AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1430460


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1430460 MtrunA17_Chr3g0121121 96.334 491 18 0 1 491 1 491 0.0 966
Msa1430460 MtrunA17_Chr7g0275561 35.509 383 225 6 16 390 47 415 1.08e-67 226
Msa1430460 MtrunA17_Chr6g0473071 28.979 421 252 12 32 427 14 412 2.90e-35 136
Msa1430460 MtrunA17_Chr3g0136561 29.040 427 254 14 32 434 7 408 5.05e-35 139
Msa1430460 MtrunA17_Chr7g0268361 25.490 408 278 9 38 434 14 406 4.06e-30 121
Msa1430460 MtrunA17_Chr8g0381061 27.666 347 231 8 54 393 35 368 4.82e-30 120
Msa1430460 MtrunA17_Chr6g0462491 26.754 456 279 15 34 459 25 455 9.96e-30 121
Msa1430460 MtrunA17_Chr7g0255281 25.330 379 261 8 22 395 12 373 1.70e-27 114
Msa1430460 MtrunA17_Chr1g0185761 27.200 375 249 12 44 407 18 379 1.18e-26 111
Msa1430460 MtrunA17_Chr3g0115901 28.528 326 213 5 72 391 73 384 9.22e-26 108
Msa1430460 MtrunA17_Chr1g0153201 28.440 327 195 8 83 402 52 346 2.04e-25 108
Msa1430460 MtrunA17_Chr3g0088781 27.793 367 222 9 83 434 52 390 3.79e-25 107
Msa1430460 MtrunA17_Chr1g0161181 27.123 365 247 10 50 407 27 379 5.45e-25 106
Msa1430460 MtrunA17_Chr6g0467331 25.672 335 232 7 57 389 31 350 9.76e-22 98.6
Msa1430460 MtrunA17_Chr3g0088811 29.200 250 170 4 153 402 4 246 1.17e-21 95.5
Msa1430460 MtrunA17_Chr8g0358271 26.879 346 218 9 62 390 41 368 8.91e-21 94.0
Msa1430460 MtrunA17_Chr7g0220971 25.779 353 242 7 54 401 49 386 2.18e-20 93.2
Msa1430460 MtrunA17_Chr3g0109091 25.220 341 203 13 81 395 77 391 8.67e-20 91.7
Msa1430460 MtrunA17_Chr2g0311491 26.183 317 201 10 175 467 1 308 1.47e-16 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1430460 AT5G62990.1 62.264 424 153 3 32 455 35 451 1.27e-170 490
Msa1430460 AT4G01037.1 32.648 438 239 7 6 406 12 430 1.73e-65 221
Msa1430460 AT5G48040.1 30.296 406 249 10 40 432 30 414 1.13e-35 137
Msa1430460 AT5G45790.2 28.857 350 219 9 58 398 70 398 1.01e-32 129
Msa1430460 AT5G45790.1 30.120 332 198 9 80 398 3 313 7.03e-31 123
Msa1430460 AT3G63090.1 28.534 382 251 11 30 402 9 377 4.29e-30 122
Msa1430460 AT5G21970.1 27.873 409 246 10 52 444 44 419 1.60e-29 120
Msa1430460 AT5G21970.2 27.873 409 246 10 52 444 44 419 1.60e-29 120
Msa1430460 AT2G31290.1 28.000 350 231 8 52 401 24 352 1.44e-28 117
Msa1430460 AT2G31290.2 28.000 350 231 8 52 401 24 352 1.44e-28 117
Msa1430460 AT3G58520.1 27.049 366 242 9 54 408 33 384 2.70e-26 111
Msa1430460 AT4G33495.1 27.226 393 230 11 57 423 47 409 3.49e-26 110
Msa1430460 AT4G08940.1 28.571 315 210 5 72 385 81 381 1.87e-25 108
Msa1430460 AT1G71850.1 25.253 396 259 12 53 429 28 405 3.55e-25 108
Msa1430460 AT4G24320.1 29.551 379 226 11 52 407 21 381 2.27e-24 105
Msa1430460 AT1G79120.1 29.096 354 206 13 58 389 64 394 1.34e-23 103
Msa1430460 AT1G79120.2 29.096 354 206 13 58 389 64 394 1.34e-23 103
Msa1430460 AT1G06440.1 28.025 314 199 8 90 390 71 370 1.56e-23 102
Msa1430460 AT2G39120.1 25.622 402 254 12 46 427 10 386 1.31e-22 100
Msa1430460 AT3G58520.2 27.632 304 197 8 116 408 81 372 1.73e-22 99.8

Find 120 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATTCCTCTCAATTTATT+TGG 0.066976 tig0026659:-34300 None:intergenic
ACAACAAGATTGGAGAATTT+TGG 0.158344 tig0026659:+34688 Msa1430460:CDS
TGATGAGAAGGGTAACTTAT+TGG 0.227907 tig0026659:+34395 Msa1430460:CDS
GCTAGGATTGATAAAGAATT+TGG 0.238807 tig0026659:+34501 Msa1430460:CDS
CTCTCAGCAGGGTTGTTATA+AGG 0.249237 tig0026659:-34150 None:intergenic
CAAACTCGTATAAAATAATT+CGG 0.271674 tig0026659:-34334 None:intergenic
TTCTGCTTCAATTGATTCCT+TGG 0.285857 tig0026659:-34178 None:intergenic
GTTCACCTTGCTCCTGATCT+TGG 0.289171 tig0026659:+33862 Msa1430460:CDS
GAGATAGCATAAGAAGCTTT+TGG 0.290608 tig0026659:-33810 None:intergenic
TCTCTCTCTTCTCATTCTCT+TGG 0.292427 tig0026659:-34472 None:intergenic
TTGTTATAAGGGCACACTTC+TGG 0.313439 tig0026659:-34138 None:intergenic
TAACAACCCTGCTGAGAGTT+TGG 0.314464 tig0026659:+34155 Msa1430460:CDS
TCATTCCTCTCAATTTATTT+GGG 0.340961 tig0026659:-34299 None:intergenic
ACCCATTTCAGAAAGGAGTT+TGG 0.341767 tig0026659:+34273 Msa1430460:CDS
GTCCATCCATTTATCTTGTA+AGG 0.345869 tig0026659:-34436 None:intergenic
GTCCAAACTCCTTTCTGAAA+TGG 0.358720 tig0026659:-34275 None:intergenic
CTGGATGGTCATTGCACAAC+CGG 0.365261 tig0026659:-33906 None:intergenic
ATCGTCTATTTCAACAGTAT+TGG 0.374767 tig0026659:+33777 Msa1430460:CDS
TTCAAAGATGATTATGATGA+TGG 0.377284 tig0026659:+34597 Msa1430460:CDS
ACTGCAAGTGCGGCTGCAGC+TGG 0.378235 tig0026659:-33736 None:intergenic
CACAACCGGGATCTAAAATT+AGG 0.378289 tig0026659:-33892 None:intergenic
TTAATCGGAAGAAAATGTTT+TGG 0.380320 tig0026659:-33550 None:intergenic
TTGAGAGGTGTGGGTGGCCA+TGG 0.383690 tig0026659:-33673 None:intergenic
GCTGTTATAAGAGAGGTTCT+TGG 0.393796 tig0026659:+34213 Msa1430460:CDS
TCTCAGCAGGGTTGTTATAA+GGG 0.401018 tig0026659:-34149 None:intergenic
TCCAAACTCCTTTCTGAAAT+GGG 0.403617 tig0026659:-34274 None:intergenic
GATTTGTTTGACAACAAGAT+TGG 0.413459 tig0026659:+34678 Msa1430460:CDS
AAACTCGTATAAAATAATTC+GGG 0.414063 tig0026659:-34333 None:intergenic
TCAATGATCTTGAATTTGTC+TGG 0.419429 tig0026659:-33925 None:intergenic
CTCAATTGTTTGAACTTCAA+AGG 0.419774 tig0026659:-34051 None:intergenic
TTAAAATTCTGTCCAAATGT+AGG 0.422916 tig0026659:+33569 Msa1430460:CDS
TCCTTGGCCAAACTCTCAGC+AGG 0.434855 tig0026659:-34162 None:intergenic
TGAAAGATAAGCCCTACATT+TGG 0.441339 tig0026659:-33581 None:intergenic
CCTTTCTTAGTCAGCAATAA+CGG 0.444662 tig0026659:+33310 Msa1430460:CDS
TCTCATCAAATCGCTCTACT+AGG 0.444788 tig0026659:-34380 None:intergenic
CAACTATTAAATCAAGAGAA+TGG 0.444997 tig0026659:-34023 None:intergenic
TGGGACTCACGCGGAGGTAA+AGG 0.457292 tig0026659:-34003 None:intergenic
GAAGAGAGAGAAGGAAGGCT+AGG 0.457822 tig0026659:+34484 Msa1430460:CDS
AACTATTAAATCAAGAGAAT+GGG 0.459579 tig0026659:-34022 None:intergenic
CCAACTTTGCCAGTAGTAAC+CGG 0.459749 tig0026659:-33840 None:intergenic
TTGTCATGAGGAACAGAATC+CGG 0.464090 tig0026659:+33491 Msa1430460:CDS
TAAAATTCTGTCCAAATGTA+GGG 0.464670 tig0026659:+33570 Msa1430460:CDS
TGAGGATATATTTGAAGACT+TGG 0.466248 tig0026659:+34623 Msa1430460:CDS
TAATTTAAAGAGGCCTCACC+GGG 0.468128 tig0026659:+34089 Msa1430460:CDS
GTGGAACTGAGGGAATTTAC+CGG 0.468878 tig0026659:-33334 None:intergenic
GAAAGGGGCTTAATTTAAAG+AGG 0.470084 tig0026659:+34079 Msa1430460:CDS
AAGATCATTGACACTTCCTA+TGG 0.476208 tig0026659:+33937 Msa1430460:CDS
TTCGCGACCGCACTCTTGAC+AGG 0.476319 tig0026659:+33464 Msa1430460:CDS
ATAATCAATATCACTGTCAT+CGG 0.482631 tig0026659:-34550 None:intergenic
TCCTCACCGCCGGTTACTAC+TGG 0.486639 tig0026659:+33831 Msa1430460:CDS
TTAATTTAAAGAGGCCTCAC+CGG 0.489651 tig0026659:+34088 Msa1430460:CDS
TTTGAAAGGGCAAAGGGACT+CGG 0.493718 tig0026659:+34353 Msa1430460:CDS
TCTTAACTTTGACAATTACC+AGG 0.497120 tig0026659:-34763 None:intergenic
TGCAGCCGCACTTGCAGTTG+AGG 0.498535 tig0026659:+33741 Msa1430460:CDS
TACGAGTTTGAAAGGGCAAA+GGG 0.499162 tig0026659:+34347 Msa1430460:CDS
TTGGAATGACAATTGAAAAG+AGG 0.501920 tig0026659:+34232 Msa1430460:CDS
CCGTTATTGCTGACTAAGAA+AGG 0.503193 tig0026659:-33310 None:intergenic
AAGCTCAAGTGCACGTCCAT+AGG 0.503889 tig0026659:-33953 None:intergenic
TAACTTATTGGAGAAGGATG+AGG 0.511987 tig0026659:+34407 Msa1430460:CDS
CCGGTTACTACTGGCAAAGT+TGG 0.519367 tig0026659:+33840 Msa1430460:CDS
GGATTGATAAAGAATTTGGC+AGG 0.519833 tig0026659:+34505 Msa1430460:CDS
TTGAATTGTTTACTATCCCA+TGG 0.520794 tig0026659:+33656 Msa1430460:CDS
TGTCAAACAAATCGTTTCCC+AGG 0.524973 tig0026659:-34668 None:intergenic
ATTGTTTGAACTTCAAAGGT+CGG 0.526316 tig0026659:-34047 None:intergenic
GAAGCTGAGGATTATGACCT+GGG 0.526953 tig0026659:+34651 Msa1430460:CDS
TTAGGAGGAAGACCAAGATC+AGG 0.528609 tig0026659:-33874 None:intergenic
TGAGAGGTGTGGGTGGCCAT+GGG 0.529539 tig0026659:-33672 None:intergenic
TGAAGCTGAGGATTATGACC+TGG 0.537130 tig0026659:+34650 Msa1430460:CDS
ACAAGATAAATGGATGGACT+TGG 0.544745 tig0026659:+34440 Msa1430460:CDS
TAATCAATATCACTGTCATC+GGG 0.545096 tig0026659:-34549 None:intergenic
TGTTGTTCCACGAAGAAAAG+TGG 0.545285 tig0026659:-33353 None:intergenic
ATACGAGTTTGAAAGGGCAA+AGG 0.549737 tig0026659:+34346 Msa1430460:CDS
TGTATCGTGCGATACCAACT+TGG 0.550835 tig0026659:+33975 Msa1430460:CDS
TCGATGGATCATAGACAGTA+AGG 0.551421 tig0026659:-33620 None:intergenic
AGGTAAAGGCTTTGCCAAGT+TGG 0.553621 tig0026659:-33989 None:intergenic
GAAGGGTAACTTATTGGAGA+AGG 0.555429 tig0026659:+34401 Msa1430460:CDS
TTATGCTATCTCCTCACCGC+CGG 0.555653 tig0026659:+33821 Msa1430460:CDS
CCACTTGACCCATTTCAGAA+AGG 0.560006 tig0026659:+34266 Msa1430460:CDS
AAACAATTGAGACTTCGAAA+GGG 0.564618 tig0026659:+34063 Msa1430460:CDS
CAAACAATTGAGACTTCGAA+AGG 0.569475 tig0026659:+34062 Msa1430460:CDS
AATGAGAAGAGAGAGAAGGA+AGG 0.573040 tig0026659:+34479 Msa1430460:CDS
CTTAGTTGCGTTGAGAGGTG+TGG 0.573460 tig0026659:-33683 None:intergenic
CCTTTCTGAAATGGGTCAAG+TGG 0.574688 tig0026659:-34266 None:intergenic
TGATCTTGAATTTGTCTGGA+TGG 0.575399 tig0026659:-33921 None:intergenic
CAAACTTTAGCAAGTAATCC+CGG 0.575661 tig0026659:-34107 None:intergenic
GGACTCCCAAATAAATTGAG+AGG 0.578071 tig0026659:+34294 Msa1430460:CDS
CAATTCCTCAACTGCAAGTG+CGG 0.581658 tig0026659:-33746 None:intergenic
AGTAGAGCGATTTGATGAGA+AGG 0.582051 tig0026659:+34383 Msa1430460:CDS
CCCTGCTGAGAGTTTGGCCA+AGG 0.582438 tig0026659:+34161 Msa1430460:CDS
AACAATTGAGACTTCGAAAG+GGG 0.584929 tig0026659:+34064 Msa1430460:CDS
TATAACTTAGTTGCGTTGAG+AGG 0.585447 tig0026659:-33688 None:intergenic
CTTAGTCAGCAATAACGGAC+CGG 0.589570 tig0026659:+33315 Msa1430460:CDS
ATAAATGGATGGACTTGGCG+AGG 0.596180 tig0026659:+34445 Msa1430460:CDS
TGGATGGTCATTGCACAACC+GGG 0.597590 tig0026659:-33905 None:intergenic
AGCCTTACAAGATAAATGGA+TGG 0.598756 tig0026659:+34434 Msa1430460:CDS
TTAGTTGCGTTGAGAGGTGT+GGG 0.602056 tig0026659:-33682 None:intergenic
ACGAAGAAAAGTGGAACTGA+GGG 0.606364 tig0026659:-33344 None:intergenic
CTTAACTTTGACAATTACCA+GGG 0.609265 tig0026659:-34762 None:intergenic
GAAGACCAAGATCAGGAGCA+AGG 0.612166 tig0026659:-33867 None:intergenic
ATGTTGTGCTGTTATAAGAG+AGG 0.617545 tig0026659:+34206 Msa1430460:CDS
AACCGGGATCTAAAATTAGG+AGG 0.618298 tig0026659:-33889 None:intergenic
TATTGCTGACTAAGAAAGGA+TGG 0.618511 tig0026659:-33306 None:intergenic
AATTGAGAGGAATGATTGTG+AGG 0.622196 tig0026659:+34307 Msa1430460:CDS
CACGAAGAAAAGTGGAACTG+AGG 0.624701 tig0026659:-33345 None:intergenic
TAAATGGATGGACTTGGCGA+GGG 0.625962 tig0026659:+34446 Msa1430460:CDS
GTAGAGCGATTTGATGAGAA+GGG 0.626749 tig0026659:+34384 Msa1430460:CDS
GCCAGTAGTAACCGGCGGTG+AGG 0.629295 tig0026659:-33832 None:intergenic
ATAGAGAACAGAAGCAACCC+TGG 0.633738 tig0026659:+34745 Msa1430460:CDS
GTCAAACGAACACATAGTTG+AGG 0.640241 tig0026659:-33712 None:intergenic
AGAGAATGAGAAGAGAGAGA+AGG 0.640932 tig0026659:+34475 Msa1430460:CDS
CCTTGGCCAAACTCTCAGCA+GGG 0.650031 tig0026659:-34161 None:intergenic
AACTCGTATAAAATAATTCG+GGG 0.651846 tig0026659:-34332 None:intergenic
TTGACAGGCATGTTGTCATG+AGG 0.677083 tig0026659:+33479 Msa1430460:CDS
GTTGCGTTGAGAGGTGTGGG+TGG 0.687295 tig0026659:-33679 None:intergenic
TCAAGAGAATGGGACTCACG+CGG 0.693646 tig0026659:-34012 None:intergenic
CAACATGCCTGTCAAGAGTG+CGG 0.698613 tig0026659:-33471 None:intergenic
AGAGAATGGGACTCACGCGG+AGG 0.722473 tig0026659:-34009 None:intergenic
TTTAGCAAGTAATCCCGGTG+AGG 0.724164 tig0026659:-34102 None:intergenic
ATCATAGACAGTAAGGAACG+AGG 0.740778 tig0026659:-33613 None:intergenic
ACTTTGCCAGTAGTAACCGG+CGG 0.778731 tig0026659:-33837 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAAGGTTACATGTTTT+TGG - tig0026659:33406-33425 None:intergenic 20.0%
!!! TTGAAACAGATAGATTTTTA+AGG - tig0026659:33420-33439 None:intergenic 20.0%
!! GATAGTAAACAATTCAAAAA+TGG - tig0026659:33653-33672 None:intergenic 20.0%
!! AACTATTAAATCAAGAGAAT+GGG - tig0026659:34025-34044 None:intergenic 20.0%
!! AAACTCGTATAAAATAATTC+GGG - tig0026659:34336-34355 None:intergenic 20.0%
!! CAAACTCGTATAAAATAATT+CGG - tig0026659:34337-34356 None:intergenic 20.0%
!!! TTATTTTATACGAGTTTGAA+AGG + tig0026659:34339-34358 Msa1430460:CDS 20.0%
!!! TATTTTATACGAGTTTGAAA+GGG + tig0026659:34340-34359 Msa1430460:CDS 20.0%
!!! TTTTTAAGGTTACATGTTTT+TGG - tig0026659:33406-33425 None:intergenic 20.0%
!!! TTGAAACAGATAGATTTTTA+AGG - tig0026659:33420-33439 None:intergenic 20.0%
!! GATAGTAAACAATTCAAAAA+TGG - tig0026659:33653-33672 None:intergenic 20.0%
!! AACTATTAAATCAAGAGAAT+GGG - tig0026659:34025-34044 None:intergenic 20.0%
!! AAACTCGTATAAAATAATTC+GGG - tig0026659:34336-34355 None:intergenic 20.0%
!! CAAACTCGTATAAAATAATT+CGG - tig0026659:34337-34356 None:intergenic 20.0%
!!! TTATTTTATACGAGTTTGAA+AGG + tig0026659:34339-34358 Msa1430460:CDS 20.0%
!!! TATTTTATACGAGTTTGAAA+GGG + tig0026659:34340-34359 Msa1430460:CDS 20.0%
!! TTAATCGGAAGAAAATGTTT+TGG - tig0026659:33553-33572 None:intergenic 25.0%
!!! CATTTGGACAGAATTTTAAT+CGG - tig0026659:33568-33587 None:intergenic 25.0%
! TTAAAATTCTGTCCAAATGT+AGG + tig0026659:33569-33588 Msa1430460:CDS 25.0%
! TAAAATTCTGTCCAAATGTA+GGG + tig0026659:33570-33589 Msa1430460:CDS 25.0%
! GTAAACAATTCAAAAATGGA+TGG - tig0026659:33649-33668 None:intergenic 25.0%
! CAACTATTAAATCAAGAGAA+TGG - tig0026659:34026-34045 None:intergenic 25.0%
! TCATTCCTCTCAATTTATTT+GGG - tig0026659:34302-34321 None:intergenic 25.0%
! ATCATTCCTCTCAATTTATT+TGG - tig0026659:34303-34322 None:intergenic 25.0%
! AACTCGTATAAAATAATTCG+GGG - tig0026659:34335-34354 None:intergenic 25.0%
!!! TTTTAGCCTTACAAGATAAA+TGG + tig0026659:34430-34449 Msa1430460:CDS 25.0%
! ATAATCAATATCACTGTCAT+CGG - tig0026659:34553-34572 None:intergenic 25.0%
! TTCAAAGATGATTATGATGA+TGG + tig0026659:34597-34616 Msa1430460:CDS 25.0%
!! TTTTCCAATTCAAAATGGTT+CGG + tig0026659:34722-34741 Msa1430460:CDS 25.0%
!! TTAATCGGAAGAAAATGTTT+TGG - tig0026659:33553-33572 None:intergenic 25.0%
!!! CATTTGGACAGAATTTTAAT+CGG - tig0026659:33568-33587 None:intergenic 25.0%
! TTAAAATTCTGTCCAAATGT+AGG + tig0026659:33569-33588 Msa1430460:CDS 25.0%
! TAAAATTCTGTCCAAATGTA+GGG + tig0026659:33570-33589 Msa1430460:CDS 25.0%
! GTAAACAATTCAAAAATGGA+TGG - tig0026659:33649-33668 None:intergenic 25.0%
! CAACTATTAAATCAAGAGAA+TGG - tig0026659:34026-34045 None:intergenic 25.0%
! TCATTCCTCTCAATTTATTT+GGG - tig0026659:34302-34321 None:intergenic 25.0%
! ATCATTCCTCTCAATTTATT+TGG - tig0026659:34303-34322 None:intergenic 25.0%
! AACTCGTATAAAATAATTCG+GGG - tig0026659:34335-34354 None:intergenic 25.0%
!!! TTTTAGCCTTACAAGATAAA+TGG + tig0026659:34430-34449 Msa1430460:CDS 25.0%
! ATAATCAATATCACTGTCAT+CGG - tig0026659:34553-34572 None:intergenic 25.0%
! TTCAAAGATGATTATGATGA+TGG + tig0026659:34597-34616 Msa1430460:CDS 25.0%
!! TTTTCCAATTCAAAATGGTT+CGG + tig0026659:34722-34741 Msa1430460:CDS 25.0%
CTATTCACAGAAAAAGATGA+AGG - tig0026659:33379-33398 None:intergenic 30.0%
! TTTTCAGCTTTTGAACAAAC+CGG - tig0026659:33513-33532 None:intergenic 30.0%
TTGAATTGTTTACTATCCCA+TGG + tig0026659:33656-33675 Msa1430460:CDS 30.0%
ATCGTCTATTTCAACAGTAT+TGG + tig0026659:33777-33796 Msa1430460:CDS 30.0%
TCAATGATCTTGAATTTGTC+TGG - tig0026659:33928-33947 None:intergenic 30.0%
ATTGTTTGAACTTCAAAGGT+CGG - tig0026659:34050-34069 None:intergenic 30.0%
CTCAATTGTTTGAACTTCAA+AGG - tig0026659:34054-34073 None:intergenic 30.0%
AAACAATTGAGACTTCGAAA+GGG + tig0026659:34063-34082 Msa1430460:CDS 30.0%
TTGGAATGACAATTGAAAAG+AGG + tig0026659:34232-34251 Msa1430460:CDS 30.0%
GCTAGGATTGATAAAGAATT+TGG + tig0026659:34501-34520 Msa1430460:CDS 30.0%
TAATCAATATCACTGTCATC+GGG - tig0026659:34552-34571 None:intergenic 30.0%
!!! TGATTATGATGATGGTTTTG+AGG + tig0026659:34605-34624 Msa1430460:CDS 30.0%
TGAGGATATATTTGAAGACT+TGG + tig0026659:34623-34642 Msa1430460:CDS 30.0%
! GATTTGTTTGACAACAAGAT+TGG + tig0026659:34678-34697 Msa1430460:CDS 30.0%
! ACAACAAGATTGGAGAATTT+TGG + tig0026659:34688-34707 Msa1430460:CDS 30.0%
! GAACCATTTTGAATTGGAAA+AGG - tig0026659:34723-34742 None:intergenic 30.0%
CTATTCACAGAAAAAGATGA+AGG - tig0026659:33379-33398 None:intergenic 30.0%
! TTTTCAGCTTTTGAACAAAC+CGG - tig0026659:33513-33532 None:intergenic 30.0%
TTGAATTGTTTACTATCCCA+TGG + tig0026659:33656-33675 Msa1430460:CDS 30.0%
ATCGTCTATTTCAACAGTAT+TGG + tig0026659:33777-33796 Msa1430460:CDS 30.0%
TCAATGATCTTGAATTTGTC+TGG - tig0026659:33928-33947 None:intergenic 30.0%
ATTGTTTGAACTTCAAAGGT+CGG - tig0026659:34050-34069 None:intergenic 30.0%
CTCAATTGTTTGAACTTCAA+AGG - tig0026659:34054-34073 None:intergenic 30.0%
AAACAATTGAGACTTCGAAA+GGG + tig0026659:34063-34082 Msa1430460:CDS 30.0%
TTGGAATGACAATTGAAAAG+AGG + tig0026659:34232-34251 Msa1430460:CDS 30.0%
GCTAGGATTGATAAAGAATT+TGG + tig0026659:34501-34520 Msa1430460:CDS 30.0%
TAATCAATATCACTGTCATC+GGG - tig0026659:34552-34571 None:intergenic 30.0%
!!! TGATTATGATGATGGTTTTG+AGG + tig0026659:34605-34624 Msa1430460:CDS 30.0%
TGAGGATATATTTGAAGACT+TGG + tig0026659:34623-34642 Msa1430460:CDS 30.0%
! GATTTGTTTGACAACAAGAT+TGG + tig0026659:34678-34697 Msa1430460:CDS 30.0%
! ACAACAAGATTGGAGAATTT+TGG + tig0026659:34688-34707 Msa1430460:CDS 30.0%
! GAACCATTTTGAATTGGAAA+AGG - tig0026659:34723-34742 None:intergenic 30.0%
! TATTGCTGACTAAGAAAGGA+TGG - tig0026659:33309-33328 None:intergenic 35.0%
CCTTTCTTAGTCAGCAATAA+CGG + tig0026659:33310-33329 Msa1430460:CDS 35.0%
TGAAAGATAAGCCCTACATT+TGG - tig0026659:33584-33603 None:intergenic 35.0%
CAAAAATGGATGGATATCGA+TGG - tig0026659:33639-33658 None:intergenic 35.0%
TATAACTTAGTTGCGTTGAG+AGG - tig0026659:33691-33710 None:intergenic 35.0%
! GAGATAGCATAAGAAGCTTT+TGG - tig0026659:33813-33832 None:intergenic 35.0%
! TTCCTCCTAATTTTAGATCC+CGG + tig0026659:33887-33906 Msa1430460:CDS 35.0%
TGATCTTGAATTTGTCTGGA+TGG - tig0026659:33924-33943 None:intergenic 35.0%
AAGATCATTGACACTTCCTA+TGG + tig0026659:33937-33956 Msa1430460:CDS 35.0%
CAAACAATTGAGACTTCGAA+AGG + tig0026659:34062-34081 Msa1430460:CDS 35.0%
AACAATTGAGACTTCGAAAG+GGG + tig0026659:34064-34083 Msa1430460:CDS 35.0%
GAAAGGGGCTTAATTTAAAG+AGG + tig0026659:34079-34098 Msa1430460:CDS 35.0%
TTAATTTAAAGAGGCCTCAC+CGG + tig0026659:34088-34107 Msa1430460:CDS 35.0%
CAAACTTTAGCAAGTAATCC+CGG - tig0026659:34110-34129 None:intergenic 35.0%
! TTCTGCTTCAATTGATTCCT+TGG - tig0026659:34181-34200 None:intergenic 35.0%
! ATGTTGTGCTGTTATAAGAG+AGG + tig0026659:34206-34225 Msa1430460:CDS 35.0%
!! TCCAAACTCCTTTCTGAAAT+GGG - tig0026659:34277-34296 None:intergenic 35.0%
AATTGAGAGGAATGATTGTG+AGG + tig0026659:34307-34326 Msa1430460:CDS 35.0%
TGATGAGAAGGGTAACTTAT+TGG + tig0026659:34395-34414 Msa1430460:CDS 35.0%
TAACTTATTGGAGAAGGATG+AGG + tig0026659:34407-34426 Msa1430460:CDS 35.0%
AGCCTTACAAGATAAATGGA+TGG + tig0026659:34434-34453 Msa1430460:CDS 35.0%
GTCCATCCATTTATCTTGTA+AGG - tig0026659:34439-34458 None:intergenic 35.0%
! ACAAGATAAATGGATGGACT+TGG + tig0026659:34440-34459 Msa1430460:CDS 35.0%
GGATTGATAAAGAATTTGGC+AGG + tig0026659:34505-34524 Msa1430460:CDS 35.0%
! GGACCTTTTCCAATTCAAAA+TGG + tig0026659:34717-34736 Msa1430460:CDS 35.0%
! CTATCCGAACCATTTTGAAT+TGG - tig0026659:34729-34748 None:intergenic 35.0%
! TATTGCTGACTAAGAAAGGA+TGG - tig0026659:33309-33328 None:intergenic 35.0%
CCTTTCTTAGTCAGCAATAA+CGG + tig0026659:33310-33329 Msa1430460:CDS 35.0%
TGAAAGATAAGCCCTACATT+TGG - tig0026659:33584-33603 None:intergenic 35.0%
CAAAAATGGATGGATATCGA+TGG - tig0026659:33639-33658 None:intergenic 35.0%
TATAACTTAGTTGCGTTGAG+AGG - tig0026659:33691-33710 None:intergenic 35.0%
! GAGATAGCATAAGAAGCTTT+TGG - tig0026659:33813-33832 None:intergenic 35.0%
! TTCCTCCTAATTTTAGATCC+CGG + tig0026659:33887-33906 Msa1430460:CDS 35.0%
TGATCTTGAATTTGTCTGGA+TGG - tig0026659:33924-33943 None:intergenic 35.0%
AAGATCATTGACACTTCCTA+TGG + tig0026659:33937-33956 Msa1430460:CDS 35.0%
CAAACAATTGAGACTTCGAA+AGG + tig0026659:34062-34081 Msa1430460:CDS 35.0%
AACAATTGAGACTTCGAAAG+GGG + tig0026659:34064-34083 Msa1430460:CDS 35.0%
GAAAGGGGCTTAATTTAAAG+AGG + tig0026659:34079-34098 Msa1430460:CDS 35.0%
TTAATTTAAAGAGGCCTCAC+CGG + tig0026659:34088-34107 Msa1430460:CDS 35.0%
CAAACTTTAGCAAGTAATCC+CGG - tig0026659:34110-34129 None:intergenic 35.0%
! TTCTGCTTCAATTGATTCCT+TGG - tig0026659:34181-34200 None:intergenic 35.0%
! ATGTTGTGCTGTTATAAGAG+AGG + tig0026659:34206-34225 Msa1430460:CDS 35.0%
!! TCCAAACTCCTTTCTGAAAT+GGG - tig0026659:34277-34296 None:intergenic 35.0%
AATTGAGAGGAATGATTGTG+AGG + tig0026659:34307-34326 Msa1430460:CDS 35.0%
TGATGAGAAGGGTAACTTAT+TGG + tig0026659:34395-34414 Msa1430460:CDS 35.0%
TAACTTATTGGAGAAGGATG+AGG + tig0026659:34407-34426 Msa1430460:CDS 35.0%
AGCCTTACAAGATAAATGGA+TGG + tig0026659:34434-34453 Msa1430460:CDS 35.0%
GTCCATCCATTTATCTTGTA+AGG - tig0026659:34439-34458 None:intergenic 35.0%
! ACAAGATAAATGGATGGACT+TGG + tig0026659:34440-34459 Msa1430460:CDS 35.0%
GGATTGATAAAGAATTTGGC+AGG + tig0026659:34505-34524 Msa1430460:CDS 35.0%
! GGACCTTTTCCAATTCAAAA+TGG + tig0026659:34717-34736 Msa1430460:CDS 35.0%
! CTATCCGAACCATTTTGAAT+TGG - tig0026659:34729-34748 None:intergenic 35.0%
! CCGTTATTGCTGACTAAGAA+AGG - tig0026659:33313-33332 None:intergenic 40.0%
ACGAAGAAAAGTGGAACTGA+GGG - tig0026659:33347-33366 None:intergenic 40.0%
TGTTGTTCCACGAAGAAAAG+TGG - tig0026659:33356-33375 None:intergenic 40.0%
TTGTCATGAGGAACAGAATC+CGG + tig0026659:33491-33510 Msa1430460:CDS 40.0%
ATCATAGACAGTAAGGAACG+AGG - tig0026659:33616-33635 None:intergenic 40.0%
TCGATGGATCATAGACAGTA+AGG - tig0026659:33623-33642 None:intergenic 40.0%
GTCAAACGAACACATAGTTG+AGG - tig0026659:33715-33734 None:intergenic 40.0%
! AACCGGGATCTAAAATTAGG+AGG - tig0026659:33892-33911 None:intergenic 40.0%
! CACAACCGGGATCTAAAATT+AGG - tig0026659:33895-33914 None:intergenic 40.0%
TAATTTAAAGAGGCCTCACC+GGG + tig0026659:34089-34108 Msa1430460:CDS 40.0%
! TTGTTATAAGGGCACACTTC+TGG - tig0026659:34141-34160 None:intergenic 40.0%
TCTCAGCAGGGTTGTTATAA+GGG - tig0026659:34152-34171 None:intergenic 40.0%
GCTGTTATAAGAGAGGTTCT+TGG + tig0026659:34213-34232 Msa1430460:CDS 40.0%
ACCCATTTCAGAAAGGAGTT+TGG + tig0026659:34273-34292 Msa1430460:CDS 40.0%
! GTCCAAACTCCTTTCTGAAA+TGG - tig0026659:34278-34297 None:intergenic 40.0%
GGACTCCCAAATAAATTGAG+AGG + tig0026659:34294-34313 Msa1430460:CDS 40.0%
ATACGAGTTTGAAAGGGCAA+AGG + tig0026659:34346-34365 Msa1430460:CDS 40.0%
TACGAGTTTGAAAGGGCAAA+GGG + tig0026659:34347-34366 Msa1430460:CDS 40.0%
TCTCATCAAATCGCTCTACT+AGG - tig0026659:34383-34402 None:intergenic 40.0%
AGTAGAGCGATTTGATGAGA+AGG + tig0026659:34383-34402 Msa1430460:CDS 40.0%
GTAGAGCGATTTGATGAGAA+GGG + tig0026659:34384-34403 Msa1430460:CDS 40.0%
GAAGGGTAACTTATTGGAGA+AGG + tig0026659:34401-34420 Msa1430460:CDS 40.0%
TCTCTCTCTTCTCATTCTCT+TGG - tig0026659:34475-34494 None:intergenic 40.0%
AGAGAATGAGAAGAGAGAGA+AGG + tig0026659:34475-34494 Msa1430460:CDS 40.0%
AATGAGAAGAGAGAGAAGGA+AGG + tig0026659:34479-34498 Msa1430460:CDS 40.0%
!!! AGACTTGGATTTTGAAGCTG+AGG + tig0026659:34638-34657 Msa1430460:CDS 40.0%
TGTCAAACAAATCGTTTCCC+AGG - tig0026659:34671-34690 None:intergenic 40.0%
! ATTGGAGAATTTTGGACTGC+AGG + tig0026659:34696-34715 Msa1430460:CDS 40.0%
! CCGTTATTGCTGACTAAGAA+AGG - tig0026659:33313-33332 None:intergenic 40.0%
ACGAAGAAAAGTGGAACTGA+GGG - tig0026659:33347-33366 None:intergenic 40.0%
TGTTGTTCCACGAAGAAAAG+TGG - tig0026659:33356-33375 None:intergenic 40.0%
TTGTCATGAGGAACAGAATC+CGG + tig0026659:33491-33510 Msa1430460:CDS 40.0%
ATCATAGACAGTAAGGAACG+AGG - tig0026659:33616-33635 None:intergenic 40.0%
TCGATGGATCATAGACAGTA+AGG - tig0026659:33623-33642 None:intergenic 40.0%
GTCAAACGAACACATAGTTG+AGG - tig0026659:33715-33734 None:intergenic 40.0%
! AACCGGGATCTAAAATTAGG+AGG - tig0026659:33892-33911 None:intergenic 40.0%
! CACAACCGGGATCTAAAATT+AGG - tig0026659:33895-33914 None:intergenic 40.0%
TAATTTAAAGAGGCCTCACC+GGG + tig0026659:34089-34108 Msa1430460:CDS 40.0%
! TTGTTATAAGGGCACACTTC+TGG - tig0026659:34141-34160 None:intergenic 40.0%
TCTCAGCAGGGTTGTTATAA+GGG - tig0026659:34152-34171 None:intergenic 40.0%
GCTGTTATAAGAGAGGTTCT+TGG + tig0026659:34213-34232 Msa1430460:CDS 40.0%
ACCCATTTCAGAAAGGAGTT+TGG + tig0026659:34273-34292 Msa1430460:CDS 40.0%
! GTCCAAACTCCTTTCTGAAA+TGG - tig0026659:34278-34297 None:intergenic 40.0%
GGACTCCCAAATAAATTGAG+AGG + tig0026659:34294-34313 Msa1430460:CDS 40.0%
ATACGAGTTTGAAAGGGCAA+AGG + tig0026659:34346-34365 Msa1430460:CDS 40.0%
TACGAGTTTGAAAGGGCAAA+GGG + tig0026659:34347-34366 Msa1430460:CDS 40.0%
TCTCATCAAATCGCTCTACT+AGG - tig0026659:34383-34402 None:intergenic 40.0%
AGTAGAGCGATTTGATGAGA+AGG + tig0026659:34383-34402 Msa1430460:CDS 40.0%
GTAGAGCGATTTGATGAGAA+GGG + tig0026659:34384-34403 Msa1430460:CDS 40.0%
GAAGGGTAACTTATTGGAGA+AGG + tig0026659:34401-34420 Msa1430460:CDS 40.0%
TCTCTCTCTTCTCATTCTCT+TGG - tig0026659:34475-34494 None:intergenic 40.0%
AGAGAATGAGAAGAGAGAGA+AGG + tig0026659:34475-34494 Msa1430460:CDS 40.0%
AATGAGAAGAGAGAGAAGGA+AGG + tig0026659:34479-34498 Msa1430460:CDS 40.0%
!!! AGACTTGGATTTTGAAGCTG+AGG + tig0026659:34638-34657 Msa1430460:CDS 40.0%
TGTCAAACAAATCGTTTCCC+AGG - tig0026659:34671-34690 None:intergenic 40.0%
! ATTGGAGAATTTTGGACTGC+AGG + tig0026659:34696-34715 Msa1430460:CDS 40.0%
!! CTTAGTCAGCAATAACGGAC+CGG + tig0026659:33315-33334 Msa1430460:CDS 45.0%
GTGGAACTGAGGGAATTTAC+CGG - tig0026659:33337-33356 None:intergenic 45.0%
CACGAAGAAAAGTGGAACTG+AGG - tig0026659:33348-33367 None:intergenic 45.0%
!! CTCAGTTCCACTTTTCTTCG+TGG + tig0026659:33346-33365 Msa1430460:CDS 45.0%
TTGACAGGCATGTTGTCATG+AGG + tig0026659:33479-33498 Msa1430460:CDS 45.0%
! TTAGTTGCGTTGAGAGGTGT+GGG - tig0026659:33685-33704 None:intergenic 45.0%
CAATTCCTCAACTGCAAGTG+CGG - tig0026659:33749-33768 None:intergenic 45.0%
CCAACTTTGCCAGTAGTAAC+CGG - tig0026659:33843-33862 None:intergenic 45.0%
TTAGGAGGAAGACCAAGATC+AGG - tig0026659:33877-33896 None:intergenic 45.0%
TGTATCGTGCGATACCAACT+TGG + tig0026659:33975-33994 Msa1430460:CDS 45.0%
AGGTAAAGGCTTTGCCAAGT+TGG - tig0026659:33992-34011 None:intergenic 45.0%
TTTAGCAAGTAATCCCGGTG+AGG - tig0026659:34105-34124 None:intergenic 45.0%
CTCTCAGCAGGGTTGTTATA+AGG - tig0026659:34153-34172 None:intergenic 45.0%
TAACAACCCTGCTGAGAGTT+TGG + tig0026659:34155-34174 Msa1430460:CDS 45.0%
!! CCTTTCTGAAATGGGTCAAG+TGG - tig0026659:34269-34288 None:intergenic 45.0%
CCACTTGACCCATTTCAGAA+AGG + tig0026659:34266-34285 Msa1430460:CDS 45.0%
TTTGAAAGGGCAAAGGGACT+CGG + tig0026659:34353-34372 Msa1430460:CDS 45.0%
! ATAAATGGATGGACTTGGCG+AGG + tig0026659:34445-34464 Msa1430460:CDS 45.0%
! TAAATGGATGGACTTGGCGA+GGG + tig0026659:34446-34465 Msa1430460:CDS 45.0%
TGAAGCTGAGGATTATGACC+TGG + tig0026659:34650-34669 Msa1430460:CDS 45.0%
GAAGCTGAGGATTATGACCT+GGG + tig0026659:34651-34670 Msa1430460:CDS 45.0%
ATAGAGAACAGAAGCAACCC+TGG + tig0026659:34745-34764 Msa1430460:CDS 45.0%
!! CTTAGTCAGCAATAACGGAC+CGG + tig0026659:33315-33334 Msa1430460:CDS 45.0%
GTGGAACTGAGGGAATTTAC+CGG - tig0026659:33337-33356 None:intergenic 45.0%
CACGAAGAAAAGTGGAACTG+AGG - tig0026659:33348-33367 None:intergenic 45.0%
!! CTCAGTTCCACTTTTCTTCG+TGG + tig0026659:33346-33365 Msa1430460:CDS 45.0%
TTGACAGGCATGTTGTCATG+AGG + tig0026659:33479-33498 Msa1430460:CDS 45.0%
! TTAGTTGCGTTGAGAGGTGT+GGG - tig0026659:33685-33704 None:intergenic 45.0%
CAATTCCTCAACTGCAAGTG+CGG - tig0026659:33749-33768 None:intergenic 45.0%
CCAACTTTGCCAGTAGTAAC+CGG - tig0026659:33843-33862 None:intergenic 45.0%
TTAGGAGGAAGACCAAGATC+AGG - tig0026659:33877-33896 None:intergenic 45.0%
TGTATCGTGCGATACCAACT+TGG + tig0026659:33975-33994 Msa1430460:CDS 45.0%
AGGTAAAGGCTTTGCCAAGT+TGG - tig0026659:33992-34011 None:intergenic 45.0%
TTTAGCAAGTAATCCCGGTG+AGG - tig0026659:34105-34124 None:intergenic 45.0%
CTCTCAGCAGGGTTGTTATA+AGG - tig0026659:34153-34172 None:intergenic 45.0%
TAACAACCCTGCTGAGAGTT+TGG + tig0026659:34155-34174 Msa1430460:CDS 45.0%
!! CCTTTCTGAAATGGGTCAAG+TGG - tig0026659:34269-34288 None:intergenic 45.0%
CCACTTGACCCATTTCAGAA+AGG + tig0026659:34266-34285 Msa1430460:CDS 45.0%
TTTGAAAGGGCAAAGGGACT+CGG + tig0026659:34353-34372 Msa1430460:CDS 45.0%
! ATAAATGGATGGACTTGGCG+AGG + tig0026659:34445-34464 Msa1430460:CDS 45.0%
! TAAATGGATGGACTTGGCGA+GGG + tig0026659:34446-34465 Msa1430460:CDS 45.0%
TGAAGCTGAGGATTATGACC+TGG + tig0026659:34650-34669 Msa1430460:CDS 45.0%
GAAGCTGAGGATTATGACCT+GGG + tig0026659:34651-34670 Msa1430460:CDS 45.0%
ATAGAGAACAGAAGCAACCC+TGG + tig0026659:34745-34764 Msa1430460:CDS 45.0%
CAACATGCCTGTCAAGAGTG+CGG - tig0026659:33474-33493 None:intergenic 50.0%
CTTAGTTGCGTTGAGAGGTG+TGG - tig0026659:33686-33705 None:intergenic 50.0%
TTATGCTATCTCCTCACCGC+CGG + tig0026659:33821-33840 Msa1430460:CDS 50.0%
ACTTTGCCAGTAGTAACCGG+CGG - tig0026659:33840-33859 None:intergenic 50.0%
CCGGTTACTACTGGCAAAGT+TGG + tig0026659:33840-33859 Msa1430460:CDS 50.0%
GTTCACCTTGCTCCTGATCT+TGG + tig0026659:33862-33881 Msa1430460:CDS 50.0%
GAAGACCAAGATCAGGAGCA+AGG - tig0026659:33870-33889 None:intergenic 50.0%
TGGATGGTCATTGCACAACC+GGG - tig0026659:33908-33927 None:intergenic 50.0%
CTGGATGGTCATTGCACAAC+CGG - tig0026659:33909-33928 None:intergenic 50.0%
AAGCTCAAGTGCACGTCCAT+AGG - tig0026659:33956-33975 None:intergenic 50.0%
TCAAGAGAATGGGACTCACG+CGG - tig0026659:34015-34034 None:intergenic 50.0%
GAAGAGAGAGAAGGAAGGCT+AGG + tig0026659:34484-34503 Msa1430460:CDS 50.0%
CAACATGCCTGTCAAGAGTG+CGG - tig0026659:33474-33493 None:intergenic 50.0%
CTTAGTTGCGTTGAGAGGTG+TGG - tig0026659:33686-33705 None:intergenic 50.0%
TTATGCTATCTCCTCACCGC+CGG + tig0026659:33821-33840 Msa1430460:CDS 50.0%
ACTTTGCCAGTAGTAACCGG+CGG - tig0026659:33840-33859 None:intergenic 50.0%
CCGGTTACTACTGGCAAAGT+TGG + tig0026659:33840-33859 Msa1430460:CDS 50.0%
GTTCACCTTGCTCCTGATCT+TGG + tig0026659:33862-33881 Msa1430460:CDS 50.0%
GAAGACCAAGATCAGGAGCA+AGG - tig0026659:33870-33889 None:intergenic 50.0%
TGGATGGTCATTGCACAACC+GGG - tig0026659:33908-33927 None:intergenic 50.0%
CTGGATGGTCATTGCACAAC+CGG - tig0026659:33909-33928 None:intergenic 50.0%
AAGCTCAAGTGCACGTCCAT+AGG - tig0026659:33956-33975 None:intergenic 50.0%
TCAAGAGAATGGGACTCACG+CGG - tig0026659:34015-34034 None:intergenic 50.0%
GAAGAGAGAGAAGGAAGGCT+AGG + tig0026659:34484-34503 Msa1430460:CDS 50.0%
CCTTGGCCAAACTCTCAGCA+GGG - tig0026659:34164-34183 None:intergenic 55.0%
TCCTTGGCCAAACTCTCAGC+AGG - tig0026659:34165-34184 None:intergenic 55.0%
CCTTGGCCAAACTCTCAGCA+GGG - tig0026659:34164-34183 None:intergenic 55.0%
TCCTTGGCCAAACTCTCAGC+AGG - tig0026659:34165-34184 None:intergenic 55.0%
TTCGCGACCGCACTCTTGAC+AGG + tig0026659:33464-33483 Msa1430460:CDS 60.0%
! TGAGAGGTGTGGGTGGCCAT+GGG - tig0026659:33675-33694 None:intergenic 60.0%
! TTGAGAGGTGTGGGTGGCCA+TGG - tig0026659:33676-33695 None:intergenic 60.0%
! GTTGCGTTGAGAGGTGTGGG+TGG - tig0026659:33682-33701 None:intergenic 60.0%
TGCAGCCGCACTTGCAGTTG+AGG + tig0026659:33741-33760 Msa1430460:CDS 60.0%
! TCCTCACCGCCGGTTACTAC+TGG + tig0026659:33831-33850 Msa1430460:CDS 60.0%
TGGGACTCACGCGGAGGTAA+AGG - tig0026659:34006-34025 None:intergenic 60.0%
AGAGAATGGGACTCACGCGG+AGG - tig0026659:34012-34031 None:intergenic 60.0%
CCCTGCTGAGAGTTTGGCCA+AGG + tig0026659:34161-34180 Msa1430460:CDS 60.0%
TTCGCGACCGCACTCTTGAC+AGG + tig0026659:33464-33483 Msa1430460:CDS 60.0%
! TGAGAGGTGTGGGTGGCCAT+GGG - tig0026659:33675-33694 None:intergenic 60.0%
! TTGAGAGGTGTGGGTGGCCA+TGG - tig0026659:33676-33695 None:intergenic 60.0%
! GTTGCGTTGAGAGGTGTGGG+TGG - tig0026659:33682-33701 None:intergenic 60.0%
TGCAGCCGCACTTGCAGTTG+AGG + tig0026659:33741-33760 Msa1430460:CDS 60.0%
! TCCTCACCGCCGGTTACTAC+TGG + tig0026659:33831-33850 Msa1430460:CDS 60.0%
TGGGACTCACGCGGAGGTAA+AGG - tig0026659:34006-34025 None:intergenic 60.0%
AGAGAATGGGACTCACGCGG+AGG - tig0026659:34012-34031 None:intergenic 60.0%
CCCTGCTGAGAGTTTGGCCA+AGG + tig0026659:34161-34180 Msa1430460:CDS 60.0%
ACTGCAAGTGCGGCTGCAGC+TGG - tig0026659:33739-33758 None:intergenic 65.0%
GCCAGTAGTAACCGGCGGTG+AGG - tig0026659:33835-33854 None:intergenic 65.0%
ACTGCAAGTGCGGCTGCAGC+TGG - tig0026659:33739-33758 None:intergenic 65.0%
GCCAGTAGTAACCGGCGGTG+AGG - tig0026659:33835-33854 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0026659 gene 33295 34770 33295 ID=Msa1430460;Name=Msa1430460
tig0026659 mRNA 33295 34770 33295 ID=Msa1430460-mRNA-1;Parent=Msa1430460;Name=Msa1430460-mRNA-1;_AED=0.18;_eAED=0.19;_QI=0|-1|0|1|-1|1|1|0|491
tig0026659 exon 33295 34770 33295 ID=Msa1430460-mRNA-1:exon:7005;Parent=Msa1430460-mRNA-1
tig0026659 CDS 33295 34770 33295 ID=Msa1430460-mRNA-1:cds;Parent=Msa1430460-mRNA-1
Gene Sequence

>Msa1430460

ATGGCATTGTGCCATCCTTTCTTAGTCAGCAATAACGGACCGGTAAATTCCCTCAGTTCCACTTTTCTTCGTGGAACAACACCTTCATCTTTTTCTGTGAATAGAAAACCAAAAACATGTAACCTTAAAAATCTATCTGTTTCAATTAGTTGTTCGTCTCTTAAAACTGTTCGCGACCGCACTCTTGACAGGCATGTTGTCATGAGGAACAGAATCCGGTTTGTTCAAAAGCTGAAAACTTTGCTTCTTTCTAAACCAAAACATTTTCTTCCGATTAAAATTCTGTCCAAATGTAGGGCTTATCTTTCACTTCATAAGCCTCGTTCCTTACTGTCTATGATCCATCGATATCCATCCATTTTTGAATTGTTTACTATCCCATGGCCACCCACACCTCTCAACGCAACTAAGTTATATCCTCAACTATGTGTTCGTTTGACTCCAGCTGCAGCCGCACTTGCAGTTGAGGAATTGAATCTTAAATCGTCTATTTCAACAGTATTGGCAAACAAACTCCAAAAGCTTCTTATGCTATCTCCTCACCGCCGGTTACTACTGGCAAAGTTGGTTCACCTTGCTCCTGATCTTGGTCTTCCTCCTAATTTTAGATCCCGGTTGTGCAATGACCATCCAGACAAATTCAAGATCATTGACACTTCCTATGGACGTGCACTTGAGCTTGTATCGTGCGATACCAACTTGGCAAAGCCTTTACCTCCGCGTGAGTCCCATTCTCTTGATTTAATAGTTGACCGACCTTTGAAGTTCAAACAATTGAGACTTCGAAAGGGGCTTAATTTAAAGAGGCCTCACCGGGATTACTTGCTAAAGTTTGAAGAAGTGCCAGAAGTGTGCCCTTATAACAACCCTGCTGAGAGTTTGGCCAAGGAATCAATTGAAGCAGAAAAGAGATGTTGTGCTGTTATAAGAGAGGTTCTTGGAATGACAATTGAAAAGAGGACATTAATAGACCACTTGACCCATTTCAGAAAGGAGTTTGGACTCCCAAATAAATTGAGAGGAATGATTGTGAGGCACCCCGAATTATTTTATACGAGTTTGAAAGGGCAAAGGGACTCGGTTTTCCTAGTAGAGCGATTTGATGAGAAGGGTAACTTATTGGAGAAGGATGAGGTTTTAGCCTTACAAGATAAATGGATGGACTTGGCGAGGGAGTCCAAGAGAATGAGAAGAGAGAGAAGGAAGGCTAGGATTGATAAAGAATTTGGCAGGTTGAGTGATGTAAATCAAAATCCCGATGACAGTGATATTGATTATGATGATGATATTGAGATTGATAATTTCAAAGATGATTATGATGATGGTTTTGAGGATATATTTGAAGACTTGGATTTTGAAGCTGAGGATTATGACCTGGGAAACGATTTGTTTGACAACAAGATTGGAGAATTTTGGACTGCAGGACCTTTTCCAATTCAAAATGGTTCGGATAGAGAACAGAAGCAACCCTGGTAA

Protein sequence

>Msa1430460

MALCHPFLVSNNGPVNSLSSTFLRGTTPSSFSVNRKPKTCNLKNLSVSISCSSLKTVRDRTLDRHVVMRNRIRFVQKLKTLLLSKPKHFLPIKILSKCRAYLSLHKPRSLLSMIHRYPSIFELFTIPWPPTPLNATKLYPQLCVRLTPAAAALAVEELNLKSSISTVLANKLQKLLMLSPHRRLLLAKLVHLAPDLGLPPNFRSRLCNDHPDKFKIIDTSYGRALELVSCDTNLAKPLPPRESHSLDLIVDRPLKFKQLRLRKGLNLKRPHRDYLLKFEEVPEVCPYNNPAESLAKESIEAEKRCCAVIREVLGMTIEKRTLIDHLTHFRKEFGLPNKLRGMIVRHPELFYTSLKGQRDSVFLVERFDEKGNLLEKDEVLALQDKWMDLARESKRMRRERRKARIDKEFGRLSDVNQNPDDSDIDYDDDIEIDNFKDDYDDGFEDIFEDLDFEAEDYDLGNDLFDNKIGEFWTAGPFPIQNGSDREQKQPW*