AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1257860

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1257860 MtrunA17_Chr4g0056591 97.561 779 19 0 1 779 1 779 0.0 1565
Msa1257860 MtrunA17_Chr7g0231931 42.473 744 409 9 41 770 2 740 0.0 585
Msa1257860 MtrunA17_Chr2g0286711 42.525 689 365 10 89 770 52 716 7.03e-176 522
Msa1257860 MtrunA17_Chr4g0056581 74.603 126 31 1 456 581 2 126 7.15e-57 191
Msa1257860 MtrunA17_Chr4g0056571 69.014 142 38 1 632 773 1 136 4.94e-56 188
Msa1257860 MtrunA17_Chr2g0291831 34.872 390 205 13 69 439 56 415 1.67e-52 190
Msa1257860 MtrunA17_Chr2g0291331 32.376 383 211 12 93 444 29 394 1.13e-48 179
Msa1257860 MtrunA17_Chr2g0291811 33.333 333 203 8 148 474 86 405 4.36e-43 162
Msa1257860 MtrunA17_Chr2g0311941 24.941 842 435 26 79 763 5 806 2.02e-42 166
Msa1257860 MtrunA17_Chr3g0082331 27.869 366 238 9 145 487 102 464 2.40e-41 158
Msa1257860 MtrunA17_Chr2g0291321 30.065 306 164 5 93 348 78 383 4.11e-37 144
Msa1257860 MtrunA17_Chr2g0291381 30.928 291 170 4 88 348 4 293 1.02e-36 140
Msa1257860 MtrunA17_Chr4g0025761 29.467 319 194 8 145 438 100 412 2.79e-35 139
Msa1257860 MtrunA17_Chr2g0291361 28.797 316 166 4 88 348 4 315 5.52e-34 132
Msa1257860 MtrunA17_Chr2g0310991 33.333 165 105 2 207 366 3 167 3.80e-29 115
Msa1257860 MtrunA17_Chr6g0459191 29.839 248 155 6 207 438 3 247 8.68e-29 117
Msa1257860 MtrunA17_Chr8g0391041 27.532 316 184 10 207 488 3 307 1.59e-26 110
Msa1257860 MtrunA17_Chr1g0173551 37.799 209 119 5 24 224 7 212 2.26e-25 112
Msa1257860 MtrunA17_Chr4g0065151 22.042 803 475 24 93 763 140 923 4.41e-25 112
Msa1257860 MtrunA17_Chr2g0291391 27.703 296 160 7 93 336 35 328 3.81e-23 101
Msa1257860 MtrunA17_Chr4g0066951 39.098 133 81 0 90 222 12 144 7.79e-23 104
Msa1257860 MtrunA17_Chr4g0040791 35.326 184 112 3 38 221 4 180 2.24e-22 102
Msa1257860 MtrunA17_Chr2g0311931 25.904 498 290 17 353 777 332 823 3.07e-21 99.4
Msa1257860 MtrunA17_Chr2g0311931 37.500 160 81 3 79 221 5 162 1.27e-19 94.4
Msa1257860 MtrunA17_Chr1g0170011 25.800 469 270 16 353 750 332 793 2.00e-20 96.7
Msa1257860 MtrunA17_Chr1g0170011 37.500 160 81 3 79 221 5 162 1.35e-19 94.0
Msa1257860 MtrunA17_Chr8g0391571 33.000 200 121 6 294 487 9 201 2.21e-19 87.4
Msa1257860 MtrunA17_Chr2g0291351 30.688 189 125 5 158 343 4 189 5.81e-19 85.9
Msa1257860 MtrunA17_Chr2g0291421 30.726 179 94 4 70 225 34 205 1.40e-18 85.9
Msa1257860 MtrunA17_Chr3g0130991 33.889 180 98 4 63 224 40 216 2.25e-18 89.7
Msa1257860 MtrunA17_Chr7g0216911 28.837 215 125 6 35 225 2 212 2.39e-16 83.6
Msa1257860 MtrunA17_Chr2g0311061 32.727 110 70 1 207 312 3 112 2.59e-16 76.3
Msa1257860 MtrunA17_Chr2g0287231 31.387 137 82 4 91 220 12 143 1.52e-11 65.1
Msa1257860 MtrunA17_Chr2g0318291 29.697 165 94 5 90 232 7 171 1.85e-11 64.7
Msa1257860 MtrunA17_Chr7g0259481 26.168 214 128 6 11 220 3 190 2.47e-11 66.6
Msa1257860 MtrunA17_Chr2g0310931 28.972 107 73 2 207 312 3 107 9.71e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1257860 AT1G62750.1 85.732 785 104 4 1 779 1 783 0.0 1346
Msa1257860 AT2G45030.1 43.995 741 394 10 45 770 9 743 0.0 592
Msa1257860 AT1G45332.1 43.725 741 396 10 45 770 9 743 0.0 590
Msa1257860 AT1G45332.2 42.049 566 321 6 207 770 3 563 6.57e-149 448
Msa1257860 AT1G56070.3 25.275 819 435 28 79 750 5 793 4.21e-41 162
Msa1257860 AT1G56070.2 25.275 819 435 28 79 750 5 793 4.21e-41 162
Msa1257860 AT1G56070.1 25.275 819 435 28 79 750 5 793 4.21e-41 162
Msa1257860 AT3G12915.2 24.691 810 453 29 79 777 5 768 8.65e-34 139
Msa1257860 AT1G06220.1 22.893 795 469 26 93 760 139 916 7.59e-29 124
Msa1257860 AT1G06220.3 22.893 795 469 26 93 760 139 916 7.59e-29 124
Msa1257860 AT1G06220.2 22.893 795 469 26 93 760 139 916 7.59e-29 124
Msa1257860 AT5G25230.2 22.930 785 481 24 93 760 125 902 6.45e-28 121
Msa1257860 AT5G25230.1 22.930 785 481 24 93 760 125 902 6.45e-28 121
Msa1257860 AT2G31060.2 37.037 162 90 3 93 248 60 215 1.58e-23 106
Msa1257860 AT5G13650.1 36.842 190 103 5 43 224 32 212 1.58e-22 103
Msa1257860 AT5G13650.2 39.362 188 102 6 43 224 32 213 2.32e-22 103
Msa1257860 AT2G31060.3 36.145 166 90 4 93 248 60 219 1.05e-21 100
Msa1257860 AT3G22980.1 37.594 133 83 0 90 222 7 139 4.59e-21 99.4
Msa1257860 AT3G22980.3 37.594 133 83 0 90 222 7 139 4.59e-21 99.4
Msa1257860 AT3G22980.2 37.594 133 83 0 90 222 7 139 4.59e-21 99.4
Msa1257860 AT5G39900.1 34.014 147 85 2 88 225 62 205 7.67e-19 91.7
Msa1257860 AT5G08650.2 38.194 144 78 3 87 224 81 219 1.60e-17 87.4
Msa1257860 AT5G08650.1 38.194 144 78 3 87 224 81 219 1.71e-17 87.4
Msa1257860 AT4G20360.1 30.108 186 115 5 39 222 36 208 3.21e-11 67.0
Msa1257860 AT4G20360.2 30.108 186 115 5 39 222 36 208 3.21e-11 67.0

Find 231 sgRNAs with CRISPR-Local

Find 411 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCTGCAACCACCACTTTC+TGG 0.095469 8_2:-58843567 Msa1257860:CDS
GGCTTACTTCATTTAATTTC+TGG 0.112301 8_2:-58840630 Msa1257860:three_prime_UTR
ACTGAGAAATTTCTCCTTCT+TGG 0.130938 8_2:+58845688 None:intergenic
ATACCTCACTTCATGGATTT+TGG 0.131797 8_2:+58841859 None:intergenic
ATCCTCTCTATTGTTGCTTC+TGG 0.134545 8_2:+58842875 None:intergenic
TCGTCTCAAAAGAGAATTTA+AGG 0.150654 8_2:-58842369 Msa1257860:intron
TTTCTTCCATGAATTGTTAT+TGG 0.190826 8_2:-58840802 Msa1257860:three_prime_UTR
GTCAATATCAGCTTTAGTTT+TGG 0.199047 8_2:+58842517 None:intergenic
ACAACTTCAACTTTCATTAT+AGG 0.203073 8_2:+58841512 None:intergenic
TCTTCTATCCCTTTGGTGTT+TGG 0.206307 8_2:+58845921 None:intergenic
TCTTTCTCCACTTCGTTTCA+TGG 0.207665 8_2:-58845812 Msa1257860:CDS
CTTCTATCCCTTTGGTGTTT+GGG 0.211468 8_2:+58845922 None:intergenic
TACAGATGTTTAAATAACTA+TGG 0.227541 8_2:+58840712 None:intergenic
AAGATCAATAACTCCCTTAA+AGG 0.228567 8_2:+58843249 None:intergenic
TGGTGCAGAAGATTCCTTTA+AGG 0.240766 8_2:-58843263 Msa1257860:CDS
TAGAAGTGGAGCGTGCTCTT+AGG 0.250672 8_2:-58843492 Msa1257860:CDS
AGACATGATAGTGACAAATT+TGG 0.252597 8_2:-58843317 Msa1257860:CDS
GTTACTCCTGAAGAACATTT+AGG 0.259112 8_2:-58841491 Msa1257860:CDS
GGGGATATTGTTGCTCTTGC+TGG 0.261376 8_2:-58842644 Msa1257860:CDS
GACGTTAAAGTAGCTTTAAC+AGG 0.262110 8_2:-58842665 Msa1257860:CDS
TACATTCCCGGGGTTGTTAA+AGG 0.275534 8_2:-58841710 Msa1257860:CDS
TAGGCTCCCTTACATTTGTT+AGG 0.276039 8_2:-58842793 Msa1257860:CDS
TCTTCGTTATCACAATTCTT+TGG 0.277896 8_2:-58845748 Msa1257860:CDS
TCCTCTCTATTGTTGCTTCT+GGG 0.288948 8_2:+58842876 None:intergenic
ACTGGAAGGAACTACAAAAT+TGG 0.295711 8_2:-58843661 Msa1257860:CDS
AAAAGCATTCAGAAGGAAAA+AGG 0.297493 8_2:-58840834 Msa1257860:three_prime_UTR
CATCTGGTTCAACTCCTTCT+AGG 0.298517 8_2:+58843071 None:intergenic
ATTTGTCCAATAACAATTCA+TGG 0.299262 8_2:+58840796 None:intergenic
TGTGCACATACCTCACTTCA+TGG 0.304729 8_2:+58841852 None:intergenic
ACCCCGGGAATGTATTCTTT+TGG 0.311643 8_2:+58841719 None:intergenic
TTCTTCTCCACCCCAAACTA+TGG 0.314805 8_2:+58843213 None:intergenic
ACATCTCCTAAATGTTCTTC+AGG 0.320044 8_2:+58841485 None:intergenic
TGTCACCAAAACTATTGATT+TGG 0.327285 8_2:+58841435 None:intergenic
CAATTCAAACAAAGGGAAAA+AGG 0.328267 8_2:-58842732 Msa1257860:CDS
GAACATTTAGGAGATGTAAT+TGG 0.332221 8_2:-58841479 Msa1257860:CDS
TTAAAAGCTAGTCCAGAAAA+TGG 0.332936 8_2:+58842836 None:intergenic
TGCTGCAACCACCACTTTCT+GGG 0.336485 8_2:-58843566 Msa1257860:CDS
TGCTTGTTTGACAGTGTTGC+TGG 0.345092 8_2:-58843451 Msa1257860:CDS
ATCATGAGTGATTCATTTGT+AGG 0.353963 8_2:-58842812 Msa1257860:CDS
AGAGGCCAAATCAATAGTTT+TGG 0.355381 8_2:-58841440 Msa1257860:CDS
TTAGGATGAAAGCCATAGTT+TGG 0.363837 8_2:-58843225 Msa1257860:CDS
GCAATCTTAATCACAGGATC+AGG 0.363993 8_2:+58842548 None:intergenic
TGCTTTCCCTGTAGTTTACT+TGG 0.369644 8_2:+58841885 None:intergenic
AGGGAGTTATTGATCTTGTT+AGG 0.371142 8_2:-58843243 Msa1257860:CDS
AAGAGCACGCTCCACTTCTA+AGG 0.371177 8_2:+58843495 None:intergenic
GGTGCAGAAGATTCCTTTAA+GGG 0.374622 8_2:-58843262 Msa1257860:CDS
AAGCTCCTCTTGCTGCCAAC+TGG 0.377137 8_2:+58841576 None:intergenic
AGAGCTTTCTTCTATCCCTT+TGG 0.379875 8_2:+58845914 None:intergenic
TCAGGGTCAGTACCCTTCAT+TGG 0.383227 8_2:+58842902 None:intergenic
CTCATCATCTAACTCAACTA+TGG 0.387664 8_2:+58843108 None:intergenic
GACATGATAGTGACAAATTT+GGG 0.389329 8_2:-58843316 Msa1257860:CDS
TCTCCTTCTTGGAGCAAGCT+GGG 0.389568 8_2:+58845699 None:intergenic
TTCTCCTTCTTGGAGCAAGC+TGG 0.390148 8_2:+58845698 None:intergenic
CTCCACACAGTTTCTGATTG+TGG 0.390511 8_2:+58843421 None:intergenic
TAGGATGAAAGCCATAGTTT+GGG 0.391473 8_2:-58843224 Msa1257860:CDS
GTGTATGAGCAATGGTGTTC+TGG 0.396149 8_2:-58841678 Msa1257860:CDS
GAACGGATTCTCTTCTATAC+TGG 0.396772 8_2:-58843679 Msa1257860:CDS
GAAAGGCACAGAGGAGAAAC+TGG 0.398567 8_2:+58845950 None:intergenic
TCACTATCATGTCTCTTGTT+CGG 0.400543 8_2:+58843326 None:intergenic
CTCAAGCACGACCGGACTCT+CGG 0.409409 8_2:+58842583 None:intergenic
AGAAGTGGAGCGTGCTCTTA+GGG 0.409951 8_2:-58843491 Msa1257860:CDS
GTTCCAAAAGAATACATTCC+CGG 0.421525 8_2:-58841722 Msa1257860:CDS
TCAAGCACGACCGGACTCTC+GGG 0.424335 8_2:+58842584 None:intergenic
TACTCTGGAAAGCTAACTGC+TGG 0.428886 8_2:-58842767 Msa1257860:CDS
GAAAGTAAGGCGTTTAAACT+TGG 0.429015 8_2:-58840747 Msa1257860:three_prime_UTR
GCAAAAGAACGGGATTGTAC+TGG 0.434589 8_2:+58845775 None:intergenic
CTTGTACTTCAACTACCAAT+TGG 0.434648 8_2:-58843283 Msa1257860:CDS
AGGTTCAAGCATTCTCGGTC+CGG 0.435323 8_2:+58841532 None:intergenic
AGGCTCCCTTACATTTGTTA+GGG 0.436453 8_2:-58842792 Msa1257860:CDS
AACCGTACGGTTCGAACCGA+TGG 0.439730 8_2:-58841792 Msa1257860:CDS
AAGGAATCTTCTGCACCAAT+TGG 0.440601 8_2:+58843268 None:intergenic
TTCTGCATAATGTATTTCCT+TGG 0.443296 8_2:-58840983 Msa1257860:exon
TACATCGACAACTGGAAATC+CGG 0.444027 8_2:+58841655 None:intergenic
CCACTTCGTTTCATGGCCAC+AGG 0.449471 8_2:-58845805 Msa1257860:CDS
TCAGACAGTGATTGAAGGAA+TGG 0.455007 8_2:-58842420 Msa1257860:CDS
GGAAGATAACCCTCATGGTT+AGG 0.456619 8_2:+58840957 None:intergenic
TCCCGGGGTTGTTAAAGGAT+TGG 0.460880 8_2:-58841705 Msa1257860:CDS
GCTTTCCCTGTAGTTTACTT+GGG 0.464760 8_2:+58841886 None:intergenic
AGTACACCCTAACAAATGTA+AGG 0.467383 8_2:+58842786 None:intergenic
TCCAATCCTTTAACAACCCC+GGG 0.467473 8_2:+58841704 None:intergenic
CTCCTTCTTGGAGCAAGCTG+GGG 0.469003 8_2:+58845700 None:intergenic
TGAGTTAGATGATGAGGCTA+TGG 0.470860 8_2:-58843101 Msa1257860:CDS
TTGGTGTTTGGGATAAAGAA+AGG 0.470916 8_2:+58845933 None:intergenic
GTGCTCCCCAAGTAAACTAC+AGG 0.472000 8_2:-58841892 Msa1257860:CDS
CGAAGAAGAAGCAAAAGAAC+GGG 0.472640 8_2:+58845765 None:intergenic
TCCGGTCGTGCTTGAGCGGA+TGG 0.474167 8_2:-58842576 Msa1257860:CDS
TGGCACAAAAGTGGCTGCTA+TGG 0.475886 8_2:+58843015 None:intergenic
ATTATAGGTTCAAGCATTCT+CGG 0.476541 8_2:+58841527 None:intergenic
GGTTTGAAAGATACTATAAC+AGG 0.478716 8_2:-58842623 Msa1257860:CDS
GTTGTGTGACCCCGAGAGTC+CGG 0.479820 8_2:-58842594 Msa1257860:CDS
ACTTGACGTACCACCAATGA+AGG 0.484967 8_2:-58842915 Msa1257860:CDS
GTCAATAAAATGGACCGCCT+TGG 0.486422 8_2:-58843361 Msa1257860:CDS
TTCCATCGGTTCGAACCGTA+CGG 0.491150 8_2:+58841790 None:intergenic
TGACTTACCTTGAGTCCACC+TGG 0.492845 8_2:+58841410 None:intergenic
TTCCAAAAGAATACATTCCC+GGG 0.493139 8_2:-58841721 Msa1257860:CDS
GTTTGACAGTGTTGCTGGTG+TGG 0.493303 8_2:-58843446 Msa1257860:CDS
TGGAGGCAAGCTGATAGATA+TGG 0.495619 8_2:-58843403 Msa1257860:CDS
ATGTTGCGATAATCTTTCAA+TGG 0.495740 8_2:+58843745 None:intergenic
TTCCAATCCTTTAACAACCC+CGG 0.496448 8_2:+58841703 None:intergenic
TTGAAATGATTCTGCAGCCA+TGG 0.497945 8_2:+58845888 None:intergenic
ACTGCACGTACATCGACAAC+TGG 0.499067 8_2:+58841647 None:intergenic
ATAAATCAGACAGTGATTGA+AGG 0.499594 8_2:-58842425 Msa1257860:CDS
TTATCGCAACATTGGTATCA+TGG 0.501102 8_2:-58843734 Msa1257860:CDS
GCTATGGAGAACTACCTAGA+AGG 0.504057 8_2:-58843085 Msa1257860:CDS
GGAGCGTGCTCTTAGGGTGC+TGG 0.504827 8_2:-58843485 Msa1257860:CDS
CAGACAGTGATTGAAGGAAT+GGG 0.506089 8_2:-58842419 Msa1257860:CDS
TTCTTTATCCCAAACACCAA+AGG 0.507391 8_2:-58845930 Msa1257860:five_prime_UTR
ATGTACTCAATTCAAACAAA+GGG 0.507638 8_2:-58842739 Msa1257860:CDS
AACATAATACAAGTATCAAA+AGG 0.508215 8_2:+58840936 None:intergenic
ATCTGCAGGTATATCTTCAT+AGG 0.508832 8_2:+58843174 None:intergenic
CTTTCCCTGTAGTTTACTTG+GGG 0.509764 8_2:+58841887 None:intergenic
TCCATCCGCTCAAGCACGAC+CGG 0.511314 8_2:+58842575 None:intergenic
CTGATTTATCTCTTCATCAC+GGG 0.514996 8_2:+58842439 None:intergenic
TAAAGCTGATATTGACAAGA+TGG 0.515624 8_2:-58842510 Msa1257860:CDS
TATTGACAAAACAAATTCGC+GGG 0.516620 8_2:+58843377 None:intergenic
GGGTCAGTACCCTTCATTGG+TGG 0.517101 8_2:+58842905 None:intergenic
CGAAGTGGAGAAAGAAGGGT+TGG 0.518379 8_2:+58845820 None:intergenic
TCACGGGAGAAGTGGAAAGA+AGG 0.518593 8_2:+58842455 None:intergenic
TGGAGCAAGCTGGGGTGAAG+TGG 0.520243 8_2:+58845708 None:intergenic
TCTTTATCCCAAACACCAAA+GGG 0.520787 8_2:-58845929 Msa1257860:five_prime_UTR
TATCCACTGCCTGGTTCCAT+CGG 0.521586 8_2:+58841776 None:intergenic
TCAATTGCAATCTTAATCAC+AGG 0.522182 8_2:+58842542 None:intergenic
GAACCGATGGAACCAGGCAG+TGG 0.524162 8_2:-58841779 Msa1257860:CDS
GATATTGACAAGATGGCAGC+TGG 0.524749 8_2:-58842503 Msa1257860:CDS
ACCTGCAGATCTCCTAGAGC+AGG 0.524880 8_2:-58843161 Msa1257860:CDS
CTACGGCATCTAACAATGGT+TGG 0.526975 8_2:+58842957 None:intergenic
GCCTGCTCTAGGAGATCTGC+AGG 0.530064 8_2:+58843160 None:intergenic
TATATCTTCATAGGTAAACT+TGG 0.533663 8_2:+58843183 None:intergenic
CGGGAAGGAATAAGAAAAGC+CGG 0.534718 8_2:-58841551 Msa1257860:CDS
CAAAAGAACGGGATTGTACT+GGG 0.536374 8_2:+58845776 None:intergenic
ATCAACATCATTGATACTCC+TGG 0.537310 8_2:-58843532 Msa1257860:CDS
TTGAATTCATATCCACTGCC+TGG 0.537323 8_2:+58841767 None:intergenic
CAGTATGTCAGTACACTAAG+AGG 0.538521 8_2:-58841105 Msa1257860:CDS
TGTAATCTTGAGCCTGCTCT+AGG 0.539505 8_2:+58843149 None:intergenic
GGATATATGAGCTAAAATGT+TGG 0.540316 8_2:-58846017 None:intergenic
CGTGCTCTTAGGGTGCTGGA+TGG 0.540699 8_2:-58843481 Msa1257860:CDS
ACAGATGTTTAAATAACTAT+GGG 0.541232 8_2:+58840713 None:intergenic
TTGAAAGATTATCGCAACAT+TGG 0.541603 8_2:-58843742 Msa1257860:CDS
CACCCCAGCTTGCTCCAAGA+AGG 0.542043 8_2:-58845702 Msa1257860:CDS
TGTTGACTTCACCTTAGAAG+TGG 0.543999 8_2:-58843506 Msa1257860:CDS
CGGTTCGAACCGATGGAACC+AGG 0.546258 8_2:-58841785 Msa1257860:CDS
GTTTGGGGTGGAGAAGAACT+TGG 0.546516 8_2:-58843208 Msa1257860:CDS
TGGAGAGGTGCATGAGGGAA+CGG 0.546902 8_2:-58843641 Msa1257860:CDS
TCTCTTCATCACGGGAGAAG+TGG 0.550210 8_2:+58842447 None:intergenic
TCTTCACTCTGTAATCTCAA+TGG 0.551066 8_2:-58845856 Msa1257860:CDS
CGATGTACGTGCAGTACTTG+TGG 0.554163 8_2:-58841639 Msa1257860:CDS
TGAAACGAAGTGGAGAAAGA+AGG 0.555195 8_2:+58845815 None:intergenic
TGGTTTAGTCAAGCTTGCAC+AGG 0.555326 8_2:-58842483 Msa1257860:CDS
ATGCAGGTTGAAGCTAATGT+TGG 0.556625 8_2:-58841914 Msa1257860:intron
ACATTTGTTAGGGTGTACTC+TGG 0.556805 8_2:-58842782 Msa1257860:CDS
TATGTACTCAATTCAAACAA+AGG 0.558763 8_2:-58842740 Msa1257860:CDS
ATGTTCATTCTGAATGATGT+TGG 0.560282 8_2:-58840651 Msa1257860:three_prime_UTR
GCTTTCCAGTTGGCAGCAAG+AGG 0.561969 8_2:-58841581 Msa1257860:CDS
CCTTGGTATCCTAACCATGA+GGG 0.564508 8_2:-58840966 Msa1257860:three_prime_UTR
CATACCCTCTGGAGTGGACA+TGG 0.564625 8_2:+58845660 None:intergenic
ACACTAAGAGGGATGACAAA+GGG 0.569387 8_2:-58841093 Msa1257860:CDS
AGGGAACGGCAACAATGGAC+TGG 0.569874 8_2:-58843627 Msa1257860:CDS
GGTGGTTGCAGCAGAAGTAA+TGG 0.572161 8_2:+58843576 None:intergenic
AACGGCAACAATGGACTGGA+TGG 0.572185 8_2:-58843623 Msa1257860:CDS
GCATGAGGGAACGGCAACAA+TGG 0.573114 8_2:-58843632 Msa1257860:CDS
CATAGTTGAGTTAGATGATG+AGG 0.574570 8_2:-58843107 Msa1257860:CDS
ATGAGCAATGGTGTTCTGGC+CGG 0.574875 8_2:-58841674 Msa1257860:CDS
AAGTGTGTTGGCTTTCCAGT+TGG 0.575702 8_2:-58841591 Msa1257860:CDS
TACTGAAACATCTCAGCAAG+AGG 0.576993 8_2:+58841123 None:intergenic
CAAAAGGAAGATAACCCTCA+TGG 0.578735 8_2:+58840952 None:intergenic
AGAGTCCGGTCGTGCTTGAG+CGG 0.579358 8_2:-58842580 Msa1257860:CDS
TTCATTGGTGGTACGTCAAG+TGG 0.579646 8_2:+58842917 None:intergenic
CCACTTTCTGGGATAAGCAC+AGG 0.580580 8_2:-58843555 Msa1257860:CDS
CCCTCATGGTTAGGATACCA+AGG 0.580950 8_2:+58840966 None:intergenic
ACGAAGAAGAAGCAAAAGAA+CGG 0.581099 8_2:+58845764 None:intergenic
TGGAACAAGAACAAGAAAGA+GGG 0.586012 8_2:-58843603 Msa1257860:CDS
CAAAATTGGAGAGGTGCATG+AGG 0.587392 8_2:-58843647 Msa1257860:CDS
ATGGAACAAGAACAAGAAAG+AGG 0.587836 8_2:-58843604 Msa1257860:CDS
GAAACGAAGTGGAGAAAGAA+GGG 0.590389 8_2:+58845816 None:intergenic
TCTGATTTATCTCTTCATCA+CGG 0.591410 8_2:+58842438 None:intergenic
ATTGGTAGTTGAAGTACAAG+TGG 0.593192 8_2:+58843286 None:intergenic
GGTGGTACGTCAAGTGGTGA+TGG 0.596795 8_2:+58842923 None:intergenic
TTCGCCATGTCCACTCCAGA+GGG 0.597462 8_2:-58845664 Msa1257860:intron
ACACAACACTGGCACAAAAG+TGG 0.597638 8_2:+58843006 None:intergenic
TTATTGACAAAACAAATTCG+CGG 0.599109 8_2:+58843376 None:intergenic
TTTCGCCATGTCCACTCCAG+AGG 0.599867 8_2:-58845665 Msa1257860:CDS
TTGAGGAACCACATCAAACA+TGG 0.602289 8_2:+58841044 None:intergenic
ATCATGGCTCACATAGACGC+TGG 0.605107 8_2:-58843718 Msa1257860:CDS
CACGGGAGAAGTGGAAAGAA+GGG 0.605278 8_2:+58842456 None:intergenic
CAATCTTAATCACAGGATCA+GGG 0.605440 8_2:+58842549 None:intergenic
TGATGTAGATTCAAGTGTGT+TGG 0.605570 8_2:-58841603 Msa1257860:CDS
GCAATTAGCCATGTTTGATG+TGG 0.606338 8_2:-58841052 Msa1257860:CDS
CATGGCTAATTGCATAGAGT+AGG 0.606540 8_2:+58841062 None:intergenic
GGCTGCAGAATCATTTCAAG+TGG 0.607115 8_2:-58845884 Msa1257860:CDS
GAAATACATACCCTCTGGAG+TGG 0.610416 8_2:+58845654 None:intergenic
TGACAAACCAGGTGGACTCA+AGG 0.612807 8_2:-58841417 Msa1257860:intron
AAAGCTGATCCACACAACAC+TGG 0.616813 8_2:+58842995 None:intergenic
AAGGTGAAGTCAACATGACC+AGG 0.620892 8_2:+58843514 None:intergenic
GGTGATCTCAACTCAAGAAG+AGG 0.624392 8_2:-58841458 Msa1257860:CDS
TCCTTGGTATCCTAACCATG+AGG 0.624964 8_2:-58840967 Msa1257860:three_prime_UTR
CGTTAAAGTAGCTTTAACAG+GGG 0.625103 8_2:-58842663 Msa1257860:CDS
ACCATTGTTAGATGCCGTAG+TGG 0.627521 8_2:-58842954 Msa1257860:CDS
CAAGCACGACCGGACTCTCG+GGG 0.629713 8_2:+58842585 None:intergenic
ACACACTTGAATCTACATCA+TGG 0.630754 8_2:+58841606 None:intergenic
TTCAAGAGTGAAATCAAAGG+AGG 0.635596 8_2:-58841749 Msa1257860:CDS
ACCCAGAAGCAACAATAGAG+AGG 0.635662 8_2:-58842877 Msa1257860:CDS
ATGAAAGCCATAGTTTGGGG+TGG 0.637080 8_2:-58843220 Msa1257860:CDS
GGATTCTCTTCTATACTGGA+AGG 0.638126 8_2:-58843675 Msa1257860:CDS
TTGTACTGGGCGAAAACCTG+TGG 0.640635 8_2:+58845789 None:intergenic
AGTATGTCAGTACACTAAGA+GGG 0.642708 8_2:-58841104 Msa1257860:CDS
CCTGTGGCCATGAAACGAAG+TGG 0.645489 8_2:+58845805 None:intergenic
ACGTTAAAGTAGCTTTAACA+GGG 0.645786 8_2:-58842664 Msa1257860:CDS
TCCACTACGGCATCTAACAA+TGG 0.646726 8_2:+58842953 None:intergenic
AGTTGATTCTGAATGTGTTG+AGG 0.647718 8_2:+58841027 None:intergenic
CCTGTGCTTATCCCAGAAAG+TGG 0.649345 8_2:+58843555 None:intergenic
GAAAGACAACTACAACTGAA+CGG 0.652152 8_2:-58843696 Msa1257860:CDS
CACAATCAGAAACTGTGTGG+AGG 0.653249 8_2:-58843420 Msa1257860:CDS
GTACACCCTAACAAATGTAA+GGG 0.653327 8_2:+58842787 None:intergenic
TAGAAGAAAGCTCTAAACCA+TGG 0.653494 8_2:-58845905 Msa1257860:exon
ACTCTGGAAAGCTAACTGCT+GGG 0.660200 8_2:-58842766 Msa1257860:CDS
TTTCCAAAATCCATGAAGTG+AGG 0.662062 8_2:-58841862 Msa1257860:CDS
TACACTAAGAGGGATGACAA+AGG 0.664178 8_2:-58841094 Msa1257860:CDS
AAAATTGGAGAGGTGCATGA+GGG 0.664370 8_2:-58843646 Msa1257860:CDS
AGGATGAAAGCCATAGTTTG+GGG 0.664796 8_2:-58843223 Msa1257860:CDS
CTTGACGTACCACCAATGAA+GGG 0.671815 8_2:-58842914 Msa1257860:CDS
TCCAAAAGAATACATTCCCG+GGG 0.672083 8_2:-58841720 Msa1257860:CDS
GAATTCAAGAGTGAAATCAA+AGG 0.672516 8_2:-58841752 Msa1257860:CDS
GTGCTTATCCCAGAAAGTGG+TGG 0.672529 8_2:+58843558 None:intergenic
TTGGAAGAGTGTATGAGCAA+TGG 0.673468 8_2:-58841686 Msa1257860:CDS
TGCTCCCCAAGTAAACTACA+GGG 0.676266 8_2:-58841891 Msa1257860:CDS
AGTTTGCAGATATAACCGTA+CGG 0.678410 8_2:-58841805 Msa1257860:CDS
TGATGGTAGATAATCCACTA+CGG 0.689328 8_2:+58842940 None:intergenic
AGCCACAATCAGAAACTGTG+TGG 0.697529 8_2:-58843423 Msa1257860:CDS
GTACGTGCAGTACTTGTGGA+TGG 0.703027 8_2:-58841635 Msa1257860:CDS
AAGGAACTACAAAATTGGAG+AGG 0.709328 8_2:-58843656 Msa1257860:CDS
TGGGATAAAGAAAGGCACAG+AGG 0.753284 8_2:+58845941 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCAATAACAATTTTAAAAA+TGG + chr8_2:58845348-58845367 None:intergenic 10.0%
!!! TTGTTGTATATTTATTTTTT+TGG - chr8_2:58845837-58845856 Msa1257860:CDS 10.0%
!!! TGTTGTATATTTATTTTTTT+GGG - chr8_2:58845838-58845857 Msa1257860:CDS 10.0%
!! ATCTATTAATATAAATTCGT+TGG - chr8_2:58841045-58841064 Msa1257860:CDS 15.0%
!! ATATAATTCAATGTGATTAT+AGG + chr8_2:58841363-58841382 None:intergenic 15.0%
!! TACATACTATAAATTTAGTT+TGG - chr8_2:58841539-58841558 Msa1257860:CDS 15.0%
!!! TTAATTCACTAAGATTTTTT+TGG + chr8_2:58842206-58842225 None:intergenic 15.0%
!!! AATTTGTTTTGTCAATAAAA+TGG - chr8_2:58843238-58843257 Msa1257860:CDS 15.0%
!! CAACTATAAAAAAATTAATC+AGG - chr8_2:58843564-58843583 Msa1257860:CDS 15.0%
!! TATAAAAAAATTAATCAGGA+AGG - chr8_2:58843568-58843587 Msa1257860:CDS 15.0%
!! ATAAAAAAATTAATCAGGAA+GGG - chr8_2:58843569-58843588 Msa1257860:CDS 15.0%
!! TTAAGGTTATAATCATTATT+TGG - chr8_2:58844257-58844276 Msa1257860:intron 15.0%
!! AAGAAACTTATCATATAAAA+GGG + chr8_2:58844548-58844567 None:intergenic 15.0%
!!! TTTTATATGATAAGTTTCTT+GGG - chr8_2:58844548-58844567 Msa1257860:intron 15.0%
!! TCAAATTTAATAAATGAACA+TGG + chr8_2:58845239-58845258 None:intergenic 15.0%
!! TGTTCATTTATTAAATTTGA+AGG - chr8_2:58845239-58845258 Msa1257860:intron 15.0%
!!! TTTCCTATAGTTTTATTTTT+TGG - chr8_2:58845699-58845718 Msa1257860:CDS 15.0%
!!! TTCCTATAGTTTTATTTTTT+GGG - chr8_2:58845700-58845719 Msa1257860:CDS 15.0%
!!! AACGTGTAATTTTGAATAAA+GGG + chr8_2:58841094-58841113 None:intergenic 20.0%
!!! AAACGTGTAATTTTGAATAA+AGG + chr8_2:58841095-58841114 None:intergenic 20.0%
!!! TATTCAAAATTACACGTTTT+TGG - chr8_2:58841096-58841115 Msa1257860:CDS 20.0%
!! GAATTATATGATGTTATTAG+CGG - chr8_2:58841374-58841393 Msa1257860:intron 20.0%
!! ACGTTCTAATAAAAAGAAAA+CGG - chr8_2:58841620-58841639 Msa1257860:CDS 20.0%
!! CAAACAAAGAAAGTTAAAAA+GGG + chr8_2:58842824-58842843 None:intergenic 20.0%
!! ACAAACAAAGAAAGTTAAAA+AGG + chr8_2:58842825-58842844 None:intergenic 20.0%
!! TCAAATCCTGATAAAAAATA+AGG - chr8_2:58844399-58844418 Msa1257860:intron 20.0%
!! CAAGAAACTTATCATATAAA+AGG + chr8_2:58844549-58844568 None:intergenic 20.0%
!!! CTTTTATATGATAAGTTTCT+TGG - chr8_2:58844547-58844566 Msa1257860:intron 20.0%
!! AACATAATACAAGTATCAAA+AGG + chr8_2:58845676-58845695 None:intergenic 20.0%
!!! TCCTATAGTTTTATTTTTTG+GGG - chr8_2:58845701-58845720 Msa1257860:CDS 20.0%
!!! ATTTTTCATGTACTAATACA+AGG - chr8_2:58845740-58845759 Msa1257860:CDS 20.0%
!! ACAGATGTTTAAATAACTAT+GGG + chr8_2:58845899-58845918 None:intergenic 20.0%
!! TACAGATGTTTAAATAACTA+TGG + chr8_2:58845900-58845919 None:intergenic 20.0%
! CGTTCTAATAAAAAGAAAAC+GGG - chr8_2:58841621-58841640 Msa1257860:CDS 25.0%
! CATTCAATAAAAGAGAATGA+TGG - chr8_2:58841728-58841747 Msa1257860:CDS 25.0%
!!! ATAGACTGTGTTATTGATTT+TGG + chr8_2:58842139-58842158 None:intergenic 25.0%
! AATAACACAGTCTATTTACA+AGG - chr8_2:58842144-58842163 Msa1257860:intron 25.0%
!! ACAGATTTTCACAAAATATG+TGG + chr8_2:58842309-58842328 None:intergenic 25.0%
!! TTTTGTGAAAATCTGTTTGT+TGG - chr8_2:58842313-58842332 Msa1257860:intron 25.0%
!!! AAATTAATGCTGTTCTGAAA+TGG + chr8_2:58842395-58842414 None:intergenic 25.0%
! TGTGAATGATGTTAAACTTA+TGG - chr8_2:58842533-58842552 Msa1257860:CDS 25.0%
! TGTTAAACTTATGGTTATCA+AGG - chr8_2:58842542-58842561 Msa1257860:CDS 25.0%
! GTTAAACTTATGGTTATCAA+GGG - chr8_2:58842543-58842562 Msa1257860:CDS 25.0%
!!! TCCTTTTGAAAATGATTATG+AGG - chr8_2:58842605-58842624 Msa1257860:CDS 25.0%
!! ACCTCATAATCATTTTCAAA+AGG + chr8_2:58842609-58842628 None:intergenic 25.0%
!! TATCTATTTAAGACCAAAGA+AGG + chr8_2:58842692-58842711 None:intergenic 25.0%
!! TTAACTTTCTTTGTTTGTAG+AGG - chr8_2:58842827-58842846 Msa1257860:CDS 25.0%
! TTATTGACAAAACAAATTCG+CGG + chr8_2:58843236-58843255 None:intergenic 25.0%
! TATATCTTCATAGGTAAACT+TGG + chr8_2:58843429-58843448 None:intergenic 25.0%
!!! TTTTTTATAGTTGCTTCATC+TGG + chr8_2:58843557-58843576 None:intergenic 25.0%
! TATGTACTCAATTCAAACAA+AGG - chr8_2:58843869-58843888 Msa1257860:intron 25.0%
! ATGTACTCAATTCAAACAAA+GGG - chr8_2:58843870-58843889 Msa1257860:intron 25.0%
!!! TCAATATCAGCTTTAGTTTT+GGG + chr8_2:58844094-58844113 None:intergenic 25.0%
! ATATAAAAGGGAAAGGAAAA+TGG + chr8_2:58844536-58844555 None:intergenic 25.0%
! ACTTATCATATAAAAGGGAA+AGG + chr8_2:58844543-58844562 None:intergenic 25.0%
! ACAACTTCAACTTTCATTAT+AGG + chr8_2:58845100-58845119 None:intergenic 25.0%
! TAATAAATGAACATGGAGAA+CGG + chr8_2:58845232-58845251 None:intergenic 25.0%
! TTGAATGTAACTACAAGTAT+TGG + chr8_2:58845319-58845338 None:intergenic 25.0%
!! ATGTTCAGTTCTAATTAGTA+CGG + chr8_2:58845422-58845441 None:intergenic 25.0%
!!! CCTATAGTTTTATTTTTTGG+GGG - chr8_2:58845702-58845721 Msa1257860:CDS 25.0%
!!! CTATAGTTTTATTTTTTGGG+GGG - chr8_2:58845703-58845722 Msa1257860:CDS 25.0%
!!! CTTCTGAATGCTTTTTTTTT+TGG + chr8_2:58845770-58845789 None:intergenic 25.0%
!!! CAAAAAAAAAAGCATTCAGA+AGG - chr8_2:58845768-58845787 Msa1257860:CDS 25.0%
! TTTCTTCCATGAATTGTTAT+TGG - chr8_2:58845807-58845826 Msa1257860:CDS 25.0%
! ATTTGTCCAATAACAATTCA+TGG + chr8_2:58845816-58845835 None:intergenic 25.0%
!!! TATTTTTTTGGGAGAAAGTA+AGG - chr8_2:58845849-58845868 Msa1257860:CDS 25.0%
TCTTCGTTATCACAATTCTT+TGG - chr8_2:58840861-58840880 Msa1257860:three_prime_UTR 30.0%
AGATAATATACAAACGAACC+AGG + chr8_2:58841122-58841141 None:intergenic 30.0%
TTGTATGGCTGCTAAAAAAA+AGG - chr8_2:58841248-58841267 Msa1257860:intron 30.0%
TTCAATGTGATTATAGGTGT+CGG + chr8_2:58841357-58841376 None:intergenic 30.0%
TGTACCTTTATGCCAAAATA+CGG - chr8_2:58841588-58841607 Msa1257860:CDS 30.0%
AAAACACAGACAAGAAATGT+AGG - chr8_2:58841681-58841700 Msa1257860:CDS 30.0%
!! GTTAAACTCTGAAACTGTTT+AGG + chr8_2:58841966-58841985 None:intergenic 30.0%
GTAAAAGGAAAATGAAGAGA+TGG - chr8_2:58842024-58842043 Msa1257860:intron 30.0%
TTTCTTCCATTTGTCATTGA+GGG + chr8_2:58842089-58842108 None:intergenic 30.0%
ATTTCTTCCATTTGTCATTG+AGG + chr8_2:58842090-58842109 None:intergenic 30.0%
!!! TTGATTTTGGAATTGCTTGT+AGG + chr8_2:58842126-58842145 None:intergenic 30.0%
TATATAGATGGTGCACATAT+TGG + chr8_2:58842356-58842375 None:intergenic 30.0%
ATACTAAACTTGACTCACAA+TGG - chr8_2:58842506-58842525 Msa1257860:CDS 30.0%
GTCAAAGTTCATTGAAACAT+AGG - chr8_2:58842719-58842738 Msa1257860:CDS 30.0%
ATGTTGCGATAATCTTTCAA+TGG + chr8_2:58842867-58842886 None:intergenic 30.0%
TTGAAAGATTATCGCAACAT+TGG - chr8_2:58842867-58842886 Msa1257860:CDS 30.0%
TATTGACAAAACAAATTCGC+GGG + chr8_2:58843235-58843254 None:intergenic 30.0%
! AGACATGATAGTGACAAATT+TGG - chr8_2:58843292-58843311 Msa1257860:CDS 30.0%
! GACATGATAGTGACAAATTT+GGG - chr8_2:58843293-58843312 Msa1257860:CDS 30.0%
AAGATCAATAACTCCCTTAA+AGG + chr8_2:58843363-58843382 None:intergenic 30.0%
TTAAAAGCTAGTCCAGAAAA+TGG + chr8_2:58843776-58843795 None:intergenic 30.0%
ATCATGAGTGATTCATTTGT+AGG - chr8_2:58843797-58843816 Msa1257860:intron 30.0%
CAATTCAAACAAAGGGAAAA+AGG - chr8_2:58843877-58843896 Msa1257860:intron 30.0%
!! ACGTTAAAGTAGCTTTAACA+GGG - chr8_2:58843945-58843964 Msa1257860:intron 30.0%
GGTTTGAAAGATACTATAAC+AGG - chr8_2:58843986-58844005 Msa1257860:intron 30.0%
TCAATTGCAATCTTAATCAC+AGG + chr8_2:58844070-58844089 None:intergenic 30.0%
!! GTCAATATCAGCTTTAGTTT+TGG + chr8_2:58844095-58844114 None:intergenic 30.0%
TAAAGCTGATATTGACAAGA+TGG - chr8_2:58844099-58844118 Msa1257860:intron 30.0%
TCTGATTTATCTCTTCATCA+CGG + chr8_2:58844174-58844193 None:intergenic 30.0%
ATAAATCAGACAGTGATTGA+AGG - chr8_2:58844184-58844203 Msa1257860:intron 30.0%
TCGTCTCAAAAGAGAATTTA+AGG - chr8_2:58844240-58844259 Msa1257860:intron 30.0%
!!! CCTTCTCCTTATTTTTTATC+AGG + chr8_2:58844408-58844427 None:intergenic 30.0%
CCTGATAAAAAATAAGGAGA+AGG - chr8_2:58844405-58844424 Msa1257860:intron 30.0%
ATAAGGAGAAGGAATGAATT+AGG - chr8_2:58844416-58844435 Msa1257860:intron 30.0%
GATAGACATGGATTTAATCA+AGG + chr8_2:58844478-58844497 None:intergenic 30.0%
! TTTTTGCATAAAACTGCTGA+AGG + chr8_2:58844598-58844617 None:intergenic 30.0%
TATCTAACACTTGTTTATGC+AGG - chr8_2:58844679-58844698 Msa1257860:intron 30.0%
TATGTGCACAAAAAACAATC+AGG - chr8_2:58844770-58844789 Msa1257860:intron 30.0%
GAATTCAAGAGTGAAATCAA+AGG - chr8_2:58844857-58844876 Msa1257860:intron 30.0%
ATTATAGGTTCAAGCATTCT+CGG + chr8_2:58845085-58845104 None:intergenic 30.0%
GAACATTTAGGAGATGTAAT+TGG - chr8_2:58845130-58845149 Msa1257860:intron 30.0%
! TGTCACCAAAACTATTGATT+TGG + chr8_2:58845177-58845196 None:intergenic 30.0%
AATAAATGAACATGGAGAAC+GGG + chr8_2:58845231-58845250 None:intergenic 30.0%
CTTCATATTAATGACGTATC+TGG - chr8_2:58845290-58845309 Msa1257860:intron 30.0%
! GAACATTGTTTTCTTCCTTT+TGG - chr8_2:58845436-58845455 Msa1257860:intron 30.0%
TTCTGCATAATGTATTTCCT+TGG - chr8_2:58845626-58845645 Msa1257860:intron 30.0%
CCCCCAAAAAATAAAACTAT+AGG + chr8_2:58845705-58845724 None:intergenic 30.0%
!! AAAAGCATTCAGAAGGAAAA+AGG - chr8_2:58845775-58845794 Msa1257860:CDS 30.0%
! ATCTGTAGTTTTTGTCAACA+TGG - chr8_2:58845913-58845932 Msa1257860:five_prime_UTR 30.0%
ATGTTCATTCTGAATGATGT+TGG - chr8_2:58845958-58845977 Msa1257860:five_prime_UTR 30.0%
! GGCTTACTTCATTTAATTTC+TGG - chr8_2:58845979-58845998 Msa1257860:five_prime_UTR 30.0%
! TTGGTGTTTGGGATAAAGAA+AGG + chr8_2:58840679-58840698 None:intergenic 35.0%
TTCTTTATCCCAAACACCAA+AGG - chr8_2:58840679-58840698 Msa1257860:three_prime_UTR 35.0%
TCTTTATCCCAAACACCAAA+GGG - chr8_2:58840680-58840699 Msa1257860:three_prime_UTR 35.0%
!! TAGAAGAAAGCTCTAAACCA+TGG - chr8_2:58840704-58840723 Msa1257860:three_prime_UTR 35.0%
TCTTCACTCTGTAATCTCAA+TGG - chr8_2:58840753-58840772 Msa1257860:three_prime_UTR 35.0%
ACGAAGAAGAAGCAAAAGAA+CGG + chr8_2:58840848-58840867 None:intergenic 35.0%
ACTGAGAAATTTCTCCTTCT+TGG + chr8_2:58840924-58840943 None:intergenic 35.0%
TGAAAGAAATACATACCCTC+TGG + chr8_2:58840963-58840982 None:intergenic 35.0%
!!! AAAATTACACGTTTTTGGCC+TGG - chr8_2:58841101-58841120 Msa1257860:CDS 35.0%
TATGAACCATTGACACATAC+CGG - chr8_2:58841141-58841160 Msa1257860:CDS 35.0%
ACACATGTAAACAACGTATC+CGG + chr8_2:58841163-58841182 None:intergenic 35.0%
GATACGTTGTTTACATGTGT+CGG - chr8_2:58841163-58841182 Msa1257860:intron 35.0%
GCATAGATACATGTGAAAGA+AGG + chr8_2:58841201-58841220 None:intergenic 35.0%
AATAACAGTCCGAACTTGTA+TGG - chr8_2:58841233-58841252 Msa1257860:intron 35.0%
! TTTTAGCAGCCATACAAGTT+CGG + chr8_2:58841245-58841264 None:intergenic 35.0%
CTAGACTTAGACAGAGATAA+CGG - chr8_2:58841480-58841499 Msa1257860:CDS 35.0%
! TTTGGCATAAAGGTACAAGA+AGG + chr8_2:58841585-58841604 None:intergenic 35.0%
TTGTCAAATGAGGATTTCAC+AGG - chr8_2:58841645-58841664 Msa1257860:CDS 35.0%
TGTCAAATGAGGATTTCACA+GGG - chr8_2:58841646-58841665 Msa1257860:CDS 35.0%
ACAGACAAGAAATGTAGGTT+AGG - chr8_2:58841686-58841705 Msa1257860:CDS 35.0%
AATGAAACACAGTGACCAAA+GGG - chr8_2:58841883-58841902 Msa1257860:CDS 35.0%
!! GTGTTCATTTTTCCCAATGA+TGG + chr8_2:58841913-58841932 None:intergenic 35.0%
! CCTGTTTTGTCATTCATGAA+TGG + chr8_2:58841988-58842007 None:intergenic 35.0%
CCATTCATGAATGACAAAAC+AGG - chr8_2:58841985-58842004 Msa1257860:intron 35.0%
! TATGACACAAGCATCGTAAA+AGG - chr8_2:58842009-58842028 Msa1257860:intron 35.0%
TTGTTGGATTCATTCACAAC+GGG + chr8_2:58842061-58842080 None:intergenic 35.0%
GTTGTTGGATTCATTCACAA+CGG + chr8_2:58842062-58842081 None:intergenic 35.0%
TTGCTTGTAGGACAAACAAT+CGG + chr8_2:58842114-58842133 None:intergenic 35.0%
TAACCTCAACAGTAGATTCT+TGG + chr8_2:58842486-58842505 None:intergenic 35.0%
TGAAAGCAAAACTACTTGAC+AGG + chr8_2:58842585-58842604 None:intergenic 35.0%
ATTTCTGTCTCTTCCTTCTT+TGG - chr8_2:58842676-58842695 Msa1257860:CDS 35.0%
TTATCGCAACATTGGTATCA+TGG - chr8_2:58842875-58842894 Msa1257860:CDS 35.0%
GAAAGACAACTACAACTGAA+CGG - chr8_2:58842913-58842932 Msa1257860:CDS 35.0%
ACTGGAAGGAACTACAAAAT+TGG - chr8_2:58842948-58842967 Msa1257860:CDS 35.0%
AAGGAACTACAAAATTGGAG+AGG - chr8_2:58842953-58842972 Msa1257860:CDS 35.0%
ATGGAACAAGAACAAGAAAG+AGG - chr8_2:58843005-58843024 Msa1257860:CDS 35.0%
TGGAACAAGAACAAGAAAGA+GGG - chr8_2:58843006-58843025 Msa1257860:CDS 35.0%
ATCAACATCATTGATACTCC+TGG - chr8_2:58843077-58843096 Msa1257860:CDS 35.0%
TCACTATCATGTCTCTTGTT+CGG + chr8_2:58843286-58843305 None:intergenic 35.0%
! ATTGGTAGTTGAAGTACAAG+TGG + chr8_2:58843326-58843345 None:intergenic 35.0%
CTTGTACTTCAACTACCAAT+TGG - chr8_2:58843326-58843345 Msa1257860:CDS 35.0%
AGGGAGTTATTGATCTTGTT+AGG - chr8_2:58843366-58843385 Msa1257860:CDS 35.0%
TTAGGATGAAAGCCATAGTT+TGG - chr8_2:58843384-58843403 Msa1257860:CDS 35.0%
TAGGATGAAAGCCATAGTTT+GGG - chr8_2:58843385-58843404 Msa1257860:CDS 35.0%
ATCTGCAGGTATATCTTCAT+AGG + chr8_2:58843438-58843457 None:intergenic 35.0%
CTCATCATCTAACTCAACTA+TGG + chr8_2:58843504-58843523 None:intergenic 35.0%
CATAGTTGAGTTAGATGATG+AGG - chr8_2:58843502-58843521 Msa1257860:CDS 35.0%
TGGATCAGCTTTCAAAAACA+AGG - chr8_2:58843625-58843644 Msa1257860:CDS 35.0%
GGATCAGCTTTCAAAAACAA+GGG - chr8_2:58843626-58843645 Msa1257860:CDS 35.0%
TGATGGTAGATAATCCACTA+CGG + chr8_2:58843672-58843691 None:intergenic 35.0%
!! AGTGATGATGAACCATTTTC+TGG - chr8_2:58843761-58843780 Msa1257860:CDS 35.0%
GTACACCCTAACAAATGTAA+GGG + chr8_2:58843825-58843844 None:intergenic 35.0%
AGTACACCCTAACAAATGTA+AGG + chr8_2:58843826-58843845 None:intergenic 35.0%
AAAGGGAAAAAGGAGAGAAT+TGG - chr8_2:58843887-58843906 Msa1257860:intron 35.0%
!! GACGTTAAAGTAGCTTTAAC+AGG - chr8_2:58843944-58843963 Msa1257860:intron 35.0%
!! CGTTAAAGTAGCTTTAACAG+GGG - chr8_2:58843946-58843965 Msa1257860:intron 35.0%
CAATCTTAATCACAGGATCA+GGG + chr8_2:58844063-58844082 None:intergenic 35.0%
CTGATTTATCTCTTCATCAC+GGG + chr8_2:58844173-58844192 None:intergenic 35.0%
TTTCCAAAATCCATGAAGTG+AGG - chr8_2:58844747-58844766 Msa1257860:intron 35.0%
! ATACCTCACTTCATGGATTT+TGG + chr8_2:58844753-58844772 None:intergenic 35.0%
AAAAAACAATCAGGTGGACA+AGG - chr8_2:58844779-58844798 Msa1257860:intron 35.0%
AGTTTGCAGATATAACCGTA+CGG - chr8_2:58844804-58844823 Msa1257860:intron 35.0%
TTCAAGAGTGAAATCAAAGG+AGG - chr8_2:58844860-58844879 Msa1257860:intron 35.0%
GTTCCAAAAGAATACATTCC+CGG - chr8_2:58844887-58844906 Msa1257860:intron 35.0%
TTCCAAAAGAATACATTCCC+GGG - chr8_2:58844888-58844907 Msa1257860:intron 35.0%
ACACACTTGAATCTACATCA+TGG + chr8_2:58845006-58845025 None:intergenic 35.0%
TGATGTAGATTCAAGTGTGT+TGG - chr8_2:58845006-58845025 Msa1257860:intron 35.0%
GTTACTCCTGAAGAACATTT+AGG - chr8_2:58845118-58845137 Msa1257860:intron 35.0%
ACATCTCCTAAATGTTCTTC+AGG + chr8_2:58845127-58845146 None:intergenic 35.0%
! AGAGGCCAAATCAATAGTTT+TGG - chr8_2:58845169-58845188 Msa1257860:intron 35.0%
!!! AATAGTTTTGGTGACAAACC+AGG - chr8_2:58845181-58845200 Msa1257860:intron 35.0%
ATAAATGAACATGGAGAACG+GGG + chr8_2:58845230-58845249 None:intergenic 35.0%
! TTCTTCCTTTTGGTGAAAAC+AGG - chr8_2:58845446-58845465 Msa1257860:intron 35.0%
AGTATGTCAGTACACTAAGA+GGG - chr8_2:58845505-58845524 Msa1257860:intron 35.0%
! AGTTGATTCTGAATGTGTTG+AGG + chr8_2:58845585-58845604 None:intergenic 35.0%
! AGAAACTTCTTGCACTTTTG+TGG + chr8_2:58845610-58845629 None:intergenic 35.0%
! GAAAGTAAGGCGTTTAAACT+TGG - chr8_2:58845862-58845881 Msa1257860:CDS 35.0%
!!! AGAAACTGGCCTCTAGTTTT+CGG + chr8_2:58840648-58840667 None:intergenic 40.0%
!! CTTCTATCCCTTTGGTGTTT+GGG + chr8_2:58840690-58840709 None:intergenic 40.0%
!! TCTTCTATCCCTTTGGTGTT+TGG + chr8_2:58840691-58840710 None:intergenic 40.0%
AGAGCTTTCTTCTATCCCTT+TGG + chr8_2:58840698-58840717 None:intergenic 40.0%
TTGAAATGATTCTGCAGCCA+TGG + chr8_2:58840724-58840743 None:intergenic 40.0%
!!! GAGAAAGAAGGGTTGGTTTT+CGG + chr8_2:58840785-58840804 None:intergenic 40.0%
GAAACGAAGTGGAGAAAGAA+GGG + chr8_2:58840796-58840815 None:intergenic 40.0%
TGAAACGAAGTGGAGAAAGA+AGG + chr8_2:58840797-58840816 None:intergenic 40.0%
TCTTTCTCCACTTCGTTTCA+TGG - chr8_2:58840797-58840816 Msa1257860:three_prime_UTR 40.0%
CAAAAGAACGGGATTGTACT+GGG + chr8_2:58840836-58840855 None:intergenic 40.0%
CGAAGAAGAAGCAAAAGAAC+GGG + chr8_2:58840847-58840866 None:intergenic 40.0%
AGGTTTGAACCTATGAAGCA+TGG - chr8_2:58841268-58841287 Msa1257860:intron 40.0%
!! AAGAAGTGTCCATGCTTCAT+AGG + chr8_2:58841280-58841299 None:intergenic 40.0%
TATGAAGCATGGACACTTCT+TGG - chr8_2:58841279-58841298 Msa1257860:intron 40.0%
! TTCTTGGATTAGGCATGTTC+CGG - chr8_2:58841295-58841314 Msa1257860:intron 40.0%
GTTCAAAGTCCTATGAAGCA+CGG + chr8_2:58841447-58841466 None:intergenic 40.0%
GCTTCATAGGACTTTGAACT+TGG - chr8_2:58841448-58841467 Msa1257860:CDS 40.0%
!!! AGCTCCGTATTTTGGCATAA+AGG + chr8_2:58841595-58841614 None:intergenic 40.0%
! GAAAACGGGTTTGTCAAATG+AGG - chr8_2:58841635-58841654 Msa1257860:CDS 40.0%
AATACTTCGTTCCGTATACC+TGG - chr8_2:58841781-58841800 Msa1257860:CDS 40.0%
GGCTATGTAATCGAGCATTT+GGG + chr8_2:58841820-58841839 None:intergenic 40.0%
TGGCTATGTAATCGAGCATT+TGG + chr8_2:58841821-58841840 None:intergenic 40.0%
CAATGAAACACAGTGACCAA+AGG - chr8_2:58841882-58841901 Msa1257860:CDS 40.0%
ATGAAACACAGTGACCAAAG+GGG - chr8_2:58841884-58841903 Msa1257860:CDS 40.0%
TGCACATATTGGTGAAAAGC+GGG + chr8_2:58842345-58842364 None:intergenic 40.0%
GTGCACATATTGGTGAAAAG+CGG + chr8_2:58842346-58842365 None:intergenic 40.0%
TTGTGTATGACCTTACGTCA+TGG - chr8_2:58842450-58842469 Msa1257860:CDS 40.0%
ACAATTGAAGCCATGACGTA+AGG + chr8_2:58842463-58842482 None:intergenic 40.0%
TGTCCAAGAATCTACTGTTG+AGG - chr8_2:58842480-58842499 Msa1257860:CDS 40.0%
! GAACGGATTCTCTTCTATAC+TGG - chr8_2:58842930-58842949 Msa1257860:CDS 40.0%
GGATTCTCTTCTATACTGGA+AGG - chr8_2:58842934-58842953 Msa1257860:CDS 40.0%
! AAAATTGGAGAGGTGCATGA+GGG - chr8_2:58842963-58842982 Msa1257860:CDS 40.0%
!! TGTTGACTTCACCTTAGAAG+TGG - chr8_2:58843103-58843122 Msa1257860:CDS 40.0%
AAGGAATCTTCTGCACCAAT+TGG + chr8_2:58843344-58843363 None:intergenic 40.0%
TGGTGCAGAAGATTCCTTTA+AGG - chr8_2:58843346-58843365 Msa1257860:CDS 40.0%
GGTGCAGAAGATTCCTTTAA+GGG - chr8_2:58843347-58843366 Msa1257860:CDS 40.0%
AGGATGAAAGCCATAGTTTG+GGG - chr8_2:58843386-58843405 Msa1257860:CDS 40.0%
TGAGTTAGATGATGAGGCTA+TGG - chr8_2:58843508-58843527 Msa1257860:CDS 40.0%
!! TTGTTGCTTCTGGGTTTTCA+GGG + chr8_2:58843727-58843746 None:intergenic 40.0%
!! ATTGTTGCTTCTGGGTTTTC+AGG + chr8_2:58843728-58843747 None:intergenic 40.0%
! TCCTCTCTATTGTTGCTTCT+GGG + chr8_2:58843736-58843755 None:intergenic 40.0%
! ATCCTCTCTATTGTTGCTTC+TGG + chr8_2:58843737-58843756 None:intergenic 40.0%
TAGGCTCCCTTACATTTGTT+AGG - chr8_2:58843816-58843835 Msa1257860:intron 40.0%
! AGGCTCCCTTACATTTGTTA+GGG - chr8_2:58843817-58843836 Msa1257860:intron 40.0%
! ACATTTGTTAGGGTGTACTC+TGG - chr8_2:58843827-58843846 Msa1257860:intron 40.0%
GCAATCTTAATCACAGGATC+AGG + chr8_2:58844064-58844083 None:intergenic 40.0%
TCAGACAGTGATTGAAGGAA+TGG - chr8_2:58844189-58844208 Msa1257860:intron 40.0%
CAGACAGTGATTGAAGGAAT+GGG - chr8_2:58844190-58844209 Msa1257860:intron 40.0%
TTCATGCACAGCATCAACAT+TGG + chr8_2:58844368-58844387 None:intergenic 40.0%
CTGAAGGAAGGAAAGAAAAG+AGG + chr8_2:58844582-58844601 None:intergenic 40.0%
TGCATAAAACTGCTGAAGGA+AGG + chr8_2:58844594-58844613 None:intergenic 40.0%
! ATGCAGGTTGAAGCTAATGT+TGG - chr8_2:58844695-58844714 Msa1257860:intron 40.0%
CTTTCCCTGTAGTTTACTTG+GGG + chr8_2:58844725-58844744 None:intergenic 40.0%
GCTTTCCCTGTAGTTTACTT+GGG + chr8_2:58844726-58844745 None:intergenic 40.0%
TGCTTTCCCTGTAGTTTACT+TGG + chr8_2:58844727-58844746 None:intergenic 40.0%
GTGCACAAAAAACAATCAGG+TGG - chr8_2:58844773-58844792 Msa1257860:intron 40.0%
TTGAATTCATATCCACTGCC+TGG + chr8_2:58844845-58844864 None:intergenic 40.0%
TCCAAAAGAATACATTCCCG+GGG - chr8_2:58844889-58844908 Msa1257860:intron 40.0%
TTCCAATCCTTTAACAACCC+CGG + chr8_2:58844909-58844928 None:intergenic 40.0%
! TTGGAAGAGTGTATGAGCAA+TGG - chr8_2:58844923-58844942 Msa1257860:intron 40.0%
TACATCGACAACTGGAAATC+CGG + chr8_2:58844957-58844976 None:intergenic 40.0%
! TTCCTTTTGGTGAAAACAGG+TGG - chr8_2:58845449-58845468 Msa1257860:intron 40.0%
! AACCACCTGTTTTCACCAAA+AGG + chr8_2:58845454-58845473 None:intergenic 40.0%
TACTGAAACATCTCAGCAAG+AGG + chr8_2:58845489-58845508 None:intergenic 40.0%
CAGTATGTCAGTACACTAAG+AGG - chr8_2:58845504-58845523 Msa1257860:intron 40.0%
TACACTAAGAGGGATGACAA+AGG - chr8_2:58845515-58845534 Msa1257860:intron 40.0%
ACACTAAGAGGGATGACAAA+GGG - chr8_2:58845516-58845535 Msa1257860:intron 40.0%
CATGGCTAATTGCATAGAGT+AGG + chr8_2:58845550-58845569 None:intergenic 40.0%
GCAATTAGCCATGTTTGATG+TGG - chr8_2:58845557-58845576 Msa1257860:intron 40.0%
TTGAGGAACCACATCAAACA+TGG + chr8_2:58845568-58845587 None:intergenic 40.0%
CAAAAGGAAGATAACCCTCA+TGG + chr8_2:58845660-58845679 None:intergenic 40.0%
GTCTCCTTACCGAAAACTAG+AGG - chr8_2:58840636-58840655 Msa1257860:three_prime_UTR 45.0%
! TGGGATAAAGAAAGGCACAG+AGG + chr8_2:58840671-58840690 None:intergenic 45.0%
GGCTGCAGAATCATTTCAAG+TGG - chr8_2:58840725-58840744 Msa1257860:three_prime_UTR 45.0%
GCAAAAGAACGGGATTGTAC+TGG + chr8_2:58840837-58840856 None:intergenic 45.0%
! GAAATACATACCCTCTGGAG+TGG + chr8_2:58840958-58840977 None:intergenic 45.0%
ACGTATCCGGTATGTGTCAA+TGG + chr8_2:58841150-58841169 None:intergenic 45.0%
GCATGGACACTTCTTGGATT+AGG - chr8_2:58841285-58841304 Msa1257860:intron 45.0%
!! TATAGGTGTCGGTATCGTGT+CGG + chr8_2:58841346-58841365 None:intergenic 45.0%
!! TATTAGCGGTGTCGACGTAT+CGG - chr8_2:58841388-58841407 Msa1257860:intron 45.0%
AGTCCTATGAAGCACGGATA+CGG + chr8_2:58841441-58841460 None:intergenic 45.0%
AGGATTTCACAGGGTATAGC+TGG - chr8_2:58841655-58841674 Msa1257860:CDS 45.0%
!! AGGAGCATCTTCCAGGTATA+CGG + chr8_2:58841795-58841814 None:intergenic 45.0%
TGTAATCGAGCATTTGGGAG+AGG + chr8_2:58841815-58841834 None:intergenic 45.0%
TCCTCAGCTCTCTTCAGTAA+TGG - chr8_2:58841856-58841875 Msa1257860:CDS 45.0%
TCCATTACTGAAGAGAGCTG+AGG + chr8_2:58841860-58841879 None:intergenic 45.0%
AGGTTCGTTGAGCATTTGAG+AGG + chr8_2:58841946-58841965 None:intergenic 45.0%
GCACATATTGGTGAAAAGCG+GGG + chr8_2:58842344-58842363 None:intergenic 45.0%
! CAAAATTGGAGAGGTGCATG+AGG - chr8_2:58842962-58842981 Msa1257860:CDS 45.0%
AAGGTGAAGTCAACATGACC+AGG + chr8_2:58843098-58843117 None:intergenic 45.0%
TGCTTGTTTGACAGTGTTGC+TGG - chr8_2:58843158-58843177 Msa1257860:CDS 45.0%
AGCCACAATCAGAAACTGTG+TGG - chr8_2:58843186-58843205 Msa1257860:CDS 45.0%
CTCCACACAGTTTCTGATTG+TGG + chr8_2:58843191-58843210 None:intergenic 45.0%
CACAATCAGAAACTGTGTGG+AGG - chr8_2:58843189-58843208 Msa1257860:CDS 45.0%
TGGAGGCAAGCTGATAGATA+TGG - chr8_2:58843206-58843225 Msa1257860:CDS 45.0%
GTCAATAAAATGGACCGCCT+TGG - chr8_2:58843248-58843267 Msa1257860:CDS 45.0%
TTCGGAAAAAGTTCGCACCA+AGG + chr8_2:58843268-58843287 None:intergenic 45.0%
ATGAAAGCCATAGTTTGGGG+TGG - chr8_2:58843389-58843408 Msa1257860:CDS 45.0%
TTCTTCTCCACCCCAAACTA+TGG + chr8_2:58843399-58843418 None:intergenic 45.0%
TGTAATCTTGAGCCTGCTCT+AGG + chr8_2:58843463-58843482 None:intergenic 45.0%
GCTATGGAGAACTACCTAGA+AGG - chr8_2:58843524-58843543 Msa1257860:CDS 45.0%
! CATCTGGTTCAACTCCTTCT+AGG + chr8_2:58843541-58843560 None:intergenic 45.0%
ACACAACACTGGCACAAAAG+TGG + chr8_2:58843606-58843625 None:intergenic 45.0%
! ACTTTTGTGCCAGTGTTGTG+TGG - chr8_2:58843605-58843624 Msa1257860:CDS 45.0%
AAAGCTGATCCACACAACAC+TGG + chr8_2:58843617-58843636 None:intergenic 45.0%
CTACGGCATCTAACAATGGT+TGG + chr8_2:58843655-58843674 None:intergenic 45.0%
ACCATTGTTAGATGCCGTAG+TGG - chr8_2:58843655-58843674 Msa1257860:CDS 45.0%
TCCACTACGGCATCTAACAA+TGG + chr8_2:58843659-58843678 None:intergenic 45.0%
! TTCATTGGTGGTACGTCAAG+TGG + chr8_2:58843695-58843714 None:intergenic 45.0%
ACTTGACGTACCACCAATGA+AGG - chr8_2:58843694-58843713 Msa1257860:CDS 45.0%
CTTGACGTACCACCAATGAA+GGG - chr8_2:58843695-58843714 Msa1257860:CDS 45.0%
ACCCAGAAGCAACAATAGAG+AGG - chr8_2:58843732-58843751 Msa1257860:CDS 45.0%
! TACTCTGGAAAGCTAACTGC+TGG - chr8_2:58843842-58843861 Msa1257860:intron 45.0%
! ACTCTGGAAAGCTAACTGCT+GGG - chr8_2:58843843-58843862 Msa1257860:intron 45.0%
GATATTGACAAGATGGCAGC+TGG - chr8_2:58844106-58844125 Msa1257860:intron 45.0%
TGGTTTAGTCAAGCTTGCAC+AGG - chr8_2:58844126-58844145 Msa1257860:intron 45.0%
GCTTGATCGCATGATAGACA+TGG + chr8_2:58844490-58844509 None:intergenic 45.0%
TGCTCCCCAAGTAAACTACA+GGG - chr8_2:58844718-58844737 Msa1257860:intron 45.0%
TGTGCACATACCTCACTTCA+TGG + chr8_2:58844760-58844779 None:intergenic 45.0%
! ACCCCGGGAATGTATTCTTT+TGG + chr8_2:58844893-58844912 None:intergenic 45.0%
TACATTCCCGGGGTTGTTAA+AGG - chr8_2:58844899-58844918 Msa1257860:intron 45.0%
TCCAATCCTTTAACAACCCC+GGG + chr8_2:58844908-58844927 None:intergenic 45.0%
GTGTATGAGCAATGGTGTTC+TGG - chr8_2:58844931-58844950 Msa1257860:intron 45.0%
!! AAGTGTGTTGGCTTTCCAGT+TGG - chr8_2:58845018-58845037 Msa1257860:intron 45.0%
CGGGAAGGAATAAGAAAAGC+CGG - chr8_2:58845058-58845077 Msa1257860:intron 45.0%
GGTGATCTCAACTCAAGAAG+AGG - chr8_2:58845151-58845170 Msa1257860:intron 45.0%
!! AGTTTTGGTGACAAACCAGG+TGG - chr8_2:58845184-58845203 Msa1257860:intron 45.0%
TCCTTGGTATCCTAACCATG+AGG - chr8_2:58845642-58845661 Msa1257860:intron 45.0%
CCTTGGTATCCTAACCATGA+GGG - chr8_2:58845643-58845662 Msa1257860:intron 45.0%
GGAAGATAACCCTCATGGTT+AGG + chr8_2:58845655-58845674 None:intergenic 45.0%
!! TATATATATATATATATAGA+TGG + chr8_2:58842368-58842387 None:intergenic 5.0%
!!! CTGGCCTCTAGTTTTCGGTA+AGG + chr8_2:58840643-58840662 None:intergenic 50.0%
! GAAAGGCACAGAGGAGAAAC+TGG + chr8_2:58840662-58840681 None:intergenic 50.0%
CGAAGTGGAGAAAGAAGGGT+TGG + chr8_2:58840792-58840811 None:intergenic 50.0%
TTGTACTGGGCGAAAACCTG+TGG + chr8_2:58840823-58840842 None:intergenic 50.0%
TCTCCTTCTTGGAGCAAGCT+GGG + chr8_2:58840913-58840932 None:intergenic 50.0%
TTCTCCTTCTTGGAGCAAGC+TGG + chr8_2:58840914-58840933 None:intergenic 50.0%
GATTAGGCATGTTCCGGTGT+CGG - chr8_2:58841301-58841320 Msa1257860:intron 50.0%
GTCCTATGAAGCACGGATAC+GGG + chr8_2:58841440-58841459 None:intergenic 50.0%
GATTACATAGCCAACTGCGC+TGG - chr8_2:58841828-58841847 Msa1257860:CDS 50.0%
ACCAAAGGGGCTTCCATCAT+TGG - chr8_2:58841897-58841916 Msa1257860:CDS 50.0%
CCAAAGGGGCTTCCATCATT+GGG - chr8_2:58841898-58841917 Msa1257860:CDS 50.0%
ACGTCGCCCTCAATGACAAA+TGG - chr8_2:58842080-58842099 Msa1257860:intron 50.0%
ATCATGGCTCACATAGACGC+TGG - chr8_2:58842891-58842910 Msa1257860:CDS 50.0%
!! AACGGCAACAATGGACTGGA+TGG - chr8_2:58842986-58843005 Msa1257860:CDS 50.0%
GGTGGTTGCAGCAGAAGTAA+TGG + chr8_2:58843036-58843055 None:intergenic 50.0%
TGCTGCAACCACCACTTTCT+GGG - chr8_2:58843043-58843062 Msa1257860:CDS 50.0%
GTGCTTATCCCAGAAAGTGG+TGG + chr8_2:58843054-58843073 None:intergenic 50.0%
CCTGTGCTTATCCCAGAAAG+TGG + chr8_2:58843057-58843076 None:intergenic 50.0%
!! CCACTTTCTGGGATAAGCAC+AGG - chr8_2:58843054-58843073 Msa1257860:CDS 50.0%
! AAGAGCACGCTCCACTTCTA+AGG + chr8_2:58843117-58843136 None:intergenic 50.0%
TAGAAGTGGAGCGTGCTCTT+AGG - chr8_2:58843117-58843136 Msa1257860:CDS 50.0%
AGAAGTGGAGCGTGCTCTTA+GGG - chr8_2:58843118-58843137 Msa1257860:CDS 50.0%
! GTTTGACAGTGTTGCTGGTG+TGG - chr8_2:58843163-58843182 Msa1257860:CDS 50.0%
GGAAAAAGTTCGCACCAAGG+CGG + chr8_2:58843265-58843284 None:intergenic 50.0%
! GTTTGGGGTGGAGAAGAACT+TGG - chr8_2:58843401-58843420 Msa1257860:CDS 50.0%
TGGCACAAAAGTGGCTGCTA+TGG + chr8_2:58843597-58843616 None:intergenic 50.0%
TCAGGGTCAGTACCCTTCAT+TGG + chr8_2:58843710-58843729 None:intergenic 50.0%
GGGGATATTGTTGCTCTTGC+TGG - chr8_2:58843965-58843984 Msa1257860:intron 50.0%
CACGGGAGAAGTGGAAAGAA+GGG + chr8_2:58844156-58844175 None:intergenic 50.0%
TCACGGGAGAAGTGGAAAGA+AGG + chr8_2:58844157-58844176 None:intergenic 50.0%
TCTCTTCATCACGGGAGAAG+TGG + chr8_2:58844165-58844184 None:intergenic 50.0%
GTGCTCCCCAAGTAAACTAC+AGG - chr8_2:58844717-58844736 Msa1257860:intron 50.0%
!! TTCCATCGGTTCGAACCGTA+CGG + chr8_2:58844822-58844841 None:intergenic 50.0%
TATCCACTGCCTGGTTCCAT+CGG + chr8_2:58844836-58844855 None:intergenic 50.0%
TCCCGGGGTTGTTAAAGGAT+TGG - chr8_2:58844904-58844923 Msa1257860:intron 50.0%
ATGAGCAATGGTGTTCTGGC+CGG - chr8_2:58844935-58844954 Msa1257860:intron 50.0%
ACTGCACGTACATCGACAAC+TGG + chr8_2:58844965-58844984 None:intergenic 50.0%
CGATGTACGTGCAGTACTTG+TGG - chr8_2:58844970-58844989 Msa1257860:intron 50.0%
GTACGTGCAGTACTTGTGGA+TGG - chr8_2:58844974-58844993 Msa1257860:intron 50.0%
! TGGCAGCAAGAGGAGCTTTT+CGG - chr8_2:58845038-58845057 Msa1257860:intron 50.0%
AGGTTCAAGCATTCTCGGTC+CGG + chr8_2:58845080-58845099 None:intergenic 50.0%
! TGACAAACCAGGTGGACTCA+AGG - chr8_2:58845192-58845211 Msa1257860:intron 50.0%
TGACTTACCTTGAGTCCACC+TGG + chr8_2:58845202-58845221 None:intergenic 50.0%
CCCTCATGGTTAGGATACCA+AGG + chr8_2:58845646-58845665 None:intergenic 50.0%
CCTGTGGCCATGAAACGAAG+TGG + chr8_2:58840807-58840826 None:intergenic 55.0%
CCACTTCGTTTCATGGCCAC+AGG - chr8_2:58840804-58840823 Msa1257860:three_prime_UTR 55.0%
CTCCTTCTTGGAGCAAGCTG+GGG + chr8_2:58840912-58840931 None:intergenic 55.0%
TTTCGCCATGTCCACTCCAG+AGG - chr8_2:58840944-58840963 Msa1257860:three_prime_UTR 55.0%
TTCGCCATGTCCACTCCAGA+GGG - chr8_2:58840945-58840964 Msa1257860:three_prime_UTR 55.0%
!! CATACCCTCTGGAGTGGACA+TGG + chr8_2:58840952-58840971 None:intergenic 55.0%
! TGTCGGTATCGTGTCGGTGT+TGG + chr8_2:58841340-58841359 None:intergenic 55.0%
ATGAAGCACGGATACGGGCA+CGG + chr8_2:58841435-58841454 None:intergenic 55.0%
TGCCCGTATCCGTGCTTCAT+AGG - chr8_2:58841435-58841454 Msa1257860:CDS 55.0%
! CGTGCTGCAGCTCCGTATTT+TGG + chr8_2:58841603-58841622 None:intergenic 55.0%
!! TTGGGAGAGGAGCATCTTCC+AGG + chr8_2:58841802-58841821 None:intergenic 55.0%
GAGGAAAGAACCAGCGCAGT+TGG + chr8_2:58841841-58841860 None:intergenic 55.0%
! CCCAATGATGGAAGCCCCTT+TGG + chr8_2:58841901-58841920 None:intergenic 55.0%
GTCATTGAGGGCGACGTTGT+TGG + chr8_2:58842077-58842096 None:intergenic 55.0%
! TGGAGAGGTGCATGAGGGAA+CGG - chr8_2:58842968-58842987 Msa1257860:CDS 55.0%
GCATGAGGGAACGGCAACAA+TGG - chr8_2:58842977-58842996 Msa1257860:CDS 55.0%
AGGGAACGGCAACAATGGAC+TGG - chr8_2:58842982-58843001 Msa1257860:CDS 55.0%
CTGCTGCAACCACCACTTTC+TGG - chr8_2:58843042-58843061 Msa1257860:CDS 55.0%
ACCTGCAGATCTCCTAGAGC+AGG - chr8_2:58843448-58843467 Msa1257860:CDS 55.0%
GGTGGTACGTCAAGTGGTGA+TGG + chr8_2:58843689-58843708 None:intergenic 55.0%
GGGTCAGTACCCTTCATTGG+TGG + chr8_2:58843707-58843726 None:intergenic 55.0%
AACCGTACGGTTCGAACCGA+TGG - chr8_2:58844817-58844836 Msa1257860:intron 55.0%
GCTTTCCAGTTGGCAGCAAG+AGG - chr8_2:58845028-58845047 Msa1257860:intron 55.0%
AAGCTCCTCTTGCTGCCAAC+TGG + chr8_2:58845036-58845055 None:intergenic 55.0%
! GGCAGCAAGAGGAGCTTTTC+GGG - chr8_2:58845039-58845058 Msa1257860:intron 55.0%
!! GCAAGAGGAGCTTTTCGGGA+AGG - chr8_2:58845043-58845062 Msa1257860:intron 55.0%
TGGAGCAAGCTGGGGTGAAG+TGG + chr8_2:58840904-58840923 None:intergenic 60.0%
! CACCCCAGCTTGCTCCAAGA+AGG - chr8_2:58840907-58840926 Msa1257860:three_prime_UTR 60.0%
ACACGACACGTGTCCGACAC+CGG + chr8_2:58841317-58841336 None:intergenic 60.0%
!! CGTGCTCTTAGGGTGCTGGA+TGG - chr8_2:58843128-58843147 Msa1257860:CDS 60.0%
!! GCCTGCTCTAGGAGATCTGC+AGG + chr8_2:58843452-58843471 None:intergenic 60.0%
GTTGTGTGACCCCGAGAGTC+CGG - chr8_2:58844015-58844034 Msa1257860:intron 60.0%
TCAAGCACGACCGGACTCTC+GGG + chr8_2:58844028-58844047 None:intergenic 60.0%
CTCAAGCACGACCGGACTCT+CGG + chr8_2:58844029-58844048 None:intergenic 60.0%
AGAGTCCGGTCGTGCTTGAG+CGG - chr8_2:58844029-58844048 Msa1257860:intron 60.0%
TCCATCCGCTCAAGCACGAC+CGG + chr8_2:58844037-58844056 None:intergenic 60.0%
CGGTTCGAACCGATGGAACC+AGG - chr8_2:58844824-58844843 Msa1257860:intron 60.0%
GAACCGATGGAACCAGGCAG+TGG - chr8_2:58844830-58844849 Msa1257860:intron 60.0%
ACGGATACGGGCACGGACAC+TGG + chr8_2:58841428-58841447 None:intergenic 65.0%
GGAGCGTGCTCTTAGGGTGC+TGG - chr8_2:58843124-58843143 Msa1257860:CDS 65.0%
CAAGCACGACCGGACTCTCG+GGG + chr8_2:58844027-58844046 None:intergenic 65.0%
TCCGGTCGTGCTTGAGCGGA+TGG - chr8_2:58844033-58844052 Msa1257860:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 58840605 58846026 58840605 ID=Msa1257860;Name=Msa1257860
chr8_2 mRNA 58840605 58846026 58840605 ID=Msa1257860-mRNA-1;Parent=Msa1257860;Name=Msa1257860-mRNA-1;_AED=0.18;_eAED=0.18;_QI=118|1|1|1|1|1|4|391|779
chr8_2 exon 58840605 58841163 58840605 ID=Msa1257860-mRNA-1:exon:18220;Parent=Msa1257860-mRNA-1
chr8_2 exon 58841418 58841930 58841418 ID=Msa1257860-mRNA-1:exon:18219;Parent=Msa1257860-mRNA-1
chr8_2 exon 58842370 58843784 58842370 ID=Msa1257860-mRNA-1:exon:18218;Parent=Msa1257860-mRNA-1
chr8_2 exon 58845665 58846026 58845665 ID=Msa1257860-mRNA-1:exon:18217;Parent=Msa1257860-mRNA-1
chr8_2 five_prime_UTR 58845909 58846026 58845909 ID=Msa1257860-mRNA-1:five_prime_utr;Parent=Msa1257860-mRNA-1
chr8_2 CDS 58845665 58845908 58845665 ID=Msa1257860-mRNA-1:cds;Parent=Msa1257860-mRNA-1
chr8_2 CDS 58842370 58843784 58842370 ID=Msa1257860-mRNA-1:cds;Parent=Msa1257860-mRNA-1
chr8_2 CDS 58841418 58841930 58841418 ID=Msa1257860-mRNA-1:cds;Parent=Msa1257860-mRNA-1
chr8_2 CDS 58840996 58841163 58840996 ID=Msa1257860-mRNA-1:cds;Parent=Msa1257860-mRNA-1
chr8_2 three_prime_UTR 58840605 58840995 58840605 ID=Msa1257860-mRNA-1:three_prime_utr;Parent=Msa1257860-mRNA-1
Gene Sequence

>Msa1257860

ATGGCTGCAGAATCATTTCAAGTGGCAACTTCTTCACTCTGTAATCTCAATGGCTCTCACCGAAAACCAACCCTTCTTTCTCCACTTCGTTTCATGGCCACAGGTTTTCGCCCAGTACAATCCCGTTCTTTTGCTTCTTCTTCGTTATCACAATTCTTTGGAACTACTAGAATTAAATCCACTTCACCCCAGCTTGCTCCAAGAAGGAGAAATTTCTCAGTTTTCGCCATGTCCACTCCAGAGGAGGCGAAGCGTGCTGTTCCATTGAAAGATTATCGCAACATTGGTATCATGGCTCACATAGACGCTGGAAAGACAACTACAACTGAACGGATTCTCTTCTATACTGGAAGGAACTACAAAATTGGAGAGGTGCATGAGGGAACGGCAACAATGGACTGGATGGAACAAGAACAAGAAAGAGGGATTACCATTACTTCTGCTGCAACCACCACTTTCTGGGATAAGCACAGGATCAACATCATTGATACTCCTGGTCATGTTGACTTCACCTTAGAAGTGGAGCGTGCTCTTAGGGTGCTGGATGGAGCTATATGCTTGTTTGACAGTGTTGCTGGTGTGGAGCCACAATCAGAAACTGTGTGGAGGCAAGCTGATAGATATGGAGTCCCGCGAATTTGTTTTGTCAATAAAATGGACCGCCTTGGTGCGAACTTTTTCCGAACAAGAGACATGATAGTGACAAATTTGGGTGCTAAACCACTTGTACTTCAACTACCAATTGGTGCAGAAGATTCCTTTAAGGGAGTTATTGATCTTGTTAGGATGAAAGCCATAGTTTGGGGTGGAGAAGAACTTGGTGCCAAGTTTACCTATGAAGATATACCTGCAGATCTCCTAGAGCAGGCTCAAGATTACAGATCTCAGATGATAGAAACCATAGTTGAGTTAGATGATGAGGCTATGGAGAACTACCTAGAAGGAGTTGAACCAGATGAAGCAACTATAAAAAAATTAATCAGGAAGGGATCCATAGCAGCCACTTTTGTGCCAGTGTTGTGTGGATCAGCTTTCAAAAACAAGGGAGTCCAACCATTGTTAGATGCCGTAGTGGATTATCTACCATCACCACTTGACGTACCACCAATGAAGGGTACTGACCCTGAAAACCCAGAAGCAACAATAGAGAGGATAGCTAGTGATGATGAACCATTTTCTGGACTAGCTTTTAAGATCATGAGTGATTCATTTGTAGGCTCCCTTACATTTGTTAGGGTGTACTCTGGAAAGCTAACTGCTGGGTCTTATGTACTCAATTCAAACAAAGGGAAAAAGGAGAGAATTGGTCGACTTCTAGAAATGCATGCAAACAGCAGAGAAGACGTTAAAGTAGCTTTAACAGGGGATATTGTTGCTCTTGCTGGTTTGAAAGATACTATAACAGGTGAAACGTTGTGTGACCCCGAGAGTCCGGTCGTGCTTGAGCGGATGGACTTCCCTGATCCTGTGATTAAGATTGCAATTGAACCCAAAACTAAAGCTGATATTGACAAGATGGCAGCTGGTTTAGTCAAGCTTGCACAGGAAGACCCTTCTTTCCACTTCTCCCGTGATGAAGAGATAAATCAGACAGTGATTGAAGGAATGGGAGAATTGCATCTTGAAATCATTGTTGATCGTCTCAAAAGAGAATTTAAGGTTGAAGCTAATGTTGGTGCTCCCCAAGTAAACTACAGGGAAAGCATTTCCAAAATCCATGAAGTGAGGTATGTGCACAAAAAACAATCAGGTGGACAAGGTCAGTTTGCAGATATAACCGTACGGTTCGAACCGATGGAACCAGGCAGTGGATATGAATTCAAGAGTGAAATCAAAGGAGGAGCAGTTCCAAAAGAATACATTCCCGGGGTTGTTAAAGGATTGGAAGAGTGTATGAGCAATGGTGTTCTGGCCGGATTTCCAGTTGTCGATGTACGTGCAGTACTTGTGGATGGTACTTACCATGATGTAGATTCAAGTGTGTTGGCTTTCCAGTTGGCAGCAAGAGGAGCTTTTCGGGAAGGAATAAGAAAAGCCGGACCGAGAATGCTTGAACCTATAATGAAAGTTGAAGTTGTTACTCCTGAAGAACATTTAGGAGATGTAATTGGTGATCTCAACTCAAGAAGAGGCCAAATCAATAGTTTTGGTGACAAACCAGGTGGACTCAAGGTGGTTGATTCATTAGTACCTCTTGCTGAGATGTTTCAGTATGTCAGTACACTAAGAGGGATGACAAAGGGTCGTGCATCCTACTCTATGCAATTAGCCATGTTTGATGTGGTTCCTCAACACATTCAGAATCAACTTGCCACAAAAGTGCAAGAAGTTTCTGCATAA
Protein sequence

>Msa1257860

MAAESFQVATSSLCNLNGSHRKPTLLSPLRFMATGFRPVQSRSFASSSLSQFFGTTRIKSTSPQLAPRRRNFSVFAMSTPEEAKRAVPLKDYRNIGIMAHIDAGKTTTTERILFYTGRNYKIGEVHEGTATMDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAGVEPQSETVWRQADRYGVPRICFVNKMDRLGANFFRTRDMIVTNLGAKPLVLQLPIGAEDSFKGVIDLVRMKAIVWGGEELGAKFTYEDIPADLLEQAQDYRSQMIETIVELDDEAMENYLEGVEPDEATIKKLIRKGSIAATFVPVLCGSAFKNKGVQPLLDAVVDYLPSPLDVPPMKGTDPENPEATIERIASDDEPFSGLAFKIMSDSFVGSLTFVRVYSGKLTAGSYVLNSNKGKKERIGRLLEMHANSREDVKVALTGDIVALAGLKDTITGETLCDPESPVVLERMDFPDPVIKIAIEPKTKADIDKMAAGLVKLAQEDPSFHFSRDEEINQTVIEGMGELHLEIIVDRLKREFKVEANVGAPQVNYRESISKIHEVRYVHKKQSGGQGQFADITVRFEPMEPGSGYEFKSEIKGGAVPKEYIPGVVKGLEECMSNGVLAGFPVVDVRAVLVDGTYHDVDSSVLAFQLAARGAFREGIRKAGPRMLEPIMKVEVVTPEEHLGDVIGDLNSRRGQINSFGDKPGGLKVVDSLVPLAEMFQYVSTLRGMTKGRASYSMQLAMFDVVPQHIQNQLATKVQEVSA*