AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1225240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1225240 MtrunA17_Chr3g0130991 89.651 744 11 3 1 744 1 678 0.0 1320
Msa1225240 MtrunA17_Chr7g0216911 47.265 713 287 8 41 739 34 671 0.0 611
Msa1225240 MtrunA17_Chr1g0173551 27.116 579 337 21 33 583 29 550 4.89e-35 142
Msa1225240 MtrunA17_Chr4g0040791 36.398 261 130 8 82 316 55 305 9.96e-34 137
Msa1225240 MtrunA17_Chr2g0296761 92.453 53 4 0 333 385 43 95 2.92e-28 110
Msa1225240 MtrunA17_Chr2g0311931 41.667 144 71 2 83 213 18 161 7.05e-23 104
Msa1225240 MtrunA17_Chr2g0311941 41.667 144 71 2 83 213 18 161 8.83e-23 104
Msa1225240 MtrunA17_Chr4g0066951 37.989 179 90 5 65 232 1 169 9.03e-23 104
Msa1225240 MtrunA17_Chr1g0170011 41.667 144 71 2 83 213 18 161 9.63e-23 103
Msa1225240 MtrunA17_Chr7g0231931 37.805 164 92 3 68 225 46 205 3.44e-22 102
Msa1225240 MtrunA17_Chr2g0286711 33.714 175 106 3 67 235 38 208 2.71e-17 86.3
Msa1225240 MtrunA17_Chr4g0065151 29.767 215 130 5 85 285 140 347 2.84e-17 86.7
Msa1225240 MtrunA17_Chr4g0056591 34.426 183 98 4 38 217 61 224 1.68e-16 84.0
Msa1225240 MtrunA17_Chr2g0312621 27.679 224 138 6 87 302 499 706 5.79e-14 75.9
Msa1225240 MtrunA17_Chr4g0005781 26.838 272 142 9 86 308 9 272 4.30e-13 72.0
Msa1225240 MtrunA17_Chr1g0204031 27.715 267 142 10 86 308 9 268 4.91e-13 72.8
Msa1225240 MtrunA17_Chr1g0193591 27.331 311 172 11 86 350 9 311 6.27e-13 71.6
Msa1225240 MtrunA17_Chr1g0200071 26.838 272 142 9 86 308 9 272 1.10e-12 70.9
Msa1225240 MtrunA17_Chr1g0200091 26.838 272 142 9 86 308 9 272 1.10e-12 70.9
Msa1225240 MtrunA17_Chr1g0200121 26.471 272 143 9 86 308 9 272 1.61e-12 70.5
Msa1225240 MtrunA17_Chr6g0458111 26.471 272 143 9 86 308 9 272 2.99e-12 69.7
Msa1225240 MtrunA17_Chr6g0458091 26.471 272 143 9 86 308 9 272 2.99e-12 69.7
Msa1225240 MtrunA17_Chr7g0259481 27.888 251 136 9 86 306 65 300 6.81e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1225240 AT5G08650.1 75.533 703 102 3 47 744 44 681 0.0 1064
Msa1225240 AT5G08650.2 73.934 633 95 3 47 674 44 611 0.0 950
Msa1225240 AT5G39900.1 46.784 684 291 5 63 739 45 662 0.0 602
Msa1225240 AT5G13650.1 27.318 604 325 24 19 583 22 550 4.02e-33 136
Msa1225240 AT5G13650.2 27.747 537 285 20 83 583 82 551 1.88e-32 134
Msa1225240 AT2G31060.2 36.437 247 122 8 82 302 57 294 2.88e-32 134
Msa1225240 AT2G31060.3 35.628 247 128 6 82 302 57 298 1.68e-31 131
Msa1225240 AT3G22980.1 33.198 247 133 8 84 317 9 236 7.92e-25 111
Msa1225240 AT3G22980.3 33.198 247 133 8 84 317 9 236 7.92e-25 111
Msa1225240 AT3G22980.2 33.198 247 133 8 84 317 9 236 7.92e-25 111
Msa1225240 AT1G45332.1 37.423 163 92 2 69 225 50 208 5.92e-23 105
Msa1225240 AT2G45030.1 37.195 164 93 2 68 225 49 208 8.03e-23 104
Msa1225240 AT1G56070.3 41.667 144 71 2 83 213 18 161 1.65e-22 103
Msa1225240 AT1G56070.2 41.667 144 71 2 83 213 18 161 1.65e-22 103
Msa1225240 AT1G56070.1 41.667 144 71 2 83 213 18 161 1.65e-22 103
Msa1225240 AT3G12915.2 40.278 144 73 2 83 213 18 161 7.00e-22 101
Msa1225240 AT1G06220.1 36.496 137 78 3 84 213 138 272 3.44e-18 90.1
Msa1225240 AT1G06220.3 36.496 137 78 3 84 213 138 272 3.44e-18 90.1
Msa1225240 AT1G06220.2 36.496 137 78 3 84 213 138 272 3.44e-18 90.1
Msa1225240 AT5G25230.2 35.036 137 80 3 84 213 124 258 7.45e-17 85.9
Msa1225240 AT5G25230.1 35.036 137 80 3 84 213 124 258 7.45e-17 85.9
Msa1225240 AT1G62750.1 37.324 142 82 2 79 217 91 228 1.46e-15 81.3
Msa1225240 AT1G17220.1 28.125 224 137 6 87 302 504 711 2.59e-13 74.3
Msa1225240 AT1G07920.1 27.206 272 141 9 86 308 9 272 5.39e-13 72.4
Msa1225240 AT1G07940.4 27.206 272 141 9 86 308 9 272 5.39e-13 72.4
Msa1225240 AT1G07940.1 27.206 272 141 9 86 308 9 272 5.39e-13 72.4
Msa1225240 AT1G07940.2 27.206 272 141 9 86 308 9 272 5.39e-13 72.4
Msa1225240 AT1G07940.3 27.206 272 141 9 86 308 9 272 5.39e-13 72.4
Msa1225240 AT5G60390.3 27.206 272 141 9 86 308 9 272 5.39e-13 72.4
Msa1225240 AT5G60390.1 27.206 272 141 9 86 308 9 272 5.39e-13 72.4
Msa1225240 AT5G60390.2 27.206 272 141 9 86 308 9 272 5.39e-13 72.4
Msa1225240 AT1G07930.1 27.206 272 141 9 86 308 9 272 5.39e-13 72.4

Find 198 sgRNAs with CRISPR-Local

Find 815 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGAAAAGGTTGAAATATT+TGG 0.112179 8_1:-90570507 Msa1225240:three_prime_UTR
TGAAATTTATGAGTGAAATT+AGG 0.157682 8_1:-90575177 Msa1225240:CDS
TGTGCCTCAAGAAGCCTTTA+TGG 0.188228 8_1:-90570877 Msa1225240:CDS
AGCGGACGCAATAAAATATA+TGG 0.221777 8_1:+90570701 None:intergenic
CCCATAGCACTAGAGGTTTC+AGG 0.226483 8_1:+90575917 None:intergenic
CCTTACTTCTTGACTTTAAC+TGG 0.235768 8_1:+90574987 None:intergenic
AAAATAAATGTGATACTATA+AGG 0.243785 8_1:+90570732 None:intergenic
TTAGCGCATATACAACATTT+TGG 0.247706 8_1:-90570559 Msa1225240:three_prime_UTR
AATTGTCTGCCTTTCTAAAA+TGG 0.255201 8_1:+90576612 None:intergenic
CTCTTCAGCTTGAAGTTGAT+TGG 0.263414 8_1:+90578199 None:intergenic
GGACTATATTGGCCCGCTTA+TGG 0.284113 8_1:-90575236 Msa1225240:CDS
CTGCTCAATTGTAAATATAT+CGG 0.287100 8_1:-90570636 Msa1225240:three_prime_UTR
TCTATCAAATTTAAGCAATA+TGG 0.289257 8_1:+90581517 None:intergenic
ACCTCTAGTGCTATGGGATT+TGG 0.294827 8_1:-90575911 Msa1225240:CDS
GAAATTTATGAGTGAAATTA+GGG 0.299417 8_1:-90575176 Msa1225240:CDS
AAGAATCTAGTGGCGGTTAT+TGG 0.301356 8_1:+90582175 None:intergenic
GATACAGTAGTATTCTATTC+TGG 0.303033 8_1:-90582291 Msa1225240:five_prime_UTR
ATATTCGATCTTACTTGAAT+TGG 0.309319 8_1:+90572354 None:intergenic
ATCGATTTCTTGTAGGTTAT+AGG 0.316784 8_1:-90579349 Msa1225240:intron
ATCCAGATGTTGTATTTAAT+AGG 0.320892 8_1:-90572890 Msa1225240:CDS
TTTGAACAAAATAGATCTTC+CGG 0.321275 8_1:-90579769 Msa1225240:CDS
AAACTCGACATACAGATAAA+TGG 0.324873 8_1:-90574273 Msa1225240:CDS
TACTTACAGGGATAATTTCT+AGG 0.326195 8_1:+90580194 None:intergenic
TCTCCACATGGAAATTGTTC+AGG 0.328537 8_1:-90575864 Msa1225240:intron
AGCTAATGTTTATTTAGCTT+TGG 0.336647 8_1:-90580224 Msa1225240:CDS
GATAAGTTGCTTCAGGTTAC+TGG 0.340265 8_1:-90581950 Msa1225240:CDS
TAAGAATCATTGATTACATT+TGG 0.340292 8_1:+90570579 None:intergenic
AGTATGGAGTATACTGTTAC+TGG 0.343985 8_1:-90574956 Msa1225240:CDS
AGGCATCACTATTAAGCTTC+AGG 0.352747 8_1:-90581864 Msa1225240:intron
CACTTGGAGCAGTAGTTATC+AGG 0.354666 8_1:+90575660 None:intergenic
GTGAATCTTTATCTGCAATA+AGG 0.359560 8_1:-90571566 Msa1225240:CDS
AAGTAAGGGTTACGCTAGTA+TGG 0.360998 8_1:-90574972 Msa1225240:CDS
TATACAATAACACCTCTATA+TGG 0.365664 8_1:+90578531 None:intergenic
TGAGGGCTTTAATATTTGAT+AGG 0.368431 8_1:-90579093 Msa1225240:intron
TAACTTTCTTTGACCTGAAA+AGG 0.374442 8_1:-90570520 Msa1225240:three_prime_UTR
CAAGCTGAAGAGTTGTTTGC+TGG 0.377791 8_1:-90578188 Msa1225240:CDS
CCAGTTAAAGTCAAGAAGTA+AGG 0.378124 8_1:-90574987 Msa1225240:CDS
CTATTCATGGGTGGAGCAAT+AGG 0.378354 8_1:+90573025 None:intergenic
TGCCTATTAAATACAACATC+TGG 0.380582 8_1:+90572888 None:intergenic
AAAGAAACTGCTTAAGAAAC+AGG 0.387323 8_1:-90571114 Msa1225240:intron
GTAGGAAGGAATAGGTATAA+TGG 0.389777 8_1:-90579176 Msa1225240:intron
GGGAAAGGTGAAGCGAGGTT+TGG 0.390729 8_1:+90582141 None:intergenic
AAGTTTCAGAACTGCCATAA+AGG 0.395396 8_1:+90570863 None:intergenic
TCTTCAGCTTGAAGTTGATT+GGG 0.400766 8_1:+90578200 None:intergenic
GTTAGCGGATAAGTTGCTTC+AGG 0.401598 8_1:-90581957 Msa1225240:CDS
AATTGAGGAGCCAGTTGTTA+AGG 0.403978 8_1:-90575409 Msa1225240:intron
CTTACGCCAAAGGACTATAT+TGG 0.407701 8_1:-90575247 Msa1225240:CDS
ATTACTTTGATACCTATTCA+TGG 0.414352 8_1:+90573012 None:intergenic
CAATACTGGTCAGCATCAAT+AGG 0.417543 8_1:+90576539 None:intergenic
TGGCCAGGATCGTCTCTCTA+AGG 0.420695 8_1:-90582041 Msa1225240:CDS
ACTTGTCTTACCGTAGCATT+TGG 0.420848 8_1:+90571530 None:intergenic
TATTGGCCCGCTTATGGAAC+TGG 0.421847 8_1:-90575230 Msa1225240:CDS
GTATACTTCCGAGTTGTAGA+TGG 0.425229 8_1:-90578513 Msa1225240:CDS
AAGAAGAGAATGAAATCAAT+TGG 0.431528 8_1:-90570909 Msa1225240:CDS
TGCTCAATTGTAAATATATC+GGG 0.435094 8_1:-90570635 Msa1225240:three_prime_UTR
GGCTTTGACTCTAAAGTTGA+AGG 0.436187 8_1:-90572406 Msa1225240:CDS
CAATTCACTCCCTGGATATG+AGG 0.440586 8_1:-90576594 Msa1225240:CDS
ATCTCCTTGAGAACCCGATC+TGG 0.443039 8_1:+90579738 None:intergenic
CTGGTTACACACAAATTCAA+TGG 0.443119 8_1:-90582272 Msa1225240:exon
CCTTGTAGTAGATGCTTCTC+AGG 0.443587 8_1:-90580398 Msa1225240:intron
CTATTGCTCCACCCATGAAT+AGG 0.444299 8_1:-90573024 Msa1225240:intron
CAAGTAATAACCTTAACAAC+TGG 0.444946 8_1:+90575399 None:intergenic
CCAGGCTCAGGAAGTAAAGA+TGG 0.447470 8_1:+90575444 None:intergenic
CTCAAGTGCATCTCGTAGCT+CGG 0.449950 8_1:+90576402 None:intergenic
TCCGCTGATTTCCTACTTCG+TGG 0.451852 8_1:-90570684 Msa1225240:three_prime_UTR
CCATAGCACTAGAGGTTTCA+GGG 0.455605 8_1:+90575918 None:intergenic
CAGGTCAAAGAAAGTTAATG+AGG 0.456099 8_1:+90570526 None:intergenic
TTGAACAAAATAGATCTTCC+GGG 0.456126 8_1:-90579768 Msa1225240:CDS
CCCTGAAACCTCTAGTGCTA+TGG 0.456349 8_1:-90575918 Msa1225240:CDS
GGCTTCTTTGATGTATCAGC+AGG 0.459380 8_1:+90579118 None:intergenic
TTCTTTGATGTATCAGCAGG+TGG 0.461919 8_1:+90579121 None:intergenic
AAATAAATGTGATACTATAA+GGG 0.463947 8_1:+90570733 None:intergenic
GGTCAGCATCAATAGGAAAC+AGG 0.466497 8_1:+90576546 None:intergenic
CTCAGCTAGAGGTAATTCAT+AGG 0.468778 8_1:+90575144 None:intergenic
AGCGGGCCAATATAGTCCTT+TGG 0.470781 8_1:+90575241 None:intergenic
CGATCACTCGCTGCGTGTGA+GGG 0.471197 8_1:-90580427 Msa1225240:CDS
TTCAGGCGTATTCTGTGGGA+AGG 0.475490 8_1:-90572428 Msa1225240:intron
GGCAGTTCTGAAACTTGAAA+AGG 0.475513 8_1:-90570856 Msa1225240:CDS
TCCGGGTGCAGAACCAGATC+GGG 0.476926 8_1:-90579751 Msa1225240:CDS
TTGGTGTTCGTTGAGAATGA+TGG 0.479388 8_1:+90582194 None:intergenic
GGCATTATATACTTATATGC+TGG 0.479706 8_1:-90576347 Msa1225240:CDS
GAAGACGGAGGAGTTGCGGC+GGG 0.479873 8_1:+90582120 None:intergenic
CTCCGCCGCTAAAGATGGCC+AGG 0.482586 8_1:-90582056 Msa1225240:CDS
GGAGTGGCTTCCTCATATCC+AGG 0.483279 8_1:+90576584 None:intergenic
GGAGGAGTTGCGGCGGGGAA+AGG 0.485091 8_1:+90582126 None:intergenic
TCTTTGATGTATCAGCAGGT+GGG 0.493416 8_1:+90579122 None:intergenic
ATGTAAGTTGCAGCATTGTT+TGG 0.496029 8_1:-90570812 Msa1225240:three_prime_UTR
ACCCGATCTGGTTCTGCACC+CGG 0.496958 8_1:+90579750 None:intergenic
TACAGAGTGAACTGTGCTAA+TGG 0.501582 8_1:-90575632 Msa1225240:CDS
TAGGAGAAGTCGACATGTCC+AGG 0.501752 8_1:+90581490 None:intergenic
GCGGACGCAATAAAATATAT+GGG 0.501821 8_1:+90570702 None:intergenic
ATGGTCAATATGAGCAATGA+TGG 0.502363 8_1:+90581991 None:intergenic
TTCGACTCCGCCGCTAAAGA+TGG 0.504916 8_1:-90582061 Msa1225240:CDS
TCAAGTGCATCTCGTAGCTC+GGG 0.505743 8_1:+90576403 None:intergenic
CCATCTTTACTTCCTGAGCC+TGG 0.509619 8_1:-90575444 Msa1225240:CDS
TTGTTTCAGGCATTTGGCAA+GGG 0.510289 8_1:-90576309 Msa1225240:CDS
TTAAATTTGATAGATACTCC+TGG 0.511830 8_1:-90581508 Msa1225240:CDS
TCGATCACTCGCTGCGTGTG+AGG 0.516111 8_1:-90580428 Msa1225240:CDS
CCGCTGATTTCCTACTTCGT+GGG 0.518127 8_1:-90570683 Msa1225240:three_prime_UTR
CTTTGATGTATCAGCAGGTG+GGG 0.519149 8_1:+90579123 None:intergenic
CCTGAAACCTCTAGTGCTAT+GGG 0.519933 8_1:-90575917 Msa1225240:CDS
TTACTTTGATACCTATTCAT+GGG 0.525034 8_1:+90573013 None:intergenic
TACGATTGTGCACAGAGATA+AGG 0.526136 8_1:-90574229 Msa1225240:intron
CTTGAGCCAGTTCCATAAGC+GGG 0.528427 8_1:+90575224 None:intergenic
GTAGATGGCACTATAAAGAA+AGG 0.534101 8_1:-90578498 Msa1225240:CDS
TTCCGGGTGCAGAACCAGAT+CGG 0.535834 8_1:-90579752 Msa1225240:CDS
TGGCCACGGAACTTTGTGGC+GGG 0.536343 8_1:-90582252 Msa1225240:CDS
CGCCATTCTCTGCTCTGCAA+AGG 0.537529 8_1:-90579311 Msa1225240:intron
GGTGATCGTGTCACCCACTC+TGG 0.540513 8_1:+90576637 None:intergenic
TCAATGGCCACGGAACTTTG+TGG 0.542424 8_1:-90582256 Msa1225240:CDS
GAAGTTAGAGACGGTGTCGT+TGG 0.543041 8_1:+90582081 None:intergenic
TTTGTTTCAGGCATTTGGCA+AGG 0.546219 8_1:-90576310 Msa1225240:CDS
TGAAGAGTTGTTTGCTGGTG+AGG 0.550458 8_1:-90578183 Msa1225240:intron
GACCTTTGCAGAGCAGAGAA+TGG 0.551059 8_1:+90579309 None:intergenic
ATATGAGGAAGCCACTCCTA+TGG 0.551847 8_1:-90576579 Msa1225240:CDS
TTCACTCTGTATACAACACT+TGG 0.553233 8_1:+90575644 None:intergenic
ACTCAATGATGCTGCACTGA+AGG 0.553647 8_1:-90576371 Msa1225240:CDS
ATGTTGTTGCTCCGTTCAAG+AGG 0.555432 8_1:-90573057 Msa1225240:CDS
ATGGGATTTGGCTTTAGATG+TGG 0.557566 8_1:-90575899 Msa1225240:CDS
AAGGCAGACAATTCACTCCC+TGG 0.559485 8_1:-90576602 Msa1225240:CDS
GGAACAGTTTCTTGATAACA+TGG 0.559591 8_1:-90581903 Msa1225240:CDS
TCTTATCCGTTAAAACTCAA+CGG 0.560116 8_1:-90582222 Msa1225240:CDS
ATCATTGCTCATATTGACCA+TGG 0.561701 8_1:-90581989 Msa1225240:CDS
CCTGAGAAGCATCTACTACA+AGG 0.562576 8_1:+90580398 None:intergenic
TGTCTGCCTTTCTAAAATGG+TGG 0.565594 8_1:+90576615 None:intergenic
GAACCTTAGAGAGACGATCC+TGG 0.569180 8_1:+90582038 None:intergenic
TGTTTCAGGCATTTGGCAAG+GGG 0.569310 8_1:-90576308 Msa1225240:CDS
GGCAGAAGACGGAGGAGTTG+CGG 0.569400 8_1:+90582116 None:intergenic
TCTTTCTCCAACCAGGCTGA+AGG 0.569872 8_1:-90570933 Msa1225240:intron
GCCAAATCCCATAGCACTAG+AGG 0.572351 8_1:+90575910 None:intergenic
TTTGATGTATCAGCAGGTGG+GGG 0.575416 8_1:+90579124 None:intergenic
GATTGAGATGCTTACGCCAA+AGG 0.577796 8_1:-90575257 Msa1225240:CDS
GATGTATTAGCCAAATGCTA+CGG 0.578352 8_1:-90571540 Msa1225240:intron
CCGCTAACGTGGACTTCCCA+TGG 0.579778 8_1:+90581972 None:intergenic
TGGTGAATGTGTGGAGCCAT+TGG 0.579848 8_1:-90574253 Msa1225240:CDS
CCATGGGAAGTCCACGTTAG+CGG 0.579853 8_1:-90581972 Msa1225240:CDS
AGAACCAGATCGGGTTCTCA+AGG 0.582020 8_1:-90579742 Msa1225240:CDS
TGTGCCGCAGAGAGAAATGA+AGG 0.582275 8_1:-90581924 Msa1225240:CDS
CTTTGATACCTATTCATGGG+TGG 0.583789 8_1:+90573016 None:intergenic
AGACAAAACTCCAATTTCAT+CGG 0.583933 8_1:+90578223 None:intergenic
TGAAGTAAAAGTGGGTCCCA+TGG 0.584652 8_1:-90582340 Msa1225240:five_prime_UTR
GTCTGCCTTTCTAAAATGGT+GGG 0.586047 8_1:+90576616 None:intergenic
TCAGGCGTATTCTGTGGGAA+GGG 0.587286 8_1:-90572427 Msa1225240:intron
AGTAGCAACACGGCAGAAGA+CGG 0.589541 8_1:+90582105 None:intergenic
ACGATCCTGGCCATCTTTAG+CGG 0.589639 8_1:+90582051 None:intergenic
ACACACAAATTCAATGGCCA+CGG 0.590067 8_1:-90582266 Msa1225240:exon
ATGGCCACGGAACTTTGTGG+CGG 0.591029 8_1:-90582253 Msa1225240:CDS
CAGTTAAAGTCAAGAAGTAA+GGG 0.592105 8_1:-90574986 Msa1225240:CDS
AGTTACTACGATCCATATAG+AGG 0.594152 8_1:-90578543 Msa1225240:CDS
CTGTGCACAATCGTAGCCAA+TGG 0.596094 8_1:+90574237 None:intergenic
TCTTGAGCCAGTTCCATAAG+CGG 0.597601 8_1:+90575223 None:intergenic
CAATGATGCTGCACTGAAGG+TGG 0.597770 8_1:-90576368 Msa1225240:CDS
ATATCAATCTTGTAGATGGT+TGG 0.601743 8_1:-90575022 Msa1225240:intron
CAATCAAATACCTCAGCTAG+AGG 0.604831 8_1:+90575133 None:intergenic
TGGTAAAAGAAGATCAATTG+AGG 0.606356 8_1:-90575424 Msa1225240:CDS
GGAATTAACGACCTCTTGAA+CGG 0.608823 8_1:+90573046 None:intergenic
AGAAGACGGAGGAGTTGCGG+CGG 0.611060 8_1:+90582119 None:intergenic
GCCACTCCTATGGTGTTCTG+TGG 0.611338 8_1:-90576569 Msa1225240:CDS
TCATTGCTCATATTGACCAT+GGG 0.617524 8_1:-90581988 Msa1225240:CDS
AAGTTTCGTATATTCGACAC+TGG 0.618050 8_1:+90582016 None:intergenic
AACAGTAGCTGATGCCAGAG+TGG 0.619766 8_1:-90576651 Msa1225240:CDS
GGTTCTCAAGGAGATTGAAG+AGG 0.620796 8_1:-90579730 Msa1225240:intron
AGTTCTGAAACTTGAAAAGG+AGG 0.625258 8_1:-90570853 Msa1225240:CDS
TCTCTGTTCTAGGCATGCAT+AGG 0.625781 8_1:-90571606 Msa1225240:intron
CGGCGGGGAAAGGTGAAGCG+AGG 0.625953 8_1:+90582136 None:intergenic
TGTTCCTTCATTTCTCTCTG+CGG 0.630453 8_1:+90581920 None:intergenic
GTATGGAGTATACTGTTACT+GGG 0.633312 8_1:-90574955 Msa1225240:intron
ACAGTAGCTGATGCCAGAGT+GGG 0.633916 8_1:-90576650 Msa1225240:CDS
GGTGAAGCGAGGTTTGGACG+AGG 0.635609 8_1:+90582147 None:intergenic
TACATCAAAGAAGCCACTGA+GGG 0.635885 8_1:-90579110 Msa1225240:CDS
ATAACGAGTTAACACTTACA+TGG 0.636652 8_1:+90570484 None:intergenic
TACTATAAGGGATTCATCTG+AGG 0.638159 8_1:+90570745 None:intergenic
AGTTGAAGGAGCTCATACCA+CGG 0.644576 8_1:-90572392 Msa1225240:CDS
ACAGATAAATGGTGAATGTG+TGG 0.651598 8_1:-90574262 Msa1225240:CDS
CGAGGAATTGAAGAATCTAG+TGG 0.652147 8_1:+90582165 None:intergenic
GAGTGGCTTCCTCATATCCA+GGG 0.652988 8_1:+90576585 None:intergenic
AACTGGCTCAAGAAAGAAGA+GGG 0.654742 8_1:-90575213 Msa1225240:CDS
AAGCAACTTATCCGCTAACG+TGG 0.656024 8_1:+90581961 None:intergenic
TTATAGTGCCATCTACAACT+CGG 0.656148 8_1:+90578505 None:intergenic
AACAGGCCACAGAACACCAT+AGG 0.656760 8_1:+90576563 None:intergenic
CTATGAATTACCTCTAGCTG+AGG 0.659779 8_1:-90575143 Msa1225240:intron
GCCACAGAACACCATAGGAG+TGG 0.663182 8_1:+90576568 None:intergenic
ACTACATTCACATACCTCGT+AGG 0.670548 8_1:+90581471 None:intergenic
GGCGGAGTCGAAGTTAGAGA+CGG 0.676078 8_1:+90582072 None:intergenic
AGCAACACGGCAGAAGACGG+AGG 0.679564 8_1:+90582108 None:intergenic
ATCCTGGCCATCTTTAGCGG+CGG 0.686494 8_1:+90582054 None:intergenic
ATACATCAAAGAAGCCACTG+AGG 0.687721 8_1:-90579111 Msa1225240:CDS
GAACTGGCTCAAGAAAGAAG+AGG 0.687782 8_1:-90575214 Msa1225240:CDS
TCAAATATTAAAGCCCTCAG+TGG 0.688316 8_1:+90579097 None:intergenic
TGACCCGCCACAAAGTTCCG+TGG 0.699206 8_1:+90582249 None:intergenic
AAACCTGAACAATTTCCATG+TGG 0.707465 8_1:+90575861 None:intergenic
GGAATTGAAGAATCTAGTGG+CGG 0.708068 8_1:+90582168 None:intergenic
ACTGCCATAAAGGCTTCTTG+AGG 0.710112 8_1:+90570873 None:intergenic
CCCACGAAGTAGGAAATCAG+CGG 0.721638 8_1:+90570683 None:intergenic
AAGACGGAGGAGTTGCGGCG+GGG 0.741144 8_1:+90582121 None:intergenic
ATGGATTTAGAGAGAGAACG+AGG 0.743032 8_1:-90581884 Msa1225240:CDS
TGTCGTTGGTAGTAGCAACA+CGG 0.750658 8_1:+90582095 None:intergenic
ACATGTCGACTTCTCCTACG+AGG 0.757753 8_1:-90581485 Msa1225240:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CACAATATTTATAAATTAAT+AGG + chr8_1:90577512-90577531 None:intergenic 10.0%
!!! AGTTTTATTTATATTGTAAT+AGG + chr8_1:90578703-90578722 None:intergenic 10.0%
!!! TTTTATTTAAAAGTTATAGA+GGG - chr8_1:90579244-90579263 Msa1225240:intron 10.0%
!!! CTATAACTTTTAAAAAAAAA+GGG + chr8_1:90579453-90579472 None:intergenic 10.0%
!!! ACTATAACTTTTAAAAAAAA+AGG + chr8_1:90579454-90579473 None:intergenic 10.0%
!! TAATTCATACTTAAAAAAAA+TGG - chr8_1:90580511-90580530 Msa1225240:intron 10.0%
!! AATTCATACTTAAAAAAAAT+GGG - chr8_1:90580512-90580531 Msa1225240:intron 10.0%
!!! TAAACAAAATTTATTTTAGT+AGG - chr8_1:90580935-90580954 Msa1225240:intron 10.0%
!!! AAACAAAATTTATTTTAGTA+GGG - chr8_1:90580936-90580955 Msa1225240:intron 10.0%
!!! ATAAGTAAATTTTTTTTTGT+AGG - chr8_1:90580968-90580987 Msa1225240:intron 10.0%
!!! TAAGTAAATTTTTTTTTGTA+GGG - chr8_1:90580969-90580988 Msa1225240:intron 10.0%
!! GAATTTAAATTTGTATACAA+TGG - chr8_1:90571217-90571236 Msa1225240:intron 15.0%
!!! ACACTTTTTTTTTGTTATTT+TGG - chr8_1:90572306-90572325 Msa1225240:intron 15.0%
!!! TTTTTTTTTGTTATTTTGGT+CGG - chr8_1:90572310-90572329 Msa1225240:intron 15.0%
!! AAATATGAAAATTAAAACCA+TGG + chr8_1:90572466-90572485 None:intergenic 15.0%
!! TATAATTTATAAACCTAGAA+AGG + chr8_1:90572489-90572508 None:intergenic 15.0%
!! AAAAATTATTTCCAAATAAC+AGG - chr8_1:90572565-90572584 Msa1225240:intron 15.0%
!! AAAATTATTTCCAAATAACA+GGG - chr8_1:90572566-90572585 Msa1225240:intron 15.0%
!! TTCAAAATTCTAATTGATAA+AGG + chr8_1:90572740-90572759 None:intergenic 15.0%
!!! ATGTATTTTTTTAATTACGA+AGG - chr8_1:90572774-90572793 Msa1225240:intron 15.0%
!! TGAATTAAGAATAAAGTAAT+GGG + chr8_1:90573417-90573436 None:intergenic 15.0%
!! ATGAATTAAGAATAAAGTAA+TGG + chr8_1:90573418-90573437 None:intergenic 15.0%
!! TGTAGTTTAATAAGAATATT+AGG + chr8_1:90574577-90574596 None:intergenic 15.0%
!! TAATATTCTTATTAAACTAC+AGG - chr8_1:90574576-90574595 Msa1225240:intron 15.0%
!! ACTAAATATCTCTTAATATT+TGG + chr8_1:90575721-90575740 None:intergenic 15.0%
!! TACACAATTGAAAAATATAA+AGG + chr8_1:90577309-90577328 None:intergenic 15.0%
!!! TCTTTTCTTTAGTTTATATA+TGG - chr8_1:90578639-90578658 Msa1225240:intron 15.0%
!!! CTTTTAAATAAAAGAAATAC+TGG + chr8_1:90579237-90579256 None:intergenic 15.0%
!!! CTTTTATTTAAAAGTTATAG+AGG - chr8_1:90579243-90579262 Msa1225240:intron 15.0%
!! TTTATTTAAAAGTTATAGAG+GGG - chr8_1:90579245-90579264 Msa1225240:intron 15.0%
!! AATGCTATTAAAATTAAGTA+AGG + chr8_1:90580998-90581017 None:intergenic 15.0%
!! AAGCATAAATTAAACAAATT+TGG + chr8_1:90580658-90580677 None:intergenic 15.0%
!!! AATTTTTGCGATATTTTTTT+CGG + chr8_1:90580742-90580761 None:intergenic 15.0%
!! AGATATAAGTAACAAAAATA+TGG + chr8_1:90580777-90580796 None:intergenic 15.0%
!! GTTAAAAATTTAAGAGTTTA+AGG - chr8_1:90580907-90580926 Msa1225240:intron 15.0%
!! AATGCTATTAAAATTAAGTA+AGG - chr8_1:90580998-90581017 Msa1225240:intron 15.0%
!!! GGATTTTTTTTAAAATAAGT+TGG + chr8_1:90581371-90581390 None:intergenic 15.0%
!! TAAATAGTAAATACATACAT+GGG + chr8_1:90581440-90581459 None:intergenic 15.0%
!!! TAAAAAAGTACTTATATGAA+GGG - chr8_1:90581529-90581548 Msa1225240:CDS 15.0%
!! ATGTATCTGTAAATAAATAT+GGG - chr8_1:90581556-90581575 Msa1225240:intron 15.0%
!! CATAATGAATATAAGTTAAA+AGG + chr8_1:90581610-90581629 None:intergenic 15.0%
!! AAATAAATGTGATACTATAA+GGG + chr8_1:90582101-90582120 None:intergenic 15.0%
!! AAAATAAATGTGATACTATA+AGG + chr8_1:90582102-90582121 None:intergenic 15.0%
!!! TTTACTTCATTTTTGGATAT+TGG + chr8_1:90570480-90570499 None:intergenic 20.0%
!! TTTAAATTTGTATACAATGG+TGG - chr8_1:90571220-90571239 Msa1225240:intron 20.0%
!! TCTATCAAATTTAAGCAATA+TGG + chr8_1:90571317-90571336 None:intergenic 20.0%
!! TTGAAAATAAATTGTTGTGT+TGG - chr8_1:90571766-90571785 Msa1225240:intron 20.0%
!!! TAACAAAAAAAAAGTGTTCT+TGG + chr8_1:90572303-90572322 None:intergenic 20.0%
!!! AATTTTCATATTTCCTTTCT+AGG - chr8_1:90572473-90572492 Msa1225240:intron 20.0%
!! TTATAACTTCTATGATATGA+TGG - chr8_1:90572504-90572523 Msa1225240:intron 20.0%
!! AAATTATTTCCAAATAACAG+GGG - chr8_1:90572567-90572586 Msa1225240:intron 20.0%
!! TCTAATTGATAAAGGATAAT+GGG + chr8_1:90572732-90572751 None:intergenic 20.0%
!! TTCTAATTGATAAAGGATAA+TGG + chr8_1:90572733-90572752 None:intergenic 20.0%
!! TTGAGATATTATAAGTGTAT+AGG - chr8_1:90572994-90573013 Msa1225240:intron 20.0%
!! TTGAATGTTACACAAATAAT+TGG + chr8_1:90573276-90573295 None:intergenic 20.0%
!! CAATTACTATGAATTAATCT+TGG + chr8_1:90573318-90573337 None:intergenic 20.0%
!! CAAGATTAATTCATAGTAAT+TGG - chr8_1:90573316-90573335 Msa1225240:intron 20.0%
!!! ATGAAATTACTTTCTTTTGT+AGG - chr8_1:90573637-90573656 Msa1225240:intron 20.0%
!! TAAAGAATGAAATTATGAAC+AGG + chr8_1:90574481-90574500 None:intergenic 20.0%
!! GTTGTATGGAAAATAATAAT+AGG - chr8_1:90575439-90575458 Msa1225240:CDS 20.0%
!!! TACTAATTTTACTTTCTTGT+TGG + chr8_1:90575475-90575494 None:intergenic 20.0%
!!! TAAAATTAGTATTGAAGAGA+TGG - chr8_1:90575484-90575503 Msa1225240:intron 20.0%
!!! AAAATTAGTATTGAAGAGAT+GGG - chr8_1:90575485-90575504 Msa1225240:intron 20.0%
!! AAGAGATATTTAGTAGTAAA+TGG - chr8_1:90575727-90575746 Msa1225240:intron 20.0%
!! CAAAAAAAATTGATTAACTC+CGG + chr8_1:90576391-90576410 None:intergenic 20.0%
!! TGAAATTTATGAGTGAAATT+AGG - chr8_1:90577654-90577673 Msa1225240:intron 20.0%
!! GAAATTTATGAGTGAAATTA+GGG - chr8_1:90577655-90577674 Msa1225240:intron 20.0%
!! ACTTAAAATTCCTAAACTAT+AGG + chr8_1:90578031-90578050 None:intergenic 20.0%
!! AAGTATAATGCACTTTAAAT+TGG + chr8_1:90578391-90578410 None:intergenic 20.0%
!! ATTGAATGTATTCATTCAAT+CGG - chr8_1:90578777-90578796 Msa1225240:intron 20.0%
!!! TTTTATCTGAAAGAAAATTC+TGG - chr8_1:90578806-90578825 Msa1225240:intron 20.0%
!! ATTATATGAAGTAAACTTGA+AGG - chr8_1:90578909-90578928 Msa1225240:intron 20.0%
!! TTATATGAAGTAAACTTGAA+GGG - chr8_1:90578910-90578929 Msa1225240:intron 20.0%
!! TAAAATCTTGTGTAAAAAAC+AGG - chr8_1:90579347-90579366 Msa1225240:intron 20.0%
!! AAAATCTTGTGTAAAAAACA+GGG - chr8_1:90579348-90579367 Msa1225240:intron 20.0%
!!! AAACTTTTTTCTTGAAAACT+CGG + chr8_1:90579658-90579677 None:intergenic 20.0%
!! TAGAATTAAATAATTCGAGT+AGG + chr8_1:90580007-90580026 None:intergenic 20.0%
!! ATGAATAAGATACTAATTAC+AGG + chr8_1:90580114-90580133 None:intergenic 20.0%
!!! AAAAGCATAATCATGAAAAT+GGG + chr8_1:90580336-90580355 None:intergenic 20.0%
!!! AAAAAGCATAATCATGAAAA+TGG + chr8_1:90580337-90580356 None:intergenic 20.0%
!! TAAGTATGAATTAATATCCT+AGG + chr8_1:90580504-90580523 None:intergenic 20.0%
!!! AAATGGGTTAATTATGTTTT+TGG - chr8_1:90580528-90580547 Msa1225240:intron 20.0%
!! AAACAAATTTGGATTAAGTA+AGG + chr8_1:90580647-90580666 None:intergenic 20.0%
!!! GTTTTTCAACAATTTTTTAC+AGG - chr8_1:90580688-90580707 Msa1225240:intron 20.0%
!! ATGTTAAGAACGTTATTAAA+AGG - chr8_1:90580712-90580731 Msa1225240:intron 20.0%
!!! TTTTGGGTTAATTATGTTTT+TGG + chr8_1:90581056-90581075 None:intergenic 20.0%
!!! ACCATAGAACAATTTTTTTT+GGG + chr8_1:90581072-90581091 None:intergenic 20.0%
!!! AACCATAGAACAATTTTTTT+TGG + chr8_1:90581073-90581092 None:intergenic 20.0%
!!! ATCTTAAATAATTTTAACCG+TGG - chr8_1:90581339-90581358 Msa1225240:intron 20.0%
!! CTAAATAGTAAATACATACA+TGG + chr8_1:90581441-90581460 None:intergenic 20.0%
!!! CTAAAAAAGTACTTATATGA+AGG - chr8_1:90581528-90581547 Msa1225240:CDS 20.0%
!! GATGTATCTGTAAATAAATA+TGG - chr8_1:90581555-90581574 Msa1225240:intron 20.0%
!! CTGAAGAGAAAATTAAAATA+TGG + chr8_1:90581745-90581764 None:intergenic 20.0%
!!! TAAGAATCATTGATTACATT+TGG + chr8_1:90582255-90582274 None:intergenic 20.0%
!!! TTCATTTTTGGATATTGGAT+TGG + chr8_1:90570475-90570494 None:intergenic 25.0%
! ATCCAAAAATGAAGTAAAAG+TGG - chr8_1:90570482-90570501 Msa1225240:three_prime_UTR 25.0%
! TCCAAAAATGAAGTAAAAGT+GGG - chr8_1:90570483-90570502 Msa1225240:three_prime_UTR 25.0%
! ATAGTGATGAAGATAAGAAA+AGG + chr8_1:90571009-90571028 None:intergenic 25.0%
! ATATATACACGTGAAAATTG+TGG - chr8_1:90571032-90571051 Msa1225240:intron 25.0%
! GTAAATGTTATTAAGAGAGA+TGG - chr8_1:90571147-90571166 Msa1225240:intron 25.0%
!!! TGGATTTTTTTCATTGTGTT+TGG - chr8_1:90571167-90571186 Msa1225240:intron 25.0%
!!! GGATTTTTTTCATTGTGTTT+GGG - chr8_1:90571168-90571187 Msa1225240:intron 25.0%
!!! ATTTTGATTTTGATCATGAC+AGG - chr8_1:90571259-90571278 Msa1225240:intron 25.0%
! TTAAATTTGATAGATACTCC+TGG - chr8_1:90571323-90571342 Msa1225240:intron 25.0%
! CTACATACTCTTATATTCTT+TGG - chr8_1:90571385-90571404 Msa1225240:intron 25.0%
! ATTAGCAACTATTCTAATCA+AGG - chr8_1:90571589-90571608 Msa1225240:CDS 25.0%
!! GAAAAAGTAGTTTTCCAAAA+TGG + chr8_1:90571977-90571996 None:intergenic 25.0%
!!! AAACTACTTTTTCTTTGACA+AGG - chr8_1:90571984-90572003 Msa1225240:intron 25.0%
!!! TACCTTGATAATGTTTTGAT+GGG + chr8_1:90572345-90572364 None:intergenic 25.0%
!!! TTACCTTGATAATGTTTTGA+TGG + chr8_1:90572346-90572365 None:intergenic 25.0%
! AATTATTTCCAAATAACAGG+GGG - chr8_1:90572568-90572587 Msa1225240:intron 25.0%
!! AGCTAATGTTTATTTAGCTT+TGG - chr8_1:90572607-90572626 Msa1225240:intron 25.0%
! AATAAAACAGCATACTTACA+GGG + chr8_1:90572652-90572671 None:intergenic 25.0%
! TAATAAAACAGCATACTTAC+AGG + chr8_1:90572653-90572672 None:intergenic 25.0%
! TTTGAACAAAATAGATCTTC+CGG - chr8_1:90573062-90573081 Msa1225240:CDS 25.0%
! TATGAATTAATCTTGGAAGT+AGG + chr8_1:90573311-90573330 None:intergenic 25.0%
! TTAATTCATAGTAATTGGAG+TGG - chr8_1:90573321-90573340 Msa1225240:intron 25.0%
! ATAATCTGAATTACTTCAAG+TGG + chr8_1:90573585-90573604 None:intergenic 25.0%
!! AATTACTTTCTTTTGTAGGA+AGG - chr8_1:90573641-90573660 Msa1225240:intron 25.0%
! GCTTCATTTCATCATTAAAT+CGG + chr8_1:90573798-90573817 None:intergenic 25.0%
! CAGTATACTATGAATTTACA+CGG - chr8_1:90573828-90573847 Msa1225240:intron 25.0%
! AGACATGGAAATTAAATCAT+TGG + chr8_1:90573973-90573992 None:intergenic 25.0%
! AATCAACTAAACTAAAGTGT+GGG + chr8_1:90574013-90574032 None:intergenic 25.0%
! TAATCAACTAAACTAAAGTG+TGG + chr8_1:90574014-90574033 None:intergenic 25.0%
!!! TAAAATTCCTTTTGTTTGTG+CGG - chr8_1:90574166-90574185 Msa1225240:intron 25.0%
! AACATTATATGAGAAACTGA+AGG + chr8_1:90574251-90574270 None:intergenic 25.0%
! TATACAATAACACCTCTATA+TGG + chr8_1:90574303-90574322 None:intergenic 25.0%
! CTTCTAAATGATTGAATTGA+TGG - chr8_1:90574681-90574700 Msa1225240:intron 25.0%
!! CCTTTATTTCTTGAATTCTT+TGG + chr8_1:90574903-90574922 None:intergenic 25.0%
! CCAAAGAATTCAAGAAATAA+AGG - chr8_1:90574900-90574919 Msa1225240:intron 25.0%
! GAAGAAAATGACTAATGTTA+AGG - chr8_1:90574935-90574954 Msa1225240:intron 25.0%
! AAATGTTTGACAAGATTATG+AGG - chr8_1:90575029-90575048 Msa1225240:intron 25.0%
! ATGAAAAATCATATAAAGCC+TGG - chr8_1:90575096-90575115 Msa1225240:intron 25.0%
! TGAAAAATCATATAAAGCCT+GGG - chr8_1:90575097-90575116 Msa1225240:intron 25.0%
! TAAATGGAAAACCAAAGATA+TGG - chr8_1:90575128-90575147 Msa1225240:intron 25.0%
! AATATTTGTCTCCATATCTT+TGG + chr8_1:90575142-90575161 None:intergenic 25.0%
! AAAGATATGGAGACAAATAT+TGG - chr8_1:90575141-90575160 Msa1225240:intron 25.0%
! ATAGAATGAAAGTTTAGCAA+TGG - chr8_1:90575203-90575222 Msa1225240:CDS 25.0%
! GTATGGAAAATAATAATAGG+TGG - chr8_1:90575442-90575461 Msa1225240:CDS 25.0%
!! ATAAAGTCTTGTCATGTAAT+AGG + chr8_1:90575765-90575784 None:intergenic 25.0%
!!! CTAGATTTTATTTTTCCACA+AGG + chr8_1:90575816-90575835 None:intergenic 25.0%
! TGTGGAAAAATAAAATCTAG+TGG - chr8_1:90575816-90575835 Msa1225240:intron 25.0%
! TGCAAATAAGAAATCAATAC+TGG + chr8_1:90576309-90576328 None:intergenic 25.0%
!!! CGGAGTTAATCAATTTTTTT+TGG - chr8_1:90576389-90576408 Msa1225240:CDS 25.0%
! AAGAAAATTGGATATTTAGG+GGG + chr8_1:90576844-90576863 None:intergenic 25.0%
! CAAGAAAATTGGATATTTAG+GGG + chr8_1:90576845-90576864 None:intergenic 25.0%
! GCAAGAAAATTGGATATTTA+GGG + chr8_1:90576846-90576865 None:intergenic 25.0%
!! CATTGGTATATTTTCTTTTC+CGG - chr8_1:90576877-90576896 Msa1225240:intron 25.0%
! TTTCAAGCACTTTATATTAC+AGG - chr8_1:90577120-90577139 Msa1225240:intron 25.0%
! ATCTACAAGATTGATATTCA+AGG + chr8_1:90577806-90577825 None:intergenic 25.0%
! TTGAATATCAATCTTGTAGA+TGG - chr8_1:90577805-90577824 Msa1225240:intron 25.0%
!! ATGATTTATTGATGATTTGC+TGG - chr8_1:90577916-90577935 Msa1225240:intron 25.0%
! ATAGGAAATACCTATAGTTT+AGG - chr8_1:90578018-90578037 Msa1225240:intron 25.0%
! TTAAACATCTTGAAAATGAG+AGG - chr8_1:90578061-90578080 Msa1225240:intron 25.0%
! GTTTCAATACAGGAATATAT+GGG - chr8_1:90578161-90578180 Msa1225240:intron 25.0%
! TTATAATGTTAAGTGTGAGA+AGG - chr8_1:90578252-90578271 Msa1225240:intron 25.0%
! AGGTATATAAAAAGGTAACA+GGG + chr8_1:90578332-90578351 None:intergenic 25.0%
! AAGGTATATAAAAAGGTAAC+AGG + chr8_1:90578333-90578352 None:intergenic 25.0%
! AGAGTACAAGGTATATAAAA+AGG + chr8_1:90578340-90578359 None:intergenic 25.0%
! AATGCACTTTAAATTGGAAA+AGG + chr8_1:90578385-90578404 None:intergenic 25.0%
! TTATAATGATAAGTGTGAGA+AGG - chr8_1:90578456-90578475 Msa1225240:intron 25.0%
! AAAAATAAAAAATTGCCCCT+CGG - chr8_1:90578670-90578689 Msa1225240:intron 25.0%
! TGAATGAATACATTCAATTC+TGG + chr8_1:90578775-90578794 None:intergenic 25.0%
!! GTTGTAATATTTTCTAATGC+TGG + chr8_1:90578879-90578898 None:intergenic 25.0%
!!! AATGTGGAAAATTTTAATGC+AGG + chr8_1:90578996-90579015 None:intergenic 25.0%
! TTAAACAACCACTCAATAAA+TGG - chr8_1:90579014-90579033 Msa1225240:intron 25.0%
! AAGACTCAAAGGAATATATA+TGG + chr8_1:90579168-90579187 None:intergenic 25.0%
! TTAACAATACAAAGACTCAA+AGG + chr8_1:90579179-90579198 None:intergenic 25.0%
!! ATCAACACTTTTATTCTGAT+GGG + chr8_1:90579756-90579775 None:intergenic 25.0%
! TTACTTTGATACCTATTCAT+GGG + chr8_1:90579821-90579840 None:intergenic 25.0%
! ATTACTTTGATACCTATTCA+TGG + chr8_1:90579822-90579841 None:intergenic 25.0%
! ATCCAGATGTTGTATTTAAT+AGG - chr8_1:90579941-90579960 Msa1225240:intron 25.0%
!!! TCAACTGTTTTGATTACTAA+AGG + chr8_1:90580086-90580105 None:intergenic 25.0%
! AAAGCATAATCATGAAAATG+GGG + chr8_1:90580335-90580354 None:intergenic 25.0%
!!! AACATATGACTTGTATTTTC+AGG - chr8_1:90580386-90580405 Msa1225240:intron 25.0%
! ATATTCGATCTTACTTGAAT+TGG + chr8_1:90580480-90580499 None:intergenic 25.0%
!!! GAGTGCAGAAATTTTTTATA+GGG + chr8_1:90580615-90580634 None:intergenic 25.0%
!!! TGAGTGCAGAAATTTTTTAT+AGG + chr8_1:90580616-90580635 None:intergenic 25.0%
! ACCCAAAAAAAATTGTTCTA+TGG - chr8_1:90581068-90581087 Msa1225240:intron 25.0%
! TAACCACAATAACATATCAT+TGG - chr8_1:90581200-90581219 Msa1225240:intron 25.0%
! ATACCAATGATATGTTATTG+TGG + chr8_1:90581206-90581225 None:intergenic 25.0%
!! AAATAAGTTGGAAATAACCA+CGG + chr8_1:90581359-90581378 None:intergenic 25.0%
! GATAAATAAATCATAGTGAC+AGG + chr8_1:90581392-90581411 None:intergenic 25.0%
! ATCATCAAAACCAAAACAAT+TGG + chr8_1:90581668-90581687 None:intergenic 25.0%
! AAGAAGAGAATGAAATCAAT+TGG - chr8_1:90581922-90581941 Msa1225240:CDS 25.0%
! CTGCTCAATTGTAAATATAT+CGG - chr8_1:90582195-90582214 Msa1225240:CDS 25.0%
! TGCTCAATTGTAAATATATC+GGG - chr8_1:90582196-90582215 Msa1225240:CDS 25.0%
!! ACCCACTTTTACTTCATTTT+TGG + chr8_1:90570487-90570506 None:intergenic 30.0%
! TCATTTCTGTTTTGTCATTG+TGG + chr8_1:90570519-90570538 None:intergenic 30.0%
GATACAGTAGTATTCTATTC+TGG - chr8_1:90570540-90570559 Msa1225240:three_prime_UTR 30.0%
TCTTATCCGTTAAAACTCAA+CGG - chr8_1:90570609-90570628 Msa1225240:three_prime_UTR 30.0%
CAAATTTGACATCAACTGAA+TGG + chr8_1:90571096-90571115 None:intergenic 30.0%
GACTAAATGTAATACAGATG+GGG + chr8_1:90571423-90571442 None:intergenic 30.0%
GGACTAAATGTAATACAGAT+GGG + chr8_1:90571424-90571443 None:intergenic 30.0%
TGGACTAAATGTAATACAGA+TGG + chr8_1:90571425-90571444 None:intergenic 30.0%
! CATTTAGTCCAATAAGCTTT+TGG - chr8_1:90571434-90571453 Msa1225240:intron 30.0%
TTGAATAGAAGATGAAGTAG+TGG - chr8_1:90571538-90571557 Msa1225240:intron 30.0%
TCATTATAGTTCACGCTATT+TGG + chr8_1:90571667-90571686 None:intergenic 30.0%
ATTGCAGTTTGTACAAATTC+CGG + chr8_1:90572066-90572085 None:intergenic 30.0%
!! TTCAAAGCCGTTTTCAATAA+AGG + chr8_1:90572167-90572186 None:intergenic 30.0%
TACATTCCGAACTTACTATT+CGG - chr8_1:90572204-90572223 Msa1225240:intron 30.0%
AATGATTTGACACAGTGAAA+TGG + chr8_1:90572230-90572249 None:intergenic 30.0%
!! CAAAAAAAAAGTGTTCTTGG+TGG + chr8_1:90572300-90572319 None:intergenic 30.0%
TACTTACAGGGATAATTTCT+AGG + chr8_1:90572640-90572659 None:intergenic 30.0%
!!! ACATTACAGGATTTTTTCGT+GGG + chr8_1:90572823-90572842 None:intergenic 30.0%
ACATATGAATTGCACATTAC+AGG + chr8_1:90572836-90572855 None:intergenic 30.0%
AAAACCTGTTACAGAATATC+TGG + chr8_1:90573045-90573064 None:intergenic 30.0%
TTGAACAAAATAGATCTTCC+GGG - chr8_1:90573063-90573082 Msa1225240:CDS 30.0%
! TTAAGAGTATGATGACATCA+AGG + chr8_1:90573145-90573164 None:intergenic 30.0%
!! TGATTTATTTGTTGTTCGAC+TGG - chr8_1:90573238-90573257 Msa1225240:intron 30.0%
! AAGTTGAATCGATTTCTTGT+AGG - chr8_1:90573475-90573494 Msa1225240:intron 30.0%
! ATCGATTTCTTGTAGGTTAT+AGG - chr8_1:90573482-90573501 Msa1225240:intron 30.0%
! TTTCTTTTGTAGGAAGGAAT+AGG - chr8_1:90573647-90573666 Msa1225240:intron 30.0%
! TGAGGGCTTTAATATTTGAT+AGG - chr8_1:90573738-90573757 Msa1225240:intron 30.0%
CATTTCATCATTAAATCGGT+TGG + chr8_1:90573794-90573813 None:intergenic 30.0%
CGTGTAAATTCATAGTATAC+TGG + chr8_1:90573830-90573849 None:intergenic 30.0%
GTCATCCAAATCTTAAACAA+GGG + chr8_1:90573855-90573874 None:intergenic 30.0%
TGTCATCCAAATCTTAAACA+AGG + chr8_1:90573856-90573875 None:intergenic 30.0%
CCAAAATTCTTTCCTAGTAT+CGG + chr8_1:90573879-90573898 None:intergenic 30.0%
!! ATGTGGCAATTTTTAGATCA+AGG + chr8_1:90573908-90573927 None:intergenic 30.0%
TGTACACTTCAGATGATAAT+TGG - chr8_1:90573932-90573951 Msa1225240:intron 30.0%
! TGATTTAATTTCCATGTCTG+AGG - chr8_1:90573974-90573993 Msa1225240:intron 30.0%
TCTTCATAAACTGAAACAGA+AGG + chr8_1:90574084-90574103 None:intergenic 30.0%
GCTGAAACAAAATGTAATGA+AGG + chr8_1:90574201-90574220 None:intergenic 30.0%
!!! AGAGTTTATTTTATGGCTAG+TGG - chr8_1:90574360-90574379 Msa1225240:intron 30.0%
!! TTATTTTATGGCTAGTGGTA+AGG - chr8_1:90574365-90574384 Msa1225240:intron 30.0%
AACTTAATCTTTGGTAGAAG+AGG + chr8_1:90574422-90574441 None:intergenic 30.0%
CTTCTACCAAAGATTAAGTT+TGG - chr8_1:90574422-90574441 Msa1225240:intron 30.0%
TACCAAAGATTAAGTTTGGT+GGG - chr8_1:90574426-90574445 Msa1225240:intron 30.0%
!! GATTATTTTGCCGATGAAAT+TGG - chr8_1:90574598-90574617 Msa1225240:intron 30.0%
AGACAAAACTCCAATTTCAT+CGG + chr8_1:90574611-90574630 None:intergenic 30.0%
AAAACAGTAGTACACATTGT+AGG + chr8_1:90574720-90574739 None:intergenic 30.0%
! ACAATGTGTACTACTGTTTT+TGG - chr8_1:90574720-90574739 Msa1225240:intron 30.0%
! TTCTTGAATTCTTTGGTAGT+AGG + chr8_1:90574896-90574915 None:intergenic 30.0%
! CATCTTATGTCTTTTGATCT+AGG + chr8_1:90575001-90575020 None:intergenic 30.0%
CTAGATCAAAAGACATAAGA+TGG - chr8_1:90574999-90575018 Msa1225240:CDS 30.0%
!! TTCCATTTATTTCTTTTCCC+AGG + chr8_1:90575117-90575136 None:intergenic 30.0%
TGTGACATAGAAATGAAAAC+TGG - chr8_1:90575236-90575255 Msa1225240:CDS 30.0%
TACAATCAAGGTGAATGAAA+TGG - chr8_1:90575336-90575355 Msa1225240:intron 30.0%
AATGAAATGGAGAATGTTTC+AGG - chr8_1:90575349-90575368 Msa1225240:intron 30.0%
ATAAGAACTGCAATGTTGTA+TGG - chr8_1:90575425-90575444 Msa1225240:CDS 30.0%
!!! TCTACAGCATTTTCTAGAAT+TGG + chr8_1:90575590-90575609 None:intergenic 30.0%
TTGAGATGAAGAAAAACCAT+AGG - chr8_1:90575695-90575714 Msa1225240:intron 30.0%
ATCTCTTAATATTTGGCCTA+TGG + chr8_1:90575714-90575733 None:intergenic 30.0%
AGTAGTAAATGGTCTATCTT+TGG - chr8_1:90575738-90575757 Msa1225240:intron 30.0%
ACAATCAATGGAAATGAGAT+GGG + chr8_1:90575877-90575896 None:intergenic 30.0%
!! CAGATAAACGACTTTTAAGT+TGG - chr8_1:90575923-90575942 Msa1225240:CDS 30.0%
! TTTGTCTATGCATGTTTTTC+TGG - chr8_1:90576012-90576031 Msa1225240:intron 30.0%
! AATTGTCTGCCTTTCTAAAA+TGG + chr8_1:90576222-90576241 None:intergenic 30.0%
TTGTTAATCGTTATTGTTGC+CGG - chr8_1:90576369-90576388 Msa1225240:CDS 30.0%
GGCATTATATACTTATATGC+TGG - chr8_1:90576484-90576503 Msa1225240:intron 30.0%
!! AATAGTGCATCTTTTGTTTC+AGG - chr8_1:90576509-90576528 Msa1225240:intron 30.0%
AAGCTAAACAACTTACAGAA+AGG + chr8_1:90576650-90576669 None:intergenic 30.0%
AGAAAATTGGATATTTAGGG+GGG + chr8_1:90576843-90576862 None:intergenic 30.0%
GGCAAGAAAATTGGATATTT+AGG + chr8_1:90576847-90576866 None:intergenic 30.0%
AACATGTAGTATCTACTCTT+TGG - chr8_1:90577004-90577023 Msa1225240:intron 30.0%
! TTGCTTAGTTCTTAGAGATA+AGG - chr8_1:90577058-90577077 Msa1225240:intron 30.0%
TCTGATTAATTTCAGAAACC+TGG - chr8_1:90577089-90577108 Msa1225240:intron 30.0%
ATTACATAGAAAGTGAGCTT+AGG + chr8_1:90577248-90577267 None:intergenic 30.0%
! ATGTGATTTGGACAAAATGA+TGG + chr8_1:90577341-90577360 None:intergenic 30.0%
! TCAATTGATCTTCTTTTACC+AGG + chr8_1:90577408-90577427 None:intergenic 30.0%
TGGTAAAAGAAGATCAATTG+AGG - chr8_1:90577407-90577426 Msa1225240:intron 30.0%
CAAGTAATAACCTTAACAAC+TGG + chr8_1:90577435-90577454 None:intergenic 30.0%
TTGAAAAATTGAAGCAGTTC+AGG - chr8_1:90577481-90577500 Msa1225240:intron 30.0%
ATATCAATCTTGTAGATGGT+TGG - chr8_1:90577809-90577828 Msa1225240:intron 30.0%
CAGTTAAAGTCAAGAAGTAA+GGG - chr8_1:90577845-90577864 Msa1225240:intron 30.0%
TTAATTACGTCTTGCAATCA+TGG + chr8_1:90577976-90577995 None:intergenic 30.0%
! ACTTGAATCTTGGAACATTT+TGG + chr8_1:90578126-90578145 None:intergenic 30.0%
AAATGTTCCAAGATTCAAGT+TGG - chr8_1:90578126-90578145 Msa1225240:intron 30.0%
GGTTTCAATACAGGAATATA+TGG - chr8_1:90578160-90578179 Msa1225240:intron 30.0%
ACTTATGATGACACTTAATG+AGG - chr8_1:90578200-90578219 Msa1225240:CDS 30.0%
! ACAGGGTATCTGAAATAATT+AGG + chr8_1:90578299-90578318 None:intergenic 30.0%
!! GAAAGTATTAGAACATTAGG+AGG + chr8_1:90578499-90578518 None:intergenic 30.0%
!! GCAGAAAGTATTAGAACATT+AGG + chr8_1:90578502-90578521 None:intergenic 30.0%
AAACTCGACATACAGATAAA+TGG - chr8_1:90578558-90578577 Msa1225240:intron 30.0%
AAAATAAAAAATTGCCCCTC+GGG - chr8_1:90578671-90578690 Msa1225240:intron 30.0%
ATATACTAATGTACCATACC+AGG - chr8_1:90578741-90578760 Msa1225240:intron 30.0%
TATTGAGTGGTTGTTTAATG+TGG + chr8_1:90579012-90579031 None:intergenic 30.0%
AAATGTTAGGGGAGATTAAA+CGG + chr8_1:90579048-90579067 None:intergenic 30.0%
GATGGGAAAAAAAATGTTAG+GGG + chr8_1:90579059-90579078 None:intergenic 30.0%
GGATGGGAAAAAAAATGTTA+GGG + chr8_1:90579060-90579079 None:intergenic 30.0%
TGGATGGGAAAAAAAATGTT+AGG + chr8_1:90579061-90579080 None:intergenic 30.0%
ATTCAGAAACAAATAGAGGA+AGG + chr8_1:90579100-90579119 None:intergenic 30.0%
ATTGCCAAAAAAATGACAAG+TGG + chr8_1:90579129-90579148 None:intergenic 30.0%
TCAAAGGAATATATATGGAG+AGG + chr8_1:90579163-90579182 None:intergenic 30.0%
! TACACAAGATTTTACACAAG+AGG + chr8_1:90579341-90579360 None:intergenic 30.0%
TTTAAAAAAAAAGGGCAACC+CGG + chr8_1:90579445-90579464 None:intergenic 30.0%
! CTATTGTAATTTGTCCTGAT+GGG - chr8_1:90579688-90579707 Msa1225240:intron 30.0%
! CATCAACACTTTTATTCTGA+TGG + chr8_1:90579757-90579776 None:intergenic 30.0%
TGCCTATTAAATACAACATC+TGG + chr8_1:90579946-90579965 None:intergenic 30.0%
ATGCTCGCAAAAATATCATT+TGG + chr8_1:90580030-90580049 None:intergenic 30.0%
!! ATGATATTTTTGCGAGCATT+TGG - chr8_1:90580031-90580050 Msa1225240:intron 30.0%
!! TGATATTTTTGCGAGCATTT+GGG - chr8_1:90580032-90580051 Msa1225240:intron 30.0%
CAGTTATAATAAGACAGACT+AGG - chr8_1:90580192-90580211 Msa1225240:intron 30.0%
TTATAATAAGACAGACTAGG+AGG - chr8_1:90580195-90580214 Msa1225240:intron 30.0%
AGCAATGCTTCATGTAATAT+GGG - chr8_1:90580285-90580304 Msa1225240:intron 30.0%
GGGGACAAATTTAACTATAA+AGG + chr8_1:90580316-90580335 None:intergenic 30.0%
AAGTAAGATCGAATATTCCT+AGG - chr8_1:90580484-90580503 Msa1225240:intron 30.0%
AAGTAAGGACTAAACTTACA+AGG + chr8_1:90581013-90581032 None:intergenic 30.0%
!!! TTTTGCGATATTTTTTTCGG+AGG + chr8_1:90580739-90580758 None:intergenic 30.0%
! CAAGTTTAGAACACTATGAA+GGG + chr8_1:90580874-90580893 None:intergenic 30.0%
! ACAAGTTTAGAACACTATGA+AGG + chr8_1:90580875-90580894 None:intergenic 30.0%
AAGTAAGGACTAAACTTACA+AGG - chr8_1:90581013-90581032 Msa1225240:intron 30.0%
GTGAATCTTTATCTGCAATA+AGG - chr8_1:90581265-90581284 Msa1225240:intron 30.0%
! AAATTATTTAAGATCCCTCC+AGG + chr8_1:90581333-90581352 None:intergenic 30.0%
ATAGTAAATACATACATGGG+AGG + chr8_1:90581437-90581456 None:intergenic 30.0%
! TTGCTTGTTTCCAATTGTTT+TGG - chr8_1:90581655-90581674 Msa1225240:intron 30.0%
!! GGTTTTGATGATATTCTTCT+AGG - chr8_1:90581676-90581695 Msa1225240:intron 30.0%
! TTTGATGATATTCTTCTAGG+TGG - chr8_1:90581679-90581698 Msa1225240:intron 30.0%
! TTGATGATATTCTTCTAGGT+GGG - chr8_1:90581680-90581699 Msa1225240:intron 30.0%
AAAGAAACTGCTTAAGAAAC+AGG - chr8_1:90581717-90581736 Msa1225240:intron 30.0%
!! AATTTTGTTTCACCAGCAAT+CGG - chr8_1:90581791-90581810 Msa1225240:intron 30.0%
! TTAGCGCATATACAACATTT+TGG - chr8_1:90582272-90582291 Msa1225240:exon 30.0%
TAACTTTCTTTGACCTGAAA+AGG - chr8_1:90582311-90582330 Msa1225240:five_prime_UTR 30.0%
! CCAAATATTTCAACCTTTTC+AGG + chr8_1:90582327-90582346 None:intergenic 30.0%
CCTGAAAAGGTTGAAATATT+TGG - chr8_1:90582324-90582343 Msa1225240:five_prime_UTR 30.0%
ATAACGAGTTAACACTTACA+TGG + chr8_1:90582350-90582369 None:intergenic 30.0%
CTGGTTACACACAAATTCAA+TGG - chr8_1:90570559-90570578 Msa1225240:three_prime_UTR 35.0%
!! GAGTAACCGTTGAGTTTTAA+CGG + chr8_1:90570618-90570637 None:intergenic 35.0%
AAGTTTCGTATATTCGACAC+TGG + chr8_1:90570818-90570837 None:intergenic 35.0%
ATGGTCAATATGAGCAATGA+TGG + chr8_1:90570843-90570862 None:intergenic 35.0%
ATCATTGCTCATATTGACCA+TGG - chr8_1:90570842-90570861 Msa1225240:exon 35.0%
TCATTGCTCATATTGACCAT+GGG - chr8_1:90570843-90570862 Msa1225240:exon 35.0%
! GGAACAGTTTCTTGATAACA+TGG - chr8_1:90570928-90570947 Msa1225240:intron 35.0%
GACATCAACTGAATGGTTAA+AGG + chr8_1:90571089-90571108 None:intergenic 35.0%
AACATTTACTACACACTGCT+AGG + chr8_1:90571136-90571155 None:intergenic 35.0%
! TTAGTCCAATAAGCTTTTGG+TGG - chr8_1:90571437-90571456 Msa1225240:intron 35.0%
!!! CCAGAATCAAAGAGGTTTTT+TGG + chr8_1:90571466-90571485 None:intergenic 35.0%
CCAAAAAACCTCTTTGATTC+TGG - chr8_1:90571463-90571482 Msa1225240:intron 35.0%
TCTCAAGTCTTTCATGATCT+AGG + chr8_1:90571507-90571526 None:intergenic 35.0%
TATTTGGCATTGCAGAAATC+AGG + chr8_1:90571651-90571670 None:intergenic 35.0%
TGGAACTAAAAGCAGAGAAA+AGG - chr8_1:90571786-90571805 Msa1225240:intron 35.0%
GCAGAGAAAAGGTTACAATT+TGG - chr8_1:90571797-90571816 Msa1225240:intron 35.0%
AGAAAAGGTTACAATTTGGC+TGG - chr8_1:90571801-90571820 Msa1225240:intron 35.0%
! GACACAATAGTTTTCCAGAA+TGG + chr8_1:90571845-90571864 None:intergenic 35.0%
GAAAACTATTGTGTCTAGCA+AGG - chr8_1:90571850-90571869 Msa1225240:intron 35.0%
GTGTTGTCAAATAGCAGAAA+CGG - chr8_1:90571894-90571913 Msa1225240:intron 35.0%
CCAAAATGGTTTCTCATAAG+TGG + chr8_1:90571963-90571982 None:intergenic 35.0%
! CCACTTATGAGAAACCATTT+TGG - chr8_1:90571960-90571979 Msa1225240:intron 35.0%
TCACGGAAAATAGCTTATTG+TGG + chr8_1:90572094-90572113 None:intergenic 35.0%
TTTCAATAAAGGTAACGCCA+AGG + chr8_1:90572156-90572175 None:intergenic 35.0%
GGCGTTACCTTTATTGAAAA+CGG - chr8_1:90572157-90572176 Msa1225240:intron 35.0%
AAATGGCCGAATAGTAAGTT+CGG + chr8_1:90572213-90572232 None:intergenic 35.0%
!! AAAAAAAGTGTTCTTGGTGG+AGG + chr8_1:90572297-90572316 None:intergenic 35.0%
AGCCCATCAAAACATTATCA+AGG - chr8_1:90572340-90572359 Msa1225240:intron 35.0%
TTGACTATTCATCTGTGACT+AGG - chr8_1:90572376-90572395 Msa1225240:CDS 35.0%
AAAAAGCAAAAACCAGCTCA+CGG + chr8_1:90572541-90572560 None:intergenic 35.0%
!!! CACATTACAGGATTTTTTCG+TGG + chr8_1:90572824-90572843 None:intergenic 35.0%
! CTTTTATTGCCACAAAGTTG+TGG - chr8_1:90572895-90572914 Msa1225240:CDS 35.0%
TTTCCTTTCCAAATTGCAGA+TGG - chr8_1:90572927-90572946 Msa1225240:intron 35.0%
AAACCATCTGCAATTTGGAA+AGG + chr8_1:90572933-90572952 None:intergenic 35.0%
AGACAAAACCATCTGCAATT+TGG + chr8_1:90572938-90572957 None:intergenic 35.0%
!!! CCATGTTTCGTTCACTTTTT+CGG - chr8_1:90572958-90572977 Msa1225240:intron 35.0%
AATGCCAGATATTCTGTAAC+AGG - chr8_1:90573038-90573057 Msa1225240:CDS 35.0%
CTCTTAACCTTTCTGTTTCA+AGG - chr8_1:90573158-90573177 Msa1225240:intron 35.0%
TTAACCTTTCTGTTTCAAGG+AGG - chr8_1:90573161-90573180 Msa1225240:intron 35.0%
TAACCTTTCTGTTTCAAGGA+GGG - chr8_1:90573162-90573181 Msa1225240:intron 35.0%
AATTTGAGAACCTGTTAACC+AGG - chr8_1:90573371-90573390 Msa1225240:intron 35.0%
GTAGGAAGGAATAGGTATAA+TGG - chr8_1:90573655-90573674 Msa1225240:intron 35.0%
TCAAATATTAAAGCCCTCAG+TGG + chr8_1:90573737-90573756 None:intergenic 35.0%
! CCGATACTAGGAAAGAATTT+TGG - chr8_1:90573876-90573895 Msa1225240:intron 35.0%
CACTTCAGATGATAATTGGT+TGG - chr8_1:90573936-90573955 Msa1225240:intron 35.0%
AAACTAAAGTGTGGGACTAT+GGG + chr8_1:90574005-90574024 None:intergenic 35.0%
TAAACTAAAGTGTGGGACTA+TGG + chr8_1:90574006-90574025 None:intergenic 35.0%
! GTTGAAGTTTAGTTCCTCAT+AGG - chr8_1:90574040-90574059 Msa1225240:intron 35.0%
TGAACTTAGATGAACCTATG+AGG + chr8_1:90574057-90574076 None:intergenic 35.0%
CATAGGTTCATCTAAGTTCA+AGG - chr8_1:90574057-90574076 Msa1225240:intron 35.0%
TAGAATACCGCACAAACAAA+AGG + chr8_1:90574176-90574195 None:intergenic 35.0%
AGTTACTACGATCCATATAG+AGG - chr8_1:90574288-90574307 Msa1225240:CDS 35.0%
TTATAGTGCCATCTACAACT+CGG + chr8_1:90574329-90574348 None:intergenic 35.0%
GTAGATGGCACTATAAAGAA+AGG - chr8_1:90574333-90574352 Msa1225240:intron 35.0%
!!! AGGCGACAGAGTTTATTTTA+TGG - chr8_1:90574353-90574372 Msa1225240:intron 35.0%
TCTTTGGTAGAAGAGGAAAA+GGG + chr8_1:90574415-90574434 None:intergenic 35.0%
ATCTTTGGTAGAAGAGGAAA+AGG + chr8_1:90574416-90574435 None:intergenic 35.0%
CTACCAAAGATTAAGTTTGG+TGG - chr8_1:90574425-90574444 Msa1225240:intron 35.0%
! ACCAAAGATTAAGTTTGGTG+GGG - chr8_1:90574427-90574446 Msa1225240:intron 35.0%
! ATTAAGTTTGGTGGGGAATT+GGG - chr8_1:90574434-90574453 Msa1225240:intron 35.0%
! TCTTCAGCTTGAAGTTGATT+GGG + chr8_1:90574634-90574653 None:intergenic 35.0%
! AGATGACGAGGTAAAAGTAT+TGG - chr8_1:90574751-90574770 Msa1225240:intron 35.0%
! CTTTGGTAGTAGGAGTAATA+TGG + chr8_1:90574886-90574905 None:intergenic 35.0%
AGCCTGGGAAAAGAAATAAA+TGG - chr8_1:90575112-90575131 Msa1225240:intron 35.0%
CACGTAAAACATGAGAATAG+TGG + chr8_1:90575275-90575294 None:intergenic 35.0%
! GTTGATTTCACCACTTTGTA+TGG + chr8_1:90575309-90575328 None:intergenic 35.0%
AAAGTGGTGAAATCAACCAT+AGG - chr8_1:90575312-90575331 Msa1225240:intron 35.0%
TCAACCATAGGATACAATCA+AGG - chr8_1:90575324-90575343 Msa1225240:intron 35.0%
TTCACCTTGATTGTATCCTA+TGG + chr8_1:90575331-90575350 None:intergenic 35.0%
! AAAGTACCACTCAAGCTTAA+AGG - chr8_1:90575383-90575402 Msa1225240:intron 35.0%
AATCTTCCTTTAAGCTTGAG+TGG + chr8_1:90575392-90575411 None:intergenic 35.0%
GACCTATAGTTGTAACAATG+AGG - chr8_1:90575642-90575661 Msa1225240:CDS 35.0%
CTCCTCATTGTTACAACTAT+AGG + chr8_1:90575647-90575666 None:intergenic 35.0%
CTATAGTTGTAACAATGAGG+AGG - chr8_1:90575645-90575664 Msa1225240:CDS 35.0%
CAATGAGGAGGTTTAATCAA+TGG - chr8_1:90575657-90575676 Msa1225240:CDS 35.0%
AATCAATGGAAATGAGATGG+GGG + chr8_1:90575875-90575894 None:intergenic 35.0%
CAATCAATGGAAATGAGATG+GGG + chr8_1:90575876-90575895 None:intergenic 35.0%
GACAATCAATGGAAATGAGA+TGG + chr8_1:90575878-90575897 None:intergenic 35.0%
ATCTTGTGTTCTGCTTGAAT+AGG - chr8_1:90576132-90576151 Msa1225240:intron 35.0%
!! CATCTTTTGTTTCAGGCATT+TGG - chr8_1:90576516-90576535 Msa1225240:intron 35.0%
ATGTTCATGTCAAATCTGCT+AGG - chr8_1:90576726-90576745 Msa1225240:intron 35.0%
AAAATTGGATATTTAGGGGG+GGG + chr8_1:90576841-90576860 None:intergenic 35.0%
GAAAATTGGATATTTAGGGG+GGG + chr8_1:90576842-90576861 None:intergenic 35.0%
ATATACCAATGTCAGCTTCA+TGG + chr8_1:90576868-90576887 None:intergenic 35.0%
AAACCTGAACAATTTCCATG+TGG + chr8_1:90576973-90576992 None:intergenic 35.0%
!! ATCTACTCTTTGGCTTTAGT+AGG - chr8_1:90577014-90577033 Msa1225240:intron 35.0%
GTGCTTGAAAATATAAGACC+AGG + chr8_1:90577110-90577129 None:intergenic 35.0%
TTCACTCTGTATACAACACT+TGG + chr8_1:90577190-90577209 None:intergenic 35.0%
CCTTCAAGCATTATGTGATT+TGG + chr8_1:90577353-90577372 None:intergenic 35.0%
CCAAATCACATAATGCTTGA+AGG - chr8_1:90577350-90577369 Msa1225240:intron 35.0%
!! TTTGATTGCATTGGTTCTTG+TGG - chr8_1:90577713-90577732 Msa1225240:intron 35.0%
!! TTGATTGCATTGGTTCTTGT+GGG - chr8_1:90577714-90577733 Msa1225240:intron 35.0%
TTCAAGGAGATTCAGATACA+TGG + chr8_1:90577790-90577809 None:intergenic 35.0%
CCTTACTTCTTGACTTTAAC+TGG + chr8_1:90577847-90577866 None:intergenic 35.0%
CCAGTTAAAGTCAAGAAGTA+AGG - chr8_1:90577844-90577863 Msa1225240:intron 35.0%
AGTATGGAGTATACTGTTAC+TGG - chr8_1:90577875-90577894 Msa1225240:intron 35.0%
GTATGGAGTATACTGTTACT+GGG - chr8_1:90577876-90577895 Msa1225240:intron 35.0%
ACATCTTGAAAATGAGAGGT+AGG - chr8_1:90578065-90578084 Msa1225240:intron 35.0%
TTGAAAATGAGAGGTAGGAA+TGG - chr8_1:90578070-90578089 Msa1225240:intron 35.0%
!! CAAGATTCAAGTTGGTAGTA+GGG - chr8_1:90578134-90578153 Msa1225240:intron 35.0%
!! AAGATTCAAGTTGGTAGTAG+GGG - chr8_1:90578135-90578154 Msa1225240:intron 35.0%
! GGGTATCTGAAATAATTAGG+AGG + chr8_1:90578296-90578315 None:intergenic 35.0%
ATATACCTTGTACTCTGTAC+TGG - chr8_1:90578344-90578363 Msa1225240:intron 35.0%
ACAGATAAATGGTGAATGTG+TGG - chr8_1:90578569-90578588 Msa1225240:intron 35.0%
!! ATGCAGGTGCTATATTTTAC+TGG + chr8_1:90578980-90578999 None:intergenic 35.0%
TTGGGTTACCATTTATTGAG+TGG + chr8_1:90579025-90579044 None:intergenic 35.0%
GCGAATTCAGAAACAAATAG+AGG + chr8_1:90579104-90579123 None:intergenic 35.0%
!!! GCTTCCACTTGTCATTTTTT+TGG - chr8_1:90579122-90579141 Msa1225240:CDS 35.0%
TAAAGTTGTTGTCATGTGAC+TGG - chr8_1:90579286-90579305 Msa1225240:intron 35.0%
CTTGTGTAAAAAACAGGGTA+AGG - chr8_1:90579353-90579372 Msa1225240:intron 35.0%
AGTTATAGTCAATAACCCTC+TGG - chr8_1:90579465-90579484 Msa1225240:intron 35.0%
GTTATAGTCAATAACCCTCT+GGG - chr8_1:90579466-90579485 Msa1225240:intron 35.0%
TTATAGTCAATAACCCTCTG+GGG - chr8_1:90579467-90579486 Msa1225240:intron 35.0%
TTTCTTGAAAACTCGGTATC+TGG + chr8_1:90579651-90579670 None:intergenic 35.0%
CCATCAGGACAAATTACAAT+AGG + chr8_1:90579690-90579709 None:intergenic 35.0%
! CCTATTGTAATTTGTCCTGA+TGG - chr8_1:90579687-90579706 Msa1225240:intron 35.0%
AATGGTTGAACAAAAAGTGG+TGG + chr8_1:90579722-90579741 None:intergenic 35.0%
!!! ACCACTTTTTGTTCAACCAT+TGG - chr8_1:90579721-90579740 Msa1225240:intron 35.0%
TCCAATGGTTGAACAAAAAG+TGG + chr8_1:90579725-90579744 None:intergenic 35.0%
AGATCCATATACACTCTATG+AGG + chr8_1:90579851-90579870 None:intergenic 35.0%
!! GGATCTGAGATGAGTTTTAA+CGG - chr8_1:90579865-90579884 Msa1225240:intron 35.0%
GGAGACTAACATAGTAAGTT+AGG - chr8_1:90579886-90579905 Msa1225240:intron 35.0%
GAGCAATGCTTCATGTAATA+TGG - chr8_1:90580284-90580303 Msa1225240:intron 35.0%
!! TATTTTCAGGCGTATTCTGT+GGG - chr8_1:90580399-90580418 Msa1225240:CDS 35.0%
! TACAAGGTCGCAATTTTGTA+GGG + chr8_1:90581029-90581048 None:intergenic 35.0%
! TTACAAGGTCGCAATTTTGT+AGG + chr8_1:90581028-90581047 None:intergenic 35.0%
! TTACAAGGTCGCAATTTTGT+AGG - chr8_1:90581028-90581047 Msa1225240:intron 35.0%
! TACAAGGTCGCAATTTTGTA+GGG - chr8_1:90581029-90581048 Msa1225240:intron 35.0%
AAGTTAGGCACATATAAAGC+AGG + chr8_1:90581098-90581117 None:intergenic 35.0%
TAAACAGCGAACTGAAAGTT+AGG + chr8_1:90581113-90581132 None:intergenic 35.0%
CTTCATAACTGAATCAGAGA+GGG + chr8_1:90581148-90581167 None:intergenic 35.0%
TCTTCATAACTGAATCAGAG+AGG + chr8_1:90581149-90581168 None:intergenic 35.0%
ATCATTGGTATCTCTGTTCT+AGG - chr8_1:90581215-90581234 Msa1225240:intron 35.0%
GATGTATTAGCCAAATGCTA+CGG - chr8_1:90581291-90581310 Msa1225240:intron 35.0%
TGATGATATTCTTCTAGGTG+GGG - chr8_1:90581681-90581700 Msa1225240:intron 35.0%
AAGTTTCAGAACTGCCATAA+AGG + chr8_1:90581971-90581990 None:intergenic 35.0%
!! AGTTCTGAAACTTGAAAAGG+AGG - chr8_1:90581978-90581997 Msa1225240:CDS 35.0%
ATGTAAGTTGCAGCATTGTT+TGG - chr8_1:90582019-90582038 Msa1225240:CDS 35.0%
TACTATAAGGGATTCATCTG+AGG + chr8_1:90582089-90582108 None:intergenic 35.0%
GCGGACGCAATAAAATATAT+GGG + chr8_1:90582132-90582151 None:intergenic 35.0%
AGCGGACGCAATAAAATATA+TGG + chr8_1:90582133-90582152 None:intergenic 35.0%
CAGGTCAAAGAAAGTTAATG+AGG + chr8_1:90582308-90582327 None:intergenic 35.0%
ACACACAAATTCAATGGCCA+CGG - chr8_1:90570565-90570584 Msa1225240:three_prime_UTR 40.0%
! TTGGTGTTCGTTGAGAATGA+TGG + chr8_1:90570640-90570659 None:intergenic 40.0%
AAGAATCTAGTGGCGGTTAT+TGG + chr8_1:90570659-90570678 None:intergenic 40.0%
GGAATTGAAGAATCTAGTGG+CGG + chr8_1:90570666-90570685 None:intergenic 40.0%
CGAGGAATTGAAGAATCTAG+TGG + chr8_1:90570669-90570688 None:intergenic 40.0%
! GATAAGTTGCTTCAGGTTAC+TGG - chr8_1:90570881-90570900 Msa1225240:CDS 40.0%
TGTTCCTTCATTTCTCTCTG+CGG + chr8_1:90570914-90570933 None:intergenic 40.0%
ATGGATTTAGAGAGAGAACG+AGG - chr8_1:90570947-90570966 Msa1225240:intron 40.0%
AGGCATCACTATTAAGCTTC+AGG - chr8_1:90570967-90570986 Msa1225240:intron 40.0%
ACTACATTCACATACCTCGT+AGG + chr8_1:90571363-90571382 None:intergenic 40.0%
AATACAGATGGGGCGAAAAT+AGG + chr8_1:90571413-90571432 None:intergenic 40.0%
GGTATCCACCAAAAGCTTAT+TGG + chr8_1:90571445-90571464 None:intergenic 40.0%
TAGGACTACCAGAATCAAAG+AGG + chr8_1:90571474-90571493 None:intergenic 40.0%
TCTTTGATTCTGGTAGTCCT+AGG - chr8_1:90571473-90571492 Msa1225240:intron 40.0%
GTTGCTAATGTGTCTCTAAC+AGG + chr8_1:90571578-90571597 None:intergenic 40.0%
AATTCCTGAGTGACAGGATT+TGG + chr8_1:90571726-90571745 None:intergenic 40.0%
CCTATAAATTCCTGAGTGAC+AGG + chr8_1:90571732-90571751 None:intergenic 40.0%
CCTGTCACTCAGGAATTTAT+AGG - chr8_1:90571729-90571748 Msa1225240:intron 40.0%
CGACTTATGAGAAACCATTC+TGG - chr8_1:90571828-90571847 Msa1225240:intron 40.0%
!!! AAGGTTTTAAATTGCAGCCG+CGG - chr8_1:90571869-90571888 Msa1225240:intron 40.0%
!!! AAGGTTTTAAACTGCAGCTG+CGG - chr8_1:90572003-90572022 Msa1225240:intron 40.0%
! CTGTTGTCAAATAGCGGAAT+CGG - chr8_1:90572028-90572047 Msa1225240:intron 40.0%
! GTGTTGACAATTGCAGATCA+CGG + chr8_1:90572111-90572130 None:intergenic 40.0%
TGCGGTGATCTAAATAACCT+TGG - chr8_1:90572136-90572155 Msa1225240:intron 40.0%
AATCCATTGCCACAACTTTG+TGG + chr8_1:90572907-90572926 None:intergenic 40.0%
CCGAAAAAGTGAACGAAACA+TGG + chr8_1:90572961-90572980 None:intergenic 40.0%
TCTTTGATGTATCAGCAGGT+GGG + chr8_1:90573712-90573731 None:intergenic 40.0%
TTCTTTGATGTATCAGCAGG+TGG + chr8_1:90573713-90573732 None:intergenic 40.0%
ATACATCAAAGAAGCCACTG+AGG - chr8_1:90573720-90573739 Msa1225240:intron 40.0%
TACATCAAAGAAGCCACTGA+GGG - chr8_1:90573721-90573740 Msa1225240:intron 40.0%
! ACGGACCCTTGTTTAAGATT+TGG - chr8_1:90573847-90573866 Msa1225240:intron 40.0%
ATTTGGATGACACCGATACT+AGG - chr8_1:90573864-90573883 Msa1225240:intron 40.0%
! TCTGAAGTGTACATGTGATG+TGG + chr8_1:90573925-90573944 None:intergenic 40.0%
GTATACTTCCGAGTTGTAGA+TGG - chr8_1:90574318-90574337 Msa1225240:intron 40.0%
CTTTGGTAGAAGAGGAAAAG+GGG + chr8_1:90574414-90574433 None:intergenic 40.0%
TCCCCACCAAACTTAATCTT+TGG + chr8_1:90574431-90574450 None:intergenic 40.0%
! GATTAAGTTTGGTGGGGAAT+TGG - chr8_1:90574433-90574452 Msa1225240:intron 40.0%
! TTAAGTTTGGTGGGGAATTG+GGG - chr8_1:90574435-90574454 Msa1225240:intron 40.0%
! GAACAGGCAACTTTTGTTGA+AGG + chr8_1:90574465-90574484 None:intergenic 40.0%
! CTCTTCAGCTTGAAGTTGAT+TGG + chr8_1:90574635-90574654 None:intergenic 40.0%
!! TTGGTTCTGTAAAGATGACG+AGG - chr8_1:90574739-90574758 Msa1225240:intron 40.0%
!! CGAGGTAAAAGTATTGGTCA+TGG - chr8_1:90574757-90574776 Msa1225240:intron 40.0%
GATTCTCGTCTCTAGCATTA+AGG + chr8_1:90574864-90574883 None:intergenic 40.0%
! TTCTCATGTTTTACGTGCCT+TGG - chr8_1:90575278-90575297 Msa1225240:intron 40.0%
! TCTCATGTTTTACGTGCCTT+GGG - chr8_1:90575279-90575298 Msa1225240:intron 40.0%
GATTTCACCACTTTGTATGG+TGG + chr8_1:90575306-90575325 None:intergenic 40.0%
AAATGGAGAATGTTTCAGGC+AGG - chr8_1:90575353-90575372 Msa1225240:intron 40.0%
AGAGATGGGAATGATACCAA+TGG - chr8_1:90575499-90575518 Msa1225240:intron 40.0%
GAATGATACCAATGGATGAG+TGG - chr8_1:90575507-90575526 Msa1225240:intron 40.0%
TTCTGTAACCACTCATCCAT+TGG + chr8_1:90575518-90575537 None:intergenic 40.0%
TGAGGAGGTTTAATCAATGG+AGG - chr8_1:90575660-90575679 Msa1225240:CDS 40.0%
ATCAATGGAAATGAGATGGG+GGG + chr8_1:90575874-90575893 None:intergenic 40.0%
TCTGCTTTCATGCTTCACAT+CGG + chr8_1:90575900-90575919 None:intergenic 40.0%
GAGGAGAAACAATACATCAG+TGG + chr8_1:90575977-90575996 None:intergenic 40.0%
AGACAAACACAGACATGTTC+AGG + chr8_1:90575999-90576018 None:intergenic 40.0%
TTGTGTTCTGCTTGAATAGG+TGG - chr8_1:90576135-90576154 Msa1225240:intron 40.0%
TGTGTTCTGCTTGAATAGGT+GGG - chr8_1:90576136-90576155 Msa1225240:intron 40.0%
!! GATCACCCACCATTTTAGAA+AGG - chr8_1:90576210-90576229 Msa1225240:intron 40.0%
!! GTCTGCCTTTCTAAAATGGT+GGG + chr8_1:90576218-90576237 None:intergenic 40.0%
!! TGTCTGCCTTTCTAAAATGG+TGG + chr8_1:90576219-90576238 None:intergenic 40.0%
CAATACTGGTCAGCATCAAT+AGG + chr8_1:90576295-90576314 None:intergenic 40.0%
TTTGTTTCAGGCATTTGGCA+AGG - chr8_1:90576521-90576540 Msa1225240:intron 40.0%
TTGTTTCAGGCATTTGGCAA+GGG - chr8_1:90576522-90576541 Msa1225240:intron 40.0%
CAACTTACAGAAAGGTGAAC+TGG + chr8_1:90576642-90576661 None:intergenic 40.0%
ACATGTACGATCTGAATGTG+TGG - chr8_1:90576771-90576790 Msa1225240:intron 40.0%
AAATTGGATATTTAGGGGGG+GGG + chr8_1:90576840-90576859 None:intergenic 40.0%
CAGCTTCATGGCAAGAAAAT+TGG + chr8_1:90576856-90576875 None:intergenic 40.0%
TCAGGGTTCAAACTGAAAAC+CGG + chr8_1:90576899-90576918 None:intergenic 40.0%
!! ATGGGATTTGGCTTTAGATG+TGG - chr8_1:90576932-90576951 Msa1225240:intron 40.0%
!!! TGGCTTTAGATGTGGTTTTC+TGG - chr8_1:90576940-90576959 Msa1225240:intron 40.0%
!!! GGCTTTAGATGTGGTTTTCT+GGG - chr8_1:90576941-90576960 Msa1225240:intron 40.0%
TCTCCACATGGAAATTGTTC+AGG - chr8_1:90576967-90576986 Msa1225240:intron 40.0%
TACAGAGTGAACTGTGCTAA+TGG - chr8_1:90577199-90577218 Msa1225240:intron 40.0%
AATTGAGGAGCCAGTTGTTA+AGG - chr8_1:90577422-90577441 Msa1225240:intron 40.0%
ATTGTGTGTGTCCACACATA+TGG - chr8_1:90577526-90577545 Msa1225240:intron 40.0%
GCAAGTTAAGACCATATGTG+TGG + chr8_1:90577540-90577559 None:intergenic 40.0%
CTTACGCCAAAGGACTATAT+TGG - chr8_1:90577584-90577603 Msa1225240:intron 40.0%
! AACTGGCTCAAGAAAGAAGA+GGG - chr8_1:90577618-90577637 Msa1225240:intron 40.0%
CTCAGCTAGAGGTAATTCAT+AGG + chr8_1:90577690-90577709 None:intergenic 40.0%
CTATGAATTACCTCTAGCTG+AGG - chr8_1:90577688-90577707 Msa1225240:intron 40.0%
CAATCAAATACCTCAGCTAG+AGG + chr8_1:90577701-90577720 None:intergenic 40.0%
! GCTGAGGTATTTGATTGCAT+TGG - chr8_1:90577704-90577723 Msa1225240:intron 40.0%
GCACATGATTTACAGCTACA+GGG + chr8_1:90577744-90577763 None:intergenic 40.0%
!! TGCCTCTGTTTGACTAGTTT+GGG - chr8_1:90577761-90577780 Msa1225240:intron 40.0%
AAGTAAGGGTTACGCTAGTA+TGG - chr8_1:90577859-90577878 Msa1225240:intron 40.0%
GAATACATGCTGTTGAGTGT+TGG - chr8_1:90577938-90577957 Msa1225240:intron 40.0%
CCTACTACCAACTTGAATCT+TGG + chr8_1:90578136-90578155 None:intergenic 40.0%
!! CCAAGATTCAAGTTGGTAGT+AGG - chr8_1:90578133-90578152 Msa1225240:intron 40.0%
GGAGGATTCAAAGCCAAAAA+CGG + chr8_1:90578278-90578297 None:intergenic 40.0%
AACAGGGTGAACATAGTACA+GGG + chr8_1:90578316-90578335 None:intergenic 40.0%
TAACAGGGTGAACATAGTAC+AGG + chr8_1:90578317-90578336 None:intergenic 40.0%
TACGATTGTGCACAGAGATA+AGG - chr8_1:90578602-90578621 Msa1225240:intron 40.0%
TGTAATAGGCAATTTCCCGA+GGG + chr8_1:90578689-90578708 None:intergenic 40.0%
TTGTAATAGGCAATTTCCCG+AGG + chr8_1:90578690-90578709 None:intergenic 40.0%
ACTAATGTACCATACCAGGT+TGG - chr8_1:90578745-90578764 Msa1225240:intron 40.0%
!!! TCAATTCTGGTTTTCCAACC+TGG + chr8_1:90578762-90578781 None:intergenic 40.0%
TCCATTTATACCGTTCTTGC+TGG - chr8_1:90578951-90578970 Msa1225240:intron 40.0%
ACCAGCAAGAACGGTATAAA+TGG + chr8_1:90578955-90578974 None:intergenic 40.0%
TTACTGGAAACCAGCAAGAA+CGG + chr8_1:90578964-90578983 None:intergenic 40.0%
TTAGGGGAGATTAAACGGTT+GGG + chr8_1:90579043-90579062 None:intergenic 40.0%
CAGAAACAAATAGAGGAAGG+AGG + chr8_1:90579097-90579116 None:intergenic 40.0%
GGAGCTGCAATCTTTAACAA+GGG + chr8_1:90579216-90579235 None:intergenic 40.0%
TGGAGCTGCAATCTTTAACA+AGG + chr8_1:90579217-90579236 None:intergenic 40.0%
AAGTTATAGAGGGGTAACCT+TGG - chr8_1:90579254-90579273 Msa1225240:intron 40.0%
CGTACAATACACCAAATGGT+GGG - chr8_1:90579379-90579398 Msa1225240:intron 40.0%
GTGCCAACAATTCATGTGTT+GGG - chr8_1:90579559-90579578 Msa1225240:intron 40.0%
TAGCAAAGCTCTCTATGGAT+TGG + chr8_1:90579585-90579604 None:intergenic 40.0%
GGAATTAACGACCTCTTGAA+CGG + chr8_1:90579788-90579807 None:intergenic 40.0%
CTTTGATACCTATTCATGGG+TGG + chr8_1:90579818-90579837 None:intergenic 40.0%
TGCTCCTCATAGAGTGTATA+TGG - chr8_1:90579844-90579863 Msa1225240:intron 40.0%
!! GCATTTGGGTTGAAGAGAAA+TGG - chr8_1:90580046-90580065 Msa1225240:intron 40.0%
TAATAAGACAGACTAGGAGG+AGG - chr8_1:90580198-90580217 Msa1225240:intron 40.0%
!! GTATTTTCAGGCGTATTCTG+TGG - chr8_1:90580398-90580417 Msa1225240:intron 40.0%
!! GGCTTTGACTCTAAAGTTGA+AGG - chr8_1:90580425-90580444 Msa1225240:CDS 40.0%
ACTTGTCTTACCGTAGCATT+TGG + chr8_1:90581304-90581323 None:intergenic 40.0%
!! TTGCCTTATTTCTGATTGCC+TGG - chr8_1:90581631-90581650 Msa1225240:intron 40.0%
!! TGCCTTATTTCTGATTGCCT+GGG - chr8_1:90581632-90581651 Msa1225240:intron 40.0%
AACCCAGGCAATCAGAAATA+AGG + chr8_1:90581637-90581656 None:intergenic 40.0%
! TTCATATTTCCACCGATTGC+TGG + chr8_1:90581806-90581825 None:intergenic 40.0%
GAGCTTTACCTTAGATTGAC+CGG - chr8_1:90581862-90581881 Msa1225240:intron 40.0%
TACCTTAGATTGACCGGAAT+AGG - chr8_1:90581868-90581887 Msa1225240:CDS 40.0%
GAAAGACGTTAGTCCTATTC+CGG + chr8_1:90581884-90581903 None:intergenic 40.0%
!! GGCAGTTCTGAAACTTGAAA+AGG - chr8_1:90581975-90581994 Msa1225240:CDS 40.0%
! GCGCATATACAACATTTTGG+TGG - chr8_1:90582275-90582294 Msa1225240:exon 40.0%
TGAAGTAAAAGTGGGTCCCA+TGG - chr8_1:90570491-90570510 Msa1225240:three_prime_UTR 45.0%
! TTTTGTCATTGTGGCGCCAT+GGG + chr8_1:90570510-90570529 None:intergenic 45.0%
!! TGTCGTTGGTAGTAGCAACA+CGG + chr8_1:90570739-90570758 None:intergenic 45.0%
AAGCAACTTATCCGCTAACG+TGG + chr8_1:90570873-90570892 None:intergenic 45.0%
! GTTAGCGGATAAGTTGCTTC+AGG - chr8_1:90570874-90570893 Msa1225240:CDS 45.0%
TAGACCAAATCCTGTCACTC+AGG - chr8_1:90571719-90571738 Msa1225240:intron 45.0%
TGGTTTCTCATAAGTGGCGA+TGG + chr8_1:90571957-90571976 None:intergenic 45.0%
CAATTGTCAACACTGAGCTG+CGG - chr8_1:90572118-90572137 Msa1225240:intron 45.0%
!! CCTGAGAAGCATCTACTACA+AGG + chr8_1:90572436-90572455 None:intergenic 45.0%
CCTTGTAGTAGATGCTTCTC+AGG - chr8_1:90572433-90572452 Msa1225240:intron 45.0%
TAGTAGATGCTTCTCAGGTG+AGG - chr8_1:90572438-90572457 Msa1225240:intron 45.0%
TTGCCACAAAGTTGTGGCAA+TGG - chr8_1:90572901-90572920 Msa1225240:intron 45.0%
GGTTCTCAAGGAGATTGAAG+AGG - chr8_1:90573101-90573120 Msa1225240:intron 45.0%
TCTCCCTCCTTGAAACAGAA+AGG + chr8_1:90573168-90573187 None:intergenic 45.0%
GTGGTTAGAGTTTACACGTC+AGG - chr8_1:90573340-90573359 Msa1225240:intron 45.0%
GCAAGAAAGTCCTGGTTAAC+AGG + chr8_1:90573384-90573403 None:intergenic 45.0%
ATTCTCTGCTCTGCAAAGGT+CGG - chr8_1:90573524-90573543 Msa1225240:intron 45.0%
TTTGATGTATCAGCAGGTGG+GGG + chr8_1:90573710-90573729 None:intergenic 45.0%
CTTTGATGTATCAGCAGGTG+GGG + chr8_1:90573711-90573730 None:intergenic 45.0%
GGCTTCTTTGATGTATCAGC+AGG + chr8_1:90573716-90573735 None:intergenic 45.0%
TATGGGTAGAACCTCAGACA+TGG + chr8_1:90573988-90574007 None:intergenic 45.0%
CAAGCTGAAGAGTTGTTTGC+TGG - chr8_1:90574643-90574662 Msa1225240:intron 45.0%
! TGAAGAGTTGTTTGCTGGTG+AGG - chr8_1:90574648-90574667 Msa1225240:intron 45.0%
GCTTCACATCGGACAATCAA+TGG + chr8_1:90575889-90575908 None:intergenic 45.0%
CAAACACAGACATGTTCAGG+AGG + chr8_1:90575996-90576015 None:intergenic 45.0%
CAATTCACTCCCTGGATATG+AGG - chr8_1:90576237-90576256 Msa1225240:intron 45.0%
ATATGAGGAAGCCACTCCTA+TGG - chr8_1:90576252-90576271 Msa1225240:intron 45.0%
GGTCAGCATCAATAGGAAAC+AGG + chr8_1:90576288-90576307 None:intergenic 45.0%
ACTCAATGATGCTGCACTGA+AGG - chr8_1:90576460-90576479 Msa1225240:intron 45.0%
TGTTTCAGGCATTTGGCAAG+GGG - chr8_1:90576523-90576542 Msa1225240:intron 45.0%
AATTGGATATTTAGGGGGGG+GGG + chr8_1:90576839-90576858 None:intergenic 45.0%
TCTTGCCATGAAGCTGACAT+TGG - chr8_1:90576860-90576879 Msa1225240:intron 45.0%
CCATAGCACTAGAGGTTTCA+GGG + chr8_1:90576916-90576935 None:intergenic 45.0%
CCTGAAACCTCTAGTGCTAT+GGG - chr8_1:90576914-90576933 Msa1225240:intron 45.0%
ACCTCTAGTGCTATGGGATT+TGG - chr8_1:90576920-90576939 Msa1225240:intron 45.0%
! TTTTCTGGGTCTTCTCCACA+TGG - chr8_1:90576955-90576974 Msa1225240:intron 45.0%
CACTTGGAGCAGTAGTTATC+AGG + chr8_1:90577174-90577193 None:intergenic 45.0%
! GATCTTCTTTTACCAGGCTC+AGG + chr8_1:90577402-90577421 None:intergenic 45.0%
GATTGAGATGCTTACGCCAA+AGG - chr8_1:90577574-90577593 Msa1225240:intron 45.0%
TCTTGAGCCAGTTCCATAAG+CGG + chr8_1:90577611-90577630 None:intergenic 45.0%
! GAACTGGCTCAAGAAAGAAG+AGG - chr8_1:90577617-90577636 Msa1225240:intron 45.0%
GGCACATGATTTACAGCTAC+AGG + chr8_1:90577745-90577764 None:intergenic 45.0%
! GTGCCTCTGTTTGACTAGTT+TGG - chr8_1:90577760-90577779 Msa1225240:intron 45.0%
AGCCCAAACTAGTCAAACAG+AGG + chr8_1:90577766-90577785 None:intergenic 45.0%
AATGAGAGGTAGGAATGGAC+TGG - chr8_1:90578075-90578094 Msa1225240:intron 45.0%
! ATGAGAGGTAGGAATGGACT+GGG - chr8_1:90578076-90578095 Msa1225240:intron 45.0%
!! AAGTGTGAGAAGGCCGTTTT+TGG - chr8_1:90578262-90578281 Msa1225240:intron 45.0%
CCATTCCAGTACAGAGTACA+AGG + chr8_1:90578352-90578371 None:intergenic 45.0%
CCTTGTACTCTGTACTGGAA+TGG - chr8_1:90578349-90578368 Msa1225240:intron 45.0%
ACTCTGTACTGGAATGGAAG+AGG - chr8_1:90578355-90578374 Msa1225240:intron 45.0%
GTAATAGGCAATTTCCCGAG+GGG + chr8_1:90578688-90578707 None:intergenic 45.0%
!!! TCTGGTTTTCCAACCTGGTA+TGG + chr8_1:90578757-90578776 None:intergenic 45.0%
GTTAGGGGAGATTAAACGGT+TGG + chr8_1:90579044-90579063 None:intergenic 45.0%
GTTGTTGTCATGTGACTGGA+AGG - chr8_1:90579290-90579309 Msa1225240:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + chr8_1:90579330-90579349 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG - chr8_1:90579375-90579394 Msa1225240:intron 45.0%
GCGTACAATACACCAAATGG+TGG - chr8_1:90579378-90579397 Msa1225240:intron 45.0%
TTCAAACCTGAGACCTAGAG+AGG + chr8_1:90579531-90579550 None:intergenic 45.0%
CATGAATTGTTGGCACCTGA+GGG + chr8_1:90579555-90579574 None:intergenic 45.0%
ACATGAATTGTTGGCACCTG+AGG + chr8_1:90579556-90579575 None:intergenic 45.0%
GGTGCCAACAATTCATGTGT+TGG - chr8_1:90579558-90579577 Msa1225240:intron 45.0%
TGGCCCAACACATGAATTGT+TGG + chr8_1:90579565-90579584 None:intergenic 45.0%
TCCATAGAGAGCTTTGCTAG+TGG - chr8_1:90579586-90579605 Msa1225240:intron 45.0%
TCCACTAGCAAAGCTCTCTA+TGG + chr8_1:90579590-90579609 None:intergenic 45.0%
TAGAGAGCTTTGCTAGTGGA+TGG - chr8_1:90579590-90579609 Msa1225240:intron 45.0%
AAAACTCGGTATCTGGCCTA+AGG + chr8_1:90579644-90579663 None:intergenic 45.0%
GGTTGAACAAAAAGTGGTGG+TGG + chr8_1:90579719-90579738 None:intergenic 45.0%
! TGATGGGTGTGCAAATCCAA+TGG + chr8_1:90579740-90579759 None:intergenic 45.0%
ATGTTGTTGCTCCGTTCAAG+AGG - chr8_1:90579774-90579793 Msa1225240:CDS 45.0%
CTATTCATGGGTGGAGCAAT+AGG + chr8_1:90579809-90579828 None:intergenic 45.0%
CTATTGCTCCACCCATGAAT+AGG - chr8_1:90579807-90579826 Msa1225240:intron 45.0%
GGAGGAGGTTTATCTTCAGT+TGG - chr8_1:90580213-90580232 Msa1225240:CDS 45.0%
TCAGTTGGCTGTCATCTCTT+AGG - chr8_1:90580228-90580247 Msa1225240:CDS 45.0%
AGTTGAAGGAGCTCATACCA+CGG - chr8_1:90580439-90580458 Msa1225240:intron 45.0%
! TCTCTGTTCTAGGCATGCAT+AGG - chr8_1:90581225-90581244 Msa1225240:intron 45.0%
GGTAAGACAAGTTGCAAACC+TGG - chr8_1:90581312-90581331 Msa1225240:intron 45.0%
AAGACAAGTTGCAAACCTGG+AGG - chr8_1:90581315-90581334 Msa1225240:intron 45.0%
AGACAAGTTGCAAACCTGGA+GGG - chr8_1:90581316-90581335 Msa1225240:intron 45.0%
CAATTGGAAACAAGCAACCC+AGG + chr8_1:90581652-90581671 None:intergenic 45.0%
TTTGTTTCACCAGCAATCGG+TGG - chr8_1:90581794-90581813 Msa1225240:intron 45.0%
GTCCTATTCCGGTCAATCTA+AGG + chr8_1:90581873-90581892 None:intergenic 45.0%
ACTAACGTCTTTCTCCAACC+AGG - chr8_1:90581891-90581910 Msa1225240:CDS 45.0%
TTCTCTTCTTTCCTTCAGCC+TGG + chr8_1:90581912-90581931 None:intergenic 45.0%
TGTGCCTCAAGAAGCCTTTA+TGG - chr8_1:90581954-90581973 Msa1225240:CDS 45.0%
ACTGCCATAAAGGCTTCTTG+AGG + chr8_1:90581961-90581980 None:intergenic 45.0%
!!! ATTTTCATAAATAATTAAAT+AGG - chr8_1:90578000-90578019 Msa1225240:intron 5.0%
! GTTTTGTCATTGTGGCGCCA+TGG + chr8_1:90570511-90570530 None:intergenic 50.0%
TCAATGGCCACGGAACTTTG+TGG - chr8_1:90570575-90570594 Msa1225240:three_prime_UTR 50.0%
AGTAGCAACACGGCAGAAGA+CGG + chr8_1:90570729-90570748 None:intergenic 50.0%
!! GAAGTTAGAGACGGTGTCGT+TGG + chr8_1:90570753-90570772 None:intergenic 50.0%
ACGATCCTGGCCATCTTTAG+CGG + chr8_1:90570783-90570802 None:intergenic 50.0%
GAACCTTAGAGAGACGATCC+TGG + chr8_1:90570796-90570815 None:intergenic 50.0%
TGTGCCGCAGAGAGAAATGA+AGG - chr8_1:90570907-90570926 Msa1225240:CDS 50.0%
TAGGAGAAGTCGACATGTCC+AGG + chr8_1:90571344-90571363 None:intergenic 50.0%
!! ACATGTCGACTTCTCCTACG+AGG - chr8_1:90571346-90571365 Msa1225240:intron 50.0%
TTCTGGTAGTCCTAGGAGAG+CGG - chr8_1:90571480-90571499 Msa1225240:intron 50.0%
! AGAAATCAGGCTCGGTTGGA+CGG + chr8_1:90571638-90571657 None:intergenic 50.0%
! TTGCAGAAATCAGGCTCGGT+TGG + chr8_1:90571642-90571661 None:intergenic 50.0%
GGCATTGCAGAAATCAGGCT+CGG + chr8_1:90571646-90571665 None:intergenic 50.0%
GCTATTTGACAACACTGCCG+CGG + chr8_1:90571889-90571908 None:intergenic 50.0%
GCGGCACTGTTGTCAAATAG+CGG - chr8_1:90572022-90572041 Msa1225240:intron 50.0%
GAATCGGCGCTATTGCATAC+CGG - chr8_1:90572044-90572063 Msa1225240:intron 50.0%
CGCTTCAACCCCCTGTTATT+TGG + chr8_1:90572579-90572598 None:intergenic 50.0%
TTGAGATGCTGCTCGACAGA+TGG + chr8_1:90572863-90572882 None:intergenic 50.0%
AGAACCAGATCGGGTTCTCA+AGG - chr8_1:90573089-90573108 Msa1225240:intron 50.0%
ATCTCCTTGAGAACCCGATC+TGG + chr8_1:90573096-90573115 None:intergenic 50.0%
ATGCTCGTGCAAGAAAGTCC+TGG + chr8_1:90573392-90573411 None:intergenic 50.0%
GACCTTTGCAGAGCAGAGAA+TGG + chr8_1:90573525-90573544 None:intergenic 50.0%
CCTCTATGTGCATGTGAGTG+TGG + chr8_1:90574120-90574139 None:intergenic 50.0%
CCACACTCACATGCACATAG+AGG - chr8_1:90574117-90574136 Msa1225240:intron 50.0%
!! CACTTTGTATGGTGGACCCA+AGG + chr8_1:90575298-90575317 None:intergenic 50.0%
CTTGGGTCCACCATACAAAG+TGG - chr8_1:90575296-90575315 Msa1225240:intron 50.0%
ATGCTGTAGAGCCTCGTCTT+AGG - chr8_1:90575600-90575619 Msa1225240:intron 50.0%
TGTACAAGCCACCTAAGACG+AGG + chr8_1:90575614-90575633 None:intergenic 50.0%
TGGAAATGAGATGGGGGGAT+AGG + chr8_1:90575869-90575888 None:intergenic 50.0%
AACAGTAGCTGATGCCAGAG+TGG - chr8_1:90576180-90576199 Msa1225240:intron 50.0%
ACAGTAGCTGATGCCAGAGT+GGG - chr8_1:90576181-90576200 Msa1225240:intron 50.0%
AAGGCAGACAATTCACTCCC+TGG - chr8_1:90576229-90576248 Msa1225240:intron 50.0%
GAGTGGCTTCCTCATATCCA+GGG + chr8_1:90576249-90576268 None:intergenic 50.0%
AACAGGCCACAGAACACCAT+AGG + chr8_1:90576271-90576290 None:intergenic 50.0%
ATCTCGTAGCTCGGGAAATC+TGG + chr8_1:90576423-90576442 None:intergenic 50.0%
TCAAGTGCATCTCGTAGCTC+GGG + chr8_1:90576431-90576450 None:intergenic 50.0%
CTCAAGTGCATCTCGTAGCT+CGG + chr8_1:90576432-90576451 None:intergenic 50.0%
CAATGATGCTGCACTGAAGG+TGG - chr8_1:90576463-90576482 Msa1225240:intron 50.0%
ATTGGATATTTAGGGGGGGG+GGG + chr8_1:90576838-90576857 None:intergenic 50.0%
CCCTGAAACCTCTAGTGCTA+TGG - chr8_1:90576913-90576932 Msa1225240:intron 50.0%
CCCATAGCACTAGAGGTTTC+AGG + chr8_1:90576917-90576936 None:intergenic 50.0%
GCCAAATCCCATAGCACTAG+AGG + chr8_1:90576924-90576943 None:intergenic 50.0%
CCAGGCTCAGGAAGTAAAGA+TGG + chr8_1:90577390-90577409 None:intergenic 50.0%
CCATCTTTACTTCCTGAGCC+TGG - chr8_1:90577387-90577406 Msa1225240:intron 50.0%
AGCGGGCCAATATAGTCCTT+TGG + chr8_1:90577593-90577612 None:intergenic 50.0%
GGACTATATTGGCCCGCTTA+TGG - chr8_1:90577595-90577614 Msa1225240:intron 50.0%
TATTGGCCCGCTTATGGAAC+TGG - chr8_1:90577601-90577620 Msa1225240:intron 50.0%
CTTGAGCCAGTTCCATAAGC+GGG + chr8_1:90577610-90577629 None:intergenic 50.0%
!! TGAGAGGTAGGAATGGACTG+GGG - chr8_1:90578077-90578096 Msa1225240:intron 50.0%
!! TTCAAGTTGGTAGTAGGGGC+TGG - chr8_1:90578139-90578158 Msa1225240:intron 50.0%
!! GTAGGGGCTGGTTTCAATAC+AGG - chr8_1:90578151-90578170 Msa1225240:intron 50.0%
TGGTGAATGTGTGGAGCCAT+TGG - chr8_1:90578578-90578597 Msa1225240:intron 50.0%
CTGTGCACAATCGTAGCCAA+TGG + chr8_1:90578597-90578616 None:intergenic 50.0%
CAACTTTACCAGTTGCGCCA+AGG + chr8_1:90579274-90579293 None:intergenic 50.0%
GTCATGTGACTGGAAGGTCA+CGG - chr8_1:90579296-90579315 Msa1225240:intron 50.0%
TCATGTGACTGGAAGGTCAC+GGG - chr8_1:90579297-90579316 Msa1225240:intron 50.0%
CTAAAGCTCCCACATACGCA+GGG + chr8_1:90579418-90579437 None:intergenic 50.0%
ACTAAAGCTCCCACATACGC+AGG + chr8_1:90579419-90579438 None:intergenic 50.0%
! ATGTGGGAGCTTTAGTGCAC+CGG - chr8_1:90579423-90579442 Msa1225240:intron 50.0%
!! AGTCAATAACCCTCTGGGGT+TGG - chr8_1:90579471-90579490 Msa1225240:intron 50.0%
GTCTCAGGTTTGAATCCCTC+AGG - chr8_1:90579537-90579556 Msa1225240:intron 50.0%
! AGAGCTTTGCTAGTGGATGG+TGG - chr8_1:90579593-90579612 Msa1225240:intron 50.0%
! GAGCTTTGCTAGTGGATGGT+GGG - chr8_1:90579594-90579613 Msa1225240:intron 50.0%
TAAGGACCAACTAATCCGGG+GGG + chr8_1:90579626-90579645 None:intergenic 50.0%
CTAAGGACCAACTAATCCGG+GGG + chr8_1:90579627-90579646 None:intergenic 50.0%
CCTAAGGACCAACTAATCCG+GGG + chr8_1:90579628-90579647 None:intergenic 50.0%
GCCTAAGGACCAACTAATCC+GGG + chr8_1:90579629-90579648 None:intergenic 50.0%
GGCCTAAGGACCAACTAATC+CGG + chr8_1:90579630-90579649 None:intergenic 50.0%
TTCAGGCGTATTCTGTGGGA+AGG - chr8_1:90580403-90580422 Msa1225240:CDS 50.0%
TCAGGCGTATTCTGTGGGAA+GGG - chr8_1:90580404-90580423 Msa1225240:CDS 50.0%
TCTTTCTCCAACCAGGCTGA+AGG - chr8_1:90581898-90581917 Msa1225240:CDS 50.0%
CTTCTTTCCTTCAGCCTGGT+TGG + chr8_1:90581908-90581927 None:intergenic 50.0%
!! TCCGCTGATTTCCTACTTCG+TGG - chr8_1:90582147-90582166 Msa1225240:CDS 50.0%
CCCACGAAGTAGGAAATCAG+CGG + chr8_1:90582151-90582170 None:intergenic 50.0%
!! CCGCTGATTTCCTACTTCGT+GGG - chr8_1:90582148-90582167 Msa1225240:CDS 50.0%
! ACTCGTTTTGCCCACGAAGT+AGG + chr8_1:90582161-90582180 None:intergenic 50.0%
ATGGCCACGGAACTTTGTGG+CGG - chr8_1:90570578-90570597 Msa1225240:three_prime_UTR 55.0%
GGGAAAGGTGAAGCGAGGTT+TGG + chr8_1:90570693-90570712 None:intergenic 55.0%
GGCGGAGTCGAAGTTAGAGA+CGG + chr8_1:90570762-90570781 None:intergenic 55.0%
TTCGACTCCGCCGCTAAAGA+TGG - chr8_1:90570770-90570789 Msa1225240:three_prime_UTR 55.0%
ATCCTGGCCATCTTTAGCGG+CGG + chr8_1:90570780-90570799 None:intergenic 55.0%
TGGCCAGGATCGTCTCTCTA+AGG - chr8_1:90570790-90570809 Msa1225240:three_prime_UTR 55.0%
CCATGGGAAGTCCACGTTAG+CGG - chr8_1:90570859-90570878 Msa1225240:CDS 55.0%
TGATCTAGGTCCGCTCTCCT+AGG + chr8_1:90571493-90571512 None:intergenic 55.0%
GTGATATCCTCACCGTGAGC+TGG - chr8_1:90572526-90572545 Msa1225240:intron 55.0%
GCAAAAACCAGCTCACGGTG+AGG + chr8_1:90572536-90572555 None:intergenic 55.0%
TTCCGGGTGCAGAACCAGAT+CGG - chr8_1:90573079-90573098 Msa1225240:intron 55.0%
CGCCATTCTCTGCTCTGCAA+AGG - chr8_1:90573520-90573539 Msa1225240:intron 55.0%
CTGTAGAGCCTCGTCTTAGG+TGG - chr8_1:90575603-90575622 Msa1225240:intron 55.0%
CCACAAGGTGAGTGACTTCG+TGG + chr8_1:90575801-90575820 None:intergenic 55.0%
CCACGAAGTCACTCACCTTG+TGG - chr8_1:90575798-90575817 Msa1225240:intron 55.0%
GGAGTGGCTTCCTCATATCC+AGG + chr8_1:90576250-90576269 None:intergenic 55.0%
GCCACTCCTATGGTGTTCTG+TGG - chr8_1:90576262-90576281 Msa1225240:intron 55.0%
GCCACAGAACACCATAGGAG+TGG + chr8_1:90576266-90576285 None:intergenic 55.0%
TTGGATATTTAGGGGGGGGG+GGG + chr8_1:90576837-90576856 None:intergenic 55.0%
GGAGTGCAGTGCAGTTGGAT+GGG + chr8_1:90579076-90579095 None:intergenic 55.0%
! AGGAGTGCAGTGCAGTTGGA+TGG + chr8_1:90579077-90579096 None:intergenic 55.0%
! AAGGAGGAGTGCAGTGCAGT+TGG + chr8_1:90579081-90579100 None:intergenic 55.0%
AAGGTCACGGGTTCAAGTCC+TGG - chr8_1:90579309-90579328 Msa1225240:intron 55.0%
ACATACGCAGGGTCTGGGAA+GGG + chr8_1:90579407-90579426 None:intergenic 55.0%
TTCCCAGACCCTGCGTATGT+GGG - chr8_1:90579407-90579426 Msa1225240:intron 55.0%
! TGTGGGAGCTTTAGTGCACC+GGG - chr8_1:90579424-90579443 Msa1225240:intron 55.0%
TTGGCCTAGTGGTGAAGGGT+TGG - chr8_1:90579490-90579509 Msa1225240:intron 55.0%
AGGTCCAACCCTTCACCACT+AGG + chr8_1:90579497-90579516 None:intergenic 55.0%
AGTGGTGAAGGGTTGGACCT+AGG - chr8_1:90579497-90579516 Msa1225240:intron 55.0%
CTAGAGAGGAGCAGACTCCT+AGG + chr8_1:90579517-90579536 None:intergenic 55.0%
CTAGGAGTCTGCTCCTCTCT+AGG - chr8_1:90579515-90579534 Msa1225240:intron 55.0%
TCTGCTCCTCTCTAGGTCTC+AGG - chr8_1:90579522-90579541 Msa1225240:intron 55.0%
!! TTGCTAGTGGATGGTGGGAC+TGG - chr8_1:90579599-90579618 Msa1225240:intron 55.0%
!! CCCCGGATTAGTTGGTCCTT+AGG - chr8_1:90579625-90579644 Msa1225240:intron 55.0%
TGGCCACGGAACTTTGTGGC+GGG - chr8_1:90570579-90570598 Msa1225240:three_prime_UTR 60.0%
TGACCCGCCACAAAGTTCCG+TGG + chr8_1:90570585-90570604 None:intergenic 60.0%
GGTGAAGCGAGGTTTGGACG+AGG + chr8_1:90570687-90570706 None:intergenic 60.0%
AGAAGACGGAGGAGTTGCGG+CGG + chr8_1:90570715-90570734 None:intergenic 60.0%
GGCAGAAGACGGAGGAGTTG+CGG + chr8_1:90570718-90570737 None:intergenic 60.0%
AGCAACACGGCAGAAGACGG+AGG + chr8_1:90570726-90570745 None:intergenic 60.0%
CCGCTAACGTGGACTTCCCA+TGG + chr8_1:90570862-90570881 None:intergenic 60.0%
TCGATCACTCGCTGCGTGTG+AGG - chr8_1:90572403-90572422 Msa1225240:CDS 60.0%
CGATCACTCGCTGCGTGTGA+GGG - chr8_1:90572404-90572423 Msa1225240:CDS 60.0%
GCTTCTCAGGTGAGGCTCCA+TGG - chr8_1:90572446-90572465 Msa1225240:intron 60.0%
TCCGGGTGCAGAACCAGATC+GGG - chr8_1:90573080-90573099 Msa1225240:intron 60.0%
!! ACCCGATCTGGTTCTGCACC+CGG + chr8_1:90573084-90573103 None:intergenic 60.0%
GGTGATCGTGTCACCCACTC+TGG + chr8_1:90576197-90576216 None:intergenic 60.0%
TGGATATTTAGGGGGGGGGG+GGG + chr8_1:90576836-90576855 None:intergenic 60.0%
AGGGGTAACCTTGGCGCAAC+TGG - chr8_1:90579263-90579282 Msa1225240:intron 60.0%
TGGGAAGGGGTCCCACCATT+TGG + chr8_1:90579393-90579412 None:intergenic 60.0%
CATACGCAGGGTCTGGGAAG+GGG + chr8_1:90579406-90579425 None:intergenic 60.0%
CACATACGCAGGGTCTGGGA+AGG + chr8_1:90579408-90579427 None:intergenic 60.0%
CTTCCCAGACCCTGCGTATG+TGG - chr8_1:90579406-90579425 Msa1225240:intron 60.0%
CTCCCACATACGCAGGGTCT+GGG + chr8_1:90579412-90579431 None:intergenic 60.0%
ACCACTAGGCCAACCCCAGA+GGG + chr8_1:90579483-90579502 None:intergenic 60.0%
!! TGGGGTTGGCCTAGTGGTGA+AGG - chr8_1:90579485-90579504 Msa1225240:intron 60.0%
!! GGGGTTGGCCTAGTGGTGAA+GGG - chr8_1:90579486-90579505 Msa1225240:intron 60.0%
!! ACTGGTCCCCCCGGATTAGT+TGG - chr8_1:90579617-90579636 Msa1225240:intron 60.0%
!! TGGTGGTGGATGCTCCCATC+AGG + chr8_1:90579705-90579724 None:intergenic 60.0%
AAGACGGAGGAGTTGCGGCG+GGG + chr8_1:90570713-90570732 None:intergenic 65.0%
GAAGACGGAGGAGTTGCGGC+GGG + chr8_1:90570714-90570733 None:intergenic 65.0%
CTCCGCCGCTAAAGATGGCC+AGG - chr8_1:90570775-90570794 Msa1225240:three_prime_UTR 65.0%
GATATTTAGGGGGGGGGGGG+GGG + chr8_1:90576834-90576853 None:intergenic 65.0%
GGATATTTAGGGGGGGGGGG+GGG + chr8_1:90576835-90576854 None:intergenic 65.0%
GCTCCCACATACGCAGGGTC+TGG + chr8_1:90579413-90579432 None:intergenic 65.0%
!! ACCCTCTGGGGTTGGCCTAG+TGG - chr8_1:90579479-90579498 Msa1225240:intron 65.0%
CACCACTAGGCCAACCCCAG+AGG + chr8_1:90579484-90579503 None:intergenic 65.0%
CGGCGGGGAAAGGTGAAGCG+AGG + chr8_1:90570698-90570717 None:intergenic 70.0%
GGAGGAGTTGCGGCGGGGAA+AGG + chr8_1:90570708-90570727 None:intergenic 70.0%
!! GATGGTGGGACTGGTCCCCC+CGG - chr8_1:90579608-90579627 Msa1225240:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 90570469 90582384 90570469 ID=Msa1225240;Name=Msa1225240
chr8_1 mRNA 90570469 90582384 90570469 ID=Msa1225240-mRNA-1;Parent=Msa1225240;Name=Msa1225240-mRNA-1;_AED=0.20;_eAED=0.20;_QI=109|0.81|0.86|0.91|1|1|23|376|744
chr8_1 exon 90570469 90570940 90570469 ID=Msa1225240-mRNA-1:exon:32982;Parent=Msa1225240-mRNA-1
chr8_1 exon 90571115 90571155 90571115 ID=Msa1225240-mRNA-1:exon:32981;Parent=Msa1225240-mRNA-1
chr8_1 exon 90571541 90571616 90571541 ID=Msa1225240-mRNA-1:exon:32980;Parent=Msa1225240-mRNA-1
chr8_1 exon 90572368 90572445 90572368 ID=Msa1225240-mRNA-1:exon:32979;Parent=Msa1225240-mRNA-1
chr8_1 exon 90572875 90572917 90572875 ID=Msa1225240-mRNA-1:exon:32978;Parent=Msa1225240-mRNA-1
chr8_1 exon 90573025 90573092 90573025 ID=Msa1225240-mRNA-1:exon:32977;Parent=Msa1225240-mRNA-1
chr8_1 exon 90574230 90574317 90574230 ID=Msa1225240-mRNA-1:exon:32976;Parent=Msa1225240-mRNA-1
chr8_1 exon 90574956 90575029 90574956 ID=Msa1225240-mRNA-1:exon:32975;Parent=Msa1225240-mRNA-1
chr8_1 exon 90575144 90575278 90575144 ID=Msa1225240-mRNA-1:exon:32974;Parent=Msa1225240-mRNA-1
chr8_1 exon 90575410 90575481 90575410 ID=Msa1225240-mRNA-1:exon:32973;Parent=Msa1225240-mRNA-1
chr8_1 exon 90575625 90575711 90575625 ID=Msa1225240-mRNA-1:exon:32972;Parent=Msa1225240-mRNA-1
chr8_1 exon 90575865 90575946 90575865 ID=Msa1225240-mRNA-1:exon:32971;Parent=Msa1225240-mRNA-1
chr8_1 exon 90576289 90576429 90576289 ID=Msa1225240-mRNA-1:exon:32970;Parent=Msa1225240-mRNA-1
chr8_1 exon 90576545 90576699 90576545 ID=Msa1225240-mRNA-1:exon:32969;Parent=Msa1225240-mRNA-1
chr8_1 exon 90578184 90578255 90578184 ID=Msa1225240-mRNA-1:exon:32968;Parent=Msa1225240-mRNA-1
chr8_1 exon 90578467 90578563 90578467 ID=Msa1225240-mRNA-1:exon:32967;Parent=Msa1225240-mRNA-1
chr8_1 exon 90579094 90579194 90579094 ID=Msa1225240-mRNA-1:exon:32966;Parent=Msa1225240-mRNA-1
chr8_1 exon 90579312 90579356 90579312 ID=Msa1225240-mRNA-1:exon:32965;Parent=Msa1225240-mRNA-1
chr8_1 exon 90579731 90579793 90579731 ID=Msa1225240-mRNA-1:exon:32964;Parent=Msa1225240-mRNA-1
chr8_1 exon 90580201 90580266 90580201 ID=Msa1225240-mRNA-1:exon:32963;Parent=Msa1225240-mRNA-1
chr8_1 exon 90580399 90580455 90580399 ID=Msa1225240-mRNA-1:exon:32962;Parent=Msa1225240-mRNA-1
chr8_1 exon 90581486 90581572 90581486 ID=Msa1225240-mRNA-1:exon:32961;Parent=Msa1225240-mRNA-1
chr8_1 exon 90581865 90582384 90581865 ID=Msa1225240-mRNA-1:exon:32960;Parent=Msa1225240-mRNA-1
chr8_1 five_prime_UTR 90582276 90582384 90582276 ID=Msa1225240-mRNA-1:five_prime_utr;Parent=Msa1225240-mRNA-1
chr8_1 CDS 90581865 90582275 90581865 ID=Msa1225240-mRNA-1:cds;Parent=Msa1225240-mRNA-1
chr8_1 CDS 90581486 90581572 90581486 ID=Msa1225240-mRNA-1:cds;Parent=Msa1225240-mRNA-1
chr8_1 CDS 90580399 90580455 90580399 ID=Msa1225240-mRNA-1:cds;Parent=Msa1225240-mRNA-1
chr8_1 CDS 90580201 90580266 90580201 ID=Msa1225240-mRNA-1:cds;Parent=Msa1225240-mRNA-1
chr8_1 CDS 90579731 90579793 90579731 ID=Msa1225240-mRNA-1:cds;Parent=Msa1225240-mRNA-1
chr8_1 CDS 90579312 90579356 90579312 ID=Msa1225240-mRNA-1:cds;Parent=Msa1225240-mRNA-1
chr8_1 CDS 90579094 90579194 90579094 ID=Msa1225240-mRNA-1:cds;Parent=Msa1225240-mRNA-1
chr8_1 CDS 90578467 90578563 90578467 ID=Msa1225240-mRNA-1:cds;Parent=Msa1225240-mRNA-1
chr8_1 CDS 90578184 90578255 90578184 ID=Msa1225240-mRNA-1:cds;Parent=Msa1225240-mRNA-1
chr8_1 CDS 90576545 90576699 90576545 ID=Msa1225240-mRNA-1:cds;Parent=Msa1225240-mRNA-1
chr8_1 CDS 90576289 90576429 90576289 ID=Msa1225240-mRNA-1:cds;Parent=Msa1225240-mRNA-1
chr8_1 CDS 90575865 90575946 90575865 ID=Msa1225240-mRNA-1:cds;Parent=Msa1225240-mRNA-1
chr8_1 CDS 90575625 90575711 90575625 ID=Msa1225240-mRNA-1:cds;Parent=Msa1225240-mRNA-1
chr8_1 CDS 90575410 90575481 90575410 ID=Msa1225240-mRNA-1:cds;Parent=Msa1225240-mRNA-1
chr8_1 CDS 90575144 90575278 90575144 ID=Msa1225240-mRNA-1:cds;Parent=Msa1225240-mRNA-1
chr8_1 CDS 90574956 90575029 90574956 ID=Msa1225240-mRNA-1:cds;Parent=Msa1225240-mRNA-1
chr8_1 CDS 90574230 90574317 90574230 ID=Msa1225240-mRNA-1:cds;Parent=Msa1225240-mRNA-1
chr8_1 CDS 90573025 90573092 90573025 ID=Msa1225240-mRNA-1:cds;Parent=Msa1225240-mRNA-1
chr8_1 CDS 90572875 90572917 90572875 ID=Msa1225240-mRNA-1:cds;Parent=Msa1225240-mRNA-1
chr8_1 CDS 90572368 90572445 90572368 ID=Msa1225240-mRNA-1:cds;Parent=Msa1225240-mRNA-1
chr8_1 CDS 90571541 90571616 90571541 ID=Msa1225240-mRNA-1:cds;Parent=Msa1225240-mRNA-1
chr8_1 CDS 90571115 90571155 90571115 ID=Msa1225240-mRNA-1:cds;Parent=Msa1225240-mRNA-1
chr8_1 CDS 90570845 90570940 90570845 ID=Msa1225240-mRNA-1:cds;Parent=Msa1225240-mRNA-1
chr8_1 three_prime_UTR 90570469 90570844 90570469 ID=Msa1225240-mRNA-1:three_prime_utr;Parent=Msa1225240-mRNA-1
Gene Sequence

>Msa1225240

ATGGCCACGGAACTTTGTGGCGGGTCACTATTCTTATCCGTTAAAACTCAACGGTTACTCCATCATTCTCAACGAACACCAATAACCGCCACTAGATTCTTCAATTCCTCGTCCAAACCTCGCTTCACCTTTCCCCGCCGCAACTCCTCCGTCTTCTGCCGTGTTGCTACTACCAACGACACCGTCTCTAACTTCGACTCCGCCGCTAAAGATGGCCAGGATCGTCTCTCTAAGGTTCCAGTGTCGAATATACGAAACTTCTCCATCATTGCTCATATTGACCATGGGAAGTCCACGTTAGCGGATAAGTTGCTTCAGGTTACTGGTACTGTGCCGCAGAGAGAAATGAAGGAACAGTTTCTTGATAACATGGATTTAGAGAGAGAACGAGGCATCACTATTAAGCTTCAGGCAGCTCGAATGCGTTATGTGTTTGAAAATGAACCATATTGCTTAAATTTGATAGATACTCCTGGACATGTCGACTTCTCCTACGAGGTTTCTCGATCACTCGCTGCGTGTGAGGGTGCTCTCCTTGTAGTAGATGCTTCTCAGGGGGTTGAAGCGCAAACACTAGCTAATGTTTATTTAGCTTTGGATAACAACCTAGAAATTATCCCTGTTTTGAACAAAATAGATCTTCCGGGTGCAGAACCAGATCGGGTTCTCAAGGAGATTGAAGAGGTTATAGGTCTAGACTGTAGCAACGCCATTCTCTGCTCTGCAAAGGAAGGAATAGGTATAATGGACATTCTCAATGCAATTGTTGCAAGAATTCCCCCACCTGCTGATACATCAAAGAAGCCACTGAGGGCTTTAATATTTGATAGTTACTACGATCCATATAGAGGTGTTATTGTATACTTCCGAGTTGTAGATGGCACTATAAAGAAAGGCGACAGAGTTTATTTTATGGCTAGTGGTAAGGATTATTTTGCCGATGAAATTGGAGTTTTGTCTCCCAATCAACTTCAAGCTGAAGAGTTGTTTGCTGGTGAGGTGGGCTATCTATCTGCATCAATAAGAACAGTAGCTGATGCCAGAGTGGGTGACACGATCACCCACCATTTTAGAAAGGCAGACAATTCACTCCCTGGATATGAGGAAGCCACTCCTATGGTGTTCTGTGGCCTGTTTCCTATTGATGCTGACCAATTTCCCGAGCTACGAGATGCACTTGAGAAGCTTCAACTCAATGATGCTGCACTGAAGGTGGCATTATATACTTATATGCTGGAAAATAGTGCATCTTTTGTTTCAGGCATTTGGCAAGGGGAAATAATTTGCATTTTTATTTTGAACCCTGAAACCTCTAGTGCTATGGGATTTGGCTTTAGATGTGGTTTTCTGGGTCTTCTCCACATGGAAATTGTTCAGGAGAGACTTGAGAGAGAATACAATTTGAGCCTGATAACTACTGCTCCAAGTGTTGTATACAGAGTGAACTGTGCTAATGGTGATACTGTTGAATGCTCAAATCCATCTTTACTTCCTGAGCCTGGTAAAAGAAGATCAATTGAGGAGCCAGTTGTTAAGATTGAGATGCTTACGCCAAAGGACTATATTGGCCCGCTTATGGAACTGGCTCAAGAAAGAAGAGGGCAGTTCAAAGAAATGAAATTTATGAGTGAAATTAGGGCGTCGCTCACCTATGAATTACCTCTAGCTGAGATGGTTGGTGATTTCTTTGACCAGTTAAAGTCAAGAAGTAAGGGTTACGCTAGTATGGAGTATACTGTTACTGGTTACAAAGAAAGTGATTTAACTAAACTCGACATACAGATAAATGGTGAATGTGTGGAGCCATTGGCTACGATTGTGCACAGAGATAAGAATAAAAGTGTTGATGTTGTTGCTCCGTTCAAGAGGTCGTTAATTCCTATTGCTCCACCCATGAATAGATTTAATCCAGATGTTGTATTTAATAGGCAACAGTACAAGCATGCGTATTCTGTGGGAAGGGCTTTGACTCTAAAGTTGAAGGAGCTCATACCACGGCAAATGTTTAAAATACCAATTCAAGCATGCATAGGAGCTAAAGTGATTGCTAGTGAATCTTTATCTGCAATAAGGAAAGATGTATTAGCCAAATGCTACGGTGGGGACATTACGAGAAAAAAGAAACTGCTTAAGAAACAGGCTGAAGGAAAGAAGAGAATGAAATCAATTGGTAAAGTTGATGTGCCTCAAGAAGCCTTTATGGCAGTTCTGAAACTTGAAAAGGAGGTACTCTGA
Protein sequence

>Msa1225240

MATELCGGSLFLSVKTQRLLHHSQRTPITATRFFNSSSKPRFTFPRRNSSVFCRVATTNDTVSNFDSAAKDGQDRLSKVPVSNIRNFSIIAHIDHGKSTLADKLLQVTGTVPQREMKEQFLDNMDLERERGITIKLQAARMRYVFENEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALDNNLEIIPVLNKIDLPGAEPDRVLKEIEEVIGLDCSNAILCSAKEGIGIMDILNAIVARIPPPADTSKKPLRALIFDSYYDPYRGVIVYFRVVDGTIKKGDRVYFMASGKDYFADEIGVLSPNQLQAEELFAGEVGYLSASIRTVADARVGDTITHHFRKADNSLPGYEEATPMVFCGLFPIDADQFPELRDALEKLQLNDAALKVALYTYMLENSASFVSGIWQGEIICIFILNPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITTAPSVVYRVNCANGDTVECSNPSLLPEPGKRRSIEEPVVKIEMLTPKDYIGPLMELAQERRGQFKEMKFMSEIRASLTYELPLAEMVGDFFDQLKSRSKGYASMEYTVTGYKESDLTKLDIQINGECVEPLATIVHRDKNKSVDVVAPFKRSLIPIAPPMNRFNPDVVFNRQQYKHAYSVGRALTLKLKELIPRQMFKIPIQACIGAKVIASESLSAIRKDVLAKCYGGDITRKKKLLKKQAEGKKRMKSIGKVDVPQEAFMAVLKLEKEVL*