AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1440990


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1440990 MtrunA17_Chr3g0122171 94.514 401 18 3 1 399 1 399 0.0 692
Msa1440990 MtrunA17_Chr8g0386481 22.343 367 202 11 102 398 534 887 1.58e-16 81.6
Msa1440990 MtrunA17_Chr2g0293821 27.368 190 121 4 94 283 160 332 1.78e-16 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1440990 AT3G23700.1 69.799 298 90 0 102 399 95 392 7.83e-148 424
Msa1440990 AT1G12800.1 27.778 252 162 7 155 398 527 766 2.74e-19 90.5
Msa1440990 AT5G30510.1 30.526 190 114 3 94 283 167 338 7.89e-19 88.2

Find 124 sgRNAs with CRISPR-Local

Find 728 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTGGTTTGGATTGAATTT+TGG 0.180002 tig0029172:-21524 None:intergenic
CAGCTTTCACATTTATTTAA+AGG 0.189630 tig0029172:+26779 Msa1440990:three_prime_UTR
GGTAACTTGCGAGGGCATTT+AGG 0.208511 tig0029172:-21726 None:intergenic
TCAACTCTCTTGCAAGTTCT+TGG 0.229040 tig0029172:-22897 None:intergenic
CATTTAACTAACTCGCAAAA+AGG 0.276793 tig0029172:+26845 Msa1440990:three_prime_UTR
AGAGGAAGAGGAAGATGAAT+TGG 0.327518 tig0029172:-21541 None:intergenic
TCTCACAAGACTTGCAGCTT+TGG 0.347827 tig0029172:+26246 Msa1440990:CDS
AAGAGGAAGATGAATTGGTT+TGG 0.348535 tig0029172:-21536 None:intergenic
CAGTCGCATCGATCCCTTAC+CGG 0.359860 tig0029172:+24623 Msa1440990:CDS
GTAACTTGCGAGGGCATTTA+GGG 0.363821 tig0029172:-21725 None:intergenic
ATGCTGGAGGCCTGCTGGTT+CGG 0.365464 tig0029172:+22616 Msa1440990:CDS
GAACCAATTCGCGTTGTTGA+TGG 0.375682 tig0029172:-21573 None:intergenic
CGGGGCTCAGCTGTGGGAAC+GGG 0.388395 tig0029172:-22662 None:intergenic
CCACCATCAACAACGCGAAT+TGG 0.391519 tig0029172:+21570 Msa1440990:five_prime_UTR
TAGTTAAATGAATCACGATT+TGG 0.393801 tig0029172:-26832 None:intergenic
AACCGACTCTTGCTTCAAAA+AGG 0.402684 tig0029172:-23398 None:intergenic
TATCTGAAAAGGAAGCTTCA+TGG 0.403011 tig0029172:+23343 Msa1440990:CDS
GTCGGTTCTGTTGAGGACTA+TGG 0.403821 tig0029172:+23414 Msa1440990:CDS
GCAGGTCTTTATCACCTTAC+CGG 0.410702 tig0029172:+23550 Msa1440990:intron
ATGATGCTCTTCGTCAAGCC+AGG 0.415476 tig0029172:+21886 Msa1440990:CDS
TGACCAGGAAGGCATCAAAA+AGG 0.417349 tig0029172:+26676 Msa1440990:CDS
TAAAGTAAATTGTCAATAAA+CGG 0.417990 tig0029172:-26884 None:intergenic
CATCGATCCCTTACCGGGGC+TGG 0.420951 tig0029172:+24629 Msa1440990:CDS
TTCCGTTGTTGAACTCGAAA+TGG 0.425257 tig0029172:+21593 Msa1440990:exon
TGGTGGAGAAGAAGAGGAAG+AGG 0.428601 tig0029172:-21553 None:intergenic
GAAGAGCTATTGCAGGAAGA+TGG 0.434626 tig0029172:+24663 Msa1440990:CDS
AGACGAGGAGAAACGGAAAT+TGG 0.435020 tig0029172:+23317 Msa1440990:CDS
CGATGCAAGAATCAGTCGTC+AGG 0.443629 tig0029172:+26205 Msa1440990:CDS
AGTAGTACTGCTGAAAGAAT+CGG 0.451994 tig0029172:-24598 None:intergenic
AATACTTGAAGAGCTATTGC+AGG 0.455980 tig0029172:+24656 Msa1440990:CDS
CATTTACAATGGTAGGGTTG+AGG 0.458343 tig0029172:+22587 Msa1440990:CDS
AGTCGCATCGATCCCTTACC+GGG 0.459967 tig0029172:+24624 Msa1440990:CDS
ATTTACAATGGTAGGGTTGA+GGG 0.460450 tig0029172:+22588 Msa1440990:CDS
TTTACTCTCCTTGCTCGAGC+TGG 0.461579 tig0029172:+26376 Msa1440990:CDS
AAAGGCAATACAACGAGTAT+TGG 0.467765 tig0029172:+26694 Msa1440990:CDS
TCTGCAACCCTAGGTTCCTT+CGG 0.469011 tig0029172:+21624 Msa1440990:CDS
TTTGATGCCTTCCTGGTCAA+GGG 0.470271 tig0029172:-26672 None:intergenic
CGAAGAGCATCATGAGAGTC+GGG 0.473813 tig0029172:-21876 None:intergenic
TATTCAAAACATATCAACAT+AGG 0.473981 tig0029172:+23372 Msa1440990:CDS
ACGGGGCTCAGCTGTGGGAA+CGG 0.478203 tig0029172:-22663 None:intergenic
TGAAGTAGAGATCGTCAGAT+TGG 0.479506 tig0029172:+22532 Msa1440990:intron
GTCATCCCAGGCACCTCCCA+TGG 0.479573 tig0029172:+26345 Msa1440990:intron
TCATGAGAGTCGGGAGCAGA+AGG 0.482800 tig0029172:-21867 None:intergenic
TATTGTATCCAGCCCCGGTA+AGG 0.483813 tig0029172:-24637 None:intergenic
AAATACCTTCACTGATAAGA+TGG 0.485562 tig0029172:-22926 None:intergenic
GAGCAAGGAGAGTAAACCTT+TGG 0.486180 tig0029172:-26369 None:intergenic
GAATGCACGGGGCTCAGCTG+TGG 0.486691 tig0029172:-22669 None:intergenic
ATTCAAAACATATCAACATA+GGG 0.487004 tig0029172:+23373 Msa1440990:CDS
GAAATTGGTCTTATCTGAAA+AGG 0.487701 tig0029172:+23332 Msa1440990:CDS
TCATCACAATTCTAAAATCA+TGG 0.491870 tig0029172:+21776 Msa1440990:CDS
GTAGTACTGCTGAAAGAATC+GGG 0.493011 tig0029172:-24597 None:intergenic
AGTGTAATCAATCAGATTCA+AGG 0.500319 tig0029172:-26725 None:intergenic
TTCTGAGATATGTATTAGTC+CGG 0.505166 tig0029172:-23569 None:intergenic
GAGAGTAAACCTTTGGTCCA+TGG 0.508023 tig0029172:-26362 None:intergenic
ATTGAAAGGATTGACGATTG+AGG 0.512516 tig0029172:-21700 None:intergenic
AGAGTAAACCTTTGGTCCAT+GGG 0.520509 tig0029172:-26361 None:intergenic
TTGTCCAGAGTTTCTAGCAG+TGG 0.520893 tig0029172:-24147 None:intergenic
TTATAGTAGACGAGGAGAAA+CGG 0.524178 tig0029172:+23310 Msa1440990:CDS
CCTTGCTCGAGCTGGAAGAC+AGG 0.524839 tig0029172:+26384 Msa1440990:CDS
TGTTGATGGTGGAGAAGAAG+AGG 0.525498 tig0029172:-21559 None:intergenic
CCAATTCGCGTTGTTGATGG+TGG 0.528486 tig0029172:-21570 None:intergenic
TTGACGATTGAGGAAGAAGA+AGG 0.528513 tig0029172:-21690 None:intergenic
AAGAGCTATTGCAGGAAGAT+GGG 0.530885 tig0029172:+24664 Msa1440990:CDS
GTTCATCTGCGCTTCCCTGA+CGG 0.533095 tig0029172:+23444 Msa1440990:CDS
AGATCCACTGCTAGAAACTC+TGG 0.537122 tig0029172:+24143 Msa1440990:CDS
GTAAGAGACTTCTTAAGAGA+AGG 0.538732 tig0029172:+23616 Msa1440990:CDS
GTGGACTCATTTACAATGGT+AGG 0.540686 tig0029172:+22580 Msa1440990:CDS
GCTATCTTCTCTGCAACCCT+AGG 0.540971 tig0029172:+21615 Msa1440990:CDS
TGAAGCGATAGATAGAATAG+AGG 0.550543 tig0029172:-21492 None:intergenic
GTAGAGATCGTCAGATTGGA+AGG 0.553487 tig0029172:+22536 Msa1440990:intron
ACGAAGAGCATCATGAGAGT+CGG 0.553818 tig0029172:-21877 None:intergenic
AGCAAGAGTCGGTTCTGTTG+AGG 0.555824 tig0029172:+23407 Msa1440990:CDS
TGTTAGAATCGAAAGAGTGC+TGG 0.558273 tig0029172:-26931 None:intergenic
ACATGGCACCGAAGGAACCT+AGG 0.560207 tig0029172:-21632 None:intergenic
ATACCTTGACATGAATGCAC+GGG 0.560834 tig0029172:-22681 None:intergenic
AATGCACGGGGCTCAGCTGT+GGG 0.560934 tig0029172:-22668 None:intergenic
TACATATCTCAGAAGTGTCG+TGG 0.561533 tig0029172:+23578 Msa1440990:CDS
TCTTGTGATTATTATTGAGA+GGG 0.562540 tig0029172:-26749 None:intergenic
CAAGGTGGTGGTAACTTGCG+AGG 0.565879 tig0029172:-21735 None:intergenic
TAAGAGAAGGTGAAGAAGTG+AGG 0.569636 tig0029172:+23629 Msa1440990:CDS
AAGAGAAGGTGAAGAAGTGA+GGG 0.569971 tig0029172:+23630 Msa1440990:CDS
TGGACTCATTTACAATGGTA+GGG 0.572453 tig0029172:+22581 Msa1440990:CDS
AGATATGTATTAGTCCGGTA+AGG 0.575895 tig0029172:-23564 None:intergenic
GGGCATTTAGGGAAATTGAA+AGG 0.576571 tig0029172:-21714 None:intergenic
ATTGTATCCAGCCCCGGTAA+GGG 0.577307 tig0029172:-24636 None:intergenic
ATCTTGTGATTATTATTGAG+AGG 0.577327 tig0029172:-26750 None:intergenic
TAGAGTAAAACCGAACCAGC+AGG 0.577882 tig0029172:-22626 None:intergenic
CCTGTCTTCCAGCTCGAGCA+AGG 0.580250 tig0029172:-26384 None:intergenic
TAGTGCCACTGGCAAGGTGG+TGG 0.581006 tig0029172:-21747 None:intergenic
CGGTTCCATCTTATCAGTGA+AGG 0.581265 tig0029172:+22921 Msa1440990:CDS
TCAAGTATTGTATCCAGCCC+CGG 0.588559 tig0029172:-24642 None:intergenic
AGGCACCTCCCATGGACCAA+AGG 0.593592 tig0029172:+26353 Msa1440990:intron
TCTGGACAAAGTAATACCTC+AGG 0.594718 tig0029172:+24161 Msa1440990:CDS
GAGGAAGGACATGGCACCGA+AGG 0.595181 tig0029172:-21640 None:intergenic
TGATGCTCTTCGTCAAGCCA+GGG 0.599111 tig0029172:+21887 Msa1440990:CDS
TGATTGTGAAGATGAGAGGA+AGG 0.601524 tig0029172:-21655 None:intergenic
GTTGTGATTGTGAAGATGAG+AGG 0.605556 tig0029172:-21659 None:intergenic
AGCCCCGTGCATTCATGTCA+AGG 0.606788 tig0029172:+22678 Msa1440990:CDS
ACATATCTCAGAAGTGTCGT+GGG 0.608336 tig0029172:+23579 Msa1440990:CDS
TCTGAAAACATCCCTTGACC+AGG 0.610102 tig0029172:+26661 Msa1440990:CDS
CATGGCACCGAAGGAACCTA+GGG 0.612699 tig0029172:-21631 None:intergenic
GATGCAAGAATCAGTCGTCA+GGG 0.617292 tig0029172:+26206 Msa1440990:CDS
GAACTTGCAAGAGAGTTGAT+CGG 0.625345 tig0029172:+22901 Msa1440990:CDS
TGACGATTGAGGAAGAAGAA+GGG 0.626651 tig0029172:-21689 None:intergenic
TTGCATAGTAGTTACCGTCA+GGG 0.635380 tig0029172:-23458 None:intergenic
GATACCTTGACATGAATGCA+CGG 0.637484 tig0029172:-22682 None:intergenic
AAAACATCCCTTGACCAGGA+AGG 0.640351 tig0029172:+26665 Msa1440990:CDS
CATGAGAGTCGGGAGCAGAA+GGG 0.642717 tig0029172:-21866 None:intergenic
GATGATGACGATAGTGCCAC+TGG 0.643763 tig0029172:-21758 None:intergenic
AAGGTGGTGGTAACTTGCGA+GGG 0.646784 tig0029172:-21734 None:intergenic
GACAGTGGACTCATTTACAA+TGG 0.649720 tig0029172:+22576 Msa1440990:CDS
AGCCATTTCGAGTTCAACAA+CGG 0.657550 tig0029172:-21595 None:intergenic
TGAAGATGAGAGGAAGGACA+TGG 0.660623 tig0029172:-21649 None:intergenic
TTCAAAACATATCAACATAG+GGG 0.663132 tig0029172:+23374 Msa1440990:CDS
AGTTACCACCACCTTGCCAG+TGG 0.668620 tig0029172:+21742 Msa1440990:CDS
TGACGATAGTGCCACTGGCA+AGG 0.670149 tig0029172:-21753 None:intergenic
GTAAACCTTTGGTCCATGGG+AGG 0.670349 tig0029172:-26358 None:intergenic
ATGCAAGAATCAGTCGTCAG+GGG 0.684889 tig0029172:+26207 Msa1440990:CDS
CATATTGATGAATTCGACAG+TGG 0.686608 tig0029172:+21831 Msa1440990:CDS
GCAAACGCATATAGAGACAG+TGG 0.691753 tig0029172:+22561 Msa1440990:CDS
TTAGGTAATTATAGTAGACG+AGG 0.708605 tig0029172:+23302 Msa1440990:intron
TACCTTGACATGAATGCACG+GGG 0.710872 tig0029172:-22680 None:intergenic
GTCGCATCGATCCCTTACCG+GGG 0.720668 tig0029172:+24625 Msa1440990:CDS
CGATAGTGCCACTGGCAAGG+TGG 0.751025 tig0029172:-21750 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTTTTATTAAAAAAAAA+TGG + tig0029172:26297-26316 Msa1440990:intron 0.0%
!!! ATATTTTTATTAAAAAAAAA+TGG + tig0029172:26297-26316 Msa1440990:intron 0.0%
!!! CAACTTATATTTAAAATTTA+TGG + tig0029172:22083-22102 Msa1440990:intron 10.0%
!! TAATTACTATAAAAGAAATT+GGG - tig0029172:23810-23829 None:intergenic 10.0%
!! TTAATTACTATAAAAGAAAT+TGG - tig0029172:23811-23830 None:intergenic 10.0%
!!! TATAATTTATAAGCATATTT+TGG - tig0029172:24400-24419 None:intergenic 10.0%
!! TATGCTTATAAATTATAATT+AGG + tig0029172:24403-24422 Msa1440990:intron 10.0%
!! ATGCTTATAAATTATAATTA+GGG + tig0029172:24404-24423 Msa1440990:intron 10.0%
!! TAATATATTATTACAAAGAA+AGG + tig0029172:24794-24813 Msa1440990:intron 10.0%
!!! CAACTTATATTTAAAATTTA+TGG + tig0029172:22083-22102 Msa1440990:intron 10.0%
!! TAATTACTATAAAAGAAATT+GGG - tig0029172:23810-23829 None:intergenic 10.0%
!! TTAATTACTATAAAAGAAAT+TGG - tig0029172:23811-23830 None:intergenic 10.0%
!!! TATAATTTATAAGCATATTT+TGG - tig0029172:24400-24419 None:intergenic 10.0%
!! TATGCTTATAAATTATAATT+AGG + tig0029172:24403-24422 Msa1440990:intron 10.0%
!! ATGCTTATAAATTATAATTA+GGG + tig0029172:24404-24423 Msa1440990:intron 10.0%
!! TAATATATTATTACAAAGAA+AGG + tig0029172:24794-24813 Msa1440990:intron 10.0%
!! TTCAATTTAATCATAATAGT+AGG + tig0029172:22809-22828 Msa1440990:intron 15.0%
!! TGTCTTAAATTTATAAATGA+CGG + tig0029172:23264-23283 Msa1440990:intron 15.0%
!!! ATAGTAATTAACTATGTTTT+TGG + tig0029172:23820-23839 Msa1440990:intron 15.0%
!! TGCATATATAAATACTAAAT+AGG - tig0029172:24437-24456 None:intergenic 15.0%
!! TGAAATCCATAATAATATAA+TGG + tig0029172:25845-25864 Msa1440990:intron 15.0%
!! GAAATCCATAATAATATAAT+GGG + tig0029172:25846-25865 Msa1440990:intron 15.0%
!! AAATCCATAATAATATAATG+GGG + tig0029172:25847-25866 Msa1440990:intron 15.0%
!! TCATATATACATTATATTAG+GGG - tig0029172:26155-26174 None:intergenic 15.0%
!! GTCATATATACATTATATTA+GGG - tig0029172:26156-26175 None:intergenic 15.0%
!! TGTCATATATACATTATATT+AGG - tig0029172:26157-26176 None:intergenic 15.0%
!!! AATATATTTCTAATTTGTTG+AGG + tig0029172:26592-26611 Msa1440990:intron 15.0%
!! TAAAGTAAATTGTCAATAAA+CGG - tig0029172:26887-26906 None:intergenic 15.0%
!! TTCAATTTAATCATAATAGT+AGG + tig0029172:22809-22828 Msa1440990:intron 15.0%
!! TGTCTTAAATTTATAAATGA+CGG + tig0029172:23264-23283 Msa1440990:intron 15.0%
!!! ATAGTAATTAACTATGTTTT+TGG + tig0029172:23820-23839 Msa1440990:intron 15.0%
!! TGCATATATAAATACTAAAT+AGG - tig0029172:24437-24456 None:intergenic 15.0%
!! TGAAATCCATAATAATATAA+TGG + tig0029172:25845-25864 Msa1440990:intron 15.0%
!! GAAATCCATAATAATATAAT+GGG + tig0029172:25846-25865 Msa1440990:intron 15.0%
!! AAATCCATAATAATATAATG+GGG + tig0029172:25847-25866 Msa1440990:intron 15.0%
!! TCATATATACATTATATTAG+GGG - tig0029172:26155-26174 None:intergenic 15.0%
!! GTCATATATACATTATATTA+GGG - tig0029172:26156-26175 None:intergenic 15.0%
!! TGTCATATATACATTATATT+AGG - tig0029172:26157-26176 None:intergenic 15.0%
!!! AATATATTTCTAATTTGTTG+AGG + tig0029172:26592-26611 Msa1440990:intron 15.0%
!! TAAAGTAAATTGTCAATAAA+CGG - tig0029172:26887-26906 None:intergenic 15.0%
!! AAGTAAGTTTCTTTGTATTT+AGG + tig0029172:22014-22033 Msa1440990:intron 20.0%
!! AGTAAGTTTCTTTGTATTTA+GGG + tig0029172:22015-22034 Msa1440990:intron 20.0%
!!! TTATTTTCTCAAATTATCAG+CGG - tig0029172:22251-22270 None:intergenic 20.0%
!! AAAACTAATGTATATTCTTG+CGG + tig0029172:23069-23088 Msa1440990:intron 20.0%
!! TATTCAAAACATATCAACAT+AGG + tig0029172:23372-23391 Msa1440990:CDS 20.0%
!! ATTCAAAACATATCAACATA+GGG + tig0029172:23373-23392 Msa1440990:CDS 20.0%
!! TAATAGACTATTACTTTAGA+AGG - tig0029172:23699-23718 None:intergenic 20.0%
!! TTTCTATTATAAATGTTTGC+TGG + tig0029172:23744-23763 Msa1440990:intron 20.0%
!!! AACTTTTCTTTACAATAATG+AGG + tig0029172:23948-23967 Msa1440990:intron 20.0%
!! AGTAATTATCATACACAAAA+GGG - tig0029172:24225-24244 None:intergenic 20.0%
!! TAGTAATTATCATACACAAA+AGG - tig0029172:24226-24245 None:intergenic 20.0%
!! TTAAATACATTTATACACCA+AGG - tig0029172:24255-24274 None:intergenic 20.0%
!! TATTTATATATGCATGAATG+TGG + tig0029172:24443-24462 Msa1440990:intron 20.0%
!! ATTTATATATGCATGAATGT+GGG + tig0029172:24444-24463 Msa1440990:intron 20.0%
!! AAATTAGGTATATGTATCAA+AGG + tig0029172:25025-25044 Msa1440990:intron 20.0%
!! AGATAGAACTAGAATTAAAA+GGG + tig0029172:25196-25215 Msa1440990:intron 20.0%
!! TTTAGAGATGATTTATGATA+AGG + tig0029172:25224-25243 Msa1440990:intron 20.0%
!! AATCCATAATAATATAATGG+GGG + tig0029172:25848-25867 Msa1440990:intron 20.0%
!!! TTTTGATATCTGAATCTTTT+TGG + tig0029172:26323-26342 Msa1440990:intron 20.0%
!! AAGTAAGTTTCTTTGTATTT+AGG + tig0029172:22014-22033 Msa1440990:intron 20.0%
!! AGTAAGTTTCTTTGTATTTA+GGG + tig0029172:22015-22034 Msa1440990:intron 20.0%
!!! TTATTTTCTCAAATTATCAG+CGG - tig0029172:22251-22270 None:intergenic 20.0%
!! AAAACTAATGTATATTCTTG+CGG + tig0029172:23069-23088 Msa1440990:intron 20.0%
!! TATTCAAAACATATCAACAT+AGG + tig0029172:23372-23391 Msa1440990:CDS 20.0%
!! ATTCAAAACATATCAACATA+GGG + tig0029172:23373-23392 Msa1440990:CDS 20.0%
!! TAATAGACTATTACTTTAGA+AGG - tig0029172:23699-23718 None:intergenic 20.0%
!! TTTCTATTATAAATGTTTGC+TGG + tig0029172:23744-23763 Msa1440990:intron 20.0%
!!! AACTTTTCTTTACAATAATG+AGG + tig0029172:23948-23967 Msa1440990:intron 20.0%
!! AGTAATTATCATACACAAAA+GGG - tig0029172:24225-24244 None:intergenic 20.0%
!! TAGTAATTATCATACACAAA+AGG - tig0029172:24226-24245 None:intergenic 20.0%
!! TTAAATACATTTATACACCA+AGG - tig0029172:24255-24274 None:intergenic 20.0%
!! TATTTATATATGCATGAATG+TGG + tig0029172:24443-24462 Msa1440990:intron 20.0%
!! ATTTATATATGCATGAATGT+GGG + tig0029172:24444-24463 Msa1440990:intron 20.0%
!! AAATTAGGTATATGTATCAA+AGG + tig0029172:25025-25044 Msa1440990:intron 20.0%
!! AGATAGAACTAGAATTAAAA+GGG + tig0029172:25196-25215 Msa1440990:intron 20.0%
!! TTTAGAGATGATTTATGATA+AGG + tig0029172:25224-25243 Msa1440990:intron 20.0%
!! AATCCATAATAATATAATGG+GGG + tig0029172:25848-25867 Msa1440990:intron 20.0%
!!! TTTTGATATCTGAATCTTTT+TGG + tig0029172:26323-26342 Msa1440990:intron 20.0%
!!! AATTGGTTTGGATTGAATTT+TGG - tig0029172:21527-21546 None:intergenic 25.0%
!!! TCATCACAATTCTAAAATCA+TGG + tig0029172:21776-21795 Msa1440990:CDS 25.0%
! TTTCTTAATCCTATCAACTT+AGG + tig0029172:21946-21965 Msa1440990:intron 25.0%
!!! TAATATTCTCCTAAGTTGAT+AGG - tig0029172:21958-21977 None:intergenic 25.0%
! AGTGTAGTGACATAAATATT+AGG - tig0029172:22143-22162 None:intergenic 25.0%
! TTACAATAAACAACCAATGT+CGG - tig0029172:22392-22411 None:intergenic 25.0%
! TTGAAATGACTCAAATCATA+TGG - tig0029172:23103-23122 None:intergenic 25.0%
! TAAGAGTTTGATAGATTTCA+AGG - tig0029172:23138-23157 None:intergenic 25.0%
! TTCAAAACATATCAACATAG+GGG + tig0029172:23374-23393 Msa1440990:CDS 25.0%
! ATGCAAACTTTGTATGTTTA+TGG + tig0029172:23475-23494 Msa1440990:intron 25.0%
! TTTCCATGATAAAGTGAAAA+AGG - tig0029172:23504-23523 None:intergenic 25.0%
!! ACTTTAGAAGGCATAAATAT+TGG - tig0029172:23687-23706 None:intergenic 25.0%
!! TTTTACACTGCAAGATTAAA+TGG - tig0029172:24088-24107 None:intergenic 25.0%
!! ATTTAGTTTATACAAACCTG+AGG - tig0029172:24180-24199 None:intergenic 25.0%
! GATAATTACTATGTTATCCT+TGG + tig0029172:24235-24254 Msa1440990:intron 25.0%
! TAAATACTTCAAACAGTGAT+AGG - tig0029172:24696-24715 None:intergenic 25.0%
!! GTTTGAAGTATTTAACTACT+TGG + tig0029172:24702-24721 Msa1440990:intron 25.0%
! AAGAAATATTGAAACCGTAT+GGG - tig0029172:24762-24781 None:intergenic 25.0%
! AAAGAAATATTGAAACCGTA+TGG - tig0029172:24763-24782 None:intergenic 25.0%
! ATAGATAGTAATAATGCCTA+AGG + tig0029172:24817-24836 Msa1440990:intron 25.0%
! GCATACAAGATAATGAAATT+AGG + tig0029172:25010-25029 Msa1440990:intron 25.0%
! ATATGTATCAAAGGAAAATC+AGG + tig0029172:25034-25053 Msa1440990:intron 25.0%
! TATGTATCAAAGGAAAATCA+GGG + tig0029172:25035-25054 Msa1440990:intron 25.0%
! AGGACTAAATTATGAAAAGA+TGG + tig0029172:25059-25078 Msa1440990:intron 25.0%
! ACTAAATTATGAAAAGATGG+TGG + tig0029172:25062-25081 Msa1440990:intron 25.0%
! GAGATAGAACTAGAATTAAA+AGG + tig0029172:25195-25214 Msa1440990:intron 25.0%
! GATAGAACTAGAATTAAAAG+GGG + tig0029172:25197-25216 Msa1440990:intron 25.0%
! TCTCATTTACAATTATAGCA+TGG - tig0029172:25429-25448 None:intergenic 25.0%
! CAACAAAACTACATATTGTT+GGG - tig0029172:25529-25548 None:intergenic 25.0%
! TCAACAAAACTACATATTGT+TGG - tig0029172:25530-25549 None:intergenic 25.0%
!!! TCACTAGTTTTGTAAGTAAA+AGG - tig0029172:25596-25615 None:intergenic 25.0%
! TGTAATAAGGAAAACAAAGA+AGG - tig0029172:25677-25696 None:intergenic 25.0%
! CAAGAATAACAAAATTTCTG+TGG - tig0029172:25772-25791 None:intergenic 25.0%
! ATTCCCCCATTATATTATTA+TGG - tig0029172:25854-25873 None:intergenic 25.0%
! TCTCTTTATAAACACAACTA+GGG - tig0029172:26534-26553 None:intergenic 25.0%
! ATCTCTTTATAAACACAACT+AGG - tig0029172:26535-26554 None:intergenic 25.0%
! TCTTGTGATTATTATTGAGA+GGG - tig0029172:26752-26771 None:intergenic 25.0%
! ATCTTGTGATTATTATTGAG+AGG - tig0029172:26753-26772 None:intergenic 25.0%
! CAGCTTTCACATTTATTTAA+AGG + tig0029172:26779-26798 Msa1440990:three_prime_UTR 25.0%
! TAGTTAAATGAATCACGATT+TGG - tig0029172:26835-26854 None:intergenic 25.0%
!!! AATTGGTTTGGATTGAATTT+TGG - tig0029172:21527-21546 None:intergenic 25.0%
!!! TCATCACAATTCTAAAATCA+TGG + tig0029172:21776-21795 Msa1440990:CDS 25.0%
! TTTCTTAATCCTATCAACTT+AGG + tig0029172:21946-21965 Msa1440990:intron 25.0%
!!! TAATATTCTCCTAAGTTGAT+AGG - tig0029172:21958-21977 None:intergenic 25.0%
! AGTGTAGTGACATAAATATT+AGG - tig0029172:22143-22162 None:intergenic 25.0%
! TTACAATAAACAACCAATGT+CGG - tig0029172:22392-22411 None:intergenic 25.0%
! TTGAAATGACTCAAATCATA+TGG - tig0029172:23103-23122 None:intergenic 25.0%
! TAAGAGTTTGATAGATTTCA+AGG - tig0029172:23138-23157 None:intergenic 25.0%
! TTCAAAACATATCAACATAG+GGG + tig0029172:23374-23393 Msa1440990:CDS 25.0%
! ATGCAAACTTTGTATGTTTA+TGG + tig0029172:23475-23494 Msa1440990:intron 25.0%
! TTTCCATGATAAAGTGAAAA+AGG - tig0029172:23504-23523 None:intergenic 25.0%
!! ACTTTAGAAGGCATAAATAT+TGG - tig0029172:23687-23706 None:intergenic 25.0%
!! TTTTACACTGCAAGATTAAA+TGG - tig0029172:24088-24107 None:intergenic 25.0%
!! ATTTAGTTTATACAAACCTG+AGG - tig0029172:24180-24199 None:intergenic 25.0%
! GATAATTACTATGTTATCCT+TGG + tig0029172:24235-24254 Msa1440990:intron 25.0%
! TAAATACTTCAAACAGTGAT+AGG - tig0029172:24696-24715 None:intergenic 25.0%
!! GTTTGAAGTATTTAACTACT+TGG + tig0029172:24702-24721 Msa1440990:intron 25.0%
! AAGAAATATTGAAACCGTAT+GGG - tig0029172:24762-24781 None:intergenic 25.0%
! AAAGAAATATTGAAACCGTA+TGG - tig0029172:24763-24782 None:intergenic 25.0%
! ATAGATAGTAATAATGCCTA+AGG + tig0029172:24817-24836 Msa1440990:intron 25.0%
! GCATACAAGATAATGAAATT+AGG + tig0029172:25010-25029 Msa1440990:intron 25.0%
! ATATGTATCAAAGGAAAATC+AGG + tig0029172:25034-25053 Msa1440990:intron 25.0%
! TATGTATCAAAGGAAAATCA+GGG + tig0029172:25035-25054 Msa1440990:intron 25.0%
! AGGACTAAATTATGAAAAGA+TGG + tig0029172:25059-25078 Msa1440990:intron 25.0%
! ACTAAATTATGAAAAGATGG+TGG + tig0029172:25062-25081 Msa1440990:intron 25.0%
! GAGATAGAACTAGAATTAAA+AGG + tig0029172:25195-25214 Msa1440990:intron 25.0%
! GATAGAACTAGAATTAAAAG+GGG + tig0029172:25197-25216 Msa1440990:intron 25.0%
! TCTCATTTACAATTATAGCA+TGG - tig0029172:25429-25448 None:intergenic 25.0%
! CAACAAAACTACATATTGTT+GGG - tig0029172:25529-25548 None:intergenic 25.0%
! TCAACAAAACTACATATTGT+TGG - tig0029172:25530-25549 None:intergenic 25.0%
!!! TCACTAGTTTTGTAAGTAAA+AGG - tig0029172:25596-25615 None:intergenic 25.0%
! TGTAATAAGGAAAACAAAGA+AGG - tig0029172:25677-25696 None:intergenic 25.0%
! CAAGAATAACAAAATTTCTG+TGG - tig0029172:25772-25791 None:intergenic 25.0%
! ATTCCCCCATTATATTATTA+TGG - tig0029172:25854-25873 None:intergenic 25.0%
! TCTCTTTATAAACACAACTA+GGG - tig0029172:26534-26553 None:intergenic 25.0%
! ATCTCTTTATAAACACAACT+AGG - tig0029172:26535-26554 None:intergenic 25.0%
! TCTTGTGATTATTATTGAGA+GGG - tig0029172:26752-26771 None:intergenic 25.0%
! ATCTTGTGATTATTATTGAG+AGG - tig0029172:26753-26772 None:intergenic 25.0%
! CAGCTTTCACATTTATTTAA+AGG + tig0029172:26779-26798 Msa1440990:three_prime_UTR 25.0%
! TAGTTAAATGAATCACGATT+TGG - tig0029172:26835-26854 None:intergenic 25.0%
TTCGATGTAGCTTATAGTTA+AGG - tig0029172:22112-22131 None:intergenic 30.0%
TTATGTGTTGTATTTGCCAA+CGG + tig0029172:22169-22188 Msa1440990:intron 30.0%
!!! TGAACTTTTTGGTTCATGTT+CGG + tig0029172:22362-22381 Msa1440990:intron 30.0%
AAGCATTAAGGAAGAACATA+TGG - tig0029172:22711-22730 None:intergenic 30.0%
TATGTTCTTCCTTAATGCTT+TGG + tig0029172:22711-22730 Msa1440990:intron 30.0%
! TTGTGAAAACCAAAGCATTA+AGG - tig0029172:22723-22742 None:intergenic 30.0%
CACACAATTAAGTGACTAAA+TGG - tig0029172:22766-22785 None:intergenic 30.0%
CATTTAGTCACTTAATTGTG+TGG + tig0029172:22764-22783 Msa1440990:intron 30.0%
AATTTGCAATAAGTCAGTAG+TGG - tig0029172:22843-22862 None:intergenic 30.0%
!!! AGTTCTTGGATAGTTTTATC+TGG - tig0029172:22886-22905 None:intergenic 30.0%
AAATACCTTCACTGATAAGA+TGG - tig0029172:22929-22948 None:intergenic 30.0%
! GAAAGAAAAAGGTATATGGT+AGG - tig0029172:22962-22981 None:intergenic 30.0%
! ACAGGAAAGAAAAAGGTATA+TGG - tig0029172:22966-22985 None:intergenic 30.0%
ACCTAATTCAGCATAAACAA+CGG - tig0029172:23204-23223 None:intergenic 30.0%
TTAGGTAATTATAGTAGACG+AGG + tig0029172:23302-23321 Msa1440990:intron 30.0%
!! GAAATTGGTCTTATCTGAAA+AGG + tig0029172:23332-23351 Msa1440990:CDS 30.0%
!! CATCCTTTTTCACTTTATCA+TGG + tig0029172:23498-23517 Msa1440990:intron 30.0%
!! TTCTGAGATATGTATTAGTC+CGG - tig0029172:23572-23591 None:intergenic 30.0%
!! GTTTTAGTATCATTGCTTGT+TGG + tig0029172:23781-23800 Msa1440990:intron 30.0%
AAAATCCATTCACATGTCTT+GGG - tig0029172:24036-24055 None:intergenic 30.0%
TAAAATCCATTCACATGTCT+TGG - tig0029172:24037-24056 None:intergenic 30.0%
AAAAAAGTCAACATGCATGT+TGG - tig0029172:24063-24082 None:intergenic 30.0%
AATCTTGCAGTGTAAAAATG+AGG + tig0029172:24091-24110 Msa1440990:intron 30.0%
ATTATCATACACAAAAGGGA+CGG - tig0029172:24221-24240 None:intergenic 30.0%
ACACCTACTAATTTGAAAGA+GGG + tig0029172:24348-24367 Msa1440990:intron 30.0%
! ATGGATGTATCTCTGATTTT+GGG - tig0029172:24732-24751 None:intergenic 30.0%
AGAAATATTGAAACCGTATG+GGG - tig0029172:24761-24780 None:intergenic 30.0%
!! TTTACATTTTTGAGCCACTT+TGG - tig0029172:24881-24900 None:intergenic 30.0%
!!! GGTGTGGTTTCTTTTTTATT+AGG - tig0029172:24937-24956 None:intergenic 30.0%
! ATGTCTTGTGAAAGTGTAAT+GGG - tig0029172:24964-24983 None:intergenic 30.0%
ATGTATCAAAGGAAAATCAG+GGG + tig0029172:25036-25055 Msa1440990:intron 30.0%
ATCAGTAAGTCAGAGTTAAA+AGG + tig0029172:25142-25161 Msa1440990:intron 30.0%
!! TCATTTGATTACCGTTTTTC+TGG + tig0029172:25259-25278 Msa1440990:intron 30.0%
TACATAACTCTTGTTACTGT+TGG + tig0029172:25298-25317 Msa1440990:intron 30.0%
TAACTCATCATTACACTCAT+TGG + tig0029172:25460-25479 Msa1440990:intron 30.0%
AATAAGGAAAACAAAGAAGG+TGG - tig0029172:25674-25693 None:intergenic 30.0%
TCAACTCGTACATTGTAATA+AGG - tig0029172:25690-25709 None:intergenic 30.0%
TTTGCAATTTATCTGCATTC+AGG + tig0029172:26082-26101 Msa1440990:intron 30.0%
TTGCAATTTATCTGCATTCA+GGG + tig0029172:26083-26102 Msa1440990:intron 30.0%
AGTGTAATCAATCAGATTCA+AGG - tig0029172:26728-26747 None:intergenic 30.0%
CATTTAACTAACTCGCAAAA+AGG + tig0029172:26845-26864 Msa1440990:three_prime_UTR 30.0%
TTCGATGTAGCTTATAGTTA+AGG - tig0029172:22112-22131 None:intergenic 30.0%
TTATGTGTTGTATTTGCCAA+CGG + tig0029172:22169-22188 Msa1440990:intron 30.0%
!!! TGAACTTTTTGGTTCATGTT+CGG + tig0029172:22362-22381 Msa1440990:intron 30.0%
AAGCATTAAGGAAGAACATA+TGG - tig0029172:22711-22730 None:intergenic 30.0%
TATGTTCTTCCTTAATGCTT+TGG + tig0029172:22711-22730 Msa1440990:intron 30.0%
! TTGTGAAAACCAAAGCATTA+AGG - tig0029172:22723-22742 None:intergenic 30.0%
CACACAATTAAGTGACTAAA+TGG - tig0029172:22766-22785 None:intergenic 30.0%
CATTTAGTCACTTAATTGTG+TGG + tig0029172:22764-22783 Msa1440990:intron 30.0%
AATTTGCAATAAGTCAGTAG+TGG - tig0029172:22843-22862 None:intergenic 30.0%
!!! AGTTCTTGGATAGTTTTATC+TGG - tig0029172:22886-22905 None:intergenic 30.0%
AAATACCTTCACTGATAAGA+TGG - tig0029172:22929-22948 None:intergenic 30.0%
! GAAAGAAAAAGGTATATGGT+AGG - tig0029172:22962-22981 None:intergenic 30.0%
! ACAGGAAAGAAAAAGGTATA+TGG - tig0029172:22966-22985 None:intergenic 30.0%
ACCTAATTCAGCATAAACAA+CGG - tig0029172:23204-23223 None:intergenic 30.0%
TTAGGTAATTATAGTAGACG+AGG + tig0029172:23302-23321 Msa1440990:intron 30.0%
!! GAAATTGGTCTTATCTGAAA+AGG + tig0029172:23332-23351 Msa1440990:CDS 30.0%
!! CATCCTTTTTCACTTTATCA+TGG + tig0029172:23498-23517 Msa1440990:intron 30.0%
!! TTCTGAGATATGTATTAGTC+CGG - tig0029172:23572-23591 None:intergenic 30.0%
!! GTTTTAGTATCATTGCTTGT+TGG + tig0029172:23781-23800 Msa1440990:intron 30.0%
AAAATCCATTCACATGTCTT+GGG - tig0029172:24036-24055 None:intergenic 30.0%
TAAAATCCATTCACATGTCT+TGG - tig0029172:24037-24056 None:intergenic 30.0%
AAAAAAGTCAACATGCATGT+TGG - tig0029172:24063-24082 None:intergenic 30.0%
AATCTTGCAGTGTAAAAATG+AGG + tig0029172:24091-24110 Msa1440990:intron 30.0%
ATTATCATACACAAAAGGGA+CGG - tig0029172:24221-24240 None:intergenic 30.0%
ACACCTACTAATTTGAAAGA+GGG + tig0029172:24348-24367 Msa1440990:intron 30.0%
! ATGGATGTATCTCTGATTTT+GGG - tig0029172:24732-24751 None:intergenic 30.0%
AGAAATATTGAAACCGTATG+GGG - tig0029172:24761-24780 None:intergenic 30.0%
!! TTTACATTTTTGAGCCACTT+TGG - tig0029172:24881-24900 None:intergenic 30.0%
!!! GGTGTGGTTTCTTTTTTATT+AGG - tig0029172:24937-24956 None:intergenic 30.0%
! ATGTCTTGTGAAAGTGTAAT+GGG - tig0029172:24964-24983 None:intergenic 30.0%
ATGTATCAAAGGAAAATCAG+GGG + tig0029172:25036-25055 Msa1440990:intron 30.0%
ATCAGTAAGTCAGAGTTAAA+AGG + tig0029172:25142-25161 Msa1440990:intron 30.0%
!! TCATTTGATTACCGTTTTTC+TGG + tig0029172:25259-25278 Msa1440990:intron 30.0%
TACATAACTCTTGTTACTGT+TGG + tig0029172:25298-25317 Msa1440990:intron 30.0%
TAACTCATCATTACACTCAT+TGG + tig0029172:25460-25479 Msa1440990:intron 30.0%
AATAAGGAAAACAAAGAAGG+TGG - tig0029172:25674-25693 None:intergenic 30.0%
TCAACTCGTACATTGTAATA+AGG - tig0029172:25690-25709 None:intergenic 30.0%
TTTGCAATTTATCTGCATTC+AGG + tig0029172:26082-26101 Msa1440990:intron 30.0%
TTGCAATTTATCTGCATTCA+GGG + tig0029172:26083-26102 Msa1440990:intron 30.0%
AGTGTAATCAATCAGATTCA+AGG - tig0029172:26728-26747 None:intergenic 30.0%
CATTTAACTAACTCGCAAAA+AGG + tig0029172:26845-26864 Msa1440990:three_prime_UTR 30.0%
TGAAGCGATAGATAGAATAG+AGG - tig0029172:21495-21514 None:intergenic 35.0%
AAGAGGAAGATGAATTGGTT+TGG - tig0029172:21539-21558 None:intergenic 35.0%
ATTGAAAGGATTGACGATTG+AGG - tig0029172:21703-21722 None:intergenic 35.0%
CATATTGATGAATTCGACAG+TGG + tig0029172:21831-21850 Msa1440990:CDS 35.0%
AATTGAAGAAATACAGACCC+TGG - tig0029172:21907-21926 None:intergenic 35.0%
GGATTAAGCAACACAAAATG+TGG + tig0029172:22036-22055 Msa1440990:intron 35.0%
TATGTGTTGTATTTGCCAAC+GGG + tig0029172:22170-22189 Msa1440990:intron 35.0%
! GCACAAATGGTTGAACTTTT+TGG + tig0029172:22351-22370 Msa1440990:intron 35.0%
ACATTGCTTGTGATTCTCTT+TGG + tig0029172:22422-22441 Msa1440990:intron 35.0%
! TAGAACACAACACGTTTTAG+AGG - tig0029172:22495-22514 None:intergenic 35.0%
TGGACTCATTTACAATGGTA+GGG + tig0029172:22581-22600 Msa1440990:CDS 35.0%
ATTTACAATGGTAGGGTTGA+GGG + tig0029172:22588-22607 Msa1440990:CDS 35.0%
! GTTCGGTTTTACTCTATCAT+GGG + tig0029172:22633-22652 Msa1440990:CDS 35.0%
!! TGGCATCGATATAGTATCAT+AGG - tig0029172:22746-22765 None:intergenic 35.0%
!! TATCTGGTTCTGAACAGAAA+AGG - tig0029172:22870-22889 None:intergenic 35.0%
TGGATTCACAGGAAAGAAAA+AGG - tig0029172:22973-22992 None:intergenic 35.0%
AAATAGAGAAGCCGCAAATA+GGG - tig0029172:22997-23016 None:intergenic 35.0%
TAAATAGAGAAGCCGCAAAT+AGG - tig0029172:22998-23017 None:intergenic 35.0%
TTATGGTACCAAAATGATGC+AGG - tig0029172:23180-23199 None:intergenic 35.0%
!! TCAGCATAAACAACGGATTA+TGG - tig0029172:23197-23216 None:intergenic 35.0%
TCCGTTGTTTATGCTGAATT+AGG + tig0029172:23200-23219 Msa1440990:intron 35.0%
! ATATTTTCAACCTGCATGCT+TGG + tig0029172:23228-23247 Msa1440990:intron 35.0%
! ATTTGTTAAACCAAGCATGC+AGG - tig0029172:23241-23260 None:intergenic 35.0%
TGCATGCTTGGTTTAACAAA+TGG + tig0029172:23240-23259 Msa1440990:intron 35.0%
TTATAGTAGACGAGGAGAAA+CGG + tig0029172:23310-23329 Msa1440990:CDS 35.0%
TATCTGAAAAGGAAGCTTCA+TGG + tig0029172:23343-23362 Msa1440990:CDS 35.0%
AGATATGTATTAGTCCGGTA+AGG - tig0029172:23567-23586 None:intergenic 35.0%
GTAAGAGACTTCTTAAGAGA+AGG + tig0029172:23616-23635 Msa1440990:CDS 35.0%
CACACCTACTAATTTGAAAG+AGG + tig0029172:24347-24366 Msa1440990:intron 35.0%
AAGCCCTCTTTCAAATTAGT+AGG - tig0029172:24354-24373 None:intergenic 35.0%
TTGAAAGAGGGCTTGTATTT+AGG + tig0029172:24360-24379 Msa1440990:intron 35.0%
TGAAAGAGGGCTTGTATTTA+GGG + tig0029172:24361-24380 Msa1440990:intron 35.0%
! AACTCTGAGTTTCATTTTGC+AGG + tig0029172:24560-24579 Msa1440990:intron 35.0%
AGTAGTACTGCTGAAAGAAT+CGG - tig0029172:24601-24620 None:intergenic 35.0%
AATACTTGAAGAGCTATTGC+AGG + tig0029172:24656-24675 Msa1440990:CDS 35.0%
! GATGGATGTATCTCTGATTT+TGG - tig0029172:24733-24752 None:intergenic 35.0%
TTGGATGGTTTCTTATCCTT+AGG - tig0029172:24836-24855 None:intergenic 35.0%
!! TTTCGTTTTTCTGCATTGGA+TGG - tig0029172:24851-24870 None:intergenic 35.0%
CAAAAATGTAAACAGCTGCT+TGG + tig0029172:24889-24908 Msa1440990:intron 35.0%
! TGTGAAAGTGTAATGGGATA+AGG - tig0029172:24958-24977 None:intergenic 35.0%
! GATGTCTTGTGAAAGTGTAA+TGG - tig0029172:24965-24984 None:intergenic 35.0%
!! ATGAAAAGATGGTGGAATCT+CGG + tig0029172:25070-25089 Msa1440990:intron 35.0%
TACTGATCTGTTCTCTTTAC+TGG - tig0029172:25129-25148 None:intergenic 35.0%
TCAAGCAGTTTCCAGAAAAA+CGG - tig0029172:25273-25292 None:intergenic 35.0%
!! TGTTGATAATTGCTGCTCTT+TGG + tig0029172:25544-25563 Msa1440990:intron 35.0%
AAGAAGGTGGAACTATGTTA+TGG - tig0029172:25661-25680 None:intergenic 35.0%
GACTACTCATTTCCTATTCA+GGG - tig0029172:25890-25909 None:intergenic 35.0%
TGACTACTCATTTCCTATTC+AGG - tig0029172:25891-25910 None:intergenic 35.0%
TTGCAATTTCTCTGCATTCA+AGG - tig0029172:25921-25940 None:intergenic 35.0%
ACCAACAAAGTCTACATTCA+GGG - tig0029172:25950-25969 None:intergenic 35.0%
AGACTTTGTTGGTCAATTTC+AGG + tig0029172:25957-25976 Msa1440990:intron 35.0%
GACTTTGTTGGTCAATTTCA+GGG + tig0029172:25958-25977 Msa1440990:intron 35.0%
TCAGGGACTAAATTGACTAA+AGG + tig0029172:26007-26026 Msa1440990:intron 35.0%
ACTAAAAGAGTCTGCATTCA+GGG + tig0029172:26054-26073 Msa1440990:intron 35.0%
ATTTAGTCCCTGAATAGGAA+AGG - tig0029172:26124-26143 None:intergenic 35.0%
TAGTCATTTAGTCCCTGAAT+AGG - tig0029172:26129-26148 None:intergenic 35.0%
! ATCCACTTCATGATGATGTT+GGG + tig0029172:26506-26525 Msa1440990:intron 35.0%
AAAGGCAATACAACGAGTAT+TGG + tig0029172:26694-26713 Msa1440990:CDS 35.0%
TGAAGCGATAGATAGAATAG+AGG - tig0029172:21495-21514 None:intergenic 35.0%
AAGAGGAAGATGAATTGGTT+TGG - tig0029172:21539-21558 None:intergenic 35.0%
ATTGAAAGGATTGACGATTG+AGG - tig0029172:21703-21722 None:intergenic 35.0%
CATATTGATGAATTCGACAG+TGG + tig0029172:21831-21850 Msa1440990:CDS 35.0%
AATTGAAGAAATACAGACCC+TGG - tig0029172:21907-21926 None:intergenic 35.0%
GGATTAAGCAACACAAAATG+TGG + tig0029172:22036-22055 Msa1440990:intron 35.0%
TATGTGTTGTATTTGCCAAC+GGG + tig0029172:22170-22189 Msa1440990:intron 35.0%
! GCACAAATGGTTGAACTTTT+TGG + tig0029172:22351-22370 Msa1440990:intron 35.0%
ACATTGCTTGTGATTCTCTT+TGG + tig0029172:22422-22441 Msa1440990:intron 35.0%
! TAGAACACAACACGTTTTAG+AGG - tig0029172:22495-22514 None:intergenic 35.0%
TGGACTCATTTACAATGGTA+GGG + tig0029172:22581-22600 Msa1440990:CDS 35.0%
ATTTACAATGGTAGGGTTGA+GGG + tig0029172:22588-22607 Msa1440990:CDS 35.0%
! GTTCGGTTTTACTCTATCAT+GGG + tig0029172:22633-22652 Msa1440990:CDS 35.0%
!! TGGCATCGATATAGTATCAT+AGG - tig0029172:22746-22765 None:intergenic 35.0%
!! TATCTGGTTCTGAACAGAAA+AGG - tig0029172:22870-22889 None:intergenic 35.0%
TGGATTCACAGGAAAGAAAA+AGG - tig0029172:22973-22992 None:intergenic 35.0%
AAATAGAGAAGCCGCAAATA+GGG - tig0029172:22997-23016 None:intergenic 35.0%
TAAATAGAGAAGCCGCAAAT+AGG - tig0029172:22998-23017 None:intergenic 35.0%
TTATGGTACCAAAATGATGC+AGG - tig0029172:23180-23199 None:intergenic 35.0%
!! TCAGCATAAACAACGGATTA+TGG - tig0029172:23197-23216 None:intergenic 35.0%
TCCGTTGTTTATGCTGAATT+AGG + tig0029172:23200-23219 Msa1440990:intron 35.0%
! ATATTTTCAACCTGCATGCT+TGG + tig0029172:23228-23247 Msa1440990:intron 35.0%
! ATTTGTTAAACCAAGCATGC+AGG - tig0029172:23241-23260 None:intergenic 35.0%
TGCATGCTTGGTTTAACAAA+TGG + tig0029172:23240-23259 Msa1440990:intron 35.0%
TTATAGTAGACGAGGAGAAA+CGG + tig0029172:23310-23329 Msa1440990:CDS 35.0%
TATCTGAAAAGGAAGCTTCA+TGG + tig0029172:23343-23362 Msa1440990:CDS 35.0%
AGATATGTATTAGTCCGGTA+AGG - tig0029172:23567-23586 None:intergenic 35.0%
GTAAGAGACTTCTTAAGAGA+AGG + tig0029172:23616-23635 Msa1440990:CDS 35.0%
CACACCTACTAATTTGAAAG+AGG + tig0029172:24347-24366 Msa1440990:intron 35.0%
AAGCCCTCTTTCAAATTAGT+AGG - tig0029172:24354-24373 None:intergenic 35.0%
TTGAAAGAGGGCTTGTATTT+AGG + tig0029172:24360-24379 Msa1440990:intron 35.0%
TGAAAGAGGGCTTGTATTTA+GGG + tig0029172:24361-24380 Msa1440990:intron 35.0%
! AACTCTGAGTTTCATTTTGC+AGG + tig0029172:24560-24579 Msa1440990:intron 35.0%
AGTAGTACTGCTGAAAGAAT+CGG - tig0029172:24601-24620 None:intergenic 35.0%
AATACTTGAAGAGCTATTGC+AGG + tig0029172:24656-24675 Msa1440990:CDS 35.0%
! GATGGATGTATCTCTGATTT+TGG - tig0029172:24733-24752 None:intergenic 35.0%
TTGGATGGTTTCTTATCCTT+AGG - tig0029172:24836-24855 None:intergenic 35.0%
!! TTTCGTTTTTCTGCATTGGA+TGG - tig0029172:24851-24870 None:intergenic 35.0%
CAAAAATGTAAACAGCTGCT+TGG + tig0029172:24889-24908 Msa1440990:intron 35.0%
! TGTGAAAGTGTAATGGGATA+AGG - tig0029172:24958-24977 None:intergenic 35.0%
! GATGTCTTGTGAAAGTGTAA+TGG - tig0029172:24965-24984 None:intergenic 35.0%
!! ATGAAAAGATGGTGGAATCT+CGG + tig0029172:25070-25089 Msa1440990:intron 35.0%
TACTGATCTGTTCTCTTTAC+TGG - tig0029172:25129-25148 None:intergenic 35.0%
TCAAGCAGTTTCCAGAAAAA+CGG - tig0029172:25273-25292 None:intergenic 35.0%
!! TGTTGATAATTGCTGCTCTT+TGG + tig0029172:25544-25563 Msa1440990:intron 35.0%
AAGAAGGTGGAACTATGTTA+TGG - tig0029172:25661-25680 None:intergenic 35.0%
GACTACTCATTTCCTATTCA+GGG - tig0029172:25890-25909 None:intergenic 35.0%
TGACTACTCATTTCCTATTC+AGG - tig0029172:25891-25910 None:intergenic 35.0%
TTGCAATTTCTCTGCATTCA+AGG - tig0029172:25921-25940 None:intergenic 35.0%
ACCAACAAAGTCTACATTCA+GGG - tig0029172:25950-25969 None:intergenic 35.0%
AGACTTTGTTGGTCAATTTC+AGG + tig0029172:25957-25976 Msa1440990:intron 35.0%
GACTTTGTTGGTCAATTTCA+GGG + tig0029172:25958-25977 Msa1440990:intron 35.0%
TCAGGGACTAAATTGACTAA+AGG + tig0029172:26007-26026 Msa1440990:intron 35.0%
ACTAAAAGAGTCTGCATTCA+GGG + tig0029172:26054-26073 Msa1440990:intron 35.0%
ATTTAGTCCCTGAATAGGAA+AGG - tig0029172:26124-26143 None:intergenic 35.0%
TAGTCATTTAGTCCCTGAAT+AGG - tig0029172:26129-26148 None:intergenic 35.0%
! ATCCACTTCATGATGATGTT+GGG + tig0029172:26506-26525 Msa1440990:intron 35.0%
AAAGGCAATACAACGAGTAT+TGG + tig0029172:26694-26713 Msa1440990:CDS 35.0%
AGAGGAAGAGGAAGATGAAT+TGG - tig0029172:21544-21563 None:intergenic 40.0%
TTCCGTTGTTGAACTCGAAA+TGG + tig0029172:21593-21612 Msa1440990:exon 40.0%
!! AGCCATTTCGAGTTCAACAA+CGG - tig0029172:21598-21617 None:intergenic 40.0%
TGATTGTGAAGATGAGAGGA+AGG - tig0029172:21658-21677 None:intergenic 40.0%
GTTGTGATTGTGAAGATGAG+AGG - tig0029172:21662-21681 None:intergenic 40.0%
TGACGATTGAGGAAGAAGAA+GGG - tig0029172:21692-21711 None:intergenic 40.0%
TTGACGATTGAGGAAGAAGA+AGG - tig0029172:21693-21712 None:intergenic 40.0%
GGGCATTTAGGGAAATTGAA+AGG - tig0029172:21717-21736 None:intergenic 40.0%
ATGTGTTGTATTTGCCAACG+GGG + tig0029172:22171-22190 Msa1440990:intron 40.0%
AATCACAAGCAATGTCAGCA+AGG - tig0029172:22417-22436 None:intergenic 40.0%
TGAAGTAGAGATCGTCAGAT+TGG + tig0029172:22532-22551 Msa1440990:intron 40.0%
! GACAGTGGACTCATTTACAA+TGG + tig0029172:22576-22595 Msa1440990:CDS 40.0%
GTGGACTCATTTACAATGGT+AGG + tig0029172:22580-22599 Msa1440990:CDS 40.0%
CATTTACAATGGTAGGGTTG+AGG + tig0029172:22587-22606 Msa1440990:CDS 40.0%
!! GGTTCGGTTTTACTCTATCA+TGG + tig0029172:22632-22651 Msa1440990:CDS 40.0%
ATACCTTGACATGAATGCAC+GGG - tig0029172:22684-22703 None:intergenic 40.0%
GATACCTTGACATGAATGCA+CGG - tig0029172:22685-22704 None:intergenic 40.0%
! TCACTTAATTGTGTGGACTG+TGG + tig0029172:22771-22790 Msa1440990:intron 40.0%
TCAACTCTCTTGCAAGTTCT+TGG - tig0029172:22900-22919 None:intergenic 40.0%
! GAACTTGCAAGAGAGTTGAT+CGG + tig0029172:22901-22920 Msa1440990:CDS 40.0%
TGTGAATCCAACCCTATTTG+CGG + tig0029172:22983-23002 Msa1440990:intron 40.0%
TATTAGTCCAGCTGAAGCTT+CGG + tig0029172:23016-23035 Msa1440990:intron 40.0%
! TAGTGCTTCCTGCATCATTT+TGG + tig0029172:23169-23188 Msa1440990:intron 40.0%
!!! CGGCACTTTCTTTTGACTTT+AGG + tig0029172:23284-23303 Msa1440990:intron 40.0%
!!! GACCTTTTTGAAGCAAGAGT+CGG + tig0029172:23396-23415 Msa1440990:CDS 40.0%
! AACCGACTCTTGCTTCAAAA+AGG - tig0029172:23401-23420 None:intergenic 40.0%
TTGCATAGTAGTTACCGTCA+GGG - tig0029172:23461-23480 None:intergenic 40.0%
TTTGCATAGTAGTTACCGTC+AGG - tig0029172:23462-23481 None:intergenic 40.0%
!! TACATATCTCAGAAGTGTCG+TGG + tig0029172:23578-23597 Msa1440990:CDS 40.0%
!! ACATATCTCAGAAGTGTCGT+GGG + tig0029172:23579-23598 Msa1440990:CDS 40.0%
TAAGAGAAGGTGAAGAAGTG+AGG + tig0029172:23629-23648 Msa1440990:CDS 40.0%
AAGAGAAGGTGAAGAAGTGA+GGG + tig0029172:23630-23649 Msa1440990:CDS 40.0%
! TTCTGTCTTGAACCGACTTT+CGG + tig0029172:23870-23889 Msa1440990:intron 40.0%
ACAGCTTAGAAACCGAAAGT+CGG - tig0029172:23885-23904 None:intergenic 40.0%
TCTTGGGAGAGTTTATGACA+TGG - tig0029172:24020-24039 None:intergenic 40.0%
TCTGGACAAAGTAATACCTC+AGG + tig0029172:24161-24180 Msa1440990:CDS 40.0%
TACACGTCTGTGTGAATATG+TGG + tig0029172:24475-24494 Msa1440990:intron 40.0%
ACACGTCTGTGTGAATATGT+GGG + tig0029172:24476-24495 Msa1440990:intron 40.0%
TCACGCTCATACACACATTT+AGG - tig0029172:24512-24531 None:intergenic 40.0%
! CTGAGTTTCATTTTGCAGGA+TGG + tig0029172:24564-24583 Msa1440990:intron 40.0%
GTAGTACTGCTGAAAGAATC+GGG - tig0029172:24600-24619 None:intergenic 40.0%
AAGAGCTATTGCAGGAAGAT+GGG + tig0029172:24664-24683 Msa1440990:CDS 40.0%
!! CTGCTTTCGTTTTTCTGCAT+TGG - tig0029172:24855-24874 None:intergenic 40.0%
! AAGTGTAATGGGATAAGGTG+TGG - tig0029172:24953-24972 None:intergenic 40.0%
TATCAAAGGAAAATCAGGGG+AGG + tig0029172:25039-25058 Msa1440990:intron 40.0%
TCTCGTTATCCTACAAGCTA+AGG + tig0029172:25327-25346 Msa1440990:intron 40.0%
TATCCTACAAGCTAAGGAGA+TGG + tig0029172:25333-25352 Msa1440990:intron 40.0%
GTTGGGTGATTCAGACAATT+CGG - tig0029172:25512-25531 None:intergenic 40.0%
GTAAGTAAAAGGATCAGAGC+AGG - tig0029172:25585-25604 None:intergenic 40.0%
AAGGTGGAACTATGTTATGG+TGG - tig0029172:25658-25677 None:intergenic 40.0%
! AGTCACTTTAGTCCCTGAAT+AGG + tig0029172:25875-25894 Msa1440990:intron 40.0%
TCCCTGAATGTAGACTTTGT+TGG + tig0029172:25946-25965 Msa1440990:intron 40.0%
GACCAACAAAGTCTACATTC+AGG - tig0029172:25951-25970 None:intergenic 40.0%
TCAGGGACTAAAGTGACTAA+CGG + tig0029172:25975-25994 Msa1440990:intron 40.0%
ACTAACGGAGTCTACATTCA+GGG + tig0029172:25990-26009 Msa1440990:intron 40.0%
! ACTAAAGGAGTGTGCATTCA+TGG + tig0029172:26022-26041 Msa1440990:intron 40.0%
GACTAAAAGAGTCTGCATTC+AGG + tig0029172:26053-26072 Msa1440990:intron 40.0%
!! TGAATCTTTTTGGTCATCCC+AGG + tig0029172:26333-26352 Msa1440990:intron 40.0%
AGAGTAAACCTTTGGTCCAT+GGG - tig0029172:26364-26383 None:intergenic 40.0%
! CATCCACTTCATGATGATGT+TGG + tig0029172:26505-26524 Msa1440990:intron 40.0%
! TCCACTTCATGATGATGTTG+GGG + tig0029172:26507-26526 Msa1440990:intron 40.0%
! TGTTAGAATCGAAAGAGTGC+TGG - tig0029172:26934-26953 None:intergenic 40.0%
AGAGGAAGAGGAAGATGAAT+TGG - tig0029172:21544-21563 None:intergenic 40.0%
TTCCGTTGTTGAACTCGAAA+TGG + tig0029172:21593-21612 Msa1440990:exon 40.0%
!! AGCCATTTCGAGTTCAACAA+CGG - tig0029172:21598-21617 None:intergenic 40.0%
TGATTGTGAAGATGAGAGGA+AGG - tig0029172:21658-21677 None:intergenic 40.0%
GTTGTGATTGTGAAGATGAG+AGG - tig0029172:21662-21681 None:intergenic 40.0%
TGACGATTGAGGAAGAAGAA+GGG - tig0029172:21692-21711 None:intergenic 40.0%
TTGACGATTGAGGAAGAAGA+AGG - tig0029172:21693-21712 None:intergenic 40.0%
GGGCATTTAGGGAAATTGAA+AGG - tig0029172:21717-21736 None:intergenic 40.0%
ATGTGTTGTATTTGCCAACG+GGG + tig0029172:22171-22190 Msa1440990:intron 40.0%
AATCACAAGCAATGTCAGCA+AGG - tig0029172:22417-22436 None:intergenic 40.0%
TGAAGTAGAGATCGTCAGAT+TGG + tig0029172:22532-22551 Msa1440990:intron 40.0%
! GACAGTGGACTCATTTACAA+TGG + tig0029172:22576-22595 Msa1440990:CDS 40.0%
GTGGACTCATTTACAATGGT+AGG + tig0029172:22580-22599 Msa1440990:CDS 40.0%
CATTTACAATGGTAGGGTTG+AGG + tig0029172:22587-22606 Msa1440990:CDS 40.0%
!! GGTTCGGTTTTACTCTATCA+TGG + tig0029172:22632-22651 Msa1440990:CDS 40.0%
ATACCTTGACATGAATGCAC+GGG - tig0029172:22684-22703 None:intergenic 40.0%
GATACCTTGACATGAATGCA+CGG - tig0029172:22685-22704 None:intergenic 40.0%
! TCACTTAATTGTGTGGACTG+TGG + tig0029172:22771-22790 Msa1440990:intron 40.0%
TCAACTCTCTTGCAAGTTCT+TGG - tig0029172:22900-22919 None:intergenic 40.0%
! GAACTTGCAAGAGAGTTGAT+CGG + tig0029172:22901-22920 Msa1440990:CDS 40.0%
TGTGAATCCAACCCTATTTG+CGG + tig0029172:22983-23002 Msa1440990:intron 40.0%
TATTAGTCCAGCTGAAGCTT+CGG + tig0029172:23016-23035 Msa1440990:intron 40.0%
! TAGTGCTTCCTGCATCATTT+TGG + tig0029172:23169-23188 Msa1440990:intron 40.0%
!!! CGGCACTTTCTTTTGACTTT+AGG + tig0029172:23284-23303 Msa1440990:intron 40.0%
!!! GACCTTTTTGAAGCAAGAGT+CGG + tig0029172:23396-23415 Msa1440990:CDS 40.0%
! AACCGACTCTTGCTTCAAAA+AGG - tig0029172:23401-23420 None:intergenic 40.0%
TTGCATAGTAGTTACCGTCA+GGG - tig0029172:23461-23480 None:intergenic 40.0%
TTTGCATAGTAGTTACCGTC+AGG - tig0029172:23462-23481 None:intergenic 40.0%
!! TACATATCTCAGAAGTGTCG+TGG + tig0029172:23578-23597 Msa1440990:CDS 40.0%
!! ACATATCTCAGAAGTGTCGT+GGG + tig0029172:23579-23598 Msa1440990:CDS 40.0%
TAAGAGAAGGTGAAGAAGTG+AGG + tig0029172:23629-23648 Msa1440990:CDS 40.0%
AAGAGAAGGTGAAGAAGTGA+GGG + tig0029172:23630-23649 Msa1440990:CDS 40.0%
! TTCTGTCTTGAACCGACTTT+CGG + tig0029172:23870-23889 Msa1440990:intron 40.0%
ACAGCTTAGAAACCGAAAGT+CGG - tig0029172:23885-23904 None:intergenic 40.0%
TCTTGGGAGAGTTTATGACA+TGG - tig0029172:24020-24039 None:intergenic 40.0%
TCTGGACAAAGTAATACCTC+AGG + tig0029172:24161-24180 Msa1440990:CDS 40.0%
TACACGTCTGTGTGAATATG+TGG + tig0029172:24475-24494 Msa1440990:intron 40.0%
ACACGTCTGTGTGAATATGT+GGG + tig0029172:24476-24495 Msa1440990:intron 40.0%
TCACGCTCATACACACATTT+AGG - tig0029172:24512-24531 None:intergenic 40.0%
! CTGAGTTTCATTTTGCAGGA+TGG + tig0029172:24564-24583 Msa1440990:intron 40.0%
GTAGTACTGCTGAAAGAATC+GGG - tig0029172:24600-24619 None:intergenic 40.0%
AAGAGCTATTGCAGGAAGAT+GGG + tig0029172:24664-24683 Msa1440990:CDS 40.0%
!! CTGCTTTCGTTTTTCTGCAT+TGG - tig0029172:24855-24874 None:intergenic 40.0%
! AAGTGTAATGGGATAAGGTG+TGG - tig0029172:24953-24972 None:intergenic 40.0%
TATCAAAGGAAAATCAGGGG+AGG + tig0029172:25039-25058 Msa1440990:intron 40.0%
TCTCGTTATCCTACAAGCTA+AGG + tig0029172:25327-25346 Msa1440990:intron 40.0%
TATCCTACAAGCTAAGGAGA+TGG + tig0029172:25333-25352 Msa1440990:intron 40.0%
GTTGGGTGATTCAGACAATT+CGG - tig0029172:25512-25531 None:intergenic 40.0%
GTAAGTAAAAGGATCAGAGC+AGG - tig0029172:25585-25604 None:intergenic 40.0%
AAGGTGGAACTATGTTATGG+TGG - tig0029172:25658-25677 None:intergenic 40.0%
! AGTCACTTTAGTCCCTGAAT+AGG + tig0029172:25875-25894 Msa1440990:intron 40.0%
TCCCTGAATGTAGACTTTGT+TGG + tig0029172:25946-25965 Msa1440990:intron 40.0%
GACCAACAAAGTCTACATTC+AGG - tig0029172:25951-25970 None:intergenic 40.0%
TCAGGGACTAAAGTGACTAA+CGG + tig0029172:25975-25994 Msa1440990:intron 40.0%
ACTAACGGAGTCTACATTCA+GGG + tig0029172:25990-26009 Msa1440990:intron 40.0%
! ACTAAAGGAGTGTGCATTCA+TGG + tig0029172:26022-26041 Msa1440990:intron 40.0%
GACTAAAAGAGTCTGCATTC+AGG + tig0029172:26053-26072 Msa1440990:intron 40.0%
!! TGAATCTTTTTGGTCATCCC+AGG + tig0029172:26333-26352 Msa1440990:intron 40.0%
AGAGTAAACCTTTGGTCCAT+GGG - tig0029172:26364-26383 None:intergenic 40.0%
! CATCCACTTCATGATGATGT+TGG + tig0029172:26505-26524 Msa1440990:intron 40.0%
! TCCACTTCATGATGATGTTG+GGG + tig0029172:26507-26526 Msa1440990:intron 40.0%
! TGTTAGAATCGAAAGAGTGC+TGG - tig0029172:26934-26953 None:intergenic 40.0%
!! TGTTGATGGTGGAGAAGAAG+AGG - tig0029172:21562-21581 None:intergenic 45.0%
GAACCAATTCGCGTTGTTGA+TGG - tig0029172:21576-21595 None:intergenic 45.0%
TGAAGATGAGAGGAAGGACA+TGG - tig0029172:21652-21671 None:intergenic 45.0%
!! GTAACTTGCGAGGGCATTTA+GGG - tig0029172:21728-21747 None:intergenic 45.0%
!! ACGAAGAGCATCATGAGAGT+CGG - tig0029172:21880-21899 None:intergenic 45.0%
TGTGTTGTATTTGCCAACGG+GGG + tig0029172:22172-22191 Msa1440990:intron 45.0%
TTGTGCCAACCTATGAAGCA+CGG - tig0029172:22337-22356 None:intergenic 45.0%
! GCTTCATAGGTTGGCACAAA+TGG + tig0029172:22338-22357 Msa1440990:intron 45.0%
GTAGAGATCGTCAGATTGGA+AGG + tig0029172:22536-22555 Msa1440990:intron 45.0%
GCAAACGCATATAGAGACAG+TGG + tig0029172:22561-22580 Msa1440990:CDS 45.0%
!! AGGGTTGAGGGTTTTAATGC+TGG + tig0029172:22600-22619 Msa1440990:CDS 45.0%
!! GTTGAGGGTTTTAATGCTGG+AGG + tig0029172:22603-22622 Msa1440990:CDS 45.0%
TAGAGTAAAACCGAACCAGC+AGG - tig0029172:22629-22648 None:intergenic 45.0%
TACCTTGACATGAATGCACG+GGG - tig0029172:22683-22702 None:intergenic 45.0%
CGGTTCCATCTTATCAGTGA+AGG + tig0029172:22921-22940 Msa1440990:CDS 45.0%
GCAAATAGGGTTGGATTCAC+AGG - tig0029172:22984-23003 None:intergenic 45.0%
! TTTTATGCCGAAGCTTCAGC+TGG - tig0029172:23026-23045 None:intergenic 45.0%
AGACGAGGAGAAACGGAAAT+TGG + tig0029172:23317-23336 Msa1440990:CDS 45.0%
GCAGGTCTTTATCACCTTAC+CGG + tig0029172:23550-23569 Msa1440990:intron 45.0%
ACTCTCCCAAGACATGTGAA+TGG + tig0029172:24028-24047 Msa1440990:intron 45.0%
AGATCCACTGCTAGAAACTC+TGG + tig0029172:24143-24162 Msa1440990:CDS 45.0%
!! TTGTCCAGAGTTTCTAGCAG+TGG - tig0029172:24150-24169 None:intergenic 45.0%
TCATACACAAAAGGGACGGA+GGG - tig0029172:24217-24236 None:intergenic 45.0%
ATCATACACAAAAGGGACGG+AGG - tig0029172:24218-24237 None:intergenic 45.0%
CACGTCTGTGTGAATATGTG+GGG + tig0029172:24477-24496 Msa1440990:intron 45.0%
! TCAAGTATTGTATCCAGCCC+CGG - tig0029172:24645-24664 None:intergenic 45.0%
GAAGAGCTATTGCAGGAAGA+TGG + tig0029172:24663-24682 Msa1440990:CDS 45.0%
ATTGAAACCGTATGGGGCAA+GGG - tig0029172:24755-24774 None:intergenic 45.0%
TATTGAAACCGTATGGGGCA+AGG - tig0029172:24756-24775 None:intergenic 45.0%
AACGAAAGCAGATGCCAAAG+TGG + tig0029172:24864-24883 Msa1440990:intron 45.0%
!! GATGGTGGAATCTCGGTATT+AGG + tig0029172:25077-25096 Msa1440990:intron 45.0%
!! CAACCATCTCCTTAGCTTGT+AGG - tig0029172:25339-25358 None:intergenic 45.0%
CAGACAATTCGGATGTAGAC+TGG - tig0029172:25501-25520 None:intergenic 45.0%
AAAGGATCAGAGCAGGTCTT+AGG - tig0029172:25578-25597 None:intergenic 45.0%
GACTAACGGAGTCTACATTC+AGG + tig0029172:25989-26008 Msa1440990:intron 45.0%
TGACGACTCCTTTCCTATTC+AGG + tig0029172:26113-26132 Msa1440990:intron 45.0%
GACGACTCCTTTCCTATTCA+GGG + tig0029172:26114-26133 Msa1440990:intron 45.0%
GATGCAAGAATCAGTCGTCA+GGG + tig0029172:26206-26225 Msa1440990:CDS 45.0%
ATGCAAGAATCAGTCGTCAG+GGG + tig0029172:26207-26226 Msa1440990:CDS 45.0%
TCAGGGGTTTGAAAAACGAG+TGG + tig0029172:26223-26242 Msa1440990:CDS 45.0%
TCTCACAAGACTTGCAGCTT+TGG + tig0029172:26246-26265 Msa1440990:CDS 45.0%
GAGAGTAAACCTTTGGTCCA+TGG - tig0029172:26365-26384 None:intergenic 45.0%
GAGCAAGGAGAGTAAACCTT+TGG - tig0029172:26372-26391 None:intergenic 45.0%
ACCCCAACATCATCATGAAG+TGG - tig0029172:26511-26530 None:intergenic 45.0%
ATGTATCTCCTGAACCTGGA+TGG - tig0029172:26642-26661 None:intergenic 45.0%
TCAGATGTATCTCCTGAACC+TGG - tig0029172:26646-26665 None:intergenic 45.0%
TCTGAAAACATCCCTTGACC+AGG + tig0029172:26661-26680 Msa1440990:CDS 45.0%
AAAACATCCCTTGACCAGGA+AGG + tig0029172:26665-26684 Msa1440990:CDS 45.0%
TTTGATGCCTTCCTGGTCAA+GGG - tig0029172:26675-26694 None:intergenic 45.0%
! TTTTGATGCCTTCCTGGTCA+AGG - tig0029172:26676-26695 None:intergenic 45.0%
!! TGACCAGGAAGGCATCAAAA+AGG + tig0029172:26676-26695 Msa1440990:CDS 45.0%
! TTGCCTTTTTGATGCCTTCC+TGG - tig0029172:26682-26701 None:intergenic 45.0%
!! TGTTGATGGTGGAGAAGAAG+AGG - tig0029172:21562-21581 None:intergenic 45.0%
GAACCAATTCGCGTTGTTGA+TGG - tig0029172:21576-21595 None:intergenic 45.0%
TGAAGATGAGAGGAAGGACA+TGG - tig0029172:21652-21671 None:intergenic 45.0%
!! GTAACTTGCGAGGGCATTTA+GGG - tig0029172:21728-21747 None:intergenic 45.0%
!! ACGAAGAGCATCATGAGAGT+CGG - tig0029172:21880-21899 None:intergenic 45.0%
TGTGTTGTATTTGCCAACGG+GGG + tig0029172:22172-22191 Msa1440990:intron 45.0%
TTGTGCCAACCTATGAAGCA+CGG - tig0029172:22337-22356 None:intergenic 45.0%
! GCTTCATAGGTTGGCACAAA+TGG + tig0029172:22338-22357 Msa1440990:intron 45.0%
GTAGAGATCGTCAGATTGGA+AGG + tig0029172:22536-22555 Msa1440990:intron 45.0%
GCAAACGCATATAGAGACAG+TGG + tig0029172:22561-22580 Msa1440990:CDS 45.0%
!! AGGGTTGAGGGTTTTAATGC+TGG + tig0029172:22600-22619 Msa1440990:CDS 45.0%
!! GTTGAGGGTTTTAATGCTGG+AGG + tig0029172:22603-22622 Msa1440990:CDS 45.0%
TAGAGTAAAACCGAACCAGC+AGG - tig0029172:22629-22648 None:intergenic 45.0%
TACCTTGACATGAATGCACG+GGG - tig0029172:22683-22702 None:intergenic 45.0%
CGGTTCCATCTTATCAGTGA+AGG + tig0029172:22921-22940 Msa1440990:CDS 45.0%
GCAAATAGGGTTGGATTCAC+AGG - tig0029172:22984-23003 None:intergenic 45.0%
! TTTTATGCCGAAGCTTCAGC+TGG - tig0029172:23026-23045 None:intergenic 45.0%
AGACGAGGAGAAACGGAAAT+TGG + tig0029172:23317-23336 Msa1440990:CDS 45.0%
GCAGGTCTTTATCACCTTAC+CGG + tig0029172:23550-23569 Msa1440990:intron 45.0%
ACTCTCCCAAGACATGTGAA+TGG + tig0029172:24028-24047 Msa1440990:intron 45.0%
AGATCCACTGCTAGAAACTC+TGG + tig0029172:24143-24162 Msa1440990:CDS 45.0%
!! TTGTCCAGAGTTTCTAGCAG+TGG - tig0029172:24150-24169 None:intergenic 45.0%
TCATACACAAAAGGGACGGA+GGG - tig0029172:24217-24236 None:intergenic 45.0%
ATCATACACAAAAGGGACGG+AGG - tig0029172:24218-24237 None:intergenic 45.0%
CACGTCTGTGTGAATATGTG+GGG + tig0029172:24477-24496 Msa1440990:intron 45.0%
! TCAAGTATTGTATCCAGCCC+CGG - tig0029172:24645-24664 None:intergenic 45.0%
GAAGAGCTATTGCAGGAAGA+TGG + tig0029172:24663-24682 Msa1440990:CDS 45.0%
ATTGAAACCGTATGGGGCAA+GGG - tig0029172:24755-24774 None:intergenic 45.0%
TATTGAAACCGTATGGGGCA+AGG - tig0029172:24756-24775 None:intergenic 45.0%
AACGAAAGCAGATGCCAAAG+TGG + tig0029172:24864-24883 Msa1440990:intron 45.0%
!! GATGGTGGAATCTCGGTATT+AGG + tig0029172:25077-25096 Msa1440990:intron 45.0%
!! CAACCATCTCCTTAGCTTGT+AGG - tig0029172:25339-25358 None:intergenic 45.0%
CAGACAATTCGGATGTAGAC+TGG - tig0029172:25501-25520 None:intergenic 45.0%
AAAGGATCAGAGCAGGTCTT+AGG - tig0029172:25578-25597 None:intergenic 45.0%
GACTAACGGAGTCTACATTC+AGG + tig0029172:25989-26008 Msa1440990:intron 45.0%
TGACGACTCCTTTCCTATTC+AGG + tig0029172:26113-26132 Msa1440990:intron 45.0%
GACGACTCCTTTCCTATTCA+GGG + tig0029172:26114-26133 Msa1440990:intron 45.0%
GATGCAAGAATCAGTCGTCA+GGG + tig0029172:26206-26225 Msa1440990:CDS 45.0%
ATGCAAGAATCAGTCGTCAG+GGG + tig0029172:26207-26226 Msa1440990:CDS 45.0%
TCAGGGGTTTGAAAAACGAG+TGG + tig0029172:26223-26242 Msa1440990:CDS 45.0%
TCTCACAAGACTTGCAGCTT+TGG + tig0029172:26246-26265 Msa1440990:CDS 45.0%
GAGAGTAAACCTTTGGTCCA+TGG - tig0029172:26365-26384 None:intergenic 45.0%
GAGCAAGGAGAGTAAACCTT+TGG - tig0029172:26372-26391 None:intergenic 45.0%
ACCCCAACATCATCATGAAG+TGG - tig0029172:26511-26530 None:intergenic 45.0%
ATGTATCTCCTGAACCTGGA+TGG - tig0029172:26642-26661 None:intergenic 45.0%
TCAGATGTATCTCCTGAACC+TGG - tig0029172:26646-26665 None:intergenic 45.0%
TCTGAAAACATCCCTTGACC+AGG + tig0029172:26661-26680 Msa1440990:CDS 45.0%
AAAACATCCCTTGACCAGGA+AGG + tig0029172:26665-26684 Msa1440990:CDS 45.0%
TTTGATGCCTTCCTGGTCAA+GGG - tig0029172:26675-26694 None:intergenic 45.0%
! TTTTGATGCCTTCCTGGTCA+AGG - tig0029172:26676-26695 None:intergenic 45.0%
!! TGACCAGGAAGGCATCAAAA+AGG + tig0029172:26676-26695 Msa1440990:CDS 45.0%
! TTGCCTTTTTGATGCCTTCC+TGG - tig0029172:26682-26701 None:intergenic 45.0%
TGGTGGAGAAGAAGAGGAAG+AGG - tig0029172:21556-21575 None:intergenic 50.0%
! CCAATTCGCGTTGTTGATGG+TGG - tig0029172:21573-21592 None:intergenic 50.0%
CCACCATCAACAACGCGAAT+TGG + tig0029172:21570-21589 Msa1440990:five_prime_UTR 50.0%
GCTATCTTCTCTGCAACCCT+AGG + tig0029172:21615-21634 Msa1440990:CDS 50.0%
TCTGCAACCCTAGGTTCCTT+CGG + tig0029172:21624-21643 Msa1440990:CDS 50.0%
!! GGTAACTTGCGAGGGCATTT+AGG - tig0029172:21729-21748 None:intergenic 50.0%
! AAGGTGGTGGTAACTTGCGA+GGG - tig0029172:21737-21756 None:intergenic 50.0%
! GATGATGACGATAGTGCCAC+TGG - tig0029172:21761-21780 None:intergenic 50.0%
!! CGAAGAGCATCATGAGAGTC+GGG - tig0029172:21879-21898 None:intergenic 50.0%
ATGATGCTCTTCGTCAAGCC+AGG + tig0029172:21886-21905 Msa1440990:CDS 50.0%
TGATGCTCTTCGTCAAGCCA+GGG + tig0029172:21887-21906 Msa1440990:CDS 50.0%
TTGTATTTGCCAACGGGGGT+TGG + tig0029172:22176-22195 Msa1440990:intron 50.0%
! GGGTTGGCACCTATGAAGTA+CGG + tig0029172:22192-22211 Msa1440990:intron 50.0%
GCACCTATGAAGTACGGACA+CGG + tig0029172:22198-22217 Msa1440990:intron 50.0%
GTTCCGTGTCCGTACTTCAT+AGG - tig0029172:22204-22223 None:intergenic 50.0%
ATATGTGTCGTGTCCGACAC+TGG + tig0029172:22288-22307 Msa1440990:intron 50.0%
TATGTGTCGTGTCCGACACT+GGG + tig0029172:22289-22308 Msa1440990:intron 50.0%
GATTAGGCGTATCCCAGTGT+CGG - tig0029172:22304-22323 None:intergenic 50.0%
CAACCTATGAAGCACGGACA+CGG - tig0029172:22331-22350 None:intergenic 50.0%
CATGTTCGGAACTCCGACAT+TGG + tig0029172:22376-22395 Msa1440990:intron 50.0%
! TTTTAATGCTGGAGGCCTGC+TGG + tig0029172:22611-22630 Msa1440990:CDS 50.0%
AGAGAAGCCGCAAATAGGGT+TGG - tig0029172:22993-23012 None:intergenic 50.0%
! AGCAAGAGTCGGTTCTGTTG+AGG + tig0029172:23407-23426 Msa1440990:CDS 50.0%
! GTCGGTTCTGTTGAGGACTA+TGG + tig0029172:23414-23433 Msa1440990:CDS 50.0%
GTGACATCACAGAATGCTGC+AGG + tig0029172:23532-23551 Msa1440990:intron 50.0%
ATTGTATCCAGCCCCGGTAA+GGG - tig0029172:24639-24658 None:intergenic 50.0%
TATTGTATCCAGCCCCGGTA+AGG - tig0029172:24640-24659 None:intergenic 50.0%
AGACATCCTTGATTGCTGCG+CGG + tig0029172:24978-24997 Msa1440990:intron 50.0%
CGATGCAAGAATCAGTCGTC+AGG + tig0029172:26205-26224 Msa1440990:CDS 50.0%
GTAAACCTTTGGTCCATGGG+AGG - tig0029172:26361-26380 None:intergenic 50.0%
TTTACTCTCCTTGCTCGAGC+TGG + tig0029172:26376-26395 Msa1440990:CDS 50.0%
ATCCTGTGTGTGATCCATCC+AGG + tig0029172:26625-26644 Msa1440990:intron 50.0%
AACCTGGATGGATCACACAC+AGG - tig0029172:26630-26649 None:intergenic 50.0%
TGTGTGATCCATCCAGGTTC+AGG + tig0029172:26631-26650 Msa1440990:intron 50.0%
TGGTGGAGAAGAAGAGGAAG+AGG - tig0029172:21556-21575 None:intergenic 50.0%
! CCAATTCGCGTTGTTGATGG+TGG - tig0029172:21573-21592 None:intergenic 50.0%
CCACCATCAACAACGCGAAT+TGG + tig0029172:21570-21589 Msa1440990:five_prime_UTR 50.0%
GCTATCTTCTCTGCAACCCT+AGG + tig0029172:21615-21634 Msa1440990:CDS 50.0%
TCTGCAACCCTAGGTTCCTT+CGG + tig0029172:21624-21643 Msa1440990:CDS 50.0%
!! GGTAACTTGCGAGGGCATTT+AGG - tig0029172:21729-21748 None:intergenic 50.0%
! AAGGTGGTGGTAACTTGCGA+GGG - tig0029172:21737-21756 None:intergenic 50.0%
! GATGATGACGATAGTGCCAC+TGG - tig0029172:21761-21780 None:intergenic 50.0%
!! CGAAGAGCATCATGAGAGTC+GGG - tig0029172:21879-21898 None:intergenic 50.0%
ATGATGCTCTTCGTCAAGCC+AGG + tig0029172:21886-21905 Msa1440990:CDS 50.0%
TGATGCTCTTCGTCAAGCCA+GGG + tig0029172:21887-21906 Msa1440990:CDS 50.0%
TTGTATTTGCCAACGGGGGT+TGG + tig0029172:22176-22195 Msa1440990:intron 50.0%
! GGGTTGGCACCTATGAAGTA+CGG + tig0029172:22192-22211 Msa1440990:intron 50.0%
GCACCTATGAAGTACGGACA+CGG + tig0029172:22198-22217 Msa1440990:intron 50.0%
GTTCCGTGTCCGTACTTCAT+AGG - tig0029172:22204-22223 None:intergenic 50.0%
ATATGTGTCGTGTCCGACAC+TGG + tig0029172:22288-22307 Msa1440990:intron 50.0%
TATGTGTCGTGTCCGACACT+GGG + tig0029172:22289-22308 Msa1440990:intron 50.0%
GATTAGGCGTATCCCAGTGT+CGG - tig0029172:22304-22323 None:intergenic 50.0%
CAACCTATGAAGCACGGACA+CGG - tig0029172:22331-22350 None:intergenic 50.0%
CATGTTCGGAACTCCGACAT+TGG + tig0029172:22376-22395 Msa1440990:intron 50.0%
! TTTTAATGCTGGAGGCCTGC+TGG + tig0029172:22611-22630 Msa1440990:CDS 50.0%
AGAGAAGCCGCAAATAGGGT+TGG - tig0029172:22993-23012 None:intergenic 50.0%
! AGCAAGAGTCGGTTCTGTTG+AGG + tig0029172:23407-23426 Msa1440990:CDS 50.0%
! GTCGGTTCTGTTGAGGACTA+TGG + tig0029172:23414-23433 Msa1440990:CDS 50.0%
GTGACATCACAGAATGCTGC+AGG + tig0029172:23532-23551 Msa1440990:intron 50.0%
ATTGTATCCAGCCCCGGTAA+GGG - tig0029172:24639-24658 None:intergenic 50.0%
TATTGTATCCAGCCCCGGTA+AGG - tig0029172:24640-24659 None:intergenic 50.0%
AGACATCCTTGATTGCTGCG+CGG + tig0029172:24978-24997 Msa1440990:intron 50.0%
CGATGCAAGAATCAGTCGTC+AGG + tig0029172:26205-26224 Msa1440990:CDS 50.0%
GTAAACCTTTGGTCCATGGG+AGG - tig0029172:26361-26380 None:intergenic 50.0%
TTTACTCTCCTTGCTCGAGC+TGG + tig0029172:26376-26395 Msa1440990:CDS 50.0%
ATCCTGTGTGTGATCCATCC+AGG + tig0029172:26625-26644 Msa1440990:intron 50.0%
AACCTGGATGGATCACACAC+AGG - tig0029172:26630-26649 None:intergenic 50.0%
TGTGTGATCCATCCAGGTTC+AGG + tig0029172:26631-26650 Msa1440990:intron 50.0%
! CATGGCACCGAAGGAACCTA+GGG - tig0029172:21634-21653 None:intergenic 55.0%
! ACATGGCACCGAAGGAACCT+AGG - tig0029172:21635-21654 None:intergenic 55.0%
! CAAGGTGGTGGTAACTTGCG+AGG - tig0029172:21738-21757 None:intergenic 55.0%
AGTTACCACCACCTTGCCAG+TGG + tig0029172:21742-21761 Msa1440990:CDS 55.0%
! TGACGATAGTGCCACTGGCA+AGG - tig0029172:21756-21775 None:intergenic 55.0%
CATGAGAGTCGGGAGCAGAA+GGG - tig0029172:21869-21888 None:intergenic 55.0%
TCATGAGAGTCGGGAGCAGA+AGG - tig0029172:21870-21889 None:intergenic 55.0%
AGTACGGACACGGAACACGA+CGG + tig0029172:22208-22227 Msa1440990:intron 55.0%
TATGAAGCACGGACACGGCT+CGG - tig0029172:22326-22345 None:intergenic 55.0%
CGTGTCCGTGCTTCATAGGT+TGG + tig0029172:22329-22348 Msa1440990:intron 55.0%
AGCCCCGTGCATTCATGTCA+AGG + tig0029172:22678-22697 Msa1440990:CDS 55.0%
GTTCATCTGCGCTTCCCTGA+CGG + tig0029172:23444-23463 Msa1440990:CDS 55.0%
! CAGTCGCATCGATCCCTTAC+CGG + tig0029172:24623-24642 Msa1440990:CDS 55.0%
! AGTCGCATCGATCCCTTACC+GGG + tig0029172:24624-24643 Msa1440990:CDS 55.0%
CATCCATCCCTTGCCCCATA+CGG + tig0029172:24745-24764 Msa1440990:intron 55.0%
AAACCGTATGGGGCAAGGGA+TGG - tig0029172:24751-24770 None:intergenic 55.0%
GACATCCTTGATTGCTGCGC+GGG + tig0029172:24979-24998 Msa1440990:intron 55.0%
CTAATCCCGCGCAGCAATCA+AGG - tig0029172:24987-25006 None:intergenic 55.0%
! GATTGCTGCGCGGGATTAGT+AGG + tig0029172:24988-25007 Msa1440990:intron 55.0%
! CATGGCACCGAAGGAACCTA+GGG - tig0029172:21634-21653 None:intergenic 55.0%
! ACATGGCACCGAAGGAACCT+AGG - tig0029172:21635-21654 None:intergenic 55.0%
! CAAGGTGGTGGTAACTTGCG+AGG - tig0029172:21738-21757 None:intergenic 55.0%
AGTTACCACCACCTTGCCAG+TGG + tig0029172:21742-21761 Msa1440990:CDS 55.0%
! TGACGATAGTGCCACTGGCA+AGG - tig0029172:21756-21775 None:intergenic 55.0%
CATGAGAGTCGGGAGCAGAA+GGG - tig0029172:21869-21888 None:intergenic 55.0%
TCATGAGAGTCGGGAGCAGA+AGG - tig0029172:21870-21889 None:intergenic 55.0%
AGTACGGACACGGAACACGA+CGG + tig0029172:22208-22227 Msa1440990:intron 55.0%
TATGAAGCACGGACACGGCT+CGG - tig0029172:22326-22345 None:intergenic 55.0%
CGTGTCCGTGCTTCATAGGT+TGG + tig0029172:22329-22348 Msa1440990:intron 55.0%
AGCCCCGTGCATTCATGTCA+AGG + tig0029172:22678-22697 Msa1440990:CDS 55.0%
GTTCATCTGCGCTTCCCTGA+CGG + tig0029172:23444-23463 Msa1440990:CDS 55.0%
! CAGTCGCATCGATCCCTTAC+CGG + tig0029172:24623-24642 Msa1440990:CDS 55.0%
! AGTCGCATCGATCCCTTACC+GGG + tig0029172:24624-24643 Msa1440990:CDS 55.0%
CATCCATCCCTTGCCCCATA+CGG + tig0029172:24745-24764 Msa1440990:intron 55.0%
AAACCGTATGGGGCAAGGGA+TGG - tig0029172:24751-24770 None:intergenic 55.0%
GACATCCTTGATTGCTGCGC+GGG + tig0029172:24979-24998 Msa1440990:intron 55.0%
CTAATCCCGCGCAGCAATCA+AGG - tig0029172:24987-25006 None:intergenic 55.0%
! GATTGCTGCGCGGGATTAGT+AGG + tig0029172:24988-25007 Msa1440990:intron 55.0%
! GAGGAAGGACATGGCACCGA+AGG - tig0029172:21643-21662 None:intergenic 60.0%
! TAGTGCCACTGGCAAGGTGG+TGG - tig0029172:21750-21769 None:intergenic 60.0%
! CGATAGTGCCACTGGCAAGG+TGG - tig0029172:21753-21772 None:intergenic 60.0%
TCATAGGTGCCAACCCCCGT+TGG - tig0029172:22188-22207 None:intergenic 60.0%
GAGCCGTGTCCGTGCTTCAT+AGG + tig0029172:22325-22344 Msa1440990:intron 60.0%
! ATGCTGGAGGCCTGCTGGTT+CGG + tig0029172:22616-22635 Msa1440990:CDS 60.0%
AATGCACGGGGCTCAGCTGT+GGG - tig0029172:22671-22690 None:intergenic 60.0%
! GTCGCATCGATCCCTTACCG+GGG + tig0029172:24625-24644 Msa1440990:CDS 60.0%
!! TTGGTCCATGGGAGGTGCCT+GGG - tig0029172:26353-26372 None:intergenic 60.0%
!! TTTGGTCCATGGGAGGTGCC+TGG - tig0029172:26354-26373 None:intergenic 60.0%
AGGCACCTCCCATGGACCAA+AGG + tig0029172:26353-26372 Msa1440990:intron 60.0%
CCTGTCTTCCAGCTCGAGCA+AGG - tig0029172:26387-26406 None:intergenic 60.0%
CCTTGCTCGAGCTGGAAGAC+AGG + tig0029172:26384-26403 Msa1440990:CDS 60.0%
! GAGGAAGGACATGGCACCGA+AGG - tig0029172:21643-21662 None:intergenic 60.0%
! TAGTGCCACTGGCAAGGTGG+TGG - tig0029172:21750-21769 None:intergenic 60.0%
! CGATAGTGCCACTGGCAAGG+TGG - tig0029172:21753-21772 None:intergenic 60.0%
TCATAGGTGCCAACCCCCGT+TGG - tig0029172:22188-22207 None:intergenic 60.0%
GAGCCGTGTCCGTGCTTCAT+AGG + tig0029172:22325-22344 Msa1440990:intron 60.0%
! ATGCTGGAGGCCTGCTGGTT+CGG + tig0029172:22616-22635 Msa1440990:CDS 60.0%
AATGCACGGGGCTCAGCTGT+GGG - tig0029172:22671-22690 None:intergenic 60.0%
! GTCGCATCGATCCCTTACCG+GGG + tig0029172:24625-24644 Msa1440990:CDS 60.0%
!! TTGGTCCATGGGAGGTGCCT+GGG - tig0029172:26353-26372 None:intergenic 60.0%
!! TTTGGTCCATGGGAGGTGCC+TGG - tig0029172:26354-26373 None:intergenic 60.0%
AGGCACCTCCCATGGACCAA+AGG + tig0029172:26353-26372 Msa1440990:intron 60.0%
CCTGTCTTCCAGCTCGAGCA+AGG - tig0029172:26387-26406 None:intergenic 60.0%
CCTTGCTCGAGCTGGAAGAC+AGG + tig0029172:26384-26403 Msa1440990:CDS 60.0%
! GCACGGACACGGCTCGGATT+AGG - tig0029172:22320-22339 None:intergenic 65.0%
ACGGGGCTCAGCTGTGGGAA+CGG - tig0029172:22666-22685 None:intergenic 65.0%
GAATGCACGGGGCTCAGCTG+TGG - tig0029172:22672-22691 None:intergenic 65.0%
CATCGATCCCTTACCGGGGC+TGG + tig0029172:24629-24648 Msa1440990:CDS 65.0%
GTCATCCCAGGCACCTCCCA+TGG + tig0029172:26345-26364 Msa1440990:intron 65.0%
! GCACGGACACGGCTCGGATT+AGG - tig0029172:22320-22339 None:intergenic 65.0%
ACGGGGCTCAGCTGTGGGAA+CGG - tig0029172:22666-22685 None:intergenic 65.0%
GAATGCACGGGGCTCAGCTG+TGG - tig0029172:22672-22691 None:intergenic 65.0%
CATCGATCCCTTACCGGGGC+TGG + tig0029172:24629-24648 Msa1440990:CDS 65.0%
GTCATCCCAGGCACCTCCCA+TGG + tig0029172:26345-26364 Msa1440990:intron 65.0%
CGGGGCTCAGCTGTGGGAAC+GGG - tig0029172:22665-22684 None:intergenic 70.0%
CGGGGCTCAGCTGTGGGAAC+GGG - tig0029172:22665-22684 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0029172 gene 21461 26984 21461 ID=Msa1440990;Name=Msa1440990
tig0029172 mRNA 21461 26984 21461 ID=Msa1440990-mRNA-1;Parent=Msa1440990;Name=Msa1440990-mRNA-1;_AED=0.02;_eAED=0.02;_QI=151|1|1|1|1|1|10|254|399
tig0029172 exon 21461 21908 21461 ID=Msa1440990-mRNA-1:exon:12559;Parent=Msa1440990-mRNA-1
tig0029172 exon 22540 22699 22540 ID=Msa1440990-mRNA-1:exon:12560;Parent=Msa1440990-mRNA-1
tig0029172 exon 22881 22942 22881 ID=Msa1440990-mRNA-1:exon:12561;Parent=Msa1440990-mRNA-1
tig0029172 exon 23306 23465 23306 ID=Msa1440990-mRNA-1:exon:12562;Parent=Msa1440990-mRNA-1
tig0029172 exon 23554 23674 23554 ID=Msa1440990-mRNA-1:exon:12563;Parent=Msa1440990-mRNA-1
tig0029172 exon 24101 24182 24101 ID=Msa1440990-mRNA-1:exon:12564;Parent=Msa1440990-mRNA-1
tig0029172 exon 24582 24685 24582 ID=Msa1440990-mRNA-1:exon:12565;Parent=Msa1440990-mRNA-1
tig0029172 exon 26199 26277 26199 ID=Msa1440990-mRNA-1:exon:12566;Parent=Msa1440990-mRNA-1
tig0029172 exon 26355 26405 26355 ID=Msa1440990-mRNA-1:exon:12567;Parent=Msa1440990-mRNA-1
tig0029172 exon 26647 26984 26647 ID=Msa1440990-mRNA-1:exon:12568;Parent=Msa1440990-mRNA-1
tig0029172 five_prime_UTR 21461 21611 21461 ID=Msa1440990-mRNA-1:five_prime_utr;Parent=Msa1440990-mRNA-1
tig0029172 CDS 21612 21908 21612 ID=Msa1440990-mRNA-1:cds;Parent=Msa1440990-mRNA-1
tig0029172 CDS 22540 22699 22540 ID=Msa1440990-mRNA-1:cds;Parent=Msa1440990-mRNA-1
tig0029172 CDS 22881 22942 22881 ID=Msa1440990-mRNA-1:cds;Parent=Msa1440990-mRNA-1
tig0029172 CDS 23306 23465 23306 ID=Msa1440990-mRNA-1:cds;Parent=Msa1440990-mRNA-1
tig0029172 CDS 23554 23674 23554 ID=Msa1440990-mRNA-1:cds;Parent=Msa1440990-mRNA-1
tig0029172 CDS 24101 24182 24101 ID=Msa1440990-mRNA-1:cds;Parent=Msa1440990-mRNA-1
tig0029172 CDS 24582 24685 24582 ID=Msa1440990-mRNA-1:cds;Parent=Msa1440990-mRNA-1
tig0029172 CDS 26199 26277 26199 ID=Msa1440990-mRNA-1:cds;Parent=Msa1440990-mRNA-1
tig0029172 CDS 26355 26405 26355 ID=Msa1440990-mRNA-1:cds;Parent=Msa1440990-mRNA-1
tig0029172 CDS 26647 26730 26647 ID=Msa1440990-mRNA-1:cds;Parent=Msa1440990-mRNA-1
tig0029172 three_prime_UTR 26731 26984 26731 ID=Msa1440990-mRNA-1:three_prime_utr;Parent=Msa1440990-mRNA-1
Gene Sequence

>Msa1440990

ATGGCTATCTTCTCTGCAACCCTAGGTTCCTTCGGTGCCATGTCCTTCCTCTCATCTTCACAATCACAACAACACGACCCTTCTTCTTCCTCAATCGTCAATCCTTTCAATTTCCCTAAATGCCCTCGCAAGTTACCACCACCTTGCCAGTGGCACTATCGTCATCATCACAATTCTAAAATCATGGTATCTAGTAGTAGTAGTAGTAGTAACAATACTCATATTGATGAATTCGACAGTGGTCTTCTTCAACGCCCTTCTGCTCCCGACTCTCATGATGCTCTTCGTCAAGCCAGGAGATCGTCAGATTGGAAGGCTGCAAACGCATATAGAGACAGTGGACTCATTTACAATGGTAGGGTTGAGGGTTTTAATGCTGGAGGCCTGCTGGTTCGGTTTTACTCTATCATGGGCTTTCTCCCGTTCCCACAGCTGAGCCCCGTGCATTCATGTCAAGAACCAGATAAAACTATCCAAGAACTTGCAAGAGAGTTGATCGGTTCCATCTTATCAGTGAAGGTAATTATAGTAGACGAGGAGAAACGGAAATTGGTCTTATCTGAAAAGGAAGCTTCATGGTTTAAATATTCAAAACATATCAACATAGGGGACCTTTTTGAAGCAAGAGTCGGTTCTGTTGAGGACTATGGTGCTTTTGTTCATCTGCGCTTCCCTGACGGTCTTTATCACCTTACCGGACTAATACATATCTCAGAAGTGTCGTGGGATCTAGTTCAAGATGTAAGAGACTTCTTAAGAGAAGGTGAAGAAGTGAGGGTCAAAGTTATCAGTATTGATACTGTAAAAATGAGGCTTACACTGTCAATTAAACAGCTAGAAGAAGATCCACTGCTAGAAACTCTGGACAAAGTAATACCTCAGGATGGTTCAGCTGTTCCCGATTCTTTCAGCAGTACTACTAGCAGTCGCATCGATCCCTTACCGGGGCTGGATACAATACTTGAAGAGCTATTGCAGGAAGATGGCATATACGATGCAAGAATCAGTCGTCAGGGGTTTGAAAAACGAGTGGTCTCACAAGACTTGCAGCTTTGGCTTTCTAATGCACCTCCCATGGACCAAAGGTTTACTCTCCTTGCTCGAGCTGGAAGACAGGTTCAGGAGATACATCTGAAAACATCCCTTGACCAGGAAGGCATCAAAAAGGCAATACAACGAGTATTGGAGCGTGTTCCTTGA

Protein sequence

>Msa1440990

MAIFSATLGSFGAMSFLSSSQSQQHDPSSSSIVNPFNFPKCPRKLPPPCQWHYRHHHNSKIMVSSSSSSSNNTHIDEFDSGLLQRPSAPDSHDALRQARRSSDWKAANAYRDSGLIYNGRVEGFNAGGLLVRFYSIMGFLPFPQLSPVHSCQEPDKTIQELARELIGSILSVKVIIVDEEKRKLVLSEKEASWFKYSKHINIGDLFEARVGSVEDYGAFVHLRFPDGLYHLTGLIHISEVSWDLVQDVRDFLREGEEVRVKVISIDTVKMRLTLSIKQLEEDPLLETLDKVIPQDGSAVPDSFSSTTSSRIDPLPGLDTILEELLQEDGIYDARISRQGFEKRVVSQDLQLWLSNAPPMDQRFTLLARAGRQVQEIHLKTSLDQEGIKKAIQRVLERVP*