Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0957040 | sp|Q8LPQ6|AB28B_ARATH | 63.800 | 500 | 147 | 3 | 57 | 556 | 58 | 523 | 0.0 | 664 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0957040 | A0A072U9U8 | 91.187 | 556 | 17 | 2 | 1 | 556 | 1 | 524 | 0.0 | 1008 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0034100 | Msa0957040 | 0.802779 | 4.771040e-49 | -8.615850e-47 |
| Msa0037040 | Msa0957040 | 0.816743 | 4.725547e-52 | -8.615850e-47 |
| Msa0069070 | Msa0957040 | 0.812279 | 4.592796e-51 | -8.615850e-47 |
| Msa0069230 | Msa0957040 | 0.831449 | 1.658508e-55 | -8.615850e-47 |
| Msa0081790 | Msa0957040 | 0.837980 | 3.773858e-57 | -8.615850e-47 |
| Msa0634900 | Msa0957040 | 0.803484 | 3.409612e-49 | -8.615850e-47 |
| Msa0644220 | Msa0957040 | 0.821509 | 3.888994e-53 | -8.615850e-47 |
| Msa0673620 | Msa0957040 | 0.804241 | 2.373850e-49 | -8.615850e-47 |
| Msa0676570 | Msa0957040 | 0.813129 | 2.991929e-51 | -8.615850e-47 |
| Msa0684030 | Msa0957040 | 0.827497 | 1.514102e-54 | -8.615850e-47 |
| Msa0688880 | Msa0957040 | 0.805895 | 1.070289e-49 | -8.615850e-47 |
| Msa0693050 | Msa0957040 | 0.805666 | 1.195786e-49 | -8.615850e-47 |
| Msa0733240 | Msa0957040 | 0.805154 | 1.530520e-49 | -8.615850e-47 |
| Msa0752490 | Msa0957040 | 0.832389 | 9.721117e-56 | -8.615850e-47 |
| Msa0770050 | Msa0957040 | 0.816367 | 5.735981e-52 | -8.615850e-47 |
| Msa0774360 | Msa0957040 | 0.827423 | 1.577533e-54 | -8.615850e-47 |
| Msa0793130 | Msa0957040 | 0.800780 | 1.227200e-48 | -8.615850e-47 |
| Msa0793530 | Msa0957040 | 0.806147 | 9.473452e-50 | -8.615850e-47 |
| Msa0808500 | Msa0957040 | 0.807071 | 6.047039e-50 | -8.615850e-47 |
| Msa0812020 | Msa0957040 | 0.835273 | 1.846922e-56 | -8.615850e-47 |
| Msa0823480 | Msa0957040 | 0.801197 | 1.008615e-48 | -8.615850e-47 |
| Msa0122170 | Msa0957040 | 0.808487 | 3.023429e-50 | -8.615850e-47 |
| Msa0128110 | Msa0957040 | 0.819944 | 8.899550e-53 | -8.615850e-47 |
| Msa0133140 | Msa0957040 | 0.811973 | 5.354756e-51 | -8.615850e-47 |
| Msa0136180 | Msa0957040 | 0.803132 | 4.033973e-49 | -8.615850e-47 |
| Msa0208710 | Msa0957040 | 0.816399 | 5.642592e-52 | -8.615850e-47 |
| Msa0213590 | Msa0957040 | 0.800950 | 1.132908e-48 | -8.615850e-47 |
| Msa0378530 | Msa0957040 | 0.801972 | 6.996840e-49 | -8.615850e-47 |
| Msa0433890 | Msa0957040 | 0.808594 | 2.868434e-50 | -8.615850e-47 |
| Msa0267320 | Msa0957040 | 0.807955 | 3.924237e-50 | -8.615850e-47 |
| Msa0560380 | Msa0957040 | 0.819224 | 1.299502e-52 | -8.615850e-47 |
| Msa0852090 | Msa0957040 | 0.809279 | 2.046590e-50 | -8.615850e-47 |
| Msa0906180 | Msa0957040 | 0.844592 | 6.872753e-59 | -8.615850e-47 |
| Msa0938190 | Msa0957040 | 0.804409 | 2.190589e-49 | -8.615850e-47 |
| Msa0957040 | Msa1039440 | 0.816346 | 5.798485e-52 | -8.615850e-47 |
| Msa0957040 | Msa1058590 | 0.813238 | 2.832563e-51 | -8.615850e-47 |
| Msa0957040 | Msa1083620 | 0.817438 | 3.297693e-52 | -8.615850e-47 |
| Msa0957040 | Msa1128610 | 0.801448 | 8.962115e-49 | -8.615850e-47 |
| Msa0957040 | Msa1132250 | 0.810396 | 1.176766e-50 | -8.615850e-47 |
| Msa0957040 | Msa1132900 | 0.808462 | 3.061085e-50 | -8.615850e-47 |
| Msa0957040 | Msa1156060 | 0.814583 | 1.431106e-51 | -8.615850e-47 |
| Msa0957040 | Msa1176830 | 0.822301 | 2.549246e-53 | -8.615850e-47 |
| Msa0957040 | Msa1206510 | 0.801481 | 8.824714e-49 | -8.615850e-47 |
| Msa0957040 | Msa1207770 | 0.802231 | 6.187926e-49 | -8.615850e-47 |
| Msa0957040 | Msa1225240 | 0.801501 | 8.741197e-49 | -8.615850e-47 |
| Msa0957040 | Msa1257860 | 0.815694 | 8.109185e-52 | -8.615850e-47 |
| Msa0957040 | Msa1288380 | 0.800247 | 1.575946e-48 | -8.615850e-47 |
| Msa0957040 | Msa1298170 | 0.801738 | 7.816467e-49 | -8.615850e-47 |
| Msa0957040 | Msa1331530 | 0.812484 | 4.141485e-51 | -8.615850e-47 |
| Msa0957040 | Msa1346220 | 0.806250 | 9.010823e-50 | -8.615850e-47 |
| Msa0957040 | Msa1346340 | 0.812542 | 4.022463e-51 | -8.615850e-47 |
| Msa0957040 | Msa1348180 | 0.800649 | 1.305090e-48 | -8.615850e-47 |
| Msa0957040 | Msa1352600 | 0.810345 | 1.207373e-50 | -8.615850e-47 |
| Msa0957040 | Msa1360070 | 0.849582 | 2.948394e-60 | -8.615850e-47 |
| Msa0957040 | Msa1373420 | 0.801551 | 8.535803e-49 | -8.615850e-47 |
| Msa0957040 | Msa1381340 | 0.845667 | 3.519388e-59 | -8.615850e-47 |
| Msa0957040 | Msa1398150 | 0.803710 | 3.061516e-49 | -8.615850e-47 |
| Msa0957040 | Msa1400290 | 0.826095 | 3.273033e-54 | -8.615850e-47 |
| Msa0957040 | Msa1400830 | 0.809639 | 1.712823e-50 | -8.615850e-47 |
| Msa0957040 | Msa1430460 | 0.806900 | 6.570689e-50 | -8.615850e-47 |
| Msa0957040 | Msa1431510 | 0.802885 | 4.536955e-49 | -8.615850e-47 |
| Msa0957040 | Msa1440990 | 0.816087 | 6.626917e-52 | -8.615850e-47 |
| Msa0957040 | Msa1452230 | 0.828272 | 9.859641e-55 | -8.615850e-47 |
| Msa0957040 | Msa1462210 | 0.847205 | 1.339716e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0957040 | MtrunA17_Chr6g0474071 | 97.744 | 266 | 6 | 0 | 291 | 556 | 1 | 266 | 0.0 | 531 |
| Msa0957040 | MtrunA17_Chr6g0474061 | 95.510 | 245 | 10 | 1 | 1 | 245 | 1 | 244 | 1.52e-166 | 473 |
| Msa0957040 | MtrunA17_Chr4g0061601 | 24.565 | 460 | 251 | 11 | 111 | 556 | 63 | 440 | 9.95e-24 | 105 |
| Msa0957040 | MtrunA17_Chr2g0285311 | 24.635 | 479 | 262 | 15 | 92 | 556 | 685 | 1078 | 8.08e-18 | 87.8 |
| Msa0957040 | MtrunA17_Chr2g0285311 | 60.714 | 56 | 22 | 0 | 501 | 556 | 367 | 422 | 4.61e-14 | 75.5 |
| Msa0957040 | MtrunA17_Chr6g0452171 | 24.611 | 386 | 206 | 8 | 177 | 556 | 767 | 1073 | 1.31e-17 | 87.0 |
| Msa0957040 | MtrunA17_Chr2g0285301 | 23.313 | 489 | 294 | 12 | 76 | 556 | 2 | 417 | 1.94e-17 | 86.3 |
| Msa0957040 | MtrunA17_Chr6g0452041 | 25.000 | 388 | 202 | 10 | 177 | 556 | 766 | 1072 | 1.94e-16 | 83.2 |
| Msa0957040 | MtrunA17_Chr5g0410921 | 24.409 | 381 | 212 | 9 | 177 | 556 | 104 | 409 | 3.97e-16 | 82.4 |
| Msa0957040 | MtrunA17_Chr2g0285191 | 55.556 | 72 | 31 | 1 | 485 | 556 | 381 | 451 | 5.10e-16 | 82.0 |
| Msa0957040 | MtrunA17_Chr2g0285191 | 23.282 | 524 | 290 | 18 | 50 | 555 | 676 | 1105 | 4.52e-14 | 75.9 |
| Msa0957040 | MtrunA17_Chr3g0123411 | 26.582 | 395 | 200 | 11 | 171 | 556 | 645 | 958 | 5.62e-16 | 81.6 |
| Msa0957040 | MtrunA17_Chr6g0481921 | 62.500 | 56 | 21 | 0 | 501 | 556 | 269 | 324 | 3.41e-15 | 79.3 |
| Msa0957040 | MtrunA17_Chr6g0481921 | 23.954 | 526 | 274 | 22 | 57 | 556 | 555 | 980 | 1.27e-11 | 67.8 |
| Msa0957040 | MtrunA17_Chr4g0069411 | 25.455 | 385 | 209 | 12 | 174 | 556 | 141 | 449 | 1.00e-14 | 77.8 |
| Msa0957040 | MtrunA17_Chr6g0453051 | 23.760 | 383 | 212 | 10 | 177 | 556 | 111 | 416 | 1.17e-14 | 77.4 |
| Msa0957040 | MtrunA17_Chr6g0452071 | 27.273 | 297 | 167 | 8 | 265 | 556 | 14 | 266 | 2.21e-14 | 75.5 |
| Msa0957040 | MtrunA17_Chr6g0452111 | 24.031 | 387 | 207 | 8 | 177 | 556 | 765 | 1071 | 3.20e-13 | 72.8 |
| Msa0957040 | MtrunA17_Chr6g0451881 | 24.227 | 388 | 206 | 11 | 177 | 556 | 753 | 1060 | 3.30e-13 | 72.8 |
| Msa0957040 | MtrunA17_Chr6g0452061 | 27.372 | 274 | 153 | 6 | 287 | 556 | 351 | 582 | 3.95e-13 | 72.4 |
| Msa0957040 | MtrunA17_Chr1g0194031 | 57.143 | 56 | 24 | 0 | 501 | 556 | 382 | 437 | 4.18e-13 | 72.4 |
| Msa0957040 | MtrunA17_Chr4g0069351 | 60.714 | 56 | 22 | 0 | 501 | 556 | 376 | 431 | 4.76e-13 | 72.4 |
| Msa0957040 | MtrunA17_Chr4g0069361 | 58.929 | 56 | 23 | 0 | 501 | 556 | 376 | 431 | 1.50e-12 | 70.9 |
| Msa0957040 | MtrunA17_Chr1g0193991 | 53.571 | 56 | 26 | 0 | 501 | 556 | 387 | 442 | 2.50e-12 | 70.1 |
| Msa0957040 | MtrunA17_Chr1g0193991 | 51.786 | 56 | 27 | 0 | 501 | 556 | 1042 | 1097 | 1.83e-11 | 67.4 |
| Msa0957040 | MtrunA17_Chr7g0233901 | 53.571 | 56 | 26 | 0 | 501 | 556 | 993 | 1048 | 2.99e-12 | 69.7 |
| Msa0957040 | MtrunA17_Chr1g0156821 | 50.000 | 56 | 28 | 0 | 501 | 556 | 992 | 1047 | 4.25e-12 | 69.3 |
| Msa0957040 | MtrunA17_Chr4g0069401 | 57.143 | 56 | 24 | 0 | 501 | 556 | 371 | 426 | 4.63e-12 | 69.3 |
| Msa0957040 | MtrunA17_Chr4g0039821 | 57.143 | 56 | 24 | 0 | 501 | 556 | 374 | 429 | 5.51e-12 | 68.9 |
| Msa0957040 | MtrunA17_Chr6g0452141 | 24.165 | 389 | 203 | 11 | 177 | 556 | 110 | 415 | 5.74e-12 | 68.9 |
| Msa0957040 | MtrunA17_Chr1g0194001 | 51.786 | 56 | 27 | 0 | 501 | 556 | 145 | 200 | 1.28e-11 | 66.6 |
| Msa0957040 | MtrunA17_Chr7g0264631 | 50.000 | 56 | 28 | 0 | 501 | 556 | 1079 | 1134 | 1.46e-11 | 67.8 |
| Msa0957040 | MtrunA17_Chr4g0041871 | 50.000 | 56 | 28 | 0 | 501 | 556 | 1004 | 1059 | 2.45e-11 | 67.0 |
| Msa0957040 | MtrunA17_Chr3g0119381 | 53.571 | 56 | 26 | 0 | 501 | 556 | 397 | 452 | 2.51e-11 | 67.0 |
| Msa0957040 | MtrunA17_Chr3g0128391 | 21.818 | 385 | 216 | 12 | 177 | 556 | 5 | 309 | 3.62e-11 | 65.9 |
| Msa0957040 | MtrunA17_Chr3g0138211 | 41.975 | 81 | 42 | 1 | 476 | 556 | 374 | 449 | 6.58e-11 | 65.5 |
| Msa0957040 | MtrunA17_Chr6g0451911 | 22.597 | 385 | 214 | 10 | 177 | 556 | 109 | 414 | 9.42e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0957040 | AT4G25450.1 | 63.800 | 500 | 147 | 3 | 57 | 556 | 58 | 523 | 0.0 | 664 |
| Msa0957040 | AT4G25450.2 | 63.800 | 500 | 147 | 3 | 57 | 556 | 58 | 523 | 0.0 | 662 |
| Msa0957040 | AT4G25450.3 | 65.714 | 385 | 101 | 1 | 172 | 556 | 1 | 354 | 0.0 | 530 |
| Msa0957040 | AT5G46540.1 | 24.190 | 463 | 268 | 12 | 102 | 556 | 23 | 410 | 4.83e-19 | 92.0 |
| Msa0957040 | AT5G46540.1 | 29.114 | 237 | 126 | 8 | 320 | 556 | 864 | 1058 | 1.60e-13 | 74.3 |
| Msa0957040 | AT4G01830.1 | 25.000 | 384 | 212 | 10 | 174 | 556 | 98 | 406 | 1.54e-18 | 90.5 |
| Msa0957040 | AT3G62150.3 | 25.260 | 384 | 211 | 12 | 174 | 556 | 148 | 456 | 8.91e-17 | 84.7 |
| Msa0957040 | AT3G62150.3 | 53.571 | 56 | 26 | 0 | 501 | 556 | 1050 | 1105 | 2.55e-11 | 67.4 |
| Msa0957040 | AT3G62150.2 | 25.260 | 384 | 211 | 12 | 174 | 556 | 148 | 456 | 8.91e-17 | 84.7 |
| Msa0957040 | AT3G62150.2 | 53.571 | 56 | 26 | 0 | 501 | 556 | 1050 | 1105 | 2.55e-11 | 67.4 |
| Msa0957040 | AT3G62150.1 | 25.260 | 384 | 211 | 12 | 174 | 556 | 148 | 456 | 8.91e-17 | 84.7 |
| Msa0957040 | AT3G62150.1 | 53.571 | 56 | 26 | 0 | 501 | 556 | 1050 | 1105 | 2.55e-11 | 67.4 |
| Msa0957040 | AT5G39040.2 | 24.219 | 384 | 215 | 5 | 173 | 556 | 142 | 449 | 7.37e-16 | 80.9 |
| Msa0957040 | AT4G25960.1 | 23.560 | 382 | 214 | 11 | 177 | 556 | 149 | 454 | 1.77e-15 | 80.5 |
| Msa0957040 | AT5G39040.1 | 24.495 | 396 | 199 | 9 | 173 | 556 | 142 | 449 | 8.21e-15 | 78.2 |
| Msa0957040 | AT1G10680.2 | 23.622 | 381 | 211 | 11 | 177 | 556 | 113 | 414 | 5.42e-14 | 75.9 |
| Msa0957040 | AT2G47000.4 | 58.929 | 56 | 23 | 0 | 501 | 556 | 382 | 437 | 5.55e-14 | 75.9 |
| Msa0957040 | AT1G10680.1 | 23.622 | 381 | 211 | 11 | 177 | 556 | 113 | 414 | 5.83e-14 | 75.9 |
| Msa0957040 | AT2G47000.2 | 58.929 | 56 | 23 | 0 | 501 | 556 | 382 | 437 | 5.96e-14 | 75.9 |
| Msa0957040 | AT2G47000.2 | 55.357 | 56 | 25 | 0 | 501 | 556 | 1040 | 1095 | 1.02e-11 | 68.6 |
| Msa0957040 | AT2G47000.3 | 58.929 | 56 | 23 | 0 | 501 | 556 | 382 | 437 | 6.33e-14 | 75.5 |
| Msa0957040 | AT2G47000.7 | 58.929 | 56 | 23 | 0 | 501 | 556 | 382 | 437 | 6.33e-14 | 75.5 |
| Msa0957040 | AT2G47000.6 | 58.929 | 56 | 23 | 0 | 501 | 556 | 382 | 437 | 6.62e-14 | 75.5 |
| Msa0957040 | AT2G47000.6 | 55.357 | 56 | 25 | 0 | 501 | 556 | 1040 | 1095 | 1.09e-11 | 68.6 |
| Msa0957040 | AT2G47000.5 | 58.929 | 56 | 23 | 0 | 501 | 556 | 382 | 437 | 6.62e-14 | 75.5 |
| Msa0957040 | AT2G47000.5 | 55.357 | 56 | 25 | 0 | 501 | 556 | 1040 | 1095 | 1.09e-11 | 68.6 |
| Msa0957040 | AT2G47000.1 | 58.929 | 56 | 23 | 0 | 501 | 556 | 382 | 437 | 6.62e-14 | 75.5 |
| Msa0957040 | AT2G47000.1 | 55.357 | 56 | 25 | 0 | 501 | 556 | 1040 | 1095 | 1.09e-11 | 68.6 |
| Msa0957040 | AT1G02530.1 | 57.143 | 56 | 24 | 0 | 501 | 556 | 366 | 421 | 1.74e-13 | 74.3 |
| Msa0957040 | AT1G02530.2 | 57.143 | 56 | 24 | 0 | 501 | 556 | 366 | 421 | 1.78e-13 | 73.9 |
| Msa0957040 | AT4G18050.1 | 57.143 | 56 | 24 | 0 | 501 | 556 | 353 | 408 | 1.84e-13 | 74.3 |
| Msa0957040 | AT1G02520.1 | 57.143 | 56 | 24 | 0 | 501 | 556 | 379 | 434 | 1.88e-13 | 74.3 |
| Msa0957040 | AT1G02520.1 | 26.667 | 285 | 165 | 7 | 273 | 556 | 844 | 1085 | 1.34e-12 | 71.2 |
| Msa0957040 | AT1G02520.2 | 57.143 | 56 | 24 | 0 | 501 | 556 | 379 | 434 | 1.88e-13 | 74.3 |
| Msa0957040 | AT1G02520.2 | 26.667 | 285 | 165 | 7 | 273 | 556 | 844 | 1085 | 1.34e-12 | 71.2 |
| Msa0957040 | AT1G02520.3 | 57.143 | 56 | 24 | 0 | 501 | 556 | 379 | 434 | 1.88e-13 | 74.3 |
| Msa0957040 | AT1G02520.3 | 26.667 | 285 | 165 | 7 | 273 | 556 | 844 | 1085 | 1.34e-12 | 71.2 |
| Msa0957040 | AT4G18050.2 | 57.143 | 56 | 24 | 0 | 501 | 556 | 363 | 418 | 1.88e-13 | 73.9 |
| Msa0957040 | AT4G01830.2 | 55.357 | 56 | 25 | 0 | 501 | 556 | 117 | 172 | 4.34e-12 | 69.7 |
| Msa0957040 | AT2G36910.1 | 50.000 | 56 | 28 | 0 | 501 | 556 | 1022 | 1077 | 3.62e-11 | 66.6 |
Find 107 sgRNAs with CRISPR-Local
Find 397 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTATTTCTCTTATCCTTTA+AGG | 0.063689 | 6_3:+66735890 | Msa0957040:CDS |
| ATTTCCACATCTGGCCTTAA+AGG | 0.132488 | 6_3:-66735904 | None:intergenic |
| TCTCACTGACAAGATCTTTA+AGG | 0.151624 | 6_3:-66733287 | None:intergenic |
| TGTAATGCAAATGATTATTT+TGG | 0.187346 | 6_3:-66735148 | None:intergenic |
| CAAGGATTGGTTAATACTTT+TGG | 0.205837 | 6_3:+66734960 | Msa0957040:CDS |
| CCCTCAACTGGCTCCAATTC+TGG | 0.227623 | 6_3:+66733643 | Msa0957040:CDS |
| GGATGTCATTGGGAGGATTT+AGG | 0.251255 | 6_3:-66729201 | None:intergenic |
| GTGGAGTCTTCTCAGTAAAA+TGG | 0.253630 | 6_3:+66732666 | Msa0957040:CDS |
| TTTCAAGGGATCGCGGATTC+AGG | 0.254993 | 6_3:+66733313 | Msa0957040:CDS |
| TTATAAACATGAACATAGTA+TGG | 0.285001 | 6_3:+66732731 | Msa0957040:CDS |
| TGGTTTGTTAACATCGGATT+TGG | 0.287433 | 6_3:+66733260 | Msa0957040:CDS |
| GGATCCAGTTCAGCTACATT+AGG | 0.297279 | 6_3:-66729428 | None:intergenic |
| CGTGATAATGATAGTGCTTT+TGG | 0.309991 | 6_3:-66729344 | None:intergenic |
| AAGAAGAATGAAATGAGGTT+TGG | 0.317701 | 6_3:-66729168 | None:intergenic |
| AGTGTTGTTGGGGATGTCAT+TGG | 0.322225 | 6_3:-66729212 | None:intergenic |
| TACAAATTATTCTTCTCTAA+TGG | 0.322640 | 6_3:+66735110 | Msa0957040:CDS |
| TTGAATTGTAATGGATGAAT+AGG | 0.323435 | 6_3:-66729314 | None:intergenic |
| ACACTAAGAGCTCAGATCTT+TGG | 0.331230 | 6_3:+66732769 | Msa0957040:CDS |
| AGCTCCCATGTTACAACTTT+CGG | 0.339870 | 6_3:-66729488 | None:intergenic |
| ATGATGAATCATGTCGTCTA+AGG | 0.352972 | 6_3:-66729086 | None:intergenic |
| TGTTGCAACCCATCAACTTT+CGG | 0.353348 | 6_3:-66729449 | None:intergenic |
| CTCACTGACAAGATCTTTAA+GGG | 0.362393 | 6_3:-66733286 | None:intergenic |
| TAGAAATTTACCGATTGAAA+TGG | 0.362538 | 6_3:-66733687 | None:intergenic |
| AGATAAGGAGAGATGGTAAT+GGG | 0.364098 | 6_3:-66729237 | None:intergenic |
| GTGTTGTTGGGGATGTCATT+GGG | 0.378842 | 6_3:-66729211 | None:intergenic |
| GTGTTTAGTTTAGCTTGGTC+TGG | 0.380882 | 6_3:+66735197 | Msa0957040:CDS |
| AGAAGAATGAAATGAGGTTT+GGG | 0.381826 | 6_3:-66729167 | None:intergenic |
| ATCATCAGAACAGCCAGAAT+TGG | 0.384955 | 6_3:-66733656 | None:intergenic |
| TCTGGAGATATTTGTCTTGA+AGG | 0.386734 | 6_3:+66735215 | Msa0957040:CDS |
| ATGAAATAGAGTTGAAAAGT+TGG | 0.388107 | 6_3:-66729127 | None:intergenic |
| CGACCCTAATGTAGCTGAAC+TGG | 0.388174 | 6_3:+66729424 | Msa0957040:CDS |
| AATGGCTATGTTTGCTAAGC+AGG | 0.391017 | 6_3:+66734450 | Msa0957040:CDS |
| AGAAGACTCCACAACGGTTC+GGG | 0.397102 | 6_3:-66732655 | None:intergenic |
| AGTTGTAACATGGGAGCTGC+TGG | 0.403756 | 6_3:+66729493 | Msa0957040:CDS |
| CTTGTATTTCTGTAGGTCAC+TGG | 0.405316 | 6_3:+66733593 | Msa0957040:intron |
| GGTTTGTTAACATCGGATTT+GGG | 0.406308 | 6_3:+66733261 | Msa0957040:CDS |
| CCACTTAAAATTTCCACATC+TGG | 0.411326 | 6_3:-66735913 | None:intergenic |
| GCTTAGCAAACATAGCCATT+TGG | 0.413427 | 6_3:-66734447 | None:intergenic |
| GATCCAGTTCAGCTACATTA+GGG | 0.415067 | 6_3:-66729427 | None:intergenic |
| TTACAGGTTCGATCCTTTAG+TGG | 0.428452 | 6_3:+66734415 | Msa0957040:intron |
| TATTATGTCCTTCAGGTTCA+AGG | 0.440853 | 6_3:+66734942 | Msa0957040:intron |
| GAGAAGACTCCACAACGGTT+CGG | 0.446211 | 6_3:-66732656 | None:intergenic |
| TGGTAATGGGAGAGTGTTGT+TGG | 0.448136 | 6_3:-66729224 | None:intergenic |
| AAGATAAGGAGAGATGGTAA+TGG | 0.449892 | 6_3:-66729238 | None:intergenic |
| ACAATCAGATATAGATGCTT+GGG | 0.450143 | 6_3:-66734279 | None:intergenic |
| GAACTGGATCCGAAAGTTGA+TGG | 0.450162 | 6_3:+66729440 | Msa0957040:CDS |
| TGGAGTCTTCTCAGTAAAAT+GGG | 0.450623 | 6_3:+66732667 | Msa0957040:CDS |
| GGTTTGCATTTGAATTGTAA+TGG | 0.454148 | 6_3:-66729323 | None:intergenic |
| TGTCCTTCAGGTTCAAGGAT+TGG | 0.468935 | 6_3:+66734947 | Msa0957040:intron |
| CCAGAATTGGAGCCAGTTGA+GGG | 0.469021 | 6_3:-66733643 | None:intergenic |
| CAATCGAGCGGTATAAAGCT+TGG | 0.471477 | 6_3:+66734570 | Msa0957040:CDS |
| TACAATCAGATATAGATGCT+TGG | 0.473851 | 6_3:-66734280 | None:intergenic |
| CTGCCACGTGCTTACATCAC+TGG | 0.474881 | 6_3:+66729392 | Msa0957040:CDS |
| CTGGTTGGTGCTAGTGGTGC+GGG | 0.475334 | 6_3:+66735973 | Msa0957040:CDS |
| CAAGCTTTATACCGCTCGAT+TGG | 0.475719 | 6_3:-66734569 | None:intergenic |
| GGTAATGGGAGAGTGTTGTT+GGG | 0.484798 | 6_3:-66729223 | None:intergenic |
| ATTGCAGTTTCCATTTCAAT+CGG | 0.491259 | 6_3:+66733677 | Msa0957040:CDS |
| GCAATGTGTTTAGTTTAGCT+TGG | 0.492058 | 6_3:+66735192 | Msa0957040:CDS |
| AGCTACATTAGGGTCGGACG+CGG | 0.507554 | 6_3:-66729417 | None:intergenic |
| CTCTTTCTAAGCCGTAGGCA+AGG | 0.511162 | 6_3:-66735055 | None:intergenic |
| TTAACTGCACTATATTGTCT+CGG | 0.520503 | 6_3:+66734645 | Msa0957040:CDS |
| TTCAAGGGATCGCGGATTCA+GGG | 0.522604 | 6_3:+66733314 | Msa0957040:CDS |
| ACTGCACTGGTTGGTGCTAG+TGG | 0.529730 | 6_3:+66735967 | Msa0957040:CDS |
| TCTCAGGGTCAACTCTCTGT+TGG | 0.533053 | 6_3:+66734808 | Msa0957040:intron |
| TCTCGGAGGAAGCAAAGTTA+AGG | 0.535920 | 6_3:+66734662 | Msa0957040:CDS |
| TAGTGGAGAAAAGCGCCAAA+TGG | 0.539530 | 6_3:+66734432 | Msa0957040:CDS |
| TGAAGGAAGATAAGGAGAGA+TGG | 0.544549 | 6_3:-66729244 | None:intergenic |
| TTGTCAGTGAGAATGTTTCA+AGG | 0.544574 | 6_3:+66733298 | Msa0957040:CDS |
| TTGTTGGGGATGTCATTGGG+AGG | 0.545994 | 6_3:-66729208 | None:intergenic |
| AATTGAAGAAGAATGAAATG+AGG | 0.546435 | 6_3:-66729173 | None:intergenic |
| GCCAGAATTGGAGCCAGTTG+AGG | 0.548446 | 6_3:-66733644 | None:intergenic |
| CAGTTCTCTTTCTAAGCCGT+AGG | 0.558795 | 6_3:-66735060 | None:intergenic |
| TTGTAGGTAGGGGAAATCAC+TGG | 0.559705 | 6_3:+66733240 | Msa0957040:intron |
| GAAAATATTCATGATTCATG+AGG | 0.563056 | 6_3:-66729064 | None:intergenic |
| ATGTGGAACTGTAACTGCAC+TGG | 0.563351 | 6_3:+66735954 | Msa0957040:CDS |
| GTTGACGATGCCCTTGCCTA+CGG | 0.563596 | 6_3:+66735044 | Msa0957040:CDS |
| TCAACTCTCTGTTGGAACAA+TGG | 0.564542 | 6_3:+66734816 | Msa0957040:CDS |
| AAAATATTCATGATTCATGA+GGG | 0.567368 | 6_3:-66729063 | None:intergenic |
| AAATAGAGTTGAAAAGTTGG+AGG | 0.567941 | 6_3:-66729124 | None:intergenic |
| ACTGGTTGGTGCTAGTGGTG+CGG | 0.569060 | 6_3:+66735972 | Msa0957040:CDS |
| TCTTTCTAAGCCGTAGGCAA+GGG | 0.570044 | 6_3:-66735054 | None:intergenic |
| GTGTCAGACCCGAACCGTTG+TGG | 0.572804 | 6_3:+66732647 | Msa0957040:CDS |
| AATCACTGGTTTGTTAACAT+CGG | 0.574300 | 6_3:+66733254 | Msa0957040:CDS |
| ACCTGAGTGACAATAAAAGA+AGG | 0.574919 | 6_3:-66733509 | None:intergenic |
| GTTGTAACATGGGAGCTGCT+GGG | 0.576302 | 6_3:+66729494 | Msa0957040:CDS |
| TGGGTTGCAACAAGAGGAAG+CGG | 0.582432 | 6_3:+66729460 | Msa0957040:CDS |
| TTATCCTTTAAGGCCAGATG+TGG | 0.582996 | 6_3:+66735900 | Msa0957040:CDS |
| TGTCAGTGAGAATGTTTCAA+GGG | 0.591568 | 6_3:+66733299 | Msa0957040:CDS |
| GTAATGGGAGAGTGTTGTTG+GGG | 0.591818 | 6_3:-66729222 | None:intergenic |
| CGGATTCAGGGCATTATCTG+AGG | 0.595269 | 6_3:+66733326 | Msa0957040:CDS |
| AACTGGATCCGAAAGTTGAT+GGG | 0.595790 | 6_3:+66729441 | Msa0957040:CDS |
| ATAAACAGCAACTCTAGTCA+AGG | 0.599555 | 6_3:-66734616 | None:intergenic |
| TATAAACATGAACATAGTAT+GGG | 0.602971 | 6_3:+66732732 | Msa0957040:CDS |
| CAGTTCAGCTACATTAGGGT+CGG | 0.630671 | 6_3:-66729423 | None:intergenic |
| AGTTGATGGGTTGCAACAAG+AGG | 0.631771 | 6_3:+66729454 | Msa0957040:CDS |
| GGAACTCACTGTTCTAATAG+CGG | 0.638638 | 6_3:-66734318 | None:intergenic |
| TTATACCGAAAGTTGTAACA+TGG | 0.639693 | 6_3:+66729483 | Msa0957040:CDS |
| GTTCTATCTTTCCAATCGAG+CGG | 0.642969 | 6_3:+66734558 | Msa0957040:CDS |
| GAGAATGTTTCAAGGGATCG+CGG | 0.643905 | 6_3:+66733306 | Msa0957040:CDS |
| TTAAATTTAAGACTAAAATG+TGG | 0.655006 | 6_3:+66735937 | Msa0957040:CDS |
| GGAACTGTAACTGCACTGGT+TGG | 0.662335 | 6_3:+66735958 | Msa0957040:CDS |
| TATACCGAAAGTTGTAACAT+GGG | 0.666309 | 6_3:+66729484 | Msa0957040:CDS |
| CAGAATTGGAGCCAGTTGAG+GGG | 0.676319 | 6_3:-66733642 | None:intergenic |
| CGGAGGAAGCAAAGTTAAGG+CGG | 0.684012 | 6_3:+66734665 | Msa0957040:CDS |
| ACTGCACTATATTGTCTCGG+AGG | 0.702324 | 6_3:+66734648 | Msa0957040:CDS |
| GGTCCAGTGATGTAAGCACG+TGG | 0.724600 | 6_3:-66729395 | None:intergenic |
| TTACTGAGAAGACTCCACAA+CGG | 0.766511 | 6_3:-66732661 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTTTTAATATATT+GGG | - | chr6_3:66732151-66732170 | None:intergenic | 0.0% |
| !! | ATAAATTAACATATATGTAA+CGG | - | chr6_3:66730236-66730255 | None:intergenic | 10.0% |
| !! | TATGTTAATTTATTTAAAGA+CGG | + | chr6_3:66730243-66730262 | Msa0957040:intron | 10.0% |
| !! | TAAAGAAAAAACAATTATTT+AGG | + | chr6_3:66730554-66730573 | Msa0957040:intron | 10.0% |
| !! | TATAAATATCATAATACATA+TGG | - | chr6_3:66731398-66731417 | None:intergenic | 10.0% |
| !! | AAATATTTGTAATAATCTAA+TGG | + | chr6_3:66731490-66731509 | Msa0957040:intron | 10.0% |
| !! | TGACAATATATTAAAAAATT+TGG | - | chr6_3:66731573-66731592 | None:intergenic | 10.0% |
| !! | TTAAAATTAAAATACACTAA+CGG | - | chr6_3:66732574-66732593 | None:intergenic | 10.0% |
| !! | AATAAAATACTATAAAGAAA+AGG | - | chr6_3:66733179-66733198 | None:intergenic | 10.0% |
| !!! | TTTTCTTTATAGTATTTTAT+TGG | + | chr6_3:66733178-66733197 | Msa0957040:intron | 10.0% |
| !!! | TCTCAAAATTTTAATTATAT+AGG | + | chr6_3:66735708-66735727 | Msa0957040:intron | 10.0% |
| !!! | TTTTGTTTAAGCATAAATTT+CGG | + | chr6_3:66729522-66729541 | Msa0957040:CDS | 15.0% |
| !!! | TTTTAATACATAGACTATTA+TGG | - | chr6_3:66729847-66729866 | None:intergenic | 15.0% |
| !!! | AATTGTTTTAGATATTTATC+TGG | + | chr6_3:66730499-66730518 | Msa0957040:intron | 15.0% |
| !!! | ATTGTTTTAGATATTTATCT+GGG | + | chr6_3:66730500-66730519 | Msa0957040:intron | 15.0% |
| !! | TTGTATGAGATAAATTTATA+TGG | + | chr6_3:66730703-66730722 | Msa0957040:intron | 15.0% |
| !!! | TATGGTTGAAATTTTTTAAA+CGG | + | chr6_3:66730721-66730740 | Msa0957040:intron | 15.0% |
| !! | CATTATGAATATTCAAAAAA+AGG | + | chr6_3:66730834-66730853 | Msa0957040:intron | 15.0% |
| !! | TTAACAATTTACTATCAATT+TGG | - | chr6_3:66730945-66730964 | None:intergenic | 15.0% |
| !!! | AATTGATAGTAAATTGTTAA+AGG | + | chr6_3:66730945-66730964 | Msa0957040:intron | 15.0% |
| !!! | ATTGATAGTAAATTGTTAAA+GGG | + | chr6_3:66730946-66730965 | Msa0957040:intron | 15.0% |
| !! | TTATAAAGATAAAGAAATGA+TGG | - | chr6_3:66731453-66731472 | None:intergenic | 15.0% |
| !! | TAATATATTGTCAATGTAAA+AGG | + | chr6_3:66731580-66731599 | Msa0957040:intron | 15.0% |
| !!! | GTTAAATTCATATATGTTTT+TGG | - | chr6_3:66731727-66731746 | None:intergenic | 15.0% |
| !! | TAAATTACTGAGATTTATTT+AGG | + | chr6_3:66732411-66732430 | Msa0957040:intron | 15.0% |
| !! | AAATTACTGAGATTTATTTA+GGG | + | chr6_3:66732412-66732431 | Msa0957040:intron | 15.0% |
| !!! | GTTAGTGTATTTTAATTTTA+AGG | + | chr6_3:66732573-66732592 | Msa0957040:intron | 15.0% |
| !! | AATAACTAATAAAAATGAAC+AGG | - | chr6_3:66732839-66732858 | None:intergenic | 15.0% |
| !! | TCAATAGGTAAATTAAAATA+TGG | - | chr6_3:66733544-66733563 | None:intergenic | 15.0% |
| !!! | TATTTTAATTTACCTATTGA+TGG | + | chr6_3:66733544-66733563 | Msa0957040:intron | 15.0% |
| !! | TATAAAATGTTGTCAAATTT+CGG | + | chr6_3:66733884-66733903 | Msa0957040:intron | 15.0% |
| !! | AAAATAAAAATCAATCAACA+AGG | - | chr6_3:66734190-66734209 | None:intergenic | 15.0% |
| !! | AAAATTAATCCATTTAGTTA+TGG | - | chr6_3:66735571-66735590 | None:intergenic | 15.0% |
| !!! | AAAATTAATTTTATGCTTGT+CGG | + | chr6_3:66735668-66735687 | Msa0957040:intron | 15.0% |
| !!! | TTAAATTTAAGACTAAAATG+TGG | + | chr6_3:66735937-66735956 | Msa0957040:CDS | 15.0% |
| !!! | TGTTTGTTTATGAATTTTGA+AGG | - | chr6_3:66729264-66729283 | None:intergenic | 20.0% |
| !! | AAAAAGTTACCAGAAAAAAT+GGG | - | chr6_3:66729602-66729621 | None:intergenic | 20.0% |
| !! | AAAAAAGTTACCAGAAAAAA+TGG | - | chr6_3:66729603-66729622 | None:intergenic | 20.0% |
| !!! | AATTGATTTAACAGTAAGTA+AGG | - | chr6_3:66729994-66730013 | None:intergenic | 20.0% |
| !! | AGTAAAATTTGACAGATTTA+AGG | - | chr6_3:66730861-66730880 | None:intergenic | 20.0% |
| !! | CAAATGTAGAAATAATGTAT+TGG | - | chr6_3:66731089-66731108 | None:intergenic | 20.0% |
| !!! | CAATACATTATTTCTACATT+TGG | + | chr6_3:66731087-66731106 | Msa0957040:intron | 20.0% |
| !!! | ATTTTCCGTTGTTAAAATAT+AGG | + | chr6_3:66731144-66731163 | Msa0957040:intron | 20.0% |
| !! | TAAAATGTCAAATAGGAATT+TGG | - | chr6_3:66731172-66731191 | None:intergenic | 20.0% |
| !! | ACTCTATTAAAATGTCAAAT+AGG | - | chr6_3:66731179-66731198 | None:intergenic | 20.0% |
| !!! | AAATGTTTCTATTGTTCTAA+CGG | + | chr6_3:66731673-66731692 | Msa0957040:intron | 20.0% |
| !! | AATTACTGAGATTTATTTAG+GGG | + | chr6_3:66732413-66732432 | Msa0957040:intron | 20.0% |
| !! | TTATAAACATGAACATAGTA+TGG | + | chr6_3:66732731-66732750 | Msa0957040:CDS | 20.0% |
| !! | TATAAACATGAACATAGTAT+GGG | + | chr6_3:66732732-66732751 | Msa0957040:CDS | 20.0% |
| !! | AGTTATTTATTACAATGTCT+CGG | + | chr6_3:66732852-66732871 | Msa0957040:intron | 20.0% |
| !!! | TGAATTTTTTGACAAATACA+AGG | + | chr6_3:66732913-66732932 | Msa0957040:CDS | 20.0% |
| !!! | TTTATTTATCTTTAGGATAC+TGG | - | chr6_3:66733111-66733130 | None:intergenic | 20.0% |
| !!! | TTATAGTATTTTATTGGAGT+TGG | + | chr6_3:66733184-66733203 | Msa0957040:intron | 20.0% |
| !! | TCATCGTATTATGAATAAAT+AGG | - | chr6_3:66734342-66734361 | None:intergenic | 20.0% |
| !!! | AGATACTTAAATGTTGATTA+TGG | + | chr6_3:66734524-66734543 | Msa0957040:intron | 20.0% |
| !!! | GATACTTAAATGTTGATTAT+GGG | + | chr6_3:66734525-66734544 | Msa0957040:intron | 20.0% |
| !! | TACAAATTATTCTTCTCTAA+TGG | + | chr6_3:66735110-66735129 | Msa0957040:CDS | 20.0% |
| !!! | TGTAATGCAAATGATTATTT+TGG | - | chr6_3:66735151-66735170 | None:intergenic | 20.0% |
| !!! | TAAATGGATTAATTTTCTTG+TGG | + | chr6_3:66735575-66735594 | Msa0957040:intron | 20.0% |
| !!! | AAATGGATTAATTTTCTTGT+GGG | + | chr6_3:66735576-66735595 | Msa0957040:intron | 20.0% |
| !!! | AAATTAATTTTGAGCTATAG+CGG | - | chr6_3:66735659-66735678 | None:intergenic | 20.0% |
| ! | ATGAAATAGAGTTGAAAAGT+TGG | - | chr6_3:66729130-66729149 | None:intergenic | 25.0% |
| ! | AATTGAAGAAGAATGAAATG+AGG | - | chr6_3:66729176-66729195 | None:intergenic | 25.0% |
| !!! | ATGAATTTTGAAGGAAGATA+AGG | - | chr6_3:66729255-66729274 | None:intergenic | 25.0% |
| !!! | TTGAATTGTAATGGATGAAT+AGG | - | chr6_3:66729317-66729336 | None:intergenic | 25.0% |
| ! | TCTTAGATAAATAGAAGGAA+TGG | - | chr6_3:66729688-66729707 | None:intergenic | 25.0% |
| !!! | GTTAGTCTTAGATAAATAGA+AGG | - | chr6_3:66729693-66729712 | None:intergenic | 25.0% |
| ! | GGTATATTCAATTAATTGTC+AGG | + | chr6_3:66729798-66729817 | Msa0957040:intron | 25.0% |
| !!! | AGGTTAATAGTTATTTTCGT+CGG | + | chr6_3:66729818-66729837 | Msa0957040:intron | 25.0% |
| ! | TAACCAACATAATCTACAAT+CGG | - | chr6_3:66729884-66729903 | None:intergenic | 25.0% |
| !!! | TCCTATATTTTTTACATCAG+CGG | - | chr6_3:66730205-66730224 | None:intergenic | 25.0% |
| ! | GACAGTAGATGAATTAATAA+AGG | - | chr6_3:66730363-66730382 | None:intergenic | 25.0% |
| ! | TGAGAAATGTTGATCAATTA+TGG | - | chr6_3:66730428-66730447 | None:intergenic | 25.0% |
| ! | ATATGTAACTCTTGTATCTA+TGG | + | chr6_3:66730452-66730471 | Msa0957040:intron | 25.0% |
| !! | AAAACAATTATTTAGGACAC+CGG | + | chr6_3:66730561-66730580 | Msa0957040:intron | 25.0% |
| ! | TTTCTTAACATATGCTCTAA+GGG | - | chr6_3:66730987-66731006 | None:intergenic | 25.0% |
| ! | ATTTCTTAACATATGCTCTA+AGG | - | chr6_3:66730988-66731007 | None:intergenic | 25.0% |
| ! | AATTGAATGCACAAAGTTTA+AGG | - | chr6_3:66731029-66731048 | None:intergenic | 25.0% |
| !!! | TGGATCCTATATTTTAACAA+CGG | - | chr6_3:66731152-66731171 | None:intergenic | 25.0% |
| !! | TTTAAAATGTTCAGAATCTC+AGG | + | chr6_3:66731209-66731228 | Msa0957040:intron | 25.0% |
| ! | GCATACTATAATGTAACAAT+TGG | - | chr6_3:66731300-66731319 | None:intergenic | 25.0% |
| ! | ACATTATAGTATGCAATTTC+AGG | + | chr6_3:66731306-66731325 | Msa0957040:intron | 25.0% |
| ! | CATTATAGTATGCAATTTCA+GGG | + | chr6_3:66731307-66731326 | Msa0957040:intron | 25.0% |
| ! | TAATGGTTATGATTGATTGA+CGG | + | chr6_3:66731507-66731526 | Msa0957040:intron | 25.0% |
| !!! | TATATGTTTTTGGTGTAAAG+AGG | - | chr6_3:66731717-66731736 | None:intergenic | 25.0% |
| ! | TGAATTTAACCAAGTAATTC+TGG | + | chr6_3:66731737-66731756 | Msa0957040:intron | 25.0% |
| ! | TGACAACTTAAATTTCTGAA+AGG | - | chr6_3:66731931-66731950 | None:intergenic | 25.0% |
| ! | TATATATAGGTAAGTTGCTT+AGG | + | chr6_3:66732098-66732117 | Msa0957040:intron | 25.0% |
| !!! | GCTACAATAAGTGTTTTTTT+AGG | + | chr6_3:66732347-66732366 | Msa0957040:intron | 25.0% |
| !!! | TAGAGATTTTTTCTAACTCT+TGG | - | chr6_3:66732393-66732412 | None:intergenic | 25.0% |
| !! | TAATCATCAAAACTCTGAAA+GGG | - | chr6_3:66732541-66732560 | None:intergenic | 25.0% |
| ! | TTAATCATCAAAACTCTGAA+AGG | - | chr6_3:66732542-66732561 | None:intergenic | 25.0% |
| ! | TATCATGTTGTTGTATTCTT+AGG | + | chr6_3:66732601-66732620 | Msa0957040:intron | 25.0% |
| ! | ACAAAAATAACAGTGAAAAG+TGG | - | chr6_3:66732712-66732731 | None:intergenic | 25.0% |
| !!! | TGGAAAAATATTGATTCAGA+AGG | + | chr6_3:66732789-66732808 | Msa0957040:CDS | 25.0% |
| ! | TCAAGAGATTAACAAACATA+GGG | - | chr6_3:66732979-66732998 | None:intergenic | 25.0% |
| ! | ATCAAGAGATTAACAAACAT+AGG | - | chr6_3:66732980-66732999 | None:intergenic | 25.0% |
| ! | AAAACTTATTGCAGTTACTT+TGG | + | chr6_3:66733210-66733229 | Msa0957040:intron | 25.0% |
| !! | TTACTTTGGTTTATTCTTGT+AGG | + | chr6_3:66733224-66733243 | Msa0957040:intron | 25.0% |
| ! | AATTAAACATGACCATCAAT+AGG | - | chr6_3:66733559-66733578 | None:intergenic | 25.0% |
| !! | TAGAAATTTACCGATTGAAA+TGG | - | chr6_3:66733690-66733709 | None:intergenic | 25.0% |
| ! | GTTTCATAACAGTAACTAAA+AGG | - | chr6_3:66733752-66733771 | None:intergenic | 25.0% |
| !! | TATTTGTTAATCACAGATTG+TGG | - | chr6_3:66733965-66733984 | None:intergenic | 25.0% |
| !!! | GATTAACAAATACTGCTTTT+AGG | + | chr6_3:66733973-66733992 | Msa0957040:intron | 25.0% |
| ! | GGTACAAATGAAAAATATCA+CGG | - | chr6_3:66734163-66734182 | None:intergenic | 25.0% |
| ! | AAAATCAATCAACAAGGAAA+AGG | - | chr6_3:66734184-66734203 | None:intergenic | 25.0% |
| ! | AAACCATGTGATTTAAAAAC+AGG | - | chr6_3:66734257-66734276 | None:intergenic | 25.0% |
| !!! | TGTTTTTAAATCACATGGTT+TGG | + | chr6_3:66734256-66734275 | Msa0957040:CDS | 25.0% |
| !! | TAATACGATGAGCATTTTAA+AGG | + | chr6_3:66734351-66734370 | Msa0957040:intron | 25.0% |
| !!! | AAAGTTCTGAATGATTTCAA+TGG | - | chr6_3:66734764-66734783 | None:intergenic | 25.0% |
| ! | TACATTAAAACAAGACAACA+GGG | - | chr6_3:66735268-66735287 | None:intergenic | 25.0% |
| ! | ATACATTAAAACAAGACAAC+AGG | - | chr6_3:66735269-66735288 | None:intergenic | 25.0% |
| !!! | TTTGCTAATGTTCTAGAAAT+GGG | + | chr6_3:66735313-66735332 | Msa0957040:intron | 25.0% |
| ! | TTTAATTATATAGGACCTTG+AGG | + | chr6_3:66735717-66735736 | Msa0957040:intron | 25.0% |
| !! | TTTACATTAGTACTTTGAGA+TGG | + | chr6_3:66735774-66735793 | Msa0957040:intron | 25.0% |
| ! | TGTATTTCTCTTATCCTTTA+AGG | + | chr6_3:66735890-66735909 | Msa0957040:CDS | 25.0% |
| AAATAGAGTTGAAAAGTTGG+AGG | - | chr6_3:66729127-66729146 | None:intergenic | 30.0% | |
| !!! | AAATGAGGTTTGGGTTTTTT+GGG | - | chr6_3:66729161-66729180 | None:intergenic | 30.0% |
| AGAAGAATGAAATGAGGTTT+GGG | - | chr6_3:66729170-66729189 | None:intergenic | 30.0% | |
| AAGAAGAATGAAATGAGGTT+TGG | - | chr6_3:66729171-66729190 | None:intergenic | 30.0% | |
| GGTTTGCATTTGAATTGTAA+TGG | - | chr6_3:66729326-66729345 | None:intergenic | 30.0% | |
| TTATACCGAAAGTTGTAACA+TGG | + | chr6_3:66729483-66729502 | Msa0957040:CDS | 30.0% | |
| TATACCGAAAGTTGTAACAT+GGG | + | chr6_3:66729484-66729503 | Msa0957040:CDS | 30.0% | |
| AACCAACATAATCTACAATC+GGG | - | chr6_3:66729883-66729902 | None:intergenic | 30.0% | |
| TTACTAGCAAAGTACAAAAC+CGG | + | chr6_3:66730072-66730091 | Msa0957040:intron | 30.0% | |
| ATGAAACTTCAAAATAGTCC+CGG | - | chr6_3:66730094-66730113 | None:intergenic | 30.0% | |
| CATACATTGAGATACTATGA+TGG | + | chr6_3:66730111-66730130 | Msa0957040:intron | 30.0% | |
| ACCGCTGATGTAAAAAATAT+AGG | + | chr6_3:66730201-66730220 | Msa0957040:intron | 30.0% | |
| TAACATATATGTAACGGTGT+CGG | - | chr6_3:66730230-66730249 | None:intergenic | 30.0% | |
| ATAAATCACTAACGCAAAGA+GGG | - | chr6_3:66730667-66730686 | None:intergenic | 30.0% | |
| TATAAATCACTAACGCAAAG+AGG | - | chr6_3:66730668-66730687 | None:intergenic | 30.0% | |
| ! | AGGACTAAATTGATAATACG+TGG | + | chr6_3:66730906-66730925 | Msa0957040:intron | 30.0% |
| CAATTGAATAGTAGTCAAGT+TGG | + | chr6_3:66731257-66731276 | Msa0957040:intron | 30.0% | |
| AGGAAAAACAGAAGAAAAGA+CGG | - | chr6_3:66731911-66731930 | None:intergenic | 30.0% | |
| GTTACTCACTGAACAATAAA+AGG | + | chr6_3:66731952-66731971 | Msa0957040:intron | 30.0% | |
| AAAAAATCACCCCTAAAGAT+AGG | + | chr6_3:66732002-66732021 | Msa0957040:intron | 30.0% | |
| TAAACATGACTTATGCAACT+TGG | + | chr6_3:66732073-66732092 | Msa0957040:intron | 30.0% | |
| ATGCAACTTGGCATATATAT+AGG | + | chr6_3:66732085-66732104 | Msa0957040:intron | 30.0% | |
| AAAGATTCACCACTGAAAAT+AGG | + | chr6_3:66732177-66732196 | Msa0957040:intron | 30.0% | |
| AAGATTCACCACTGAAAATA+GGG | + | chr6_3:66732178-66732197 | Msa0957040:intron | 30.0% | |
| ACACAATATTTGCTCATTGT+AGG | - | chr6_3:66732305-66732324 | None:intergenic | 30.0% | |
| ATGTTGTTGTATTCTTAGGA+CGG | + | chr6_3:66732605-66732624 | Msa0957040:intron | 30.0% | |
| !!! | CGGTTTTTTGAAGTTCTTAT+TGG | + | chr6_3:66732625-66732644 | Msa0957040:CDS | 30.0% |
| ACAAATACAAGGTGTGTATA+TGG | + | chr6_3:66732924-66732943 | Msa0957040:intron | 30.0% | |
| ! | TTTTTCTTGAGACTTAGAGA+CGG | + | chr6_3:66733003-66733022 | Msa0957040:intron | 30.0% |
| ! | TCTCTTTAGGTTACAAAGTA+AGG | + | chr6_3:66733071-66733090 | Msa0957040:intron | 30.0% |
| ! | TTTGGTTTATTCTTGTAGGT+AGG | + | chr6_3:66733228-66733247 | Msa0957040:intron | 30.0% |
| TTGGTTTATTCTTGTAGGTA+GGG | + | chr6_3:66733229-66733248 | Msa0957040:intron | 30.0% | |
| !! | AATCACTGGTTTGTTAACAT+CGG | + | chr6_3:66733254-66733273 | Msa0957040:CDS | 30.0% |
| TCATTCCTTTATCACTTTGT+TGG | + | chr6_3:66733412-66733431 | Msa0957040:intron | 30.0% | |
| CATTCCTTTATCACTTTGTT+GGG | + | chr6_3:66733413-66733432 | Msa0957040:intron | 30.0% | |
| TTCCTTCATTTCTTGAATAG+TGG | + | chr6_3:66733442-66733461 | Msa0957040:intron | 30.0% | |
| AACCACTATTCAAGAAATGA+AGG | - | chr6_3:66733447-66733466 | None:intergenic | 30.0% | |
| ATTGCAGTTTCCATTTCAAT+CGG | + | chr6_3:66733677-66733696 | Msa0957040:CDS | 30.0% | |
| TAGTTACTGTTATGAAACAG+AGG | + | chr6_3:66733754-66733773 | Msa0957040:intron | 30.0% | |
| TTGTTCTGCAATACAGTATT+TGG | + | chr6_3:66733861-66733880 | Msa0957040:intron | 30.0% | |
| CGTGCAGGATTATTATATTT+CGG | - | chr6_3:66734019-66734038 | None:intergenic | 30.0% | |
| TACATATTGCCCTAATGTTT+GGG | - | chr6_3:66734054-66734073 | None:intergenic | 30.0% | |
| ATACATATTGCCCTAATGTT+TGG | - | chr6_3:66734055-66734074 | None:intergenic | 30.0% | |
| ACAATCAGATATAGATGCTT+GGG | - | chr6_3:66734282-66734301 | None:intergenic | 30.0% | |
| TACAATCAGATATAGATGCT+TGG | - | chr6_3:66734283-66734302 | None:intergenic | 30.0% | |
| TTAACTGCACTATATTGTCT+CGG | + | chr6_3:66734645-66734664 | Msa0957040:CDS | 30.0% | |
| CTGATATTATTATGTCCTTC+AGG | + | chr6_3:66734935-66734954 | Msa0957040:intron | 30.0% | |
| !!! | CAAGGATTGGTTAATACTTT+TGG | + | chr6_3:66734960-66734979 | Msa0957040:CDS | 30.0% |
| !! | TTCTAGAACATTAGCAAACA+TGG | - | chr6_3:66735311-66735330 | None:intergenic | 30.0% |
| !! | GTTTGCTAATGTTCTAGAAA+TGG | + | chr6_3:66735312-66735331 | Msa0957040:intron | 30.0% |
| AACACTGTTCATAACTAGAA+AGG | - | chr6_3:66735357-66735376 | None:intergenic | 30.0% | |
| TTATGAACAGTGTTGTCAAT+TGG | + | chr6_3:66735363-66735382 | Msa0957040:intron | 30.0% | |
| TTGTACTAAATAGCATATCG+CGG | + | chr6_3:66735457-66735476 | Msa0957040:intron | 30.0% | |
| ! | TAACATGTGTTGCTAAATAG+TGG | - | chr6_3:66735528-66735547 | None:intergenic | 30.0% |
| TCCATTTAGTTATGGAACTT+CGG | - | chr6_3:66735563-66735582 | None:intergenic | 30.0% | |
| ATGATTATATGTCTTCCTCA+AGG | - | chr6_3:66735735-66735754 | None:intergenic | 30.0% | |
| ATGATGAATCATGTCGTCTA+AGG | - | chr6_3:66729089-66729108 | None:intergenic | 35.0% | |
| !!! | GAAATGAGGTTTGGGTTTTT+TGG | - | chr6_3:66729162-66729181 | None:intergenic | 35.0% |
| AGATAAGGAGAGATGGTAAT+GGG | - | chr6_3:66729240-66729259 | None:intergenic | 35.0% | |
| AAGATAAGGAGAGATGGTAA+TGG | - | chr6_3:66729241-66729260 | None:intergenic | 35.0% | |
| !! | CGTGATAATGATAGTGCTTT+TGG | - | chr6_3:66729347-66729366 | None:intergenic | 35.0% |
| AGACTAACACACTAACATGA+AGG | + | chr6_3:66729705-66729724 | Msa0957040:intron | 35.0% | |
| TGTCTAATATATGTCGTGTC+TGG | + | chr6_3:66729742-66729761 | Msa0957040:intron | 35.0% | |
| TACCCGATTGTAGATTATGT+TGG | + | chr6_3:66729878-66729897 | Msa0957040:intron | 35.0% | |
| TGAGTGACTCTATTAATGTC+AGG | + | chr6_3:66730041-66730060 | Msa0957040:intron | 35.0% | |
| GAGTGACTCTATTAATGTCA+GGG | + | chr6_3:66730042-66730061 | Msa0957040:intron | 35.0% | |
| TACTAGCAAAGTACAAAACC+GGG | + | chr6_3:66730073-66730092 | Msa0957040:intron | 35.0% | |
| TTTGTAGGACACTCTCAAAT+AGG | + | chr6_3:66730803-66730822 | Msa0957040:intron | 35.0% | |
| TAGTTTCTGACAGCATGATA+AGG | + | chr6_3:66730886-66730905 | Msa0957040:intron | 35.0% | |
| CTTCTAAACTTGTGCCTTAA+GGG | + | chr6_3:66731110-66731129 | Msa0957040:intron | 35.0% | |
| !! | AATGTTAACTTGTGCCCTTA+AGG | - | chr6_3:66731127-66731146 | None:intergenic | 35.0% |
| !! | GAATAGTAGTCAAGTTGGTT+AGG | + | chr6_3:66731262-66731281 | Msa0957040:intron | 35.0% |
| ! | GACTTTTAGTACATCACGAT+CGG | + | chr6_3:66731608-66731627 | Msa0957040:intron | 35.0% |
| !!! | TTAGGGGTGATTTTTTCAAC+AGG | - | chr6_3:66731998-66732017 | None:intergenic | 35.0% |
| ACTACTTCCACCTATCTTTA+GGG | - | chr6_3:66732015-66732034 | None:intergenic | 35.0% | |
| AACTACTTCCACCTATCTTT+AGG | - | chr6_3:66732016-66732035 | None:intergenic | 35.0% | |
| TAAAGATAGGTGGAAGTAGT+TGG | + | chr6_3:66732015-66732034 | Msa0957040:intron | 35.0% | |
| AGATTCACCACTGAAAATAG+GGG | + | chr6_3:66732179-66732198 | Msa0957040:intron | 35.0% | |
| ! | TTTTCTAACTCTTGGTTGTG+AGG | - | chr6_3:66732385-66732404 | None:intergenic | 35.0% |
| TGGAGTCTTCTCAGTAAAAT+GGG | + | chr6_3:66732667-66732686 | Msa0957040:CDS | 35.0% | |
| !!! | GCAGTTCTTTTGATTTATGC+AGG | + | chr6_3:66732889-66732908 | Msa0957040:intron | 35.0% |
| ACACTAGGTTATACATTCCT+TGG | + | chr6_3:66733031-66733050 | Msa0957040:intron | 35.0% | |
| TGGTTTATTCTTGTAGGTAG+GGG | + | chr6_3:66733230-66733249 | Msa0957040:intron | 35.0% | |
| !! | TGGTTTGTTAACATCGGATT+TGG | + | chr6_3:66733260-66733279 | Msa0957040:CDS | 35.0% |
| !! | GGTTTGTTAACATCGGATTT+GGG | + | chr6_3:66733261-66733280 | Msa0957040:CDS | 35.0% |
| CTCACTGACAAGATCTTTAA+GGG | - | chr6_3:66733289-66733308 | None:intergenic | 35.0% | |
| TCTCACTGACAAGATCTTTA+AGG | - | chr6_3:66733290-66733309 | None:intergenic | 35.0% | |
| TTGTCAGTGAGAATGTTTCA+AGG | + | chr6_3:66733298-66733317 | Msa0957040:CDS | 35.0% | |
| TGTCAGTGAGAATGTTTCAA+GGG | + | chr6_3:66733299-66733318 | Msa0957040:CDS | 35.0% | |
| CTCATGTTTAAGCATGTGTA+TGG | + | chr6_3:66733388-66733407 | Msa0957040:intron | 35.0% | |
| TCATCCCAACAAAGTGATAA+AGG | - | chr6_3:66733420-66733439 | None:intergenic | 35.0% | |
| !!! | ACTGTTATTTTGTTCGAGCA+TGG | + | chr6_3:66733475-66733494 | Msa0957040:CDS | 35.0% |
| ! | TCCTTCTTTTATTGTCACTC+AGG | + | chr6_3:66733508-66733527 | Msa0957040:CDS | 35.0% |
| ACCTGAGTGACAATAAAAGA+AGG | - | chr6_3:66733512-66733531 | None:intergenic | 35.0% | |
| GGTCATGTTTAATTCTGTGT+CGG | + | chr6_3:66733565-66733584 | Msa0957040:intron | 35.0% | |
| !! | GGTTTTCCTTGTATTTCTGT+AGG | + | chr6_3:66733586-66733605 | Msa0957040:intron | 35.0% |
| AACTAAAAGGCTAAAACGAC+TGG | - | chr6_3:66733739-66733758 | None:intergenic | 35.0% | |
| ! | AAAACAACGCTATAGCTTTG+CGG | + | chr6_3:66733820-66733839 | Msa0957040:intron | 35.0% |
| TCACAGATTGTGGAAAATAG+AGG | - | chr6_3:66733955-66733974 | None:intergenic | 35.0% | |
| !!! | GTGCCTGTTTTTAAATCACA+TGG | + | chr6_3:66734251-66734270 | Msa0957040:CDS | 35.0% |
| !! | AGCATTTTAAAGGCTTGGAT+CGG | + | chr6_3:66734361-66734380 | Msa0957040:intron | 35.0% |
| ACAGTGACTTACATACTTAC+AGG | + | chr6_3:66734399-66734418 | Msa0957040:intron | 35.0% | |
| TTGGAAAGATAGAACCTGTA+TGG | - | chr6_3:66734553-66734572 | None:intergenic | 35.0% | |
| ATAAACAGCAACTCTAGTCA+AGG | - | chr6_3:66734619-66734638 | None:intergenic | 35.0% | |
| ! | CTCTTATCATTTCTTTTCCG+AGG | + | chr6_3:66734725-66734744 | Msa0957040:intron | 35.0% |
| ! | GAATGATTTCAATGGTGGAA+TGG | - | chr6_3:66734756-66734775 | None:intergenic | 35.0% |
| ! | GTTCTGAATGATTTCAATGG+TGG | - | chr6_3:66734761-66734780 | None:intergenic | 35.0% |
| ! | TATTATGTCCTTCAGGTTCA+AGG | + | chr6_3:66734942-66734961 | Msa0957040:intron | 35.0% |
| !! | AATACTTTTGGAGATCTTCG+TGG | + | chr6_3:66734972-66734991 | Msa0957040:CDS | 35.0% |
| ! | GCAATGTGTTTAGTTTAGCT+TGG | + | chr6_3:66735192-66735211 | Msa0957040:CDS | 35.0% |
| TCTGGAGATATTTGTCTTGA+AGG | + | chr6_3:66735215-66735234 | Msa0957040:CDS | 35.0% | |
| TCCGAAGTTCCATAACTAAA+TGG | + | chr6_3:66735559-66735578 | Msa0957040:intron | 35.0% | |
| ! | ACACATCTGCAGTATTTTAC+AGG | - | chr6_3:66735873-66735892 | None:intergenic | 35.0% |
| CCACTTAAAATTTCCACATC+TGG | - | chr6_3:66735916-66735935 | None:intergenic | 35.0% | |
| ! | CCAGATGTGGAAATTTTAAG+TGG | + | chr6_3:66735913-66735932 | Msa0957040:CDS | 35.0% |
| !! | GTTACTGTCTCGTTTTTATG+AGG | + | chr6_3:66736014-66736033 | Msa0957040:CDS | 35.0% |
| !!! | AGGTTTGGGTTTTTTGGGAT+AGG | - | chr6_3:66729156-66729175 | None:intergenic | 40.0% |
| TGAAGGAAGATAAGGAGAGA+TGG | - | chr6_3:66729247-66729266 | None:intergenic | 40.0% | |
| GATCCAGTTCAGCTACATTA+GGG | - | chr6_3:66729430-66729449 | None:intergenic | 40.0% | |
| ! | AACTGGATCCGAAAGTTGAT+GGG | + | chr6_3:66729441-66729460 | Msa0957040:CDS | 40.0% |
| TGTTGCAACCCATCAACTTT+CGG | - | chr6_3:66729452-66729471 | None:intergenic | 40.0% | |
| AGCTCCCATGTTACAACTTT+CGG | - | chr6_3:66729491-66729510 | None:intergenic | 40.0% | |
| !!! | CTATCCATGCCCATTTTTTC+TGG | + | chr6_3:66729590-66729609 | Msa0957040:CDS | 40.0% |
| GTTACCAGAAAAAATGGGCA+TGG | - | chr6_3:66729597-66729616 | None:intergenic | 40.0% | |
| ACTCTTGTATCTATGGTGTG+CGG | + | chr6_3:66730459-66730478 | Msa0957040:intron | 40.0% | |
| ! | AAACTCGGTGACGAATTTGA+TGG | - | chr6_3:66730786-66730805 | None:intergenic | 40.0% |
| AAATTCGTCACCGAGTTTGT+AGG | + | chr6_3:66730788-66730807 | Msa0957040:intron | 40.0% | |
| !! | TTGAGAGTGTCCTACAAACT+CGG | - | chr6_3:66730801-66730820 | None:intergenic | 40.0% |
| GCTTCTAAACTTGTGCCTTA+AGG | + | chr6_3:66731109-66731128 | Msa0957040:intron | 40.0% | |
| ACCAAGTAATTCTGGTCAAG+TGG | + | chr6_3:66731745-66731764 | Msa0957040:intron | 40.0% | |
| ACCACTTGACCAGAATTACT+TGG | - | chr6_3:66731749-66731768 | None:intergenic | 40.0% | |
| ! | TTCCTGGGTGGAAAACTTTT+TGG | + | chr6_3:66731815-66731834 | Msa0957040:intron | 40.0% |
| AAATCACCCCTAAAGATAGG+TGG | + | chr6_3:66732005-66732024 | Msa0957040:intron | 40.0% | |
| CTACTTCCACCTATCTTTAG+GGG | - | chr6_3:66732014-66732033 | None:intergenic | 40.0% | |
| GATTCACCACTGAAAATAGG+GGG | + | chr6_3:66732180-66732199 | Msa0957040:intron | 40.0% | |
| TGAAAATAGGGGGAACTAGT+TGG | + | chr6_3:66732190-66732209 | Msa0957040:intron | 40.0% | |
| !!! | GTGTTTTTTTAGGCGAACCA+AGG | + | chr6_3:66732357-66732376 | Msa0957040:intron | 40.0% |
| ! | ACTCTGAAAGGGAACTAATG+TGG | - | chr6_3:66732530-66732549 | None:intergenic | 40.0% |
| TTACTGAGAAGACTCCACAA+CGG | - | chr6_3:66732664-66732683 | None:intergenic | 40.0% | |
| GTGGAGTCTTCTCAGTAAAA+TGG | + | chr6_3:66732666-66732685 | Msa0957040:CDS | 40.0% | |
| ACACTAAGAGCTCAGATCTT+TGG | + | chr6_3:66732769-66732788 | Msa0957040:CDS | 40.0% | |
| AGGTTATACATTCCTTGGTC+AGG | + | chr6_3:66733036-66733055 | Msa0957040:intron | 40.0% | |
| CAGTGACCTACAGAAATACA+AGG | - | chr6_3:66733595-66733614 | None:intergenic | 40.0% | |
| ! | CTTGTATTTCTGTAGGTCAC+TGG | + | chr6_3:66733593-66733612 | Msa0957040:intron | 40.0% |
| ! | TTTTACTCTATCCCCTCAAC+TGG | + | chr6_3:66733631-66733650 | Msa0957040:CDS | 40.0% |
| ATCATCAGAACAGCCAGAAT+TGG | - | chr6_3:66733659-66733678 | None:intergenic | 40.0% | |
| ! | TTTCGGCTGAGCATTGTTTA+AGG | - | chr6_3:66734002-66734021 | None:intergenic | 40.0% |
| TTCCTCCATTCCCAAACATT+AGG | + | chr6_3:66734041-66734060 | Msa0957040:intron | 40.0% | |
| TCCTCCATTCCCAAACATTA+GGG | + | chr6_3:66734042-66734061 | Msa0957040:intron | 40.0% | |
| ATTGCCCTAATGTTTGGGAA+TGG | - | chr6_3:66734049-66734068 | None:intergenic | 40.0% | |
| GGAACTCACTGTTCTAATAG+CGG | - | chr6_3:66734321-66734340 | None:intergenic | 40.0% | |
| !! | CGATGAGCATTTTAAAGGCT+TGG | + | chr6_3:66734356-66734375 | Msa0957040:intron | 40.0% |
| TTACAGGTTCGATCCTTTAG+TGG | + | chr6_3:66734415-66734434 | Msa0957040:intron | 40.0% | |
| GCTTAGCAAACATAGCCATT+TGG | - | chr6_3:66734450-66734469 | None:intergenic | 40.0% | |
| ! | AATGGCTATGTTTGCTAAGC+AGG | + | chr6_3:66734450-66734469 | Msa0957040:CDS | 40.0% |
| GTTGATTATGGGATCCATAC+AGG | + | chr6_3:66734536-66734555 | Msa0957040:intron | 40.0% | |
| GTTCTATCTTTCCAATCGAG+CGG | + | chr6_3:66734558-66734577 | Msa0957040:CDS | 40.0% | |
| ! | ATGGTGGAATGGAAAATCCT+CGG | - | chr6_3:66734745-66734764 | None:intergenic | 40.0% |
| !! | TGCTGTTATTTCTTGCTCTC+AGG | + | chr6_3:66734792-66734811 | Msa0957040:intron | 40.0% |
| !! | GCTGTTATTTCTTGCTCTCA+GGG | + | chr6_3:66734793-66734812 | Msa0957040:intron | 40.0% |
| TCAACTCTCTGTTGGAACAA+TGG | + | chr6_3:66734816-66734835 | Msa0957040:CDS | 40.0% | |
| ! | GGAACAATGGCGTCTTTTAT+TGG | + | chr6_3:66734829-66734848 | Msa0957040:CDS | 40.0% |
| TAACCAATCCTTGAACCTGA+AGG | - | chr6_3:66734953-66734972 | None:intergenic | 40.0% | |
| ! | AGATCTTCGTGGAACTTTTG+CGG | + | chr6_3:66734983-66735002 | Msa0957040:CDS | 40.0% |
| ! | AGGATCAACTCTGTTTTGTC+TGG | + | chr6_3:66735014-66735033 | Msa0957040:CDS | 40.0% |
| !! | GTGTTTAGTTTAGCTTGGTC+TGG | + | chr6_3:66735197-66735216 | Msa0957040:CDS | 40.0% |
| GTGTTGTCAATTGGAGATTG+CGG | + | chr6_3:66735372-66735391 | Msa0957040:intron | 40.0% | |
| TTGGAGATTGCGGAAAATAG+CGG | + | chr6_3:66735382-66735401 | Msa0957040:intron | 40.0% | |
| !! | TTATCCTTTAAGGCCAGATG+TGG | + | chr6_3:66735900-66735919 | Msa0957040:CDS | 40.0% |
| !! | ATTTCCACATCTGGCCTTAA+AGG | - | chr6_3:66735907-66735926 | None:intergenic | 40.0% |
| GGATGTCATTGGGAGGATTT+AGG | - | chr6_3:66729204-66729223 | None:intergenic | 45.0% | |
| ! | GTGTTGTTGGGGATGTCATT+GGG | - | chr6_3:66729214-66729233 | None:intergenic | 45.0% |
| ! | AGTGTTGTTGGGGATGTCAT+TGG | - | chr6_3:66729215-66729234 | None:intergenic | 45.0% |
| !! | GTAATGGGAGAGTGTTGTTG+GGG | - | chr6_3:66729225-66729244 | None:intergenic | 45.0% |
| !! | GGTAATGGGAGAGTGTTGTT+GGG | - | chr6_3:66729226-66729245 | None:intergenic | 45.0% |
| !! | TGGTAATGGGAGAGTGTTGT+TGG | - | chr6_3:66729227-66729246 | None:intergenic | 45.0% |
| CAGTTCAGCTACATTAGGGT+CGG | - | chr6_3:66729426-66729445 | None:intergenic | 45.0% | |
| GGATCCAGTTCAGCTACATT+AGG | - | chr6_3:66729431-66729450 | None:intergenic | 45.0% | |
| GAACTGGATCCGAAAGTTGA+TGG | + | chr6_3:66729440-66729459 | Msa0957040:CDS | 45.0% | |
| !! | AGTTGATGGGTTGCAACAAG+AGG | + | chr6_3:66729454-66729473 | Msa0957040:CDS | 45.0% |
| ! | ACATGAAGGTGTGTTGTGTC+TGG | + | chr6_3:66729719-66729738 | Msa0957040:intron | 45.0% |
| !! | TTTTTACATCAGCGGTGTCG+CGG | - | chr6_3:66730197-66730216 | None:intergenic | 45.0% |
| TTTATCTGGGTTGTCCGACA+CGG | + | chr6_3:66730513-66730532 | Msa0957040:intron | 45.0% | |
| TCTCCTGAGCAATTTGTCCT+GGG | - | chr6_3:66731783-66731802 | None:intergenic | 45.0% | |
| TTCTCCTGAGCAATTTGTCC+TGG | - | chr6_3:66731784-66731803 | None:intergenic | 45.0% | |
| AGAACCCAAGTTCGATTCCT+GGG | + | chr6_3:66731800-66731819 | Msa0957040:intron | 45.0% | |
| ! | GACCAAAAAGTTTTCCACCC+AGG | - | chr6_3:66731820-66731839 | None:intergenic | 45.0% |
| TTTGATCCGAACACACTCCT+GGG | + | chr6_3:66731854-66731873 | Msa0957040:intron | 45.0% | |
| ! | CTAGTTCCCCCTATTTTCAG+TGG | - | chr6_3:66732189-66732208 | None:intergenic | 45.0% |
| AAATAGGGGGAACTAGTTGG+TGG | + | chr6_3:66732193-66732212 | Msa0957040:intron | 45.0% | |
| ACAAGTCCTCGTACAAAAGG+TGG | - | chr6_3:66732470-66732489 | None:intergenic | 45.0% | |
| CACACAAGTCCTCGTACAAA+AGG | - | chr6_3:66732473-66732492 | None:intergenic | 45.0% | |
| TTAGAGACGGATGAGACACT+AGG | + | chr6_3:66733016-66733035 | Msa0957040:intron | 45.0% | |
| TTGTAGGTAGGGGAAATCAC+TGG | + | chr6_3:66733240-66733259 | Msa0957040:intron | 45.0% | |
| GAGAATGTTTCAAGGGATCG+CGG | + | chr6_3:66733306-66733325 | Msa0957040:CDS | 45.0% | |
| ! | TTGGCGCTTTTCTCCACTAA+AGG | - | chr6_3:66734431-66734450 | None:intergenic | 45.0% |
| !! | TAGTGGAGAAAAGCGCCAAA+TGG | + | chr6_3:66734432-66734451 | Msa0957040:CDS | 45.0% |
| ! | CAAGCTTTATACCGCTCGAT+TGG | - | chr6_3:66734572-66734591 | None:intergenic | 45.0% |
| CAATCGAGCGGTATAAAGCT+TGG | + | chr6_3:66734570-66734589 | Msa0957040:CDS | 45.0% | |
| ACTGCACTATATTGTCTCGG+AGG | + | chr6_3:66734648-66734667 | Msa0957040:CDS | 45.0% | |
| TCTCGGAGGAAGCAAAGTTA+AGG | + | chr6_3:66734662-66734681 | Msa0957040:CDS | 45.0% | |
| ! | TGTCCTTCAGGTTCAAGGAT+TGG | + | chr6_3:66734947-66734966 | Msa0957040:intron | 45.0% |
| TCTTTCTAAGCCGTAGGCAA+GGG | - | chr6_3:66735057-66735076 | None:intergenic | 45.0% | |
| CAGTTCTCTTTCTAAGCCGT+AGG | - | chr6_3:66735063-66735082 | None:intergenic | 45.0% | |
| TGGAGATTGCGGAAAATAGC+GGG | + | chr6_3:66735383-66735402 | Msa0957040:intron | 45.0% | |
| CTATAGCGGCTATTACACAG+CGG | - | chr6_3:66735645-66735664 | None:intergenic | 45.0% | |
| CAGGCATAGTCATTGACAGA+AGG | - | chr6_3:66735854-66735873 | None:intergenic | 45.0% | |
| ATGTGGAACTGTAACTGCAC+TGG | + | chr6_3:66735954-66735973 | Msa0957040:CDS | 45.0% | |
| !!! | CATTTTTTTTTTTAATATAT+TGG | - | chr6_3:66732152-66732171 | None:intergenic | 5.0% |
| !! | CAATATATTAAAAAAAAAAA+TGG | + | chr6_3:66732150-66732169 | Msa0957040:intron | 5.0% |
| !!! | TAATTTTTTTATTTATCTTT+AGG | - | chr6_3:66733118-66733137 | None:intergenic | 5.0% |
| !!! | GATTTTTATTTTTTATTTTT+TGG | + | chr6_3:66734198-66734217 | Msa0957040:intron | 5.0% |
| TTGTTGGGGATGTCATTGGG+AGG | - | chr6_3:66729211-66729230 | None:intergenic | 50.0% | |
| CGACCCTAATGTAGCTGAAC+TGG | + | chr6_3:66729424-66729443 | Msa0957040:CDS | 50.0% | |
| TGGGTTGCAACAAGAGGAAG+CGG | + | chr6_3:66729460-66729479 | Msa0957040:CDS | 50.0% | |
| AGTTGTAACATGGGAGCTGC+TGG | + | chr6_3:66729493-66729512 | Msa0957040:CDS | 50.0% | |
| GTTGTAACATGGGAGCTGCT+GGG | + | chr6_3:66729494-66729513 | Msa0957040:CDS | 50.0% | |
| ! | TACGTCAGTGTCGGACTTGA+CGG | + | chr6_3:66729767-66729786 | Msa0957040:intron | 50.0% |
| GGCTACTCGTCTATGAAGCA+CGG | + | chr6_3:66730132-66730151 | Msa0957040:intron | 50.0% | |
| ATGAAGCACGGACTCTGACA+CGG | + | chr6_3:66730144-66730163 | Msa0957040:intron | 50.0% | |
| AACACTCATACGAGCCGTGT+CGG | - | chr6_3:66730530-66730549 | None:intergenic | 50.0% | |
| ! | TACGGGTGTCATAGGAGTGT+CGG | + | chr6_3:66730598-66730617 | Msa0957040:intron | 50.0% |
| AGTGGTTAATGAGTTCCCCC+AGG | + | chr6_3:66731763-66731782 | Msa0957040:intron | 50.0% | |
| TCCTGAGCAATTTGTCCTGG+GGG | - | chr6_3:66731781-66731800 | None:intergenic | 50.0% | |
| CTCCTGAGCAATTTGTCCTG+GGG | - | chr6_3:66731782-66731801 | None:intergenic | 50.0% | |
| GAGAACCCAAGTTCGATTCC+TGG | + | chr6_3:66731799-66731818 | Msa0957040:intron | 50.0% | |
| TCCACCCAGGAATCGAACTT+GGG | - | chr6_3:66731807-66731826 | None:intergenic | 50.0% | |
| TTCCACCCAGGAATCGAACT+TGG | - | chr6_3:66731808-66731827 | None:intergenic | 50.0% | |
| CTTTGATCCGAACACACTCC+TGG | + | chr6_3:66731853-66731872 | Msa0957040:intron | 50.0% | |
| ! | CTCTTGGTTGTGAGGTACCT+TGG | - | chr6_3:66732377-66732396 | None:intergenic | 50.0% |
| ! | AAGCCACCACCTTTTGTACG+AGG | + | chr6_3:66732461-66732480 | Msa0957040:intron | 50.0% |
| AGTCCTCGTACAAAAGGTGG+TGG | - | chr6_3:66732467-66732486 | None:intergenic | 50.0% | |
| AGAAGACTCCACAACGGTTC+GGG | - | chr6_3:66732658-66732677 | None:intergenic | 50.0% | |
| GAGAAGACTCCACAACGGTT+CGG | - | chr6_3:66732659-66732678 | None:intergenic | 50.0% | |
| TTTCAAGGGATCGCGGATTC+AGG | + | chr6_3:66733313-66733332 | Msa0957040:CDS | 50.0% | |
| TTCAAGGGATCGCGGATTCA+GGG | + | chr6_3:66733314-66733333 | Msa0957040:CDS | 50.0% | |
| ! | CGGATTCAGGGCATTATCTG+AGG | + | chr6_3:66733326-66733345 | Msa0957040:CDS | 50.0% |
| CAGAATTGGAGCCAGTTGAG+GGG | - | chr6_3:66733645-66733664 | None:intergenic | 50.0% | |
| CCAGAATTGGAGCCAGTTGA+GGG | - | chr6_3:66733646-66733665 | None:intergenic | 50.0% | |
| GCCCTAATGTTTGGGAATGG+AGG | - | chr6_3:66734046-66734065 | None:intergenic | 50.0% | |
| CGGAGGAAGCAAAGTTAAGG+CGG | + | chr6_3:66734665-66734684 | Msa0957040:CDS | 50.0% | |
| TCTCAGGGTCAACTCTCTGT+TGG | + | chr6_3:66734808-66734827 | Msa0957040:intron | 50.0% | |
| ! | GAACTTTTGCGGCTGTTGAG+AGG | + | chr6_3:66734994-66735013 | Msa0957040:CDS | 50.0% |
| CTCTTTCTAAGCCGTAGGCA+AGG | - | chr6_3:66735058-66735077 | None:intergenic | 50.0% | |
| CTATAGCACTGTTGCGTAGC+AGG | - | chr6_3:66735419-66735438 | None:intergenic | 50.0% | |
| CTGCTACGCAACAGTGCTAT+AGG | + | chr6_3:66735417-66735436 | Msa0957040:intron | 50.0% | |
| GCTATAGCGCTATTGCACAG+CGG | - | chr6_3:66735506-66735525 | None:intergenic | 50.0% | |
| ! | ACACAGCGGACTTTGGACTT+TGG | - | chr6_3:66735631-66735650 | None:intergenic | 50.0% |
| ! | GGCTATTACACAGCGGACTT+TGG | - | chr6_3:66735638-66735657 | None:intergenic | 50.0% |
| ! | GGAACTGTAACTGCACTGGT+TGG | + | chr6_3:66735958-66735977 | Msa0957040:CDS | 50.0% |
| CTGCCACGTGCTTACATCAC+TGG | + | chr6_3:66729392-66729411 | Msa0957040:CDS | 55.0% | |
| GGTCCAGTGATGTAAGCACG+TGG | - | chr6_3:66729398-66729417 | None:intergenic | 55.0% | |
| AGCTACATTAGGGTCGGACG+CGG | - | chr6_3:66729420-66729439 | None:intergenic | 55.0% | |
| TGTCTGGCGTACGTCAGTGT+CGG | + | chr6_3:66729758-66729777 | Msa0957040:intron | 55.0% | |
| ! | TCGGACTTGACGGACACATG+TGG | + | chr6_3:66729777-66729796 | Msa0957040:intron | 55.0% |
| ! | ACGTGTCGTACGGGTGTCAT+AGG | + | chr6_3:66730590-66730609 | Msa0957040:intron | 55.0% |
| GCAAAGAGGGACGCTGGATT+AGG | - | chr6_3:66730654-66730673 | None:intergenic | 55.0% | |
| ACTAACGCAAAGAGGGACGC+TGG | - | chr6_3:66730660-66730679 | None:intergenic | 55.0% | |
| TCCCCCAGGACAAATTGCTC+AGG | + | chr6_3:66731777-66731796 | Msa0957040:intron | 55.0% | |
| ACCCAAGTTCGATTCCTGGG+TGG | + | chr6_3:66731803-66731822 | Msa0957040:intron | 55.0% | |
| ! | CTCGTTCCCAGGAGTGTGTT+CGG | - | chr6_3:66731863-66731882 | None:intergenic | 55.0% |
| AACACACTCCTGGGAACGAG+AGG | + | chr6_3:66731863-66731882 | Msa0957040:intron | 55.0% | |
| ACACACTCCTGGGAACGAGA+GGG | + | chr6_3:66731864-66731883 | Msa0957040:intron | 55.0% | |
| TGTGTAACCCTCTCGTTCCC+AGG | - | chr6_3:66731874-66731893 | None:intergenic | 55.0% | |
| !! | TAGGGGGAACTAGTTGGTGG+TGG | + | chr6_3:66732196-66732215 | Msa0957040:intron | 55.0% |
| ! | CCCTCAACTGGCTCCAATTC+TGG | + | chr6_3:66733643-66733662 | Msa0957040:CDS | 55.0% |
| GCCAGAATTGGAGCCAGTTG+AGG | - | chr6_3:66733647-66733666 | None:intergenic | 55.0% | |
| GGGAATGGAGGAATACGTGC+AGG | - | chr6_3:66734034-66734053 | None:intergenic | 55.0% | |
| GTTGACGATGCCCTTGCCTA+CGG | + | chr6_3:66735044-66735063 | Msa0957040:CDS | 55.0% | |
| !! | ACTGCACTGGTTGGTGCTAG+TGG | + | chr6_3:66735967-66735986 | Msa0957040:CDS | 55.0% |
| !! | ACTGGTTGGTGCTAGTGGTG+CGG | + | chr6_3:66735972-66735991 | Msa0957040:CDS | 55.0% |
| GCTACATTAGGGTCGGACGC+GGG | - | chr6_3:66729419-66729438 | None:intergenic | 60.0% | |
| CACTGCGACACGACACGACA+CGG | + | chr6_3:66730168-66730187 | Msa0957040:intron | 60.0% | |
| CCGTACGACACGTGTCGAAC+CGG | - | chr6_3:66730583-66730602 | None:intergenic | 60.0% | |
| ! | CCGGTTCGACACGTGTCGTA+CGG | + | chr6_3:66730580-66730599 | Msa0957040:intron | 60.0% |
| CGGTTCGACACGTGTCGTAC+GGG | + | chr6_3:66730581-66730600 | Msa0957040:intron | 60.0% | |
| ! | ACGCTGGATTAGGCGTGTCG+CGG | - | chr6_3:66730644-66730663 | None:intergenic | 60.0% |
| GTGTCAGACCCGAACCGTTG+TGG | + | chr6_3:66732647-66732666 | Msa0957040:CDS | 60.0% | |
| !! | CTGGTTGGTGCTAGTGGTGC+GGG | + | chr6_3:66735973-66735992 | Msa0957040:CDS | 60.0% |
| TGTCGGACACCGACGCGTGT+CGG | + | chr6_3:66730615-66730634 | Msa0957040:intron | 65.0% | |
| TCGCGGTGTCCGACACGCGT+CGG | - | chr6_3:66730627-66730646 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 66729066 | 66736041 | 66729066 | ID=Msa0957040;Name=Msa0957040 |
| chr6_3 | mRNA | 66729066 | 66736041 | 66729066 | ID=Msa0957040-mRNA-1;Parent=Msa0957040;Name=Msa0957040-mRNA-1;_AED=0.12;_eAED=0.13;_QI=149|0.81|0.75|0.91|1|1|12|0|557 |
| chr6_3 | exon | 66729066 | 66729611 | 66729066 | ID=Msa0957040-mRNA-1:exon:12416;Parent=Msa0957040-mRNA-1 |
| chr6_3 | exon | 66732623 | 66732810 | 66732623 | ID=Msa0957040-mRNA-1:exon:12417;Parent=Msa0957040-mRNA-1 |
| chr6_3 | exon | 66732911 | 66732934 | 66732911 | ID=Msa0957040-mRNA-1:exon:12418;Parent=Msa0957040-mRNA-1 |
| chr6_3 | exon | 66733246 | 66733372 | 66733246 | ID=Msa0957040-mRNA-1:exon:12419;Parent=Msa0957040-mRNA-1 |
| chr6_3 | exon | 66733462 | 66733529 | 66733462 | ID=Msa0957040-mRNA-1:exon:12420;Parent=Msa0957040-mRNA-1 |
| chr6_3 | exon | 66733608 | 66733698 | 66733608 | ID=Msa0957040-mRNA-1:exon:12421;Parent=Msa0957040-mRNA-1 |
| chr6_3 | exon | 66734231 | 66734331 | 66734231 | ID=Msa0957040-mRNA-1:exon:12422;Parent=Msa0957040-mRNA-1 |
| chr6_3 | exon | 66734421 | 66734471 | 66734421 | ID=Msa0957040-mRNA-1:exon:12423;Parent=Msa0957040-mRNA-1 |
| chr6_3 | exon | 66734558 | 66734686 | 66734558 | ID=Msa0957040-mRNA-1:exon:12424;Parent=Msa0957040-mRNA-1 |
| chr6_3 | exon | 66734814 | 66734876 | 66734814 | ID=Msa0957040-mRNA-1:exon:12425;Parent=Msa0957040-mRNA-1 |
| chr6_3 | exon | 66734957 | 66735236 | 66734957 | ID=Msa0957040-mRNA-1:exon:12426;Parent=Msa0957040-mRNA-1 |
| chr6_3 | exon | 66735887 | 66736041 | 66735887 | ID=Msa0957040-mRNA-1:exon:12427;Parent=Msa0957040-mRNA-1 |
| chr6_3 | five_prime_UTR | 66729066 | 66729214 | 66729066 | ID=Msa0957040-mRNA-1:five_prime_utr;Parent=Msa0957040-mRNA-1 |
| chr6_3 | CDS | 66729215 | 66729611 | 66729215 | ID=Msa0957040-mRNA-1:cds;Parent=Msa0957040-mRNA-1 |
| chr6_3 | CDS | 66732623 | 66732810 | 66732623 | ID=Msa0957040-mRNA-1:cds;Parent=Msa0957040-mRNA-1 |
| chr6_3 | CDS | 66732911 | 66732934 | 66732911 | ID=Msa0957040-mRNA-1:cds;Parent=Msa0957040-mRNA-1 |
| chr6_3 | CDS | 66733246 | 66733372 | 66733246 | ID=Msa0957040-mRNA-1:cds;Parent=Msa0957040-mRNA-1 |
| chr6_3 | CDS | 66733462 | 66733529 | 66733462 | ID=Msa0957040-mRNA-1:cds;Parent=Msa0957040-mRNA-1 |
| chr6_3 | CDS | 66733608 | 66733698 | 66733608 | ID=Msa0957040-mRNA-1:cds;Parent=Msa0957040-mRNA-1 |
| chr6_3 | CDS | 66734231 | 66734331 | 66734231 | ID=Msa0957040-mRNA-1:cds;Parent=Msa0957040-mRNA-1 |
| chr6_3 | CDS | 66734421 | 66734471 | 66734421 | ID=Msa0957040-mRNA-1:cds;Parent=Msa0957040-mRNA-1 |
| chr6_3 | CDS | 66734558 | 66734686 | 66734558 | ID=Msa0957040-mRNA-1:cds;Parent=Msa0957040-mRNA-1 |
| chr6_3 | CDS | 66734814 | 66734876 | 66734814 | ID=Msa0957040-mRNA-1:cds;Parent=Msa0957040-mRNA-1 |
| chr6_3 | CDS | 66734957 | 66735236 | 66734957 | ID=Msa0957040-mRNA-1:cds;Parent=Msa0957040-mRNA-1 |
| chr6_3 | CDS | 66735887 | 66736041 | 66735887 | ID=Msa0957040-mRNA-1:cds;Parent=Msa0957040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
