AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1331530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1331530 MtrunA17_Chr4g0056591 97.561 779 19 0 1 779 1 779 0.0 1565
Msa1331530 MtrunA17_Chr7g0231931 42.473 744 409 9 41 770 2 740 0.0 585
Msa1331530 MtrunA17_Chr2g0286711 42.525 689 365 10 89 770 52 716 7.03e-176 522
Msa1331530 MtrunA17_Chr4g0056581 74.603 126 31 1 456 581 2 126 7.15e-57 191
Msa1331530 MtrunA17_Chr4g0056571 69.014 142 38 1 632 773 1 136 4.94e-56 188
Msa1331530 MtrunA17_Chr2g0291831 34.872 390 205 13 69 439 56 415 1.67e-52 190
Msa1331530 MtrunA17_Chr2g0291331 32.376 383 211 12 93 444 29 394 1.13e-48 179
Msa1331530 MtrunA17_Chr2g0291811 33.333 333 203 8 148 474 86 405 4.36e-43 162
Msa1331530 MtrunA17_Chr2g0311941 24.941 842 435 26 79 763 5 806 2.02e-42 166
Msa1331530 MtrunA17_Chr3g0082331 27.869 366 238 9 145 487 102 464 2.40e-41 158
Msa1331530 MtrunA17_Chr2g0291321 30.065 306 164 5 93 348 78 383 4.11e-37 144
Msa1331530 MtrunA17_Chr2g0291381 30.928 291 170 4 88 348 4 293 1.02e-36 140
Msa1331530 MtrunA17_Chr4g0025761 29.467 319 194 8 145 438 100 412 2.79e-35 139
Msa1331530 MtrunA17_Chr2g0291361 28.797 316 166 4 88 348 4 315 5.52e-34 132
Msa1331530 MtrunA17_Chr2g0310991 33.333 165 105 2 207 366 3 167 3.80e-29 115
Msa1331530 MtrunA17_Chr6g0459191 29.839 248 155 6 207 438 3 247 8.68e-29 117
Msa1331530 MtrunA17_Chr8g0391041 27.532 316 184 10 207 488 3 307 1.59e-26 110
Msa1331530 MtrunA17_Chr1g0173551 37.799 209 119 5 24 224 7 212 2.26e-25 112
Msa1331530 MtrunA17_Chr4g0065151 22.042 803 475 24 93 763 140 923 4.41e-25 112
Msa1331530 MtrunA17_Chr2g0291391 27.703 296 160 7 93 336 35 328 3.81e-23 101
Msa1331530 MtrunA17_Chr4g0066951 39.098 133 81 0 90 222 12 144 7.79e-23 104
Msa1331530 MtrunA17_Chr4g0040791 35.326 184 112 3 38 221 4 180 2.24e-22 102
Msa1331530 MtrunA17_Chr2g0311931 25.904 498 290 17 353 777 332 823 3.07e-21 99.4
Msa1331530 MtrunA17_Chr2g0311931 37.500 160 81 3 79 221 5 162 1.27e-19 94.4
Msa1331530 MtrunA17_Chr1g0170011 25.800 469 270 16 353 750 332 793 2.00e-20 96.7
Msa1331530 MtrunA17_Chr1g0170011 37.500 160 81 3 79 221 5 162 1.35e-19 94.0
Msa1331530 MtrunA17_Chr8g0391571 33.000 200 121 6 294 487 9 201 2.21e-19 87.4
Msa1331530 MtrunA17_Chr2g0291351 30.688 189 125 5 158 343 4 189 5.81e-19 85.9
Msa1331530 MtrunA17_Chr2g0291421 30.726 179 94 4 70 225 34 205 1.40e-18 85.9
Msa1331530 MtrunA17_Chr3g0130991 33.889 180 98 4 63 224 40 216 2.25e-18 89.7
Msa1331530 MtrunA17_Chr7g0216911 28.837 215 125 6 35 225 2 212 2.39e-16 83.6
Msa1331530 MtrunA17_Chr2g0311061 32.727 110 70 1 207 312 3 112 2.59e-16 76.3
Msa1331530 MtrunA17_Chr2g0287231 31.387 137 82 4 91 220 12 143 1.52e-11 65.1
Msa1331530 MtrunA17_Chr2g0318291 29.697 165 94 5 90 232 7 171 1.85e-11 64.7
Msa1331530 MtrunA17_Chr7g0259481 26.168 214 128 6 11 220 3 190 2.47e-11 66.6
Msa1331530 MtrunA17_Chr2g0310931 28.972 107 73 2 207 312 3 107 9.71e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1331530 AT1G62750.1 85.732 785 104 4 1 779 1 783 0.0 1346
Msa1331530 AT2G45030.1 43.995 741 394 10 45 770 9 743 0.0 592
Msa1331530 AT1G45332.1 43.725 741 396 10 45 770 9 743 0.0 590
Msa1331530 AT1G45332.2 42.049 566 321 6 207 770 3 563 6.57e-149 448
Msa1331530 AT1G56070.3 25.275 819 435 28 79 750 5 793 4.21e-41 162
Msa1331530 AT1G56070.2 25.275 819 435 28 79 750 5 793 4.21e-41 162
Msa1331530 AT1G56070.1 25.275 819 435 28 79 750 5 793 4.21e-41 162
Msa1331530 AT3G12915.2 24.691 810 453 29 79 777 5 768 8.65e-34 139
Msa1331530 AT1G06220.1 22.893 795 469 26 93 760 139 916 7.59e-29 124
Msa1331530 AT1G06220.3 22.893 795 469 26 93 760 139 916 7.59e-29 124
Msa1331530 AT1G06220.2 22.893 795 469 26 93 760 139 916 7.59e-29 124
Msa1331530 AT5G25230.2 22.930 785 481 24 93 760 125 902 6.45e-28 121
Msa1331530 AT5G25230.1 22.930 785 481 24 93 760 125 902 6.45e-28 121
Msa1331530 AT2G31060.2 37.037 162 90 3 93 248 60 215 1.58e-23 106
Msa1331530 AT5G13650.1 36.842 190 103 5 43 224 32 212 1.58e-22 103
Msa1331530 AT5G13650.2 39.362 188 102 6 43 224 32 213 2.32e-22 103
Msa1331530 AT2G31060.3 36.145 166 90 4 93 248 60 219 1.05e-21 100
Msa1331530 AT3G22980.1 37.594 133 83 0 90 222 7 139 4.59e-21 99.4
Msa1331530 AT3G22980.3 37.594 133 83 0 90 222 7 139 4.59e-21 99.4
Msa1331530 AT3G22980.2 37.594 133 83 0 90 222 7 139 4.59e-21 99.4
Msa1331530 AT5G39900.1 34.014 147 85 2 88 225 62 205 7.67e-19 91.7
Msa1331530 AT5G08650.2 38.194 144 78 3 87 224 81 219 1.60e-17 87.4
Msa1331530 AT5G08650.1 38.194 144 78 3 87 224 81 219 1.71e-17 87.4
Msa1331530 AT4G20360.1 30.108 186 115 5 39 222 36 208 3.21e-11 67.0
Msa1331530 AT4G20360.2 30.108 186 115 5 39 222 36 208 3.21e-11 67.0

Find 231 sgRNAs with CRISPR-Local

Find 409 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCTGCAACCACCACTTTC+TGG 0.095469 8_4:+51078750 Msa1331530:CDS
GGCTTACTTCATTTAATTTC+TGG 0.112301 8_4:+51081686 Msa1331530:three_prime_UTR
ACTGAGAAATTTCTCCTTCT+TGG 0.130938 8_4:-51076600 None:intergenic
ATACCTCACTTCATGGATTT+TGG 0.131797 8_4:-51080458 None:intergenic
ATCCTCTCTATTGTTGCTTC+TGG 0.134545 8_4:-51079442 None:intergenic
TCGTCTCAAAAGAGAATTTA+AGG 0.150654 8_4:+51079948 Msa1331530:CDS
TTTCTTCCATGAATTGTTAT+TGG 0.190826 8_4:+51081514 Msa1331530:three_prime_UTR
GTCAATATCAGCTTTAGTTT+TGG 0.199047 8_4:-51079800 None:intergenic
ACAACTTCAACTTTCATTAT+AGG 0.203073 8_4:-51080805 None:intergenic
TCTTCTATCCCTTTGGTGTT+TGG 0.206307 8_4:-51076367 None:intergenic
TCTTTCTCCACTTCGTTTCA+TGG 0.207665 8_4:+51076476 Msa1331530:CDS
CTTCTATCCCTTTGGTGTTT+GGG 0.211468 8_4:-51076366 None:intergenic
TACAGATGTTTAAATAACTA+TGG 0.227541 8_4:-51081604 None:intergenic
AAGATCAATAACTCCCTTAA+AGG 0.228567 8_4:-51079068 None:intergenic
TGGTGCAGAAGATTCCTTTA+AGG 0.240766 8_4:+51079054 Msa1331530:CDS
TAGAAGTGGAGCGTGCTCTT+AGG 0.250672 8_4:+51078825 Msa1331530:CDS
AGACATGATAGTGACAAATT+TGG 0.252597 8_4:+51079000 Msa1331530:CDS
GTTACTCCTGAAGAACATTT+AGG 0.259112 8_4:+51080826 Msa1331530:CDS
GGGGATATTGTTGCTCTTGC+TGG 0.261376 8_4:+51079673 Msa1331530:CDS
GACGTTAAAGTAGCTTTAAC+AGG 0.262110 8_4:+51079652 Msa1331530:CDS
TACATTCCCGGGGTTGTTAA+AGG 0.275534 8_4:+51080607 Msa1331530:CDS
TAGGCTCCCTTACATTTGTT+AGG 0.276039 8_4:+51079524 Msa1331530:CDS
TCTTCGTTATCACAATTCTT+TGG 0.277896 8_4:+51076540 Msa1331530:CDS
TCCTCTCTATTGTTGCTTCT+GGG 0.288948 8_4:-51079441 None:intergenic
ACTGGAAGGAACTACAAAAT+TGG 0.295711 8_4:+51078656 Msa1331530:CDS
AAAAGCATTCAGAAGGAAAA+AGG 0.297493 8_4:+51081482 Msa1331530:three_prime_UTR
CATCTGGTTCAACTCCTTCT+AGG 0.298517 8_4:-51079246 None:intergenic
ATTTGTCCAATAACAATTCA+TGG 0.299262 8_4:-51081520 None:intergenic
TGTGCACATACCTCACTTCA+TGG 0.304729 8_4:-51080465 None:intergenic
ACCCCGGGAATGTATTCTTT+TGG 0.311643 8_4:-51080598 None:intergenic
TTCTTCTCCACCCCAAACTA+TGG 0.314805 8_4:-51079104 None:intergenic
ACATCTCCTAAATGTTCTTC+AGG 0.320044 8_4:-51080832 None:intergenic
TGTCACCAAAACTATTGATT+TGG 0.327285 8_4:-51080882 None:intergenic
CAATTCAAACAAAGGGAAAA+AGG 0.328267 8_4:+51079585 Msa1331530:CDS
GAACATTTAGGAGATGTAAT+TGG 0.332221 8_4:+51080838 Msa1331530:CDS
TTAAAAGCTAGTCCAGAAAA+TGG 0.332936 8_4:-51079481 None:intergenic
TGCTGCAACCACCACTTTCT+GGG 0.336485 8_4:+51078751 Msa1331530:CDS
TGCTTGTTTGACAGTGTTGC+TGG 0.345092 8_4:+51078866 Msa1331530:CDS
ATCATGAGTGATTCATTTGT+AGG 0.353963 8_4:+51079505 Msa1331530:CDS
AGAGGCCAAATCAATAGTTT+TGG 0.355381 8_4:+51080877 Msa1331530:CDS
TTAGGATGAAAGCCATAGTT+TGG 0.363837 8_4:+51079092 Msa1331530:CDS
GCAATCTTAATCACAGGATC+AGG 0.363993 8_4:-51079769 None:intergenic
TGCTTTCCCTGTAGTTTACT+TGG 0.369644 8_4:-51080432 None:intergenic
AGGGAGTTATTGATCTTGTT+AGG 0.371142 8_4:+51079074 Msa1331530:CDS
AAGAGCACGCTCCACTTCTA+AGG 0.371177 8_4:-51078822 None:intergenic
GGTGCAGAAGATTCCTTTAA+GGG 0.374622 8_4:+51079055 Msa1331530:CDS
AAGCTCCTCTTGCTGCCAAC+TGG 0.377137 8_4:-51080741 None:intergenic
AGAGCTTTCTTCTATCCCTT+TGG 0.379875 8_4:-51076374 None:intergenic
TCAGGGTCAGTACCCTTCAT+TGG 0.383227 8_4:-51079415 None:intergenic
CTCATCATCTAACTCAACTA+TGG 0.387664 8_4:-51079209 None:intergenic
GACATGATAGTGACAAATTT+GGG 0.389329 8_4:+51079001 Msa1331530:CDS
TCTCCTTCTTGGAGCAAGCT+GGG 0.389568 8_4:-51076589 None:intergenic
TTCTCCTTCTTGGAGCAAGC+TGG 0.390148 8_4:-51076590 None:intergenic
CTCCACACAGTTTCTGATTG+TGG 0.390511 8_4:-51078896 None:intergenic
TAGGATGAAAGCCATAGTTT+GGG 0.391473 8_4:+51079093 Msa1331530:CDS
GTGTATGAGCAATGGTGTTC+TGG 0.396149 8_4:+51080639 Msa1331530:CDS
GAACGGATTCTCTTCTATAC+TGG 0.396772 8_4:+51078638 Msa1331530:CDS
GAAAGGCACAGAGGAGAAAC+TGG 0.398567 8_4:-51076338 None:intergenic
TCACTATCATGTCTCTTGTT+CGG 0.400543 8_4:-51078991 None:intergenic
CTCAAGCACGACCGGACTCT+CGG 0.409409 8_4:-51079734 None:intergenic
AGAAGTGGAGCGTGCTCTTA+GGG 0.409951 8_4:+51078826 Msa1331530:CDS
GTTCCAAAAGAATACATTCC+CGG 0.421525 8_4:+51080595 Msa1331530:CDS
TCAAGCACGACCGGACTCTC+GGG 0.424335 8_4:-51079733 None:intergenic
TACTCTGGAAAGCTAACTGC+TGG 0.428886 8_4:+51079550 Msa1331530:CDS
GAAAGTAAGGCGTTTAAACT+TGG 0.429015 8_4:+51081569 Msa1331530:three_prime_UTR
GCAAAAGAACGGGATTGTAC+TGG 0.434589 8_4:-51076513 None:intergenic
CTTGTACTTCAACTACCAAT+TGG 0.434648 8_4:+51079034 Msa1331530:CDS
AGGTTCAAGCATTCTCGGTC+CGG 0.435323 8_4:-51080785 None:intergenic
AGGCTCCCTTACATTTGTTA+GGG 0.436453 8_4:+51079525 Msa1331530:CDS
AACCGTACGGTTCGAACCGA+TGG 0.439730 8_4:+51080525 Msa1331530:CDS
AAGGAATCTTCTGCACCAAT+TGG 0.440601 8_4:-51079049 None:intergenic
TTCTGCATAATGTATTTCCT+TGG 0.443296 8_4:+51081334 Msa1331530:exon
TACATCGACAACTGGAAATC+CGG 0.444027 8_4:-51080662 None:intergenic
CCACTTCGTTTCATGGCCAC+AGG 0.449471 8_4:+51076483 Msa1331530:CDS
TCAGACAGTGATTGAAGGAA+TGG 0.455007 8_4:+51079897 Msa1331530:CDS
GGAAGATAACCCTCATGGTT+AGG 0.456619 8_4:-51081360 None:intergenic
TCCCGGGGTTGTTAAAGGAT+TGG 0.460880 8_4:+51080612 Msa1331530:CDS
GCTTTCCCTGTAGTTTACTT+GGG 0.464760 8_4:-51080431 None:intergenic
AGTACACCCTAACAAATGTA+AGG 0.467383 8_4:-51079531 None:intergenic
TCCAATCCTTTAACAACCCC+GGG 0.467473 8_4:-51080613 None:intergenic
CTCCTTCTTGGAGCAAGCTG+GGG 0.469003 8_4:-51076588 None:intergenic
TGAGTTAGATGATGAGGCTA+TGG 0.470860 8_4:+51079216 Msa1331530:CDS
TTGGTGTTTGGGATAAAGAA+AGG 0.470916 8_4:-51076355 None:intergenic
GTGCTCCCCAAGTAAACTAC+AGG 0.472000 8_4:+51080425 Msa1331530:CDS
CGAAGAAGAAGCAAAAGAAC+GGG 0.472640 8_4:-51076523 None:intergenic
TCCGGTCGTGCTTGAGCGGA+TGG 0.474167 8_4:+51079741 Msa1331530:CDS
TGGCACAAAAGTGGCTGCTA+TGG 0.475886 8_4:-51079302 None:intergenic
ATTATAGGTTCAAGCATTCT+CGG 0.476541 8_4:-51080790 None:intergenic
GGTTTGAAAGATACTATAAC+AGG 0.478716 8_4:+51079694 Msa1331530:CDS
GTTGTGTGACCCCGAGAGTC+CGG 0.479820 8_4:+51079723 Msa1331530:CDS
ACTTGACGTACCACCAATGA+AGG 0.484967 8_4:+51079402 Msa1331530:CDS
GTCAATAAAATGGACCGCCT+TGG 0.486422 8_4:+51078956 Msa1331530:CDS
TTCCATCGGTTCGAACCGTA+CGG 0.491150 8_4:-51080527 None:intergenic
TGACTTACCTTGAGTCCACC+TGG 0.492845 8_4:-51080907 None:intergenic
TTCCAAAAGAATACATTCCC+GGG 0.493139 8_4:+51080596 Msa1331530:CDS
GTTTGACAGTGTTGCTGGTG+TGG 0.493303 8_4:+51078871 Msa1331530:CDS
TGGAGGCAAGCTGATAGATA+TGG 0.495619 8_4:+51078914 Msa1331530:CDS
ATGTTGCGATAATCTTTCAA+TGG 0.495740 8_4:-51078572 None:intergenic
TTCCAATCCTTTAACAACCC+CGG 0.496448 8_4:-51080614 None:intergenic
TTGAAATGATTCTGCAGCCA+TGG 0.497945 8_4:-51076400 None:intergenic
ACTGCACGTACATCGACAAC+TGG 0.499067 8_4:-51080670 None:intergenic
ATAAATCAGACAGTGATTGA+AGG 0.499594 8_4:+51079892 Msa1331530:CDS
TTATCGCAACATTGGTATCA+TGG 0.501102 8_4:+51078583 Msa1331530:CDS
GCTATGGAGAACTACCTAGA+AGG 0.504057 8_4:+51079232 Msa1331530:CDS
GGAGCGTGCTCTTAGGGTGC+TGG 0.504827 8_4:+51078832 Msa1331530:CDS
CAGACAGTGATTGAAGGAAT+GGG 0.506089 8_4:+51079898 Msa1331530:CDS
TTCTTTATCCCAAACACCAA+AGG 0.507391 8_4:+51076358 Msa1331530:five_prime_UTR
ATGTACTCAATTCAAACAAA+GGG 0.507638 8_4:+51079578 Msa1331530:CDS
AACATAATACAAGTATCAAA+AGG 0.508215 8_4:-51081381 None:intergenic
ATCTGCAGGTATATCTTCAT+AGG 0.508832 8_4:-51079143 None:intergenic
CTTTCCCTGTAGTTTACTTG+GGG 0.509764 8_4:-51080430 None:intergenic
TCCATCCGCTCAAGCACGAC+CGG 0.511314 8_4:-51079742 None:intergenic
CTGATTTATCTCTTCATCAC+GGG 0.514996 8_4:-51079878 None:intergenic
TAAAGCTGATATTGACAAGA+TGG 0.515624 8_4:+51079807 Msa1331530:CDS
TATTGACAAAACAAATTCGC+GGG 0.516620 8_4:-51078940 None:intergenic
GGGTCAGTACCCTTCATTGG+TGG 0.517101 8_4:-51079412 None:intergenic
CGAAGTGGAGAAAGAAGGGT+TGG 0.518379 8_4:-51076468 None:intergenic
TCACGGGAGAAGTGGAAAGA+AGG 0.518593 8_4:-51079862 None:intergenic
TGGAGCAAGCTGGGGTGAAG+TGG 0.520243 8_4:-51076580 None:intergenic
TCTTTATCCCAAACACCAAA+GGG 0.520787 8_4:+51076359 Msa1331530:five_prime_UTR
TATCCACTGCCTGGTTCCAT+CGG 0.521586 8_4:-51080541 None:intergenic
TCAATTGCAATCTTAATCAC+AGG 0.522182 8_4:-51079775 None:intergenic
GAACCGATGGAACCAGGCAG+TGG 0.524162 8_4:+51080538 Msa1331530:CDS
GATATTGACAAGATGGCAGC+TGG 0.524749 8_4:+51079814 Msa1331530:CDS
ACCTGCAGATCTCCTAGAGC+AGG 0.524880 8_4:+51079156 Msa1331530:CDS
CTACGGCATCTAACAATGGT+TGG 0.526975 8_4:-51079360 None:intergenic
GCCTGCTCTAGGAGATCTGC+AGG 0.530064 8_4:-51079157 None:intergenic
TATATCTTCATAGGTAAACT+TGG 0.533663 8_4:-51079134 None:intergenic
CGGGAAGGAATAAGAAAAGC+CGG 0.534718 8_4:+51080766 Msa1331530:CDS
CAAAAGAACGGGATTGTACT+GGG 0.536374 8_4:-51076512 None:intergenic
ATCAACATCATTGATACTCC+TGG 0.537310 8_4:+51078785 Msa1331530:CDS
TTGAATTCATATCCACTGCC+TGG 0.537323 8_4:-51080550 None:intergenic
CAGTATGTCAGTACACTAAG+AGG 0.538521 8_4:+51081212 Msa1331530:CDS
TGTAATCTTGAGCCTGCTCT+AGG 0.539505 8_4:-51079168 None:intergenic
GGATATATGAGCTAAAATGT+TGG 0.540316 8_4:+51076271 None:intergenic
CGTGCTCTTAGGGTGCTGGA+TGG 0.540699 8_4:+51078836 Msa1331530:CDS
ACAGATGTTTAAATAACTAT+GGG 0.541232 8_4:-51081603 None:intergenic
TTGAAAGATTATCGCAACAT+TGG 0.541603 8_4:+51078575 Msa1331530:CDS
CACCCCAGCTTGCTCCAAGA+AGG 0.542043 8_4:+51076586 Msa1331530:CDS
TGTTGACTTCACCTTAGAAG+TGG 0.543999 8_4:+51078811 Msa1331530:CDS
CGGTTCGAACCGATGGAACC+AGG 0.546258 8_4:+51080532 Msa1331530:CDS
GTTTGGGGTGGAGAAGAACT+TGG 0.546516 8_4:+51079109 Msa1331530:CDS
TGGAGAGGTGCATGAGGGAA+CGG 0.546902 8_4:+51078676 Msa1331530:CDS
TCTCTTCATCACGGGAGAAG+TGG 0.550210 8_4:-51079870 None:intergenic
TCTTCACTCTGTAATCTCAA+TGG 0.551066 8_4:+51076432 Msa1331530:CDS
CGATGTACGTGCAGTACTTG+TGG 0.554163 8_4:+51080678 Msa1331530:CDS
TGAAACGAAGTGGAGAAAGA+AGG 0.555195 8_4:-51076473 None:intergenic
TGGTTTAGTCAAGCTTGCAC+AGG 0.555326 8_4:+51079834 Msa1331530:CDS
ATGCAGGTTGAAGCTAATGT+TGG 0.556625 8_4:+51080403 Msa1331530:intron
ACATTTGTTAGGGTGTACTC+TGG 0.556805 8_4:+51079535 Msa1331530:CDS
TATGTACTCAATTCAAACAA+AGG 0.558763 8_4:+51079577 Msa1331530:CDS
ATGTTCATTCTGAATGATGT+TGG 0.560282 8_4:+51081665 Msa1331530:three_prime_UTR
GCTTTCCAGTTGGCAGCAAG+AGG 0.561969 8_4:+51080736 Msa1331530:CDS
CCTTGGTATCCTAACCATGA+GGG 0.564508 8_4:+51081351 Msa1331530:three_prime_UTR
CATACCCTCTGGAGTGGACA+TGG 0.564625 8_4:-51076628 None:intergenic
ACACTAAGAGGGATGACAAA+GGG 0.569387 8_4:+51081224 Msa1331530:CDS
AGGGAACGGCAACAATGGAC+TGG 0.569874 8_4:+51078690 Msa1331530:CDS
GGTGGTTGCAGCAGAAGTAA+TGG 0.572161 8_4:-51078741 None:intergenic
AACGGCAACAATGGACTGGA+TGG 0.572185 8_4:+51078694 Msa1331530:CDS
GCATGAGGGAACGGCAACAA+TGG 0.573114 8_4:+51078685 Msa1331530:CDS
CATAGTTGAGTTAGATGATG+AGG 0.574570 8_4:+51079210 Msa1331530:CDS
ATGAGCAATGGTGTTCTGGC+CGG 0.574875 8_4:+51080643 Msa1331530:CDS
AAGTGTGTTGGCTTTCCAGT+TGG 0.575702 8_4:+51080726 Msa1331530:CDS
TACTGAAACATCTCAGCAAG+AGG 0.576993 8_4:-51081194 None:intergenic
CAAAAGGAAGATAACCCTCA+TGG 0.578735 8_4:-51081365 None:intergenic
AGAGTCCGGTCGTGCTTGAG+CGG 0.579358 8_4:+51079737 Msa1331530:CDS
TTCATTGGTGGTACGTCAAG+TGG 0.579646 8_4:-51079400 None:intergenic
CCACTTTCTGGGATAAGCAC+AGG 0.580580 8_4:+51078762 Msa1331530:CDS
CCCTCATGGTTAGGATACCA+AGG 0.580950 8_4:-51081351 None:intergenic
ACGAAGAAGAAGCAAAAGAA+CGG 0.581099 8_4:-51076524 None:intergenic
TGGAACAAGAACAAGAAAGA+GGG 0.586012 8_4:+51078714 Msa1331530:CDS
CAAAATTGGAGAGGTGCATG+AGG 0.587392 8_4:+51078670 Msa1331530:CDS
ATGGAACAAGAACAAGAAAG+AGG 0.587836 8_4:+51078713 Msa1331530:CDS
GAAACGAAGTGGAGAAAGAA+GGG 0.590389 8_4:-51076472 None:intergenic
TCTGATTTATCTCTTCATCA+CGG 0.591410 8_4:-51079879 None:intergenic
ATTGGTAGTTGAAGTACAAG+TGG 0.593192 8_4:-51079031 None:intergenic
GGTGGTACGTCAAGTGGTGA+TGG 0.596795 8_4:-51079394 None:intergenic
TTCGCCATGTCCACTCCAGA+GGG 0.597462 8_4:+51076624 Msa1331530:CDS
ACACAACACTGGCACAAAAG+TGG 0.597638 8_4:-51079311 None:intergenic
TTATTGACAAAACAAATTCG+CGG 0.599109 8_4:-51078941 None:intergenic
TTTCGCCATGTCCACTCCAG+AGG 0.599867 8_4:+51076623 Msa1331530:CDS
TTGAGGAACCACATCAAACA+TGG 0.602289 8_4:-51081273 None:intergenic
ATCATGGCTCACATAGACGC+TGG 0.605107 8_4:+51078599 Msa1331530:CDS
CACGGGAGAAGTGGAAAGAA+GGG 0.605278 8_4:-51079861 None:intergenic
CAATCTTAATCACAGGATCA+GGG 0.605440 8_4:-51079768 None:intergenic
TGATGTAGATTCAAGTGTGT+TGG 0.605570 8_4:+51080714 Msa1331530:CDS
GCAATTAGCCATGTTTGATG+TGG 0.606338 8_4:+51081265 Msa1331530:CDS
CATGGCTAATTGCATAGAGT+AGG 0.606540 8_4:-51081255 None:intergenic
GGCTGCAGAATCATTTCAAG+TGG 0.607115 8_4:+51076404 Msa1331530:CDS
GAAATACATACCCTCTGGAG+TGG 0.610416 8_4:-51076634 None:intergenic
TGACAAACCAGGTGGACTCA+AGG 0.612807 8_4:+51080900 Msa1331530:CDS
AAAGCTGATCCACACAACAC+TGG 0.616813 8_4:-51079322 None:intergenic
AAGGTGAAGTCAACATGACC+AGG 0.620892 8_4:-51078803 None:intergenic
GGTGATCTCAACTCAAGAAG+AGG 0.624392 8_4:+51080859 Msa1331530:CDS
TCCTTGGTATCCTAACCATG+AGG 0.624964 8_4:+51081350 Msa1331530:three_prime_UTR
CGTTAAAGTAGCTTTAACAG+GGG 0.625103 8_4:+51079654 Msa1331530:CDS
ACCATTGTTAGATGCCGTAG+TGG 0.627521 8_4:+51079363 Msa1331530:CDS
CAAGCACGACCGGACTCTCG+GGG 0.629713 8_4:-51079732 None:intergenic
ACACACTTGAATCTACATCA+TGG 0.630754 8_4:-51080711 None:intergenic
TTCAAGAGTGAAATCAAAGG+AGG 0.635596 8_4:+51080568 Msa1331530:CDS
ACCCAGAAGCAACAATAGAG+AGG 0.635662 8_4:+51079440 Msa1331530:CDS
ATGAAAGCCATAGTTTGGGG+TGG 0.637080 8_4:+51079097 Msa1331530:CDS
GGATTCTCTTCTATACTGGA+AGG 0.638126 8_4:+51078642 Msa1331530:CDS
TTGTACTGGGCGAAAACCTG+TGG 0.640635 8_4:-51076499 None:intergenic
AGTATGTCAGTACACTAAGA+GGG 0.642708 8_4:+51081213 Msa1331530:CDS
CCTGTGGCCATGAAACGAAG+TGG 0.645489 8_4:-51076483 None:intergenic
ACGTTAAAGTAGCTTTAACA+GGG 0.645786 8_4:+51079653 Msa1331530:CDS
TCCACTACGGCATCTAACAA+TGG 0.646726 8_4:-51079364 None:intergenic
AGTTGATTCTGAATGTGTTG+AGG 0.647718 8_4:-51081290 None:intergenic
CCTGTGCTTATCCCAGAAAG+TGG 0.649345 8_4:-51078762 None:intergenic
GAAAGACAACTACAACTGAA+CGG 0.652152 8_4:+51078621 Msa1331530:CDS
CACAATCAGAAACTGTGTGG+AGG 0.653249 8_4:+51078897 Msa1331530:CDS
GTACACCCTAACAAATGTAA+GGG 0.653327 8_4:-51079530 None:intergenic
TAGAAGAAAGCTCTAAACCA+TGG 0.653494 8_4:+51076383 Msa1331530:exon
ACTCTGGAAAGCTAACTGCT+GGG 0.660200 8_4:+51079551 Msa1331530:CDS
TTTCCAAAATCCATGAAGTG+AGG 0.662062 8_4:+51080455 Msa1331530:CDS
TACACTAAGAGGGATGACAA+AGG 0.664178 8_4:+51081223 Msa1331530:CDS
AAAATTGGAGAGGTGCATGA+GGG 0.664370 8_4:+51078671 Msa1331530:CDS
AGGATGAAAGCCATAGTTTG+GGG 0.664796 8_4:+51079094 Msa1331530:CDS
CTTGACGTACCACCAATGAA+GGG 0.671815 8_4:+51079403 Msa1331530:CDS
TCCAAAAGAATACATTCCCG+GGG 0.672083 8_4:+51080597 Msa1331530:CDS
GAATTCAAGAGTGAAATCAA+AGG 0.672516 8_4:+51080565 Msa1331530:CDS
GTGCTTATCCCAGAAAGTGG+TGG 0.672529 8_4:-51078759 None:intergenic
TTGGAAGAGTGTATGAGCAA+TGG 0.673468 8_4:+51080631 Msa1331530:CDS
TGCTCCCCAAGTAAACTACA+GGG 0.676266 8_4:+51080426 Msa1331530:CDS
AGTTTGCAGATATAACCGTA+CGG 0.678410 8_4:+51080512 Msa1331530:CDS
TGATGGTAGATAATCCACTA+CGG 0.689328 8_4:-51079377 None:intergenic
AGCCACAATCAGAAACTGTG+TGG 0.697529 8_4:+51078894 Msa1331530:CDS
GTACGTGCAGTACTTGTGGA+TGG 0.703027 8_4:+51080682 Msa1331530:CDS
AAGGAACTACAAAATTGGAG+AGG 0.709328 8_4:+51078661 Msa1331530:CDS
TGGGATAAAGAAAGGCACAG+AGG 0.753284 8_4:-51076347 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCAATAACAATTTTAAAAA+TGG - chr8_4:51081056-51081075 None:intergenic 10.0%
!!! TTGTTGTATATTTATTTTTT+TGG + chr8_4:51081544-51081563 Msa1331530:three_prime_UTR 10.0%
!!! TGTTGTATATTTATTTTTTT+GGG + chr8_4:51081545-51081564 Msa1331530:three_prime_UTR 10.0%
!! ATCTATTAATATAAATTCGT+TGG + chr8_4:51076724-51076743 Msa1331530:intron 15.0%
!! ATATAATTCAATGTGATTAT+AGG - chr8_4:51077042-51077061 None:intergenic 15.0%
!! TACATACTATAAATTTAGTT+TGG + chr8_4:51077218-51077237 Msa1331530:intron 15.0%
!!! TTAATTCACTAAGATTTTTT+TGG - chr8_4:51077884-51077903 None:intergenic 15.0%
!!! AATTTGTTTTGTCAATAAAA+TGG + chr8_4:51078946-51078965 Msa1331530:CDS 15.0%
!! CAACTATAAAAAAATTAATC+AGG + chr8_4:51079272-51079291 Msa1331530:CDS 15.0%
!! TATAAAAAAATTAATCAGGA+AGG + chr8_4:51079276-51079295 Msa1331530:CDS 15.0%
!! ATAAAAAAATTAATCAGGAA+GGG + chr8_4:51079277-51079296 Msa1331530:CDS 15.0%
!! TTAAGGTTATAATCATTATT+TGG + chr8_4:51079965-51079984 Msa1331530:intron 15.0%
!! AAGAAACTTATCATATAAAA+GGG - chr8_4:51080256-51080275 None:intergenic 15.0%
!!! TTTTATATGATAAGTTTCTT+GGG + chr8_4:51080256-51080275 Msa1331530:intron 15.0%
!! TCAAATTTAATAAATGAACA+TGG - chr8_4:51080947-51080966 None:intergenic 15.0%
!! TGTTCATTTATTAAATTTGA+AGG + chr8_4:51080947-51080966 Msa1331530:intron 15.0%
!!! TTTCCTATAGTTTTATTTTT+TGG + chr8_4:51081407-51081426 Msa1331530:three_prime_UTR 15.0%
!!! TTCCTATAGTTTTATTTTTT+GGG + chr8_4:51081408-51081427 Msa1331530:three_prime_UTR 15.0%
!!! AACGTGTAATTTTGAATAAA+GGG - chr8_4:51076773-51076792 None:intergenic 20.0%
!!! AAACGTGTAATTTTGAATAA+AGG - chr8_4:51076774-51076793 None:intergenic 20.0%
!!! TATTCAAAATTACACGTTTT+TGG + chr8_4:51076775-51076794 Msa1331530:intron 20.0%
!! GAATTATATGATGTTATTAG+CGG + chr8_4:51077053-51077072 Msa1331530:intron 20.0%
!! ACGTTCTAATAAAAAGAAAA+CGG + chr8_4:51077299-51077318 Msa1331530:intron 20.0%
!! CAAACAAAGAAAGTTAAAAA+GGG - chr8_4:51078532-51078551 None:intergenic 20.0%
!! ACAAACAAAGAAAGTTAAAA+AGG - chr8_4:51078533-51078552 None:intergenic 20.0%
!! TCAAATCCTGATAAAAAATA+AGG + chr8_4:51080107-51080126 Msa1331530:intron 20.0%
!! CAAGAAACTTATCATATAAA+AGG - chr8_4:51080257-51080276 None:intergenic 20.0%
!!! CTTTTATATGATAAGTTTCT+TGG + chr8_4:51080255-51080274 Msa1331530:intron 20.0%
!! AACATAATACAAGTATCAAA+AGG - chr8_4:51081384-51081403 None:intergenic 20.0%
!!! TCCTATAGTTTTATTTTTTG+GGG + chr8_4:51081409-51081428 Msa1331530:three_prime_UTR 20.0%
!!! ATTTTTCATGTACTAATACA+AGG + chr8_4:51081448-51081467 Msa1331530:three_prime_UTR 20.0%
!! ACAGATGTTTAAATAACTAT+GGG - chr8_4:51081606-51081625 None:intergenic 20.0%
!! TACAGATGTTTAAATAACTA+TGG - chr8_4:51081607-51081626 None:intergenic 20.0%
! CATTCAATAAAAGAGAATGA+TGG + chr8_4:51077406-51077425 Msa1331530:intron 25.0%
!!! ATAGACTGTGTTATTGATTT+TGG - chr8_4:51077817-51077836 None:intergenic 25.0%
! AATAACACAGTCTATTTACA+AGG + chr8_4:51077822-51077841 Msa1331530:intron 25.0%
!! ACAGATTTTCACAAAATATG+TGG - chr8_4:51077987-51078006 None:intergenic 25.0%
!! TTTTGTGAAAATCTGTTTGT+TGG + chr8_4:51077991-51078010 Msa1331530:intron 25.0%
!!! AAATTAATGCTGTTCTGAAA+TGG - chr8_4:51078103-51078122 None:intergenic 25.0%
! TGTGAATGATGTTAAACTTA+TGG + chr8_4:51078241-51078260 Msa1331530:intron 25.0%
! TGTTAAACTTATGGTTATCA+AGG + chr8_4:51078250-51078269 Msa1331530:intron 25.0%
! GTTAAACTTATGGTTATCAA+GGG + chr8_4:51078251-51078270 Msa1331530:intron 25.0%
!!! TCCTTTTGAAAATGATTATG+AGG + chr8_4:51078313-51078332 Msa1331530:intron 25.0%
!! ACCTCATAATCATTTTCAAA+AGG - chr8_4:51078317-51078336 None:intergenic 25.0%
!! TATCTATTTAAGACCAAAGA+AGG - chr8_4:51078400-51078419 None:intergenic 25.0%
!! TTAACTTTCTTTGTTTGTAG+AGG + chr8_4:51078535-51078554 Msa1331530:intron 25.0%
! TTATTGACAAAACAAATTCG+CGG - chr8_4:51078944-51078963 None:intergenic 25.0%
! TATATCTTCATAGGTAAACT+TGG - chr8_4:51079137-51079156 None:intergenic 25.0%
!!! TTTTTTATAGTTGCTTCATC+TGG - chr8_4:51079265-51079284 None:intergenic 25.0%
! TATGTACTCAATTCAAACAA+AGG + chr8_4:51079577-51079596 Msa1331530:CDS 25.0%
! ATGTACTCAATTCAAACAAA+GGG + chr8_4:51079578-51079597 Msa1331530:CDS 25.0%
!!! TCAATATCAGCTTTAGTTTT+GGG - chr8_4:51079802-51079821 None:intergenic 25.0%
! ATATAAAAGGGAAAGGAAAA+TGG - chr8_4:51080244-51080263 None:intergenic 25.0%
! ACTTATCATATAAAAGGGAA+AGG - chr8_4:51080251-51080270 None:intergenic 25.0%
! ACAACTTCAACTTTCATTAT+AGG - chr8_4:51080808-51080827 None:intergenic 25.0%
! TAATAAATGAACATGGAGAA+CGG - chr8_4:51080940-51080959 None:intergenic 25.0%
! TTGAATGTAACTACAAGTAT+TGG - chr8_4:51081027-51081046 None:intergenic 25.0%
!! ATGTTCAGTTCTAATTAGTA+CGG - chr8_4:51081130-51081149 None:intergenic 25.0%
!!! CCTATAGTTTTATTTTTTGG+GGG + chr8_4:51081410-51081429 Msa1331530:three_prime_UTR 25.0%
!!! CTATAGTTTTATTTTTTGGG+GGG + chr8_4:51081411-51081430 Msa1331530:three_prime_UTR 25.0%
! TTTCTTCCATGAATTGTTAT+TGG + chr8_4:51081514-51081533 Msa1331530:three_prime_UTR 25.0%
! ATTTGTCCAATAACAATTCA+TGG - chr8_4:51081523-51081542 None:intergenic 25.0%
!!! TATTTTTTTGGGAGAAAGTA+AGG + chr8_4:51081556-51081575 Msa1331530:three_prime_UTR 25.0%
TCTTCGTTATCACAATTCTT+TGG + chr8_4:51076540-51076559 Msa1331530:CDS 30.0%
AGATAATATACAAACGAACC+AGG - chr8_4:51076801-51076820 None:intergenic 30.0%
AATAACAGTCTGAACTTGTA+TGG + chr8_4:51076912-51076931 Msa1331530:intron 30.0%
TTGTATGGCTGCTAAAAAAA+AGG + chr8_4:51076927-51076946 Msa1331530:intron 30.0%
TTCAATGTGATTATAGGTGT+CGG - chr8_4:51077036-51077055 None:intergenic 30.0%
TGTACCTTTATGCCAAAATA+CGG + chr8_4:51077267-51077286 Msa1331530:intron 30.0%
AAAACACAGACAAGAAATGT+AGG + chr8_4:51077359-51077378 Msa1331530:intron 30.0%
!! GTTAAACTCTGAAACTGTTT+AGG - chr8_4:51077644-51077663 None:intergenic 30.0%
GTAAAAGGAAAATGAAGAGA+TGG + chr8_4:51077702-51077721 Msa1331530:intron 30.0%
TTTCTTCCATTTGTCATTGA+GGG - chr8_4:51077767-51077786 None:intergenic 30.0%
ATTTCTTCCATTTGTCATTG+AGG - chr8_4:51077768-51077787 None:intergenic 30.0%
!!! TTGATTTTGGAATTGCTTGT+AGG - chr8_4:51077804-51077823 None:intergenic 30.0%
TATATAGATGGTGCACATAT+TGG - chr8_4:51078034-51078053 None:intergenic 30.0%
ATACTAAACTTGACTCACAA+TGG + chr8_4:51078214-51078233 Msa1331530:intron 30.0%
GTCAAAGTTCATTGAAACAT+AGG + chr8_4:51078427-51078446 Msa1331530:intron 30.0%
ATGTTGCGATAATCTTTCAA+TGG - chr8_4:51078575-51078594 None:intergenic 30.0%
TTGAAAGATTATCGCAACAT+TGG + chr8_4:51078575-51078594 Msa1331530:CDS 30.0%
TATTGACAAAACAAATTCGC+GGG - chr8_4:51078943-51078962 None:intergenic 30.0%
! AGACATGATAGTGACAAATT+TGG + chr8_4:51079000-51079019 Msa1331530:CDS 30.0%
! GACATGATAGTGACAAATTT+GGG + chr8_4:51079001-51079020 Msa1331530:CDS 30.0%
AAGATCAATAACTCCCTTAA+AGG - chr8_4:51079071-51079090 None:intergenic 30.0%
TTAAAAGCTAGTCCAGAAAA+TGG - chr8_4:51079484-51079503 None:intergenic 30.0%
ATCATGAGTGATTCATTTGT+AGG + chr8_4:51079505-51079524 Msa1331530:CDS 30.0%
CAATTCAAACAAAGGGAAAA+AGG + chr8_4:51079585-51079604 Msa1331530:CDS 30.0%
!! ACGTTAAAGTAGCTTTAACA+GGG + chr8_4:51079653-51079672 Msa1331530:CDS 30.0%
GGTTTGAAAGATACTATAAC+AGG + chr8_4:51079694-51079713 Msa1331530:CDS 30.0%
TCAATTGCAATCTTAATCAC+AGG - chr8_4:51079778-51079797 None:intergenic 30.0%
!! GTCAATATCAGCTTTAGTTT+TGG - chr8_4:51079803-51079822 None:intergenic 30.0%
TAAAGCTGATATTGACAAGA+TGG + chr8_4:51079807-51079826 Msa1331530:CDS 30.0%
TCTGATTTATCTCTTCATCA+CGG - chr8_4:51079882-51079901 None:intergenic 30.0%
ATAAATCAGACAGTGATTGA+AGG + chr8_4:51079892-51079911 Msa1331530:CDS 30.0%
TCGTCTCAAAAGAGAATTTA+AGG + chr8_4:51079948-51079967 Msa1331530:CDS 30.0%
!!! CCTTCTCCTTATTTTTTATC+AGG - chr8_4:51080116-51080135 None:intergenic 30.0%
CCTGATAAAAAATAAGGAGA+AGG + chr8_4:51080113-51080132 Msa1331530:intron 30.0%
ATAAGGAGAAGGAATGAATT+AGG + chr8_4:51080124-51080143 Msa1331530:intron 30.0%
GATAGACATGGATTTAATCA+AGG - chr8_4:51080186-51080205 None:intergenic 30.0%
! TTTTTGCATAAAACTGCTGA+AGG - chr8_4:51080306-51080325 None:intergenic 30.0%
TATCTAACACTTGTTTATGC+AGG + chr8_4:51080387-51080406 Msa1331530:intron 30.0%
TATGTGCACAAAAAACAATC+AGG + chr8_4:51080478-51080497 Msa1331530:CDS 30.0%
GAATTCAAGAGTGAAATCAA+AGG + chr8_4:51080565-51080584 Msa1331530:CDS 30.0%
ATTATAGGTTCAAGCATTCT+CGG - chr8_4:51080793-51080812 None:intergenic 30.0%
GAACATTTAGGAGATGTAAT+TGG + chr8_4:51080838-51080857 Msa1331530:CDS 30.0%
! TGTCACCAAAACTATTGATT+TGG - chr8_4:51080885-51080904 None:intergenic 30.0%
AATAAATGAACATGGAGAAC+GGG - chr8_4:51080939-51080958 None:intergenic 30.0%
CTTCATATTAATGACGTATC+TGG + chr8_4:51080998-51081017 Msa1331530:intron 30.0%
! GAACATTGTTTTCTTCCTTT+TGG + chr8_4:51081144-51081163 Msa1331530:intron 30.0%
TTCTGCATAATGTATTTCCT+TGG + chr8_4:51081334-51081353 Msa1331530:exon 30.0%
CCCCCAAAAAATAAAACTAT+AGG - chr8_4:51081413-51081432 None:intergenic 30.0%
!!! CCTTCTGAATGCTTTTTTTT+TGG - chr8_4:51081478-51081497 None:intergenic 30.0%
!! CCAAAAAAAAAGCATTCAGA+AGG + chr8_4:51081475-51081494 Msa1331530:three_prime_UTR 30.0%
!! AAAAGCATTCAGAAGGAAAA+AGG + chr8_4:51081482-51081501 Msa1331530:three_prime_UTR 30.0%
! ATCTGTAGTTTTTGTCAACA+TGG + chr8_4:51081620-51081639 Msa1331530:three_prime_UTR 30.0%
ATGTTCATTCTGAATGATGT+TGG + chr8_4:51081665-51081684 Msa1331530:three_prime_UTR 30.0%
! GGCTTACTTCATTTAATTTC+TGG + chr8_4:51081686-51081705 Msa1331530:three_prime_UTR 30.0%
! TTGGTGTTTGGGATAAAGAA+AGG - chr8_4:51076358-51076377 None:intergenic 35.0%
TTCTTTATCCCAAACACCAA+AGG + chr8_4:51076358-51076377 Msa1331530:five_prime_UTR 35.0%
TCTTTATCCCAAACACCAAA+GGG + chr8_4:51076359-51076378 Msa1331530:five_prime_UTR 35.0%
!! TAGAAGAAAGCTCTAAACCA+TGG + chr8_4:51076383-51076402 Msa1331530:exon 35.0%
TCTTCACTCTGTAATCTCAA+TGG + chr8_4:51076432-51076451 Msa1331530:CDS 35.0%
ACGAAGAAGAAGCAAAAGAA+CGG - chr8_4:51076527-51076546 None:intergenic 35.0%
ACTGAGAAATTTCTCCTTCT+TGG - chr8_4:51076603-51076622 None:intergenic 35.0%
TGAAAGAAATACATACCCTC+TGG - chr8_4:51076642-51076661 None:intergenic 35.0%
!!! AAAATTACACGTTTTTGGCC+TGG + chr8_4:51076780-51076799 Msa1331530:intron 35.0%
TATGAACCATTGACACATAC+CGG + chr8_4:51076820-51076839 Msa1331530:intron 35.0%
ACACATGTAAACAACGTATC+CGG - chr8_4:51076842-51076861 None:intergenic 35.0%
GATACGTTGTTTACATGTGT+CGG + chr8_4:51076842-51076861 Msa1331530:intron 35.0%
GCATAGATACATGTGAAAGA+AGG - chr8_4:51076880-51076899 None:intergenic 35.0%
CTAGACTTAGACAGAGATAA+CGG + chr8_4:51077159-51077178 Msa1331530:intron 35.0%
! TTTGGCATAAAGGTACAAGA+AGG - chr8_4:51077264-51077283 None:intergenic 35.0%
AGAAAACGGTTTGTCAAATG+AGG + chr8_4:51077313-51077332 Msa1331530:intron 35.0%
TTGTCAAATGAGGATTTCAC+AGG + chr8_4:51077323-51077342 Msa1331530:intron 35.0%
TGTCAAATGAGGATTTCACA+GGG + chr8_4:51077324-51077343 Msa1331530:intron 35.0%
ACAGACAAGAAATGTAGGTT+AGG + chr8_4:51077364-51077383 Msa1331530:intron 35.0%
AATGAAACACAGTGACCAAA+GGG + chr8_4:51077561-51077580 Msa1331530:intron 35.0%
!! GTGTTCATTTTTCCCAATGA+TGG - chr8_4:51077591-51077610 None:intergenic 35.0%
! CCTGTTTTGTCATTCATGAA+TGG - chr8_4:51077666-51077685 None:intergenic 35.0%
CCATTCATGAATGACAAAAC+AGG + chr8_4:51077663-51077682 Msa1331530:intron 35.0%
! TATGACACAAGCATCGTAAA+AGG + chr8_4:51077687-51077706 Msa1331530:intron 35.0%
TTGTTGGATTCATTCACAAC+GGG - chr8_4:51077739-51077758 None:intergenic 35.0%
GTTGTTGGATTCATTCACAA+CGG - chr8_4:51077740-51077759 None:intergenic 35.0%
TTGCTTGTAGGACAAACAAT+CGG - chr8_4:51077792-51077811 None:intergenic 35.0%
TAACCTCAACAGTAGATTCT+TGG - chr8_4:51078194-51078213 None:intergenic 35.0%
TGAAAGCAAAACTACTTGAC+AGG - chr8_4:51078293-51078312 None:intergenic 35.0%
ATTTCTGTCTCTTCCTTCTT+TGG + chr8_4:51078384-51078403 Msa1331530:intron 35.0%
TTATCGCAACATTGGTATCA+TGG + chr8_4:51078583-51078602 Msa1331530:CDS 35.0%
GAAAGACAACTACAACTGAA+CGG + chr8_4:51078621-51078640 Msa1331530:CDS 35.0%
ACTGGAAGGAACTACAAAAT+TGG + chr8_4:51078656-51078675 Msa1331530:CDS 35.0%
AAGGAACTACAAAATTGGAG+AGG + chr8_4:51078661-51078680 Msa1331530:CDS 35.0%
ATGGAACAAGAACAAGAAAG+AGG + chr8_4:51078713-51078732 Msa1331530:CDS 35.0%
TGGAACAAGAACAAGAAAGA+GGG + chr8_4:51078714-51078733 Msa1331530:CDS 35.0%
ATCAACATCATTGATACTCC+TGG + chr8_4:51078785-51078804 Msa1331530:CDS 35.0%
TCACTATCATGTCTCTTGTT+CGG - chr8_4:51078994-51079013 None:intergenic 35.0%
! ATTGGTAGTTGAAGTACAAG+TGG - chr8_4:51079034-51079053 None:intergenic 35.0%
CTTGTACTTCAACTACCAAT+TGG + chr8_4:51079034-51079053 Msa1331530:CDS 35.0%
AGGGAGTTATTGATCTTGTT+AGG + chr8_4:51079074-51079093 Msa1331530:CDS 35.0%
TTAGGATGAAAGCCATAGTT+TGG + chr8_4:51079092-51079111 Msa1331530:CDS 35.0%
TAGGATGAAAGCCATAGTTT+GGG + chr8_4:51079093-51079112 Msa1331530:CDS 35.0%
ATCTGCAGGTATATCTTCAT+AGG - chr8_4:51079146-51079165 None:intergenic 35.0%
CTCATCATCTAACTCAACTA+TGG - chr8_4:51079212-51079231 None:intergenic 35.0%
CATAGTTGAGTTAGATGATG+AGG + chr8_4:51079210-51079229 Msa1331530:CDS 35.0%
TGGATCAGCTTTCAAAAACA+AGG + chr8_4:51079333-51079352 Msa1331530:CDS 35.0%
GGATCAGCTTTCAAAAACAA+GGG + chr8_4:51079334-51079353 Msa1331530:CDS 35.0%
TGATGGTAGATAATCCACTA+CGG - chr8_4:51079380-51079399 None:intergenic 35.0%
!! AGTGATGATGAACCATTTTC+TGG + chr8_4:51079469-51079488 Msa1331530:CDS 35.0%
GTACACCCTAACAAATGTAA+GGG - chr8_4:51079533-51079552 None:intergenic 35.0%
AGTACACCCTAACAAATGTA+AGG - chr8_4:51079534-51079553 None:intergenic 35.0%
AAAGGGAAAAAGGAGAGAAT+TGG + chr8_4:51079595-51079614 Msa1331530:CDS 35.0%
!! GACGTTAAAGTAGCTTTAAC+AGG + chr8_4:51079652-51079671 Msa1331530:CDS 35.0%
!! CGTTAAAGTAGCTTTAACAG+GGG + chr8_4:51079654-51079673 Msa1331530:CDS 35.0%
CAATCTTAATCACAGGATCA+GGG - chr8_4:51079771-51079790 None:intergenic 35.0%
CTGATTTATCTCTTCATCAC+GGG - chr8_4:51079881-51079900 None:intergenic 35.0%
TTTCCAAAATCCATGAAGTG+AGG + chr8_4:51080455-51080474 Msa1331530:CDS 35.0%
! ATACCTCACTTCATGGATTT+TGG - chr8_4:51080461-51080480 None:intergenic 35.0%
AAAAAACAATCAGGTGGACA+AGG + chr8_4:51080487-51080506 Msa1331530:CDS 35.0%
AGTTTGCAGATATAACCGTA+CGG + chr8_4:51080512-51080531 Msa1331530:CDS 35.0%
TTCAAGAGTGAAATCAAAGG+AGG + chr8_4:51080568-51080587 Msa1331530:CDS 35.0%
GTTCCAAAAGAATACATTCC+CGG + chr8_4:51080595-51080614 Msa1331530:CDS 35.0%
TTCCAAAAGAATACATTCCC+GGG + chr8_4:51080596-51080615 Msa1331530:CDS 35.0%
ACACACTTGAATCTACATCA+TGG - chr8_4:51080714-51080733 None:intergenic 35.0%
TGATGTAGATTCAAGTGTGT+TGG + chr8_4:51080714-51080733 Msa1331530:CDS 35.0%
GTTACTCCTGAAGAACATTT+AGG + chr8_4:51080826-51080845 Msa1331530:CDS 35.0%
ACATCTCCTAAATGTTCTTC+AGG - chr8_4:51080835-51080854 None:intergenic 35.0%
! AGAGGCCAAATCAATAGTTT+TGG + chr8_4:51080877-51080896 Msa1331530:CDS 35.0%
!!! AATAGTTTTGGTGACAAACC+AGG + chr8_4:51080889-51080908 Msa1331530:CDS 35.0%
ATAAATGAACATGGAGAACG+GGG - chr8_4:51080938-51080957 None:intergenic 35.0%
! TTCTTCCTTTTGGTGAAAAC+AGG + chr8_4:51081154-51081173 Msa1331530:intron 35.0%
AGTATGTCAGTACACTAAGA+GGG + chr8_4:51081213-51081232 Msa1331530:CDS 35.0%
! AGTTGATTCTGAATGTGTTG+AGG - chr8_4:51081293-51081312 None:intergenic 35.0%
! AGAAACTTCTTGCACTTTTG+TGG - chr8_4:51081318-51081337 None:intergenic 35.0%
! GAAAGTAAGGCGTTTAAACT+TGG + chr8_4:51081569-51081588 Msa1331530:three_prime_UTR 35.0%
!!! AGAAACTGGCCTCTAGTTTT+CGG - chr8_4:51076327-51076346 None:intergenic 40.0%
!! CTTCTATCCCTTTGGTGTTT+GGG - chr8_4:51076369-51076388 None:intergenic 40.0%
!! TCTTCTATCCCTTTGGTGTT+TGG - chr8_4:51076370-51076389 None:intergenic 40.0%
AGAGCTTTCTTCTATCCCTT+TGG - chr8_4:51076377-51076396 None:intergenic 40.0%
TTGAAATGATTCTGCAGCCA+TGG - chr8_4:51076403-51076422 None:intergenic 40.0%
!!! GAGAAAGAAGGGTTGGTTTT+CGG - chr8_4:51076464-51076483 None:intergenic 40.0%
GAAACGAAGTGGAGAAAGAA+GGG - chr8_4:51076475-51076494 None:intergenic 40.0%
TGAAACGAAGTGGAGAAAGA+AGG - chr8_4:51076476-51076495 None:intergenic 40.0%
TCTTTCTCCACTTCGTTTCA+TGG + chr8_4:51076476-51076495 Msa1331530:CDS 40.0%
CAAAAGAACGGGATTGTACT+GGG - chr8_4:51076515-51076534 None:intergenic 40.0%
CGAAGAAGAAGCAAAAGAAC+GGG - chr8_4:51076526-51076545 None:intergenic 40.0%
AGGTTTGAACCTATGAAGCA+TGG + chr8_4:51076947-51076966 Msa1331530:intron 40.0%
!! AAGAAGTGTCCATGCTTCAT+AGG - chr8_4:51076959-51076978 None:intergenic 40.0%
TATGAAGCATGGACACTTCT+TGG + chr8_4:51076958-51076977 Msa1331530:intron 40.0%
GTTCAAAGTCCTATGAAGCA+CGG - chr8_4:51077126-51077145 None:intergenic 40.0%
GCTTCATAGGACTTTGAACT+TGG + chr8_4:51077127-51077146 Msa1331530:intron 40.0%
!!! AGCTCCGTATTTTGGCATAA+AGG - chr8_4:51077274-51077293 None:intergenic 40.0%
AATACTTCGTTCCGTATACC+TGG + chr8_4:51077459-51077478 Msa1331530:intron 40.0%
GGCTATGTAATCGAGCATTT+GGG - chr8_4:51077498-51077517 None:intergenic 40.0%
TGGCTATGTAATCGAGCATT+TGG - chr8_4:51077499-51077518 None:intergenic 40.0%
CAATGAAACACAGTGACCAA+AGG + chr8_4:51077560-51077579 Msa1331530:intron 40.0%
ATGAAACACAGTGACCAAAG+GGG + chr8_4:51077562-51077581 Msa1331530:intron 40.0%
TGCACATATTGGTGAAAAGC+GGG - chr8_4:51078023-51078042 None:intergenic 40.0%
GTGCACATATTGGTGAAAAG+CGG - chr8_4:51078024-51078043 None:intergenic 40.0%
TTGTGTATGACCTTACGTCA+TGG + chr8_4:51078158-51078177 Msa1331530:intron 40.0%
ACAATTGAAGCCATGACGTA+AGG - chr8_4:51078171-51078190 None:intergenic 40.0%
TGTCCAAGAATCTACTGTTG+AGG + chr8_4:51078188-51078207 Msa1331530:intron 40.0%
! GAACGGATTCTCTTCTATAC+TGG + chr8_4:51078638-51078657 Msa1331530:CDS 40.0%
GGATTCTCTTCTATACTGGA+AGG + chr8_4:51078642-51078661 Msa1331530:CDS 40.0%
! AAAATTGGAGAGGTGCATGA+GGG + chr8_4:51078671-51078690 Msa1331530:CDS 40.0%
!! TGTTGACTTCACCTTAGAAG+TGG + chr8_4:51078811-51078830 Msa1331530:CDS 40.0%
AAGGAATCTTCTGCACCAAT+TGG - chr8_4:51079052-51079071 None:intergenic 40.0%
TGGTGCAGAAGATTCCTTTA+AGG + chr8_4:51079054-51079073 Msa1331530:CDS 40.0%
GGTGCAGAAGATTCCTTTAA+GGG + chr8_4:51079055-51079074 Msa1331530:CDS 40.0%
AGGATGAAAGCCATAGTTTG+GGG + chr8_4:51079094-51079113 Msa1331530:CDS 40.0%
TGAGTTAGATGATGAGGCTA+TGG + chr8_4:51079216-51079235 Msa1331530:CDS 40.0%
!! TTGTTGCTTCTGGGTTTTCA+GGG - chr8_4:51079435-51079454 None:intergenic 40.0%
!! ATTGTTGCTTCTGGGTTTTC+AGG - chr8_4:51079436-51079455 None:intergenic 40.0%
! TCCTCTCTATTGTTGCTTCT+GGG - chr8_4:51079444-51079463 None:intergenic 40.0%
! ATCCTCTCTATTGTTGCTTC+TGG - chr8_4:51079445-51079464 None:intergenic 40.0%
TAGGCTCCCTTACATTTGTT+AGG + chr8_4:51079524-51079543 Msa1331530:CDS 40.0%
! AGGCTCCCTTACATTTGTTA+GGG + chr8_4:51079525-51079544 Msa1331530:CDS 40.0%
! ACATTTGTTAGGGTGTACTC+TGG + chr8_4:51079535-51079554 Msa1331530:CDS 40.0%
GCAATCTTAATCACAGGATC+AGG - chr8_4:51079772-51079791 None:intergenic 40.0%
TCAGACAGTGATTGAAGGAA+TGG + chr8_4:51079897-51079916 Msa1331530:CDS 40.0%
CAGACAGTGATTGAAGGAAT+GGG + chr8_4:51079898-51079917 Msa1331530:CDS 40.0%
TTCATGCACAGCATCAACAT+TGG - chr8_4:51080076-51080095 None:intergenic 40.0%
CTGAAGGAAGGAAAGAAAAG+AGG - chr8_4:51080290-51080309 None:intergenic 40.0%
TGCATAAAACTGCTGAAGGA+AGG - chr8_4:51080302-51080321 None:intergenic 40.0%
! ATGCAGGTTGAAGCTAATGT+TGG + chr8_4:51080403-51080422 Msa1331530:intron 40.0%
CTTTCCCTGTAGTTTACTTG+GGG - chr8_4:51080433-51080452 None:intergenic 40.0%
GCTTTCCCTGTAGTTTACTT+GGG - chr8_4:51080434-51080453 None:intergenic 40.0%
TGCTTTCCCTGTAGTTTACT+TGG - chr8_4:51080435-51080454 None:intergenic 40.0%
GTGCACAAAAAACAATCAGG+TGG + chr8_4:51080481-51080500 Msa1331530:CDS 40.0%
TTGAATTCATATCCACTGCC+TGG - chr8_4:51080553-51080572 None:intergenic 40.0%
TCCAAAAGAATACATTCCCG+GGG + chr8_4:51080597-51080616 Msa1331530:CDS 40.0%
TTCCAATCCTTTAACAACCC+CGG - chr8_4:51080617-51080636 None:intergenic 40.0%
! TTGGAAGAGTGTATGAGCAA+TGG + chr8_4:51080631-51080650 Msa1331530:CDS 40.0%
TACATCGACAACTGGAAATC+CGG - chr8_4:51080665-51080684 None:intergenic 40.0%
! TTCCTTTTGGTGAAAACAGG+TGG + chr8_4:51081157-51081176 Msa1331530:intron 40.0%
! AACCACCTGTTTTCACCAAA+AGG - chr8_4:51081162-51081181 None:intergenic 40.0%
TACTGAAACATCTCAGCAAG+AGG - chr8_4:51081197-51081216 None:intergenic 40.0%
CAGTATGTCAGTACACTAAG+AGG + chr8_4:51081212-51081231 Msa1331530:CDS 40.0%
TACACTAAGAGGGATGACAA+AGG + chr8_4:51081223-51081242 Msa1331530:CDS 40.0%
ACACTAAGAGGGATGACAAA+GGG + chr8_4:51081224-51081243 Msa1331530:CDS 40.0%
CATGGCTAATTGCATAGAGT+AGG - chr8_4:51081258-51081277 None:intergenic 40.0%
GCAATTAGCCATGTTTGATG+TGG + chr8_4:51081265-51081284 Msa1331530:CDS 40.0%
TTGAGGAACCACATCAAACA+TGG - chr8_4:51081276-51081295 None:intergenic 40.0%
CAAAAGGAAGATAACCCTCA+TGG - chr8_4:51081368-51081387 None:intergenic 40.0%
GTCTCCTTACCGAAAACTAG+AGG + chr8_4:51076315-51076334 Msa1331530:five_prime_UTR 45.0%
! TGGGATAAAGAAAGGCACAG+AGG - chr8_4:51076350-51076369 None:intergenic 45.0%
GGCTGCAGAATCATTTCAAG+TGG + chr8_4:51076404-51076423 Msa1331530:CDS 45.0%
GCAAAAGAACGGGATTGTAC+TGG - chr8_4:51076516-51076535 None:intergenic 45.0%
! GAAATACATACCCTCTGGAG+TGG - chr8_4:51076637-51076656 None:intergenic 45.0%
ACGTATCCGGTATGTGTCAA+TGG - chr8_4:51076829-51076848 None:intergenic 45.0%
GCATGGACACTTCTTGGATT+AGG + chr8_4:51076964-51076983 Msa1331530:intron 45.0%
! TTCTTGGATTAGGCGTGTTC+CGG + chr8_4:51076974-51076993 Msa1331530:intron 45.0%
!! TATAGGTGTCGGTATCGTGT+CGG - chr8_4:51077025-51077044 None:intergenic 45.0%
AGTCCTATGAAGCACGGATA+CGG - chr8_4:51077120-51077139 None:intergenic 45.0%
AGGATTTCACAGGGTATAGC+TGG + chr8_4:51077333-51077352 Msa1331530:intron 45.0%
!! AGGAGCATCTTCCAGGTATA+CGG - chr8_4:51077473-51077492 None:intergenic 45.0%
TGTAATCGAGCATTTGGGAG+AGG - chr8_4:51077493-51077512 None:intergenic 45.0%
TCCTCAGCTCTCTTCAGTAA+TGG + chr8_4:51077534-51077553 Msa1331530:intron 45.0%
TCCATTACTGAAGAGAGCTG+AGG - chr8_4:51077538-51077557 None:intergenic 45.0%
AGGTTCGTTGAGCATTTGAG+AGG - chr8_4:51077624-51077643 None:intergenic 45.0%
GCACATATTGGTGAAAAGCG+GGG - chr8_4:51078022-51078041 None:intergenic 45.0%
! CAAAATTGGAGAGGTGCATG+AGG + chr8_4:51078670-51078689 Msa1331530:CDS 45.0%
AAGGTGAAGTCAACATGACC+AGG - chr8_4:51078806-51078825 None:intergenic 45.0%
TGCTTGTTTGACAGTGTTGC+TGG + chr8_4:51078866-51078885 Msa1331530:CDS 45.0%
AGCCACAATCAGAAACTGTG+TGG + chr8_4:51078894-51078913 Msa1331530:CDS 45.0%
CTCCACACAGTTTCTGATTG+TGG - chr8_4:51078899-51078918 None:intergenic 45.0%
CACAATCAGAAACTGTGTGG+AGG + chr8_4:51078897-51078916 Msa1331530:CDS 45.0%
TGGAGGCAAGCTGATAGATA+TGG + chr8_4:51078914-51078933 Msa1331530:CDS 45.0%
GTCAATAAAATGGACCGCCT+TGG + chr8_4:51078956-51078975 Msa1331530:CDS 45.0%
TTCGGAAAAAGTTCGCACCA+AGG - chr8_4:51078976-51078995 None:intergenic 45.0%
ATGAAAGCCATAGTTTGGGG+TGG + chr8_4:51079097-51079116 Msa1331530:CDS 45.0%
TTCTTCTCCACCCCAAACTA+TGG - chr8_4:51079107-51079126 None:intergenic 45.0%
TGTAATCTTGAGCCTGCTCT+AGG - chr8_4:51079171-51079190 None:intergenic 45.0%
GCTATGGAGAACTACCTAGA+AGG + chr8_4:51079232-51079251 Msa1331530:CDS 45.0%
! CATCTGGTTCAACTCCTTCT+AGG - chr8_4:51079249-51079268 None:intergenic 45.0%
ACACAACACTGGCACAAAAG+TGG - chr8_4:51079314-51079333 None:intergenic 45.0%
! ACTTTTGTGCCAGTGTTGTG+TGG + chr8_4:51079313-51079332 Msa1331530:CDS 45.0%
AAAGCTGATCCACACAACAC+TGG - chr8_4:51079325-51079344 None:intergenic 45.0%
CTACGGCATCTAACAATGGT+TGG - chr8_4:51079363-51079382 None:intergenic 45.0%
ACCATTGTTAGATGCCGTAG+TGG + chr8_4:51079363-51079382 Msa1331530:CDS 45.0%
TCCACTACGGCATCTAACAA+TGG - chr8_4:51079367-51079386 None:intergenic 45.0%
! TTCATTGGTGGTACGTCAAG+TGG - chr8_4:51079403-51079422 None:intergenic 45.0%
ACTTGACGTACCACCAATGA+AGG + chr8_4:51079402-51079421 Msa1331530:CDS 45.0%
CTTGACGTACCACCAATGAA+GGG + chr8_4:51079403-51079422 Msa1331530:CDS 45.0%
ACCCAGAAGCAACAATAGAG+AGG + chr8_4:51079440-51079459 Msa1331530:CDS 45.0%
! TACTCTGGAAAGCTAACTGC+TGG + chr8_4:51079550-51079569 Msa1331530:CDS 45.0%
! ACTCTGGAAAGCTAACTGCT+GGG + chr8_4:51079551-51079570 Msa1331530:CDS 45.0%
GATATTGACAAGATGGCAGC+TGG + chr8_4:51079814-51079833 Msa1331530:CDS 45.0%
TGGTTTAGTCAAGCTTGCAC+AGG + chr8_4:51079834-51079853 Msa1331530:CDS 45.0%
GCTTGATCGCATGATAGACA+TGG - chr8_4:51080198-51080217 None:intergenic 45.0%
TGCTCCCCAAGTAAACTACA+GGG + chr8_4:51080426-51080445 Msa1331530:CDS 45.0%
TGTGCACATACCTCACTTCA+TGG - chr8_4:51080468-51080487 None:intergenic 45.0%
! ACCCCGGGAATGTATTCTTT+TGG - chr8_4:51080601-51080620 None:intergenic 45.0%
TACATTCCCGGGGTTGTTAA+AGG + chr8_4:51080607-51080626 Msa1331530:CDS 45.0%
TCCAATCCTTTAACAACCCC+GGG - chr8_4:51080616-51080635 None:intergenic 45.0%
GTGTATGAGCAATGGTGTTC+TGG + chr8_4:51080639-51080658 Msa1331530:CDS 45.0%
!! AAGTGTGTTGGCTTTCCAGT+TGG + chr8_4:51080726-51080745 Msa1331530:CDS 45.0%
CGGGAAGGAATAAGAAAAGC+CGG + chr8_4:51080766-51080785 Msa1331530:CDS 45.0%
GGTGATCTCAACTCAAGAAG+AGG + chr8_4:51080859-51080878 Msa1331530:CDS 45.0%
!! AGTTTTGGTGACAAACCAGG+TGG + chr8_4:51080892-51080911 Msa1331530:CDS 45.0%
TCCTTGGTATCCTAACCATG+AGG + chr8_4:51081350-51081369 Msa1331530:three_prime_UTR 45.0%
CCTTGGTATCCTAACCATGA+GGG + chr8_4:51081351-51081370 Msa1331530:three_prime_UTR 45.0%
GGAAGATAACCCTCATGGTT+AGG - chr8_4:51081363-51081382 None:intergenic 45.0%
!! TATATATATATATATATAGA+TGG - chr8_4:51078046-51078065 None:intergenic 5.0%
!!! CTGGCCTCTAGTTTTCGGTA+AGG - chr8_4:51076322-51076341 None:intergenic 50.0%
! GAAAGGCACAGAGGAGAAAC+TGG - chr8_4:51076341-51076360 None:intergenic 50.0%
CGAAGTGGAGAAAGAAGGGT+TGG - chr8_4:51076471-51076490 None:intergenic 50.0%
TTGTACTGGGCGAAAACCTG+TGG - chr8_4:51076502-51076521 None:intergenic 50.0%
TCTCCTTCTTGGAGCAAGCT+GGG - chr8_4:51076592-51076611 None:intergenic 50.0%
TTCTCCTTCTTGGAGCAAGC+TGG - chr8_4:51076593-51076612 None:intergenic 50.0%
!! TATTAGCGGTGTCGACGTGT+CGG + chr8_4:51077067-51077086 Msa1331530:intron 50.0%
GTCCTATGAAGCACGGATAC+GGG - chr8_4:51077119-51077138 None:intergenic 50.0%
GATTACATAGCCAACTGCGC+TGG + chr8_4:51077506-51077525 Msa1331530:intron 50.0%
ACCAAAGGGGCTTCCATCAT+TGG + chr8_4:51077575-51077594 Msa1331530:intron 50.0%
CCAAAGGGGCTTCCATCATT+GGG + chr8_4:51077576-51077595 Msa1331530:intron 50.0%
ACGTCGCCCTCAATGACAAA+TGG + chr8_4:51077758-51077777 Msa1331530:intron 50.0%
ATCATGGCTCACATAGACGC+TGG + chr8_4:51078599-51078618 Msa1331530:CDS 50.0%
!! AACGGCAACAATGGACTGGA+TGG + chr8_4:51078694-51078713 Msa1331530:CDS 50.0%
GGTGGTTGCAGCAGAAGTAA+TGG - chr8_4:51078744-51078763 None:intergenic 50.0%
TGCTGCAACCACCACTTTCT+GGG + chr8_4:51078751-51078770 Msa1331530:CDS 50.0%
GTGCTTATCCCAGAAAGTGG+TGG - chr8_4:51078762-51078781 None:intergenic 50.0%
CCTGTGCTTATCCCAGAAAG+TGG - chr8_4:51078765-51078784 None:intergenic 50.0%
!! CCACTTTCTGGGATAAGCAC+AGG + chr8_4:51078762-51078781 Msa1331530:CDS 50.0%
! AAGAGCACGCTCCACTTCTA+AGG - chr8_4:51078825-51078844 None:intergenic 50.0%
TAGAAGTGGAGCGTGCTCTT+AGG + chr8_4:51078825-51078844 Msa1331530:CDS 50.0%
AGAAGTGGAGCGTGCTCTTA+GGG + chr8_4:51078826-51078845 Msa1331530:CDS 50.0%
! GTTTGACAGTGTTGCTGGTG+TGG + chr8_4:51078871-51078890 Msa1331530:CDS 50.0%
GGAAAAAGTTCGCACCAAGG+CGG - chr8_4:51078973-51078992 None:intergenic 50.0%
! GTTTGGGGTGGAGAAGAACT+TGG + chr8_4:51079109-51079128 Msa1331530:CDS 50.0%
TGGCACAAAAGTGGCTGCTA+TGG - chr8_4:51079305-51079324 None:intergenic 50.0%
TCAGGGTCAGTACCCTTCAT+TGG - chr8_4:51079418-51079437 None:intergenic 50.0%
GGGGATATTGTTGCTCTTGC+TGG + chr8_4:51079673-51079692 Msa1331530:CDS 50.0%
CACGGGAGAAGTGGAAAGAA+GGG - chr8_4:51079864-51079883 None:intergenic 50.0%
TCACGGGAGAAGTGGAAAGA+AGG - chr8_4:51079865-51079884 None:intergenic 50.0%
TCTCTTCATCACGGGAGAAG+TGG - chr8_4:51079873-51079892 None:intergenic 50.0%
GTGCTCCCCAAGTAAACTAC+AGG + chr8_4:51080425-51080444 Msa1331530:CDS 50.0%
!! TTCCATCGGTTCGAACCGTA+CGG - chr8_4:51080530-51080549 None:intergenic 50.0%
TATCCACTGCCTGGTTCCAT+CGG - chr8_4:51080544-51080563 None:intergenic 50.0%
TCCCGGGGTTGTTAAAGGAT+TGG + chr8_4:51080612-51080631 Msa1331530:CDS 50.0%
ATGAGCAATGGTGTTCTGGC+CGG + chr8_4:51080643-51080662 Msa1331530:CDS 50.0%
ACTGCACGTACATCGACAAC+TGG - chr8_4:51080673-51080692 None:intergenic 50.0%
CGATGTACGTGCAGTACTTG+TGG + chr8_4:51080678-51080697 Msa1331530:CDS 50.0%
GTACGTGCAGTACTTGTGGA+TGG + chr8_4:51080682-51080701 Msa1331530:CDS 50.0%
! TGGCAGCAAGAGGAGCTTTT+CGG + chr8_4:51080746-51080765 Msa1331530:CDS 50.0%
AGGTTCAAGCATTCTCGGTC+CGG - chr8_4:51080788-51080807 None:intergenic 50.0%
! TGACAAACCAGGTGGACTCA+AGG + chr8_4:51080900-51080919 Msa1331530:CDS 50.0%
TGACTTACCTTGAGTCCACC+TGG - chr8_4:51080910-51080929 None:intergenic 50.0%
CCCTCATGGTTAGGATACCA+AGG - chr8_4:51081354-51081373 None:intergenic 50.0%
CCTGTGGCCATGAAACGAAG+TGG - chr8_4:51076486-51076505 None:intergenic 55.0%
CCACTTCGTTTCATGGCCAC+AGG + chr8_4:51076483-51076502 Msa1331530:CDS 55.0%
CTCCTTCTTGGAGCAAGCTG+GGG - chr8_4:51076591-51076610 None:intergenic 55.0%
TTTCGCCATGTCCACTCCAG+AGG + chr8_4:51076623-51076642 Msa1331530:CDS 55.0%
TTCGCCATGTCCACTCCAGA+GGG + chr8_4:51076624-51076643 Msa1331530:CDS 55.0%
!! CATACCCTCTGGAGTGGACA+TGG - chr8_4:51076631-51076650 None:intergenic 55.0%
GATTAGGCGTGTTCCGGTGT+CGG + chr8_4:51076980-51076999 Msa1331530:intron 55.0%
! TGTCGGTATCGTGTCGGTGT+TGG - chr8_4:51077019-51077038 None:intergenic 55.0%
ATGAAGCACGGATACGGGCA+CGG - chr8_4:51077114-51077133 None:intergenic 55.0%
TGCCCGTATCCGTGCTTCAT+AGG + chr8_4:51077114-51077133 Msa1331530:intron 55.0%
! CGTGCTGCAGCTCCGTATTT+TGG - chr8_4:51077282-51077301 None:intergenic 55.0%
!! TTGGGAGAGGAGCATCTTCC+AGG - chr8_4:51077480-51077499 None:intergenic 55.0%
GAGGAAAGAACCAGCGCAGT+TGG - chr8_4:51077519-51077538 None:intergenic 55.0%
! CCCAATGATGGAAGCCCCTT+TGG - chr8_4:51077579-51077598 None:intergenic 55.0%
GTCATTGAGGGCGACGTTGT+TGG - chr8_4:51077755-51077774 None:intergenic 55.0%
! TGGAGAGGTGCATGAGGGAA+CGG + chr8_4:51078676-51078695 Msa1331530:CDS 55.0%
GCATGAGGGAACGGCAACAA+TGG + chr8_4:51078685-51078704 Msa1331530:CDS 55.0%
AGGGAACGGCAACAATGGAC+TGG + chr8_4:51078690-51078709 Msa1331530:CDS 55.0%
CTGCTGCAACCACCACTTTC+TGG + chr8_4:51078750-51078769 Msa1331530:CDS 55.0%
ACCTGCAGATCTCCTAGAGC+AGG + chr8_4:51079156-51079175 Msa1331530:CDS 55.0%
GGTGGTACGTCAAGTGGTGA+TGG - chr8_4:51079397-51079416 None:intergenic 55.0%
GGGTCAGTACCCTTCATTGG+TGG - chr8_4:51079415-51079434 None:intergenic 55.0%
AACCGTACGGTTCGAACCGA+TGG + chr8_4:51080525-51080544 Msa1331530:CDS 55.0%
GCTTTCCAGTTGGCAGCAAG+AGG + chr8_4:51080736-51080755 Msa1331530:CDS 55.0%
AAGCTCCTCTTGCTGCCAAC+TGG - chr8_4:51080744-51080763 None:intergenic 55.0%
! GGCAGCAAGAGGAGCTTTTC+GGG + chr8_4:51080747-51080766 Msa1331530:CDS 55.0%
!! GCAAGAGGAGCTTTTCGGGA+AGG + chr8_4:51080751-51080770 Msa1331530:CDS 55.0%
TGGAGCAAGCTGGGGTGAAG+TGG - chr8_4:51076583-51076602 None:intergenic 60.0%
! CACCCCAGCTTGCTCCAAGA+AGG + chr8_4:51076586-51076605 Msa1331530:CDS 60.0%
ACACGACACGTGTCCGACAC+CGG - chr8_4:51076996-51077015 None:intergenic 60.0%
!! CGTGCTCTTAGGGTGCTGGA+TGG + chr8_4:51078836-51078855 Msa1331530:CDS 60.0%
!! GCCTGCTCTAGGAGATCTGC+AGG - chr8_4:51079160-51079179 None:intergenic 60.0%
GTTGTGTGACCCCGAGAGTC+CGG + chr8_4:51079723-51079742 Msa1331530:CDS 60.0%
TCAAGCACGACCGGACTCTC+GGG - chr8_4:51079736-51079755 None:intergenic 60.0%
CTCAAGCACGACCGGACTCT+CGG - chr8_4:51079737-51079756 None:intergenic 60.0%
AGAGTCCGGTCGTGCTTGAG+CGG + chr8_4:51079737-51079756 Msa1331530:CDS 60.0%
TCCATCCGCTCAAGCACGAC+CGG - chr8_4:51079745-51079764 None:intergenic 60.0%
CGGTTCGAACCGATGGAACC+AGG + chr8_4:51080532-51080551 Msa1331530:CDS 60.0%
GAACCGATGGAACCAGGCAG+TGG + chr8_4:51080538-51080557 Msa1331530:CDS 60.0%
ACGGATACGGGCACGGACAC+TGG - chr8_4:51077107-51077126 None:intergenic 65.0%
GGAGCGTGCTCTTAGGGTGC+TGG + chr8_4:51078832-51078851 Msa1331530:CDS 65.0%
CAAGCACGACCGGACTCTCG+GGG - chr8_4:51079735-51079754 None:intergenic 65.0%
TCCGGTCGTGCTTGAGCGGA+TGG + chr8_4:51079741-51079760 Msa1331530:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 51076284 51081733 51076284 ID=Msa1331530;Name=Msa1331530
chr8_4 mRNA 51076284 51081733 51076284 ID=Msa1331530-mRNA-1;Parent=Msa1331530;Name=Msa1331530-mRNA-1;_AED=0.14;_eAED=0.14;_QI=118|1|1|1|1|1|4|390|779
chr8_4 exon 51076284 51076645 51076284 ID=Msa1331530-mRNA-1:exon:14999;Parent=Msa1331530-mRNA-1
chr8_4 exon 51078555 51079969 51078555 ID=Msa1331530-mRNA-1:exon:15000;Parent=Msa1331530-mRNA-1
chr8_4 exon 51080409 51080921 51080409 ID=Msa1331530-mRNA-1:exon:15001;Parent=Msa1331530-mRNA-1
chr8_4 exon 51081176 51081733 51081176 ID=Msa1331530-mRNA-1:exon:15002;Parent=Msa1331530-mRNA-1
chr8_4 five_prime_UTR 51076284 51076401 51076284 ID=Msa1331530-mRNA-1:five_prime_utr;Parent=Msa1331530-mRNA-1
chr8_4 CDS 51076402 51076645 51076402 ID=Msa1331530-mRNA-1:cds;Parent=Msa1331530-mRNA-1
chr8_4 CDS 51078555 51079969 51078555 ID=Msa1331530-mRNA-1:cds;Parent=Msa1331530-mRNA-1
chr8_4 CDS 51080409 51080921 51080409 ID=Msa1331530-mRNA-1:cds;Parent=Msa1331530-mRNA-1
chr8_4 CDS 51081176 51081343 51081176 ID=Msa1331530-mRNA-1:cds;Parent=Msa1331530-mRNA-1
chr8_4 three_prime_UTR 51081344 51081733 51081344 ID=Msa1331530-mRNA-1:three_prime_utr;Parent=Msa1331530-mRNA-1
Gene Sequence

>Msa1331530

ATGGCTGCAGAATCATTTCAAGTGGCAACTTCTTCACTCTGTAATCTCAATGGCTCTCACCGAAAACCAACCCTTCTTTCTCCACTTCGTTTCATGGCCACAGGTTTTCGCCCAGTACAATCCCGTTCTTTTGCTTCTTCTTCGTTATCACAATTCTTTGGAACTACTAGAATTAAATCCACTTCACCCCAGCTTGCTCCAAGAAGGAGAAATTTCTCAGTTTTCGCCATGTCCACTCCAGAGGAGGCGAAGCGTGCTGTTCCATTGAAAGATTATCGCAACATTGGTATCATGGCTCACATAGACGCTGGAAAGACAACTACAACTGAACGGATTCTCTTCTATACTGGAAGGAACTACAAAATTGGAGAGGTGCATGAGGGAACGGCAACAATGGACTGGATGGAACAAGAACAAGAAAGAGGGATTACCATTACTTCTGCTGCAACCACCACTTTCTGGGATAAGCACAGGATCAACATCATTGATACTCCTGGTCATGTTGACTTCACCTTAGAAGTGGAGCGTGCTCTTAGGGTGCTGGATGGAGCTATATGCTTGTTTGACAGTGTTGCTGGTGTGGAGCCACAATCAGAAACTGTGTGGAGGCAAGCTGATAGATATGGAGTCCCGCGAATTTGTTTTGTCAATAAAATGGACCGCCTTGGTGCGAACTTTTTCCGAACAAGAGACATGATAGTGACAAATTTGGGTGCTAAACCACTTGTACTTCAACTACCAATTGGTGCAGAAGATTCCTTTAAGGGAGTTATTGATCTTGTTAGGATGAAAGCCATAGTTTGGGGTGGAGAAGAACTTGGTGCCAAGTTTACCTATGAAGATATACCTGCAGATCTCCTAGAGCAGGCTCAAGATTACAGATCTCAGATGATAGAAACCATAGTTGAGTTAGATGATGAGGCTATGGAGAACTACCTAGAAGGAGTTGAACCAGATGAAGCAACTATAAAAAAATTAATCAGGAAGGGATCCATAGCAGCCACTTTTGTGCCAGTGTTGTGTGGATCAGCTTTCAAAAACAAGGGAGTCCAACCATTGTTAGATGCCGTAGTGGATTATCTACCATCACCACTTGACGTACCACCAATGAAGGGTACTGACCCTGAAAACCCAGAAGCAACAATAGAGAGGATAGCTAGTGATGATGAACCATTTTCTGGACTAGCTTTTAAGATCATGAGTGATTCATTTGTAGGCTCCCTTACATTTGTTAGGGTGTACTCTGGAAAGCTAACTGCTGGGTCTTATGTACTCAATTCAAACAAAGGGAAAAAGGAGAGAATTGGTCGACTTCTAGAAATGCATGCAAACAGCAGAGAAGACGTTAAAGTAGCTTTAACAGGGGATATTGTTGCTCTTGCTGGTTTGAAAGATACTATAACAGGTGAAACGTTGTGTGACCCCGAGAGTCCGGTCGTGCTTGAGCGGATGGACTTCCCTGATCCTGTGATTAAGATTGCAATTGAACCCAAAACTAAAGCTGATATTGACAAGATGGCAGCTGGTTTAGTCAAGCTTGCACAGGAAGACCCTTCTTTCCACTTCTCCCGTGATGAAGAGATAAATCAGACAGTGATTGAAGGAATGGGAGAATTGCATCTTGAAATCATTGTTGATCGTCTCAAAAGAGAATTTAAGGTTGAAGCTAATGTTGGTGCTCCCCAAGTAAACTACAGGGAAAGCATTTCCAAAATCCATGAAGTGAGGTATGTGCACAAAAAACAATCAGGTGGACAAGGTCAGTTTGCAGATATAACCGTACGGTTCGAACCGATGGAACCAGGCAGTGGATATGAATTCAAGAGTGAAATCAAAGGAGGAGCAGTTCCAAAAGAATACATTCCCGGGGTTGTTAAAGGATTGGAAGAGTGTATGAGCAATGGTGTTCTGGCCGGATTTCCAGTTGTCGATGTACGTGCAGTACTTGTGGATGGTACTTACCATGATGTAGATTCAAGTGTGTTGGCTTTCCAGTTGGCAGCAAGAGGAGCTTTTCGGGAAGGAATAAGAAAAGCCGGACCGAGAATGCTTGAACCTATAATGAAAGTTGAAGTTGTTACTCCTGAAGAACATTTAGGAGATGTAATTGGTGATCTCAACTCAAGAAGAGGCCAAATCAATAGTTTTGGTGACAAACCAGGTGGACTCAAGGTGGTTGATTCATTAGTACCTCTTGCTGAGATGTTTCAGTATGTCAGTACACTAAGAGGGATGACAAAGGGTCGTGCATCCTACTCTATGCAATTAGCCATGTTTGATGTGGTTCCTCAACACATTCAGAATCAACTTGCCACAAAAGTGCAAGAAGTTTCTGCATAA
Protein sequence

>Msa1331530

MAAESFQVATSSLCNLNGSHRKPTLLSPLRFMATGFRPVQSRSFASSSLSQFFGTTRIKSTSPQLAPRRRNFSVFAMSTPEEAKRAVPLKDYRNIGIMAHIDAGKTTTTERILFYTGRNYKIGEVHEGTATMDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAGVEPQSETVWRQADRYGVPRICFVNKMDRLGANFFRTRDMIVTNLGAKPLVLQLPIGAEDSFKGVIDLVRMKAIVWGGEELGAKFTYEDIPADLLEQAQDYRSQMIETIVELDDEAMENYLEGVEPDEATIKKLIRKGSIAATFVPVLCGSAFKNKGVQPLLDAVVDYLPSPLDVPPMKGTDPENPEATIERIASDDEPFSGLAFKIMSDSFVGSLTFVRVYSGKLTAGSYVLNSNKGKKERIGRLLEMHANSREDVKVALTGDIVALAGLKDTITGETLCDPESPVVLERMDFPDPVIKIAIEPKTKADIDKMAAGLVKLAQEDPSFHFSRDEEINQTVIEGMGELHLEIIVDRLKREFKVEANVGAPQVNYRESISKIHEVRYVHKKQSGGQGQFADITVRFEPMEPGSGYEFKSEIKGGAVPKEYIPGVVKGLEECMSNGVLAGFPVVDVRAVLVDGTYHDVDSSVLAFQLAARGAFREGIRKAGPRMLEPIMKVEVVTPEEHLGDVIGDLNSRRGQINSFGDKPGGLKVVDSLVPLAEMFQYVSTLRGMTKGRASYSMQLAMFDVVPQHIQNQLATKVQEVSA*