCTCTCT+GGG | + | chr8_2:72112456-72112475 | Msa1267020:CDS | 50.0% | |
| GACCCCACTAAAGGTAAGTC+AGG | + | chr8_2:72112837-72112856 | Msa1267020:three_prime_UTR | 50.0% | |
| GCTGCTTCTTGGAAAGGAGG+AGG | - | chr8_2:72108115-72108134 | None:intergenic | 55.0% | |
| !! | CGTGCTGCTTCTTGGAAAGG+AGG | - | chr8_2:72108118-72108137 | None:intergenic | 55.0% |
| TGACCCCACTATGTGGGACA+AGG | + | chr8_2:72109061-72109080 | Msa1267020:intron | 55.0% | |
| ! | CCAAGCCTTGTCCCACATAG+TGG | - | chr8_2:72109069-72109088 | None:intergenic | 55.0% |
| CCACTATGTGGGACAAGGCT+TGG | + | chr8_2:72109066-72109085 | Msa1267020:intron | 55.0% | |
| CCTTCCCAGATCTGTGCCAA+AGG | - | chr8_2:72110284-72110303 | None:intergenic | 55.0% | |
| CCTTTGGCACAGATCTGGGA+AGG | + | chr8_2:72110281-72110300 | Msa1267020:intron | 55.0% | |
| GGAACTGCAGAAGAGGAAGG+GGG | - | chr8_2:72110477-72110496 | None:intergenic | 55.0% | |
| GGGAACTGCAGAAGAGGAAG+GGG | - | chr8_2:72110478-72110497 | None:intergenic | 55.0% | |
| GGGGAACTGCAGAAGAGGAA+GGG | - | chr8_2:72110479-72110498 | None:intergenic | 55.0% | |
| TGGGGAACTGCAGAAGAGGA+AGG | - | chr8_2:72110480-72110499 | None:intergenic | 55.0% | |
| CTCTTGGGGAACTGCAGAAG+AGG | - | chr8_2:72110484-72110503 | None:intergenic | 55.0% | |
| CTCTTCTGCAGTTCCCCAAG+AGG | + | chr8_2:72110482-72110501 | Msa1267020:CDS | 55.0% | |
| AGGCTTCAGCTGACGAGACA+TGG | - | chr8_2:72111069-72111088 | None:intergenic | 55.0% | |
| CGGAGTTTGAATCCCCTTGG+GGG | - | chr8_2:72111211-72111230 | None:intergenic | 55.0% | |
| GGACGGAGTTTGAATCCCCT+TGG | - | chr8_2:72111214-72111233 | None:intergenic | 55.0% | |
| ! | TGCCAATGGCAGTTTTCGCC+CGG | + | chr8_2:72112175-72112194 | Msa1267020:intron | 55.0% |
| ATCCGGGCGAAAACTGCCAT+TGG | - | chr8_2:72112180-72112199 | None:intergenic | 55.0% | |
| GTAGCCGGAGCACAGTCTAA+AGG | - | chr8_2:72112305-72112324 | None:intergenic | 55.0% | |
| ACTGCAGAAGAGGAAGGGGG+AGG | - | chr8_2:72110474-72110493 | None:intergenic | 60.0% | |
| CATGGATTCGGGGGCAAACC+TGG | + | chr8_2:72112105-72112124 | Msa1267020:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 72107890 | 72112899 | 72107890 | ID=Msa1267020;Name=Msa1267020 |
| chr8_2 | mRNA | 72107890 | 72112899 | 72107890 | ID=Msa1267020-mRNA-1;Parent=Msa1267020;Name=Msa1267020-mRNA-1;_AED=0.15;_eAED=0.15;_QI=201|0.88|0.9|1|0.88|0.9|10|407|342 |
| chr8_2 | exon | 72107890 | 72108180 | 72107890 | ID=Msa1267020-mRNA-1:exon:24306;Parent=Msa1267020-mRNA-1 |
| chr8_2 | exon | 72108500 | 72108556 | 72108500 | ID=Msa1267020-mRNA-1:exon:24307;Parent=Msa1267020-mRNA-1 |
| chr8_2 | exon | 72108645 | 72108709 | 72108645 | ID=Msa1267020-mRNA-1:exon:24308;Parent=Msa1267020-mRNA-1 |
| chr8_2 | exon | 72110293 | 72110503 | 72110293 | ID=Msa1267020-mRNA-1:exon:24309;Parent=Msa1267020-mRNA-1 |
| chr8_2 | exon | 72110585 | 72110685 | 72110585 | ID=Msa1267020-mRNA-1:exon:24310;Parent=Msa1267020-mRNA-1 |
| chr8_2 | exon | 72111602 | 72111677 | 72111602 | ID=Msa1267020-mRNA-1:exon:24311;Parent=Msa1267020-mRNA-1 |
| chr8_2 | exon | 72111783 | 72111842 | 72111783 | ID=Msa1267020-mRNA-1:exon:24312;Parent=Msa1267020-mRNA-1 |
| chr8_2 | exon | 72111924 | 72111974 | 72111924 | ID=Msa1267020-mRNA-1:exon:24313;Parent=Msa1267020-mRNA-1 |
| chr8_2 | exon | 72112067 | 72112185 | 72112067 | ID=Msa1267020-mRNA-1:exon:24314;Parent=Msa1267020-mRNA-1 |
| chr8_2 | exon | 72112294 | 72112899 | 72112294 | ID=Msa1267020-mRNA-1:exon:24315;Parent=Msa1267020-mRNA-1 |
| chr8_2 | five_prime_UTR | 72107890 | 72108090 | 72107890 | ID=Msa1267020-mRNA-1:five_prime_utr;Parent=Msa1267020-mRNA-1 |
| chr8_2 | CDS | 72108091 | 72108180 | 72108091 | ID=Msa1267020-mRNA-1:cds;Parent=Msa1267020-mRNA-1 |
| chr8_2 | CDS | 72108500 | 72108556 | 72108500 | ID=Msa1267020-mRNA-1:cds;Parent=Msa1267020-mRNA-1 |
| chr8_2 | CDS | 72108645 | 72108709 | 72108645 | ID=Msa1267020-mRNA-1:cds;Parent=Msa1267020-mRNA-1 |
| chr8_2 | CDS | 72110293 | 72110503 | 72110293 | ID=Msa1267020-mRNA-1:cds;Parent=Msa1267020-mRNA-1 |
| chr8_2 | CDS | 72110585 | 72110685 | 72110585 | ID=Msa1267020-mRNA-1:cds;Parent=Msa1267020-mRNA-1 |
| chr8_2 | CDS | 72111602 | 72111677 | 72111602 | ID=Msa1267020-mRNA-1:cds;Parent=Msa1267020-mRNA-1 |
| chr8_2 | CDS | 72111783 | 72111842 | 72111783 | ID=Msa1267020-mRNA-1:cds;Parent=Msa1267020-mRNA-1 |
| chr8_2 | CDS | 72111924 | 72111974 | 72111924 | ID=Msa1267020-mRNA-1:cds;Parent=Msa1267020-mRNA-1 |
| chr8_2 | CDS | 72112067 | 72112185 | 72112067 | ID=Msa1267020-mRNA-1:cds;Parent=Msa1267020-mRNA-1 |
| chr8_2 | CDS | 72112294 | 72112492 | 72112294 | ID=Msa1267020-mRNA-1:cds;Parent=Msa1267020-mRNA-1 |
| chr8_2 | three_prime_UTR | 72112493 | 72112899 | 72112493 | ID=Msa1267020-mRNA-1:three_prime_utr;Parent=Msa1267020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
