AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0906180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0906180 MtrunA17_Chr6g0454071 95.916 955 22 1 1 938 1 955 0.0 1866
Msa0906180 MtrunA17_Chr7g0218421 86.925 979 101 5 1 955 1 976 0.0 1712
Msa0906180 MtrunA17_Chr3g0137071 70.270 888 245 3 71 940 84 970 0.0 1301
Msa0906180 MtrunA17_Chr4g0061371 50.810 864 384 9 82 918 4 853 0.0 837
Msa0906180 MtrunA17_Chr7g0225161 48.789 867 396 11 82 918 4 852 0.0 789
Msa0906180 MtrunA17_Chr3g0131711 45.943 875 396 13 82 932 93 914 0.0 725
Msa0906180 MtrunA17_Chr8g0385811 45.838 877 401 14 71 926 89 912 0.0 721
Msa0906180 MtrunA17_Chr3g0134631 44.204 923 442 15 26 926 42 913 0.0 713
Msa0906180 MtrunA17_Chr3g0131351 39.135 902 438 16 82 927 102 948 0.0 602
Msa0906180 MtrunA17_Chr3g0102771 49.221 321 160 1 600 920 458 775 6.82e-104 343
Msa0906180 MtrunA17_Chr3g0102771 34.913 401 213 7 84 481 83 438 7.24e-60 220
Msa0906180 MtrunA17_Chr2g0329561 41.501 453 245 5 467 918 15 448 1.16e-101 326
Msa0906180 MtrunA17_Chr3g0135231 35.935 551 270 13 82 615 84 568 2.06e-87 293
Msa0906180 MtrunA17_Chr3g0135231 45.545 101 51 1 738 838 546 642 6.63e-18 89.0
Msa0906180 MtrunA17_Chr2g0277781 47.315 298 147 3 604 900 2 290 1.00e-84 274
Msa0906180 MtrunA17_Chr1g0188061 60.638 94 37 0 684 777 224 317 4.40e-31 125
Msa0906180 MtrunA17_Chr7g0260931 55.319 94 42 0 591 684 1 94 3.51e-29 112
Msa0906180 MtrunA17_Chr2g0277771 31.655 139 86 2 781 919 1 130 1.55e-19 87.0
Msa0906180 MtrunA17_Chr3g0088791 58.000 50 21 0 113 162 1 50 4.57e-13 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0906180 AT5G15450.1 82.618 932 137 4 30 942 31 956 0.0 1578
Msa0906180 AT2G25140.1 67.291 908 268 7 55 944 63 959 0.0 1248
Msa0906180 AT1G74310.1 50.523 861 388 8 82 918 4 850 0.0 831
Msa0906180 AT1G74310.2 51.033 823 365 8 82 880 4 812 0.0 800
Msa0906180 AT5G50920.1 46.536 866 392 13 82 926 96 911 0.0 730
Msa0906180 AT3G48870.2 45.862 870 394 14 71 919 77 890 0.0 719
Msa0906180 AT3G48870.1 45.862 870 394 14 71 919 108 921 0.0 718
Msa0906180 AT3G48870.4 45.862 870 394 14 71 919 108 921 0.0 718
Msa0906180 AT3G48870.3 45.862 870 394 14 71 919 108 921 0.0 718
Msa0906180 AT5G51070.1 39.525 926 444 16 40 916 59 917 0.0 630
Msa0906180 AT4G14670.1 50.887 564 242 5 176 721 76 622 0.0 539
Msa0906180 AT3G45450.1 32.329 365 192 8 82 438 3 320 2.21e-45 167
Msa0906180 AT4G30350.1 30.769 169 105 3 631 797 577 735 5.90e-12 70.5
Msa0906180 AT5G57710.1 27.632 152 94 3 666 812 655 795 8.44e-11 66.6

Find 256 sgRNAs with CRISPR-Local

Find 539 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATGTATTCCTTCAAATTT+TGG 0.107959 6_2:-4738617 Msa0906180:CDS
ATCTGACAATGCTACTTATT+TGG 0.180599 6_2:+4738356 None:intergenic
ATTCAACTGTGTTAGGTTCT+AGG 0.210148 6_2:-4743132 Msa0906180:intron
ACAGAGCTCTCTCTCCTAAA+AGG 0.238011 6_2:-4739998 Msa0906180:CDS
AGAGAAGCTGTTATATTTAG+AGG 0.238550 6_2:-4739010 Msa0906180:CDS
TCAGCTTATATCTCTTGATA+TGG 0.240300 6_2:-4741647 Msa0906180:intron
AGGGAATTCAAGAAAGAATA+TGG 0.250468 6_2:-4743054 Msa0906180:CDS
TTGTTTCGGTTCCGGGAAAT+TGG 0.264135 6_2:+4746101 None:intergenic
AGCAGCTGCTAAACTGAAAA+TGG 0.272358 6_2:-4740246 Msa0906180:CDS
ACCGAACAATAAACTGTTTA+GGG 0.274995 6_2:+4745958 None:intergenic
TTCAATGTTGGGGCGTGATT+TGG 0.278122 6_2:-4743097 Msa0906180:CDS
TATTCTTCGAGGAGAATTTA+AGG 0.278524 6_2:-4737898 Msa0906180:CDS
TCAGTTGAGCACTTGGTTCT+TGG 0.281736 6_2:-4743018 Msa0906180:CDS
TTGAGCATTGTTTCGGTTCC+GGG 0.289478 6_2:+4746094 None:intergenic
TTGTTCTCCTTTGCCACTTC+GGG 0.293362 6_2:+4743642 None:intergenic
AGGGTCAAGTTTCCCTGCTT+TGG 0.305513 6_2:+4742465 None:intergenic
ATCCAACTTCTTGGAAGTTT+AGG 0.306509 6_2:-4737996 Msa0906180:CDS
GAGCCTGCTATCCAACTTCT+TGG 0.307199 6_2:-4738005 Msa0906180:CDS
ATCATTCTGTTCCAATTTCC+CGG 0.310174 6_2:-4746112 Msa0906180:CDS
AAGAACAATCCTGTGCTAAT+TGG 0.318260 6_2:-4742385 Msa0906180:CDS
ATTGAGCATTGTTTCGGTTC+CGG 0.320757 6_2:+4746093 None:intergenic
GAATCAGCCGGTTCAATGTT+GGG 0.324402 6_2:-4743108 Msa0906180:CDS
TTTGCCCAAGATCGACGATT+TGG 0.327059 6_2:-4742994 Msa0906180:CDS
CTCTCTCCTAAAAGGGAAAC+AGG 0.328465 6_2:-4739990 Msa0906180:CDS
ATCGTTCTGTTATTATAGAT+TGG 0.336034 6_2:-4737669 Msa0906180:three_prime_UTR
AGGATTGTTCTTTGTTCTCC+TGG 0.337734 6_2:+4742396 None:intergenic
GATATGGGTGCACTTATTGC+TGG 0.342377 6_2:-4741631 Msa0906180:CDS
AACTTGGCATGAAAGATAAA+AGG 0.342795 6_2:+4737712 None:intergenic
CTGCACTTGATGAGATTAAT+AGG 0.349445 6_2:-4740205 Msa0906180:CDS
CTTGACCTACAACACGCTTA+TGG 0.349824 6_2:+4738980 None:intergenic
GAACCGAAACAATGCTCAAT+TGG 0.350783 6_2:-4746090 Msa0906180:CDS
ACCGGCCTAGCACCATAGTT+TGG 0.353196 6_2:+4737966 None:intergenic
TCATTTCAAATGCTATTTCC+AGG 0.359766 6_2:+4737523 None:intergenic
AAAATACCATTTCAATACTA+AGG 0.365010 6_2:-4740548 Msa0906180:CDS
CACCGAACAATAAACTGTTT+AGG 0.368036 6_2:+4745957 None:intergenic
CTTGTTCTCCTTTGCCACTT+CGG 0.369481 6_2:+4743641 None:intergenic
GTCGAATCTTTACCAAGGTT+GGG 0.369618 6_2:-4743554 Msa0906180:CDS
TTATTGCTGGAGCAAAATAT+CGG 0.370612 6_2:-4741618 Msa0906180:CDS
GATTGTTGAAGTTTAGAAAT+CGG 0.371471 6_2:+4739039 None:intergenic
AATCGCTAGCTTCATGTTCA+TGG 0.375106 6_2:-4738887 Msa0906180:CDS
TGGAATTGAATTCAAGGAAG+TGG 0.375338 6_2:+4746031 None:intergenic
CAGCTTATATCTCTTGATAT+GGG 0.380093 6_2:-4741646 Msa0906180:CDS
TCTTCCCAAATCGTCGATCT+TGG 0.384015 6_2:+4742989 None:intergenic
TTCAACTGTGTTAGGTTCTA+GGG 0.393170 6_2:-4743131 Msa0906180:intron
ATGAGATCCATACAGTTGTT+GGG 0.403955 6_2:-4741519 Msa0906180:CDS
TTAGGTTACGATCCAAACTA+TGG 0.404593 6_2:-4737978 Msa0906180:CDS
CTAGTAATTACTACCTTTGT+CGG 0.404943 6_2:+4740419 None:intergenic
GAAGTAACTGGGAATGATAT+TGG 0.406410 6_2:-4739090 Msa0906180:CDS
GACCCAATTGAGCATTGTTT+CGG 0.407035 6_2:+4746087 None:intergenic
AAGTAGCATTGTCAGATTGC+AGG 0.411867 6_2:-4738350 Msa0906180:intron
ATTGTTGAAGTTTAGAAATC+GGG 0.413099 6_2:+4739040 None:intergenic
AACCTAAACTTCCAAGAAGT+TGG 0.413866 6_2:+4737994 None:intergenic
AAACTGCTATAGAGTCTGTA+AGG 0.418322 6_2:-4742927 Msa0906180:CDS
CTTCAATGGAATTGAATTCA+AGG 0.418642 6_2:+4746025 None:intergenic
ATATTCTTTCTTGAATTCCC+TGG 0.423978 6_2:+4743056 None:intergenic
CGTCGAATCTTTACCAAGGT+TGG 0.426999 6_2:-4743555 Msa0906180:CDS
TTGCCCAAGATCGACGATTT+GGG 0.427630 6_2:-4742993 Msa0906180:CDS
CATTTCTGACACTGCACTTG+TGG 0.428197 6_2:-4740487 Msa0906180:CDS
ATGTTGAGAGAGGAAGTAAC+TGG 0.429473 6_2:-4739102 Msa0906180:CDS
TGCCATCATCCAAAATTTGA+AGG 0.432024 6_2:+4738608 None:intergenic
TACTGTGCGGCCTTGTGAAT+CGG 0.433455 6_2:+4738579 None:intergenic
TCATCATCTCTTCCTATGAC+AGG 0.434902 6_2:+4742445 None:intergenic
ACCCTAAACAGTTTATTGTT+CGG 0.437470 6_2:-4745959 Msa0906180:CDS
ACAGCAAGAATTCACAGAAA+TGG 0.437953 6_2:-4743688 Msa0906180:CDS
TCAAACAAAATAACTGCATA+AGG 0.438423 6_2:+4738670 None:intergenic
ATAAATCACAGCTATTGATC+TGG 0.439652 6_2:-4740276 Msa0906180:intron
TCTCAAAATTCGTGTAAACT+TGG 0.442353 6_2:+4737696 None:intergenic
AGATTGATCGGTGCTCCTCC+TGG 0.444968 6_2:-4738745 Msa0906180:CDS
GACCAAGCATAGGCTTTAAG+AGG 0.449483 6_2:+4740688 None:intergenic
ATTTGTATCAGTTGAGCACT+TGG 0.453165 6_2:-4743025 Msa0906180:CDS
GCTTTATTAGAGCAAAAGAA+TGG 0.453535 6_2:-4743585 Msa0906180:CDS
AATGTTGGGGCGTGATTTGG+AGG 0.454588 6_2:-4743094 Msa0906180:CDS
GGGAAACTTGACCCTGTCAT+AGG 0.458148 6_2:-4742457 Msa0906180:CDS
AGGCATTGATTCAGAGAGCC+AGG 0.459300 6_2:-4743074 Msa0906180:CDS
GATGAGATCCATACAGTTGT+TGG 0.460700 6_2:-4741520 Msa0906180:CDS
GAACTCCATAAGCGTGTTGT+AGG 0.462881 6_2:-4738985 Msa0906180:CDS
CAGACCCCTTAGTATTGAAA+TGG 0.463665 6_2:+4740542 None:intergenic
ATCACGCCCCAACATTGAAC+CGG 0.464229 6_2:+4743101 None:intergenic
CTTCCCAAATCGTCGATCTT+GGG 0.465484 6_2:+4742990 None:intergenic
TCGGCTACTGCCTTGACAGC+AGG 0.466811 6_2:+4738955 None:intergenic
TGAAATGTGACCACGTTGTT+GGG 0.467683 6_2:+4746271 None:intergenic
AAAATATCGGGGAGAATTTG+AGG 0.469676 6_2:-4741605 Msa0906180:CDS
TTCGATTCATCAAAGCTTGA+GGG 0.470736 6_2:+4741920 None:intergenic
GGGAATTCAAGAAAGAATAT+GGG 0.472098 6_2:-4743053 Msa0906180:CDS
TTGAAATGTGACCACGTTGT+TGG 0.472329 6_2:+4746270 None:intergenic
GTTGTTGGGTTTGTTATGTT+CGG 0.472398 6_2:+4746285 None:intergenic
CATGTAGGAAGCAAGGGCCT+TGG 0.473207 6_2:+4738834 None:intergenic
TACCTGCCCCAACAACTGTA+TGG 0.479767 6_2:+4741512 None:intergenic
AACCGAAACAATGCTCAATT+GGG 0.480526 6_2:-4746089 Msa0906180:CDS
AAATACCATTTCAATACTAA+GGG 0.480787 6_2:-4740547 Msa0906180:CDS
TTCATGTTCATGGGCCCCAC+AGG 0.481808 6_2:-4738877 Msa0906180:CDS
TCGAGGAGAATTTAAGGAAG+AGG 0.483569 6_2:-4737892 Msa0906180:CDS
GTCGGTAGCCTCCAGAAGCC+GGG 0.483627 6_2:+4743521 None:intergenic
TGACACTGCGCCAAAAGATT+CGG 0.484035 6_2:-4738488 Msa0906180:CDS
AGCAAGGGCCTTGGCTAGCT+CGG 0.485503 6_2:+4738843 None:intergenic
TATTGCTGGAGCAAAATATC+GGG 0.485918 6_2:-4741617 Msa0906180:CDS
CTCTCAGATCGATACATAAG+TGG 0.486173 6_2:-4740453 Msa0906180:CDS
TTTGTTTGATGAGATTGAAA+AGG 0.486902 6_2:-4738656 Msa0906180:CDS
TTGACAGCAATGGCCAAAGC+AGG 0.487438 6_2:-4742478 Msa0906180:CDS
TTCAATACTAAGGGGTCTGC+GGG 0.487780 6_2:-4740538 Msa0906180:CDS
TGTTGAATCACTCGCTTCAC+CGG 0.488692 6_2:+4737948 None:intergenic
GGAATCAGCCGGTTCAATGT+TGG 0.488956 6_2:-4743109 Msa0906180:CDS
CAGACAAGGCTTCTAGAGAT+AGG 0.490230 6_2:-4740036 Msa0906180:intron
CAGAGCTCTCTCTCCTAAAA+GGG 0.492706 6_2:-4739997 Msa0906180:CDS
CTTCCAAGAAGTTGGATAGC+AGG 0.492964 6_2:+4738002 None:intergenic
TCTTCGTATCCAACGTATCC+AGG 0.494198 6_2:+4738727 None:intergenic
TAGTAATTACTACCTTTGTC+GGG 0.494339 6_2:+4740420 None:intergenic
ATACAGAAGAAGCACTTGTT+CGG 0.495433 6_2:-4738807 Msa0906180:CDS
GGGCGAGCTTACCGAGCAAT+GGG 0.496070 6_2:-4739969 Msa0906180:CDS
TTCTGTAACTTCTTTGAGAA+CGG 0.498000 6_2:+4741570 None:intergenic
ATCCATACAGTTGTTGGGGC+AGG 0.500826 6_2:-4741514 Msa0906180:intron
TTACATGAATATATGAGCTC+TGG 0.501224 6_2:-4739132 Msa0906180:CDS
GCGATCCAACGTTCAAGAGC+AGG 0.502010 6_2:-4738931 Msa0906180:CDS
TCGGTCTTACCGACACCTGT+GGG 0.502050 6_2:+4738862 None:intergenic
CCTGTGCTAATTGGTGAGCC+TGG 0.504014 6_2:-4742376 Msa0906180:CDS
GGAATTGAATTCAAGGAAGT+GGG 0.504651 6_2:+4746032 None:intergenic
GGAAAGACTGCTATTTCTGA+AGG 0.508523 6_2:-4742349 Msa0906180:CDS
TTGCTGAGGACGTTGACCAT+TGG 0.509376 6_2:+4737833 None:intergenic
CTTTATTAGAGCAAAAGAAT+GGG 0.509523 6_2:-4743584 Msa0906180:CDS
GGATAGCAGGCTCTGTTACT+CGG 0.511653 6_2:+4738015 None:intergenic
GCTCGGCCTGTAGGATCTCA+AGG 0.511667 6_2:+4739241 None:intergenic
CGCCAGTCAGTTATCGATCA+AGG 0.513657 6_2:-4742901 Msa0906180:intron
AATCTACTGCTAAAGACAGC+AGG 0.516797 6_2:-4737776 Msa0906180:CDS
TCAACTCTATTCATGAACTC+GGG 0.517096 6_2:+4738412 None:intergenic
TTTGGTCACGGTCAAGAGGC+CGG 0.518482 6_2:+4738374 None:intergenic
CTTGGTTGATCACCTTGGGT+TGG 0.519165 6_2:+4743484 None:intergenic
TTCTTTGCAACGACAACTCG+AGG 0.523246 6_2:-4739169 Msa0906180:CDS
CTTGCAAAGGGTATTCTTCG+AGG 0.524988 6_2:-4737909 Msa0906180:CDS
ATTAATCTCATCAAGTGCAG+TGG 0.527920 6_2:+4740208 None:intergenic
GAAAGATATGAGTTGCATCA+TGG 0.527924 6_2:-4740516 Msa0906180:CDS
AACTGCTATAGAGTCTGTAA+GGG 0.528894 6_2:-4742926 Msa0906180:CDS
ATCGCTAGCTTCATGTTCAT+GGG 0.529259 6_2:-4738886 Msa0906180:CDS
TTGGCGCTGAATGTGCTTGT+CGG 0.532060 6_2:+4743503 None:intergenic
TCCAAACTATGGTGCTAGGC+CGG 0.532503 6_2:-4737967 Msa0906180:CDS
CATACTCTCGCTCGGCCTGT+AGG 0.532878 6_2:+4739232 None:intergenic
TGGAAAAGATTTGACAGCAA+TGG 0.534502 6_2:-4742488 Msa0906180:CDS
AAACATGAAGCAGCGTGTAA+TGG 0.536079 6_2:-4738458 Msa0906180:CDS
ATCAACTCTATTCATGAACT+CGG 0.536791 6_2:+4738411 None:intergenic
GATTGATATGAGTGAGTACA+TGG 0.539698 6_2:-4738785 Msa0906180:CDS
GGAAGGAAAATATGAAGCCT+TGG 0.542091 6_2:-4742518 Msa0906180:CDS
GTGGAAAATGAACTTGCAAA+GGG 0.543223 6_2:-4737921 Msa0906180:CDS
CTCGGTCTTACCGACACCTG+TGG 0.543746 6_2:+4738861 None:intergenic
TCGAATCTTTACCAAGGTTG+GGG 0.544403 6_2:-4743553 Msa0906180:CDS
AACCTCTTAAAGCCTATGCT+TGG 0.545352 6_2:-4740690 Msa0906180:CDS
TGTGGAAAATGAACTTGCAA+AGG 0.545576 6_2:-4737922 Msa0906180:CDS
TTCATGGGCCCCACAGGTGT+CGG 0.546373 6_2:-4738871 Msa0906180:CDS
GTACTGTGATCCCACATTTG+AGG 0.546821 6_2:+4738528 None:intergenic
AAATGTCTTCATAGAATCTG+TGG 0.547429 6_2:+4737744 None:intergenic
GGAGAACAAGCATCAAATTG+TGG 0.550674 6_2:-4743628 Msa0906180:CDS
CTCAAGCTTTGATGAATCGA+AGG 0.550839 6_2:-4741918 Msa0906180:CDS
AGGGCGAGCTTACCGAGCAA+TGG 0.550944 6_2:-4739970 Msa0906180:CDS
CGAGGGGAACTGCGATGCAT+TGG 0.551375 6_2:-4740666 Msa0906180:CDS
CATACGGTTTCAAGATTGAT+CGG 0.554611 6_2:-4738757 Msa0906180:CDS
GACCTTGATCGATAACTGAC+TGG 0.554937 6_2:+4742899 None:intergenic
ACGAATGGTGCTATGGATGC+TGG 0.556016 6_2:-4740714 Msa0906180:CDS
CAACAACATTAGATGAGTAT+CGG 0.557426 6_2:-4740641 Msa0906180:CDS
ACAACTCGAGGGTGCAGAGA+AGG 0.559810 6_2:-4739157 Msa0906180:CDS
GGTGCATTCAAATTCTCTCC+AGG 0.560236 6_2:-4742414 Msa0906180:CDS
AGGTGCTACGAATGGTGCTA+TGG 0.561464 6_2:-4740721 Msa0906180:CDS
CGTGCTGCTGAATTAAAGTA+CGG 0.561695 6_2:-4739201 Msa0906180:CDS
CATCATCATGACCTCAAATG+TGG 0.561967 6_2:-4738539 Msa0906180:CDS
TTGGCTCAGAGAATTGTTCA+AGG 0.562222 6_2:-4741949 Msa0906180:CDS
GCGAGTGATTCAACAAAATG+TGG 0.563340 6_2:-4737940 Msa0906180:CDS
ATGAACATGAAGCTAGCGAT+TGG 0.563501 6_2:+4738889 None:intergenic
ATAGACCTGCTCTTGAACGT+TGG 0.564029 6_2:+4738926 None:intergenic
CTTCGATTCATCAAAGCTTG+AGG 0.564569 6_2:+4741919 None:intergenic
TGCTGTCAAGGCAGTAGCCG+AGG 0.565302 6_2:-4738953 Msa0906180:CDS
AGGTCAAGATCCTGCTGTCA+AGG 0.566975 6_2:-4738965 Msa0906180:CDS
GTCATCGCCCGAAGTGGCAA+AGG 0.568123 6_2:-4743649 Msa0906180:CDS
CATCATCTCTTCCTATGACA+GGG 0.569503 6_2:+4742446 None:intergenic
TAAAGCCTATGCTTGGTCGA+GGG 0.571569 6_2:-4740683 Msa0906180:CDS
CAATGCTACTTATTTGGTCA+CGG 0.572092 6_2:+4738362 None:intergenic
ATCGGGGAGAATTTGAGGAT+CGG 0.572296 6_2:-4741600 Msa0906180:CDS
GGTGTTATCGACCCCAACCT+TGG 0.572863 6_2:+4743542 None:intergenic
TATTGAACATGTAGGAAGCA+AGG 0.573005 6_2:+4738827 None:intergenic
CTAATTGGTGAGCCTGGTGT+TGG 0.573213 6_2:-4742370 Msa0906180:CDS
AATCAGCCGGTTCAATGTTG+GGG 0.575812 6_2:-4743107 Msa0906180:CDS
TTAAAGCCTATGCTTGGTCG+AGG 0.576320 6_2:-4740684 Msa0906180:CDS
GGAAGTGGGTTTCAATTGAG+AGG 0.577142 6_2:+4746046 None:intergenic
ACGATCCAAACTATGGTGCT+AGG 0.581916 6_2:-4737971 Msa0906180:CDS
CTCATCGCCGCATAATTGAT+CGG 0.583749 6_2:-4746190 Msa0906180:five_prime_UTR
TGAAAACGACGTTCTAGCGC+AGG 0.585733 6_2:+4740600 None:intergenic
AAATCGGGATACCAGTCCAC+TGG 0.585940 6_2:+4739055 None:intergenic
TTAATCTCATCAAGTGCAGT+GGG 0.587974 6_2:+4740209 None:intergenic
CTTATTTGGTCACGGTCAAG+AGG 0.589190 6_2:+4738370 None:intergenic
AAAGCCTATGCTTGGTCGAG+GGG 0.589635 6_2:-4740682 Msa0906180:CDS
ATCATCATGACCTCAAATGT+GGG 0.591622 6_2:-4738538 Msa0906180:CDS
TGAGTACATGGAAAAGCATA+CGG 0.592004 6_2:-4738773 Msa0906180:CDS
TGAGATCCATACAGTTGTTG+GGG 0.593092 6_2:-4741518 Msa0906180:CDS
TCTTCAGTCAATCAAAGAAG+AGG 0.594648 6_2:-4739921 Msa0906180:intron
ATCTACTGCTAAAGACAGCA+GGG 0.595696 6_2:-4737775 Msa0906180:CDS
GAGGTAAAAGAAGCTTGAAA+CGG 0.596274 6_2:+4746065 None:intergenic
TGAGATTGAAAAGGCACACT+CGG 0.597217 6_2:-4738647 Msa0906180:CDS
ATTGAACATGTAGGAAGCAA+GGG 0.598329 6_2:+4738828 None:intergenic
TCTCAGATCGATACATAAGT+GGG 0.601472 6_2:-4740452 Msa0906180:CDS
AGTAAACCTTGAGATCCTAC+AGG 0.601544 6_2:-4739247 Msa0906180:CDS
CGATAACACCCGGCTTCTGG+AGG 0.602040 6_2:-4743529 Msa0906180:CDS
TAACTGCATAAGGTCTTCGA+CGG 0.602587 6_2:+4738680 None:intergenic
AAAGAAGTTACAGAATCTGA+TGG 0.602939 6_2:-4741562 Msa0906180:CDS
AGTTCCCCTCGACCAAGCAT+AGG 0.605658 6_2:+4740678 None:intergenic
GAAAGACTGCTATTTCTGAA+GGG 0.606630 6_2:-4742348 Msa0906180:intron
TCAACTGTGTTAGGTTCTAG+GGG 0.607230 6_2:-4743130 Msa0906180:intron
TTTCAATACTAAGGGGTCTG+CGG 0.609191 6_2:-4740539 Msa0906180:CDS
GTGTGCAGATTCAAGTGGAA+AGG 0.609473 6_2:-4745937 Msa0906180:intron
GGAATTCAAGAAAGAATATG+GGG 0.610872 6_2:-4743052 Msa0906180:CDS
GATTGTGTCATCGCCCGAAG+TGG 0.611796 6_2:-4743655 Msa0906180:CDS
TTATTGAGAGTTCGAAACCA+TGG 0.618467 6_2:+4746231 None:intergenic
GGTGCTCCTCCTGGATACGT+TGG 0.618766 6_2:-4738736 Msa0906180:CDS
CCAGGCTCACCAATTAGCAC+AGG 0.619879 6_2:+4742376 None:intergenic
ATTATATGCAAGCTATACAC+AGG 0.620599 6_2:+4737637 None:intergenic
ATAGCAGTCTTTCCAACACC+AGG 0.621096 6_2:+4742358 None:intergenic
CGGTAAGACCGAGCTAGCCA+AGG 0.621900 6_2:-4738851 Msa0906180:CDS
TCTTGAACGTTGGATCGCCT+CGG 0.622253 6_2:+4738936 None:intergenic
ATTTAGATCATACTCTCGCT+CGG 0.622435 6_2:+4739224 None:intergenic
CAACTCTATTCATGAACTCG+GGG 0.628408 6_2:+4738413 None:intergenic
GAAATTGTGAGCCAGTGGAC+TGG 0.628591 6_2:-4739066 Msa0906180:CDS
TGACAGCAATGGCCAAAGCA+GGG 0.628981 6_2:-4742477 Msa0906180:CDS
AAATTTGTTATAGATCCGGA+AGG 0.631308 6_2:-4742535 Msa0906180:intron
GCACATTCAGCGCCAACCCA+AGG 0.633668 6_2:-4743496 Msa0906180:intron
TAGGTTCTAGGGGAATCAGC+CGG 0.634482 6_2:-4743120 Msa0906180:CDS
TGGTAAGTCTATGTTGAGAG+AGG 0.634759 6_2:-4739112 Msa0906180:CDS
GTTCGGTGTGCAGATTCAAG+TGG 0.635388 6_2:-4745942 Msa0906180:CDS
GGATACGTTGGATACGAAGA+GGG 0.636021 6_2:-4738724 Msa0906180:CDS
GAGAGAGCTCTGTCTCAAGA+CGG 0.636630 6_2:+4740008 None:intergenic
GGCATTGATTCAGAGAGCCA+GGG 0.643747 6_2:-4743073 Msa0906180:CDS
AAGAATTCACAGAAATGGCG+TGG 0.643969 6_2:-4743683 Msa0906180:CDS
TCAAGCTTTGATGAATCGAA+GGG 0.646292 6_2:-4741917 Msa0906180:intron
TGCACGTCGAATCTTTACCA+AGG 0.647011 6_2:-4743559 Msa0906180:CDS
GTATCGGAAGTATATTGAGA+AGG 0.647452 6_2:-4740625 Msa0906180:CDS
TTCTTCTGTATTGAACATGT+AGG 0.647488 6_2:+4738819 None:intergenic
TACGTTGGATACGAAGAGGG+AGG 0.648957 6_2:-4738721 Msa0906180:CDS
ACGTTGGATACGAAGAGGGA+GGG 0.649164 6_2:-4738720 Msa0906180:CDS
CGAAGAGGGAGGGCAACTAA+CGG 0.649419 6_2:-4738710 Msa0906180:CDS
TTGGTGAAATTGTGAGCCAG+TGG 0.653551 6_2:-4739071 Msa0906180:CDS
TCTTTGCAACGACAACTCGA+GGG 0.654780 6_2:-4739168 Msa0906180:CDS
AGGTTGGGGTCGATAACACC+CGG 0.656725 6_2:-4743539 Msa0906180:CDS
CCTATGCTAGGTGCTACGAA+TGG 0.656874 6_2:-4740729 Msa0906180:intron
TGGATACGTTGGATACGAAG+AGG 0.657134 6_2:-4738725 Msa0906180:CDS
GAAGTCACAATACTCGCCAA+TGG 0.657171 6_2:-4737849 Msa0906180:CDS
GACGTCGTTGAAGCCATCGT+CGG 0.658464 6_2:+4746155 None:intergenic
TGTTGAGAGAGGAAGTAACT+GGG 0.662343 6_2:-4739101 Msa0906180:CDS
AAGCTAGCGATTGGACGATG+AGG 0.662558 6_2:+4738898 None:intergenic
ACTGCTATAGAGTCTGTAAG+GGG 0.666007 6_2:-4742925 Msa0906180:CDS
ACAAACACTTCACTTCACCA+TGG 0.667018 6_2:-4746248 Msa0906180:five_prime_UTR
GGTCATGATGATGACAGTGT+TGG 0.668891 6_2:+4738549 None:intergenic
AATACCATTTCAATACTAAG+GGG 0.671397 6_2:-4740546 Msa0906180:CDS
CGGTCTTACCGACACCTGTG+GGG 0.675391 6_2:+4738863 None:intergenic
GGCAGAGTAACCGATTCACA+AGG 0.679052 6_2:-4738589 Msa0906180:CDS
TCTCTCCTAAAAGGGAAACA+GGG 0.679633 6_2:-4739989 Msa0906180:CDS
GAAGAGATGATGAAATACGC+AGG 0.680478 6_2:-4742435 Msa0906180:CDS
GAAAACTCCGATCAATTATG+CGG 0.684613 6_2:+4746183 None:intergenic
ATCACAGTACATTCTCAACA+CGG 0.695499 6_2:-4738515 Msa0906180:CDS
ATTGCTGGAGCAAAATATCG+GGG 0.716683 6_2:-4741616 Msa0906180:CDS
ACATAACAAACCCAACAACG+TGG 0.730774 6_2:-4746281 Msa0906180:five_prime_UTR
TGTTGGTAAAACTTACTGTG+CGG 0.738743 6_2:+4738566 None:intergenic
TCGTATCCAACGTATCCAGG+AGG 0.739882 6_2:+4738730 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAATATAGTTATTTTTTC+TGG - chr6_2:4739703-4739722 Msa0906180:intron 10.0%
!! TTATTAAGTTTATAATTTGA+TGG - chr6_2:4740373-4740392 Msa0906180:intron 10.0%
!!! CAAACATATTTTAATTAAAA+CGG + chr6_2:4741019-4741038 None:intergenic 10.0%
!! AGTATATTATAATAACTAAA+TGG - chr6_2:4745610-4745629 Msa0906180:intron 10.0%
!! TAAAAACTTGTATATGAATT+TGG - chr6_2:4737856-4737875 Msa0906180:CDS 15.0%
!! TAATATCCTAATAAGAAAAT+AGG + chr6_2:4738094-4738113 None:intergenic 15.0%
!! AATAATGAATTACATTATGA+AGG + chr6_2:4738271-4738290 None:intergenic 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG + chr6_2:4738734-4738753 None:intergenic 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + chr6_2:4738837-4738856 None:intergenic 15.0%
!! AAAATATCCTTATTAACTAT+TGG + chr6_2:4738861-4738880 None:intergenic 15.0%
!!! AATAGTTAATAAGGATATTT+TGG - chr6_2:4738860-4738879 Msa0906180:CDS 15.0%
!! ATTTGTATATATAGGAATTT+AGG - chr6_2:4738998-4739017 Msa0906180:CDS 15.0%
!! ACTTAATAAAATTCCTATTT+AGG + chr6_2:4740362-4740381 None:intergenic 15.0%
!!! TTTTTGAAAGTTGATTTATT+TGG - chr6_2:4742302-4742321 Msa0906180:intron 15.0%
!! TAGTTGAAAATAAAAAATCT+TGG - chr6_2:4743371-4743390 Msa0906180:intron 15.0%
!!! AAAAAAAATAAGAGAACTTT+TGG + chr6_2:4743902-4743921 None:intergenic 15.0%
!! TATGATATATTATACCTAAT+GGG + chr6_2:4744354-4744373 None:intergenic 15.0%
!! ATATGATATATTATACCTAA+TGG + chr6_2:4744355-4744374 None:intergenic 15.0%
!!! ACATTATATTTTTTTTTTCC+TGG - chr6_2:4746229-4746248 Msa0906180:five_prime_UTR 15.0%
!! AGTGTAAAATTAAGAATACA+TGG - chr6_2:4738200-4738219 Msa0906180:intron 20.0%
!! ATTCATTATTAAGAAACCAT+TGG - chr6_2:4738281-4738300 Msa0906180:intron 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + chr6_2:4738774-4738793 None:intergenic 20.0%
!! TTTAAAAGTAATACTTTGGA+AGG + chr6_2:4738833-4738852 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG - chr6_2:4738851-4738870 Msa0906180:CDS 20.0%
!! AATGATTAAAAGAAAGAGAA+TGG + chr6_2:4738894-4738913 None:intergenic 20.0%
!! GGACATATATTTGTATATAT+AGG - chr6_2:4738990-4739009 Msa0906180:CDS 20.0%
!! TTATCTCATACTATCAATTA+TGG - chr6_2:4739306-4739325 Msa0906180:intron 20.0%
!! TAAAAACAACTTATAGGTAA+TGG + chr6_2:4739461-4739480 None:intergenic 20.0%
!! CTATAGTCAAAAAGAAAATA+AGG + chr6_2:4739562-4739581 None:intergenic 20.0%
!! TATTCACAAGTACTTATATA+TGG - chr6_2:4739590-4739609 Msa0906180:intron 20.0%
!! TAAAAGAATTTGTGTAATAG+TGG + chr6_2:4739660-4739679 None:intergenic 20.0%
!! TAACATAAAAGCTAATATGA+TGG + chr6_2:4739833-4739852 None:intergenic 20.0%
!! TATAAAGTTAAGACCTAAAT+AGG - chr6_2:4740346-4740365 Msa0906180:intron 20.0%
!!! TACAAATTGAGTTTTGTTTT+TGG - chr6_2:4740463-4740482 Msa0906180:CDS 20.0%
!!! CTTTTTATAGTTACTATTAG+TGG - chr6_2:4740910-4740929 Msa0906180:intron 20.0%
!! TTTAAATTGGAAAATAGTTG+TGG - chr6_2:4741116-4741135 Msa0906180:intron 20.0%
!!! ACTTAAATTTGTTATAGATC+CGG - chr6_2:4741231-4741250 Msa0906180:intron 20.0%
!!! ATAATAATAAACTGGACTTT+TGG + chr6_2:4741676-4741695 None:intergenic 20.0%
!!! ATACTAATAATGCTTTTGTA+TGG - chr6_2:4741733-4741752 Msa0906180:intron 20.0%
!!! ATGTTTTAAGGAAAAATACA+CGG + chr6_2:4742938-4742957 None:intergenic 20.0%
!!! AGTGATTTAAAATTAACATG+TGG - chr6_2:4742988-4743007 Msa0906180:CDS 20.0%
!! AAAATACCATTTCAATACTA+AGG - chr6_2:4743222-4743241 Msa0906180:intron 20.0%
!! AAATACCATTTCAATACTAA+GGG - chr6_2:4743223-4743242 Msa0906180:intron 20.0%
!! TGAAAATAAAAAATCTTGGT+TGG - chr6_2:4743375-4743394 Msa0906180:intron 20.0%
!! TGGATATATTAACAGAAATT+GGG - chr6_2:4743398-4743417 Msa0906180:intron 20.0%
!! GTTTCAATAATGAAAAATCA+TGG + chr6_2:4744453-4744472 None:intergenic 20.0%
!!! AAAAGAGAAGCTTTTTCAAA+TGG - chr6_2:4737768-4737787 Msa0906180:CDS 25.0%
!!! AAAGAGAAGCTTTTTCAAAT+GGG - chr6_2:4737769-4737788 Msa0906180:CDS 25.0%
! TTATTAGATGACAGAATACA+TGG - chr6_2:4738020-4738039 Msa0906180:CDS 25.0%
! ATTAGGATATTATAGTGCAT+AGG - chr6_2:4738102-4738121 Msa0906180:intron 25.0%
!!! CAATTATTTTACACTGTCAA+TGG - chr6_2:4738138-4738157 Msa0906180:intron 25.0%
!!! AAGTGAACAGTTGATAAAAT+AGG + chr6_2:4738245-4738264 None:intergenic 25.0%
! TAATTGGTCAAAATTCAAAC+CGG + chr6_2:4738442-4738461 None:intergenic 25.0%
! ATCAAATACTTCTCTCTAAT+TGG + chr6_2:4738458-4738477 None:intergenic 25.0%
!!! TATAAAGTGTTGTCAAATTG+TGG - chr6_2:4738625-4738644 Msa0906180:CDS 25.0%
!! TAAGTGTTGTTATAACTTAG+CGG - chr6_2:4739113-4739132 Msa0906180:CDS 25.0%
! ACTATCAATTATGGAATGTT+TGG - chr6_2:4739315-4739334 Msa0906180:intron 25.0%
! GGGTTTATCTTATGATATAA+AGG - chr6_2:4739350-4739369 Msa0906180:intron 25.0%
! TATGATATAAAGGATGTGTT+TGG - chr6_2:4739360-4739379 Msa0906180:intron 25.0%
! ATGAGCTAAAAACAACTTAT+AGG + chr6_2:4739467-4739486 None:intergenic 25.0%
! TTATGAAAATGATATGCAGA+TGG - chr6_2:4739509-4739528 Msa0906180:intron 25.0%
! ACTATATTTAAACTCTAGCT+AGG + chr6_2:4739694-4739713 None:intergenic 25.0%
!!! AGTTATTTTTTCTGGTATTC+CGG - chr6_2:4739711-4739730 Msa0906180:intron 25.0%
! TGAATTACTTACAAACACAT+GGG + chr6_2:4739901-4739920 None:intergenic 25.0%
! TTGAATTACTTACAAACACA+TGG + chr6_2:4739902-4739921 None:intergenic 25.0%
!!! AAAAAGTGTCACAAATTATG+AGG - chr6_2:4739921-4739940 Msa0906180:intron 25.0%
! CTTTATTAGAGCAAAAGAAT+GGG - chr6_2:4740186-4740205 Msa0906180:intron 25.0%
! TTAATAAACAAACATAGCAC+CGG + chr6_2:4740323-4740342 None:intergenic 25.0%
! AACAAGTTAACACAATTCAA+GGG + chr6_2:4740568-4740587 None:intergenic 25.0%
! AAATTCTATTCAACTGTGTT+AGG - chr6_2:4740631-4740650 Msa0906180:CDS 25.0%
!! ATCTTTTCCATATTTTTCCA+AGG + chr6_2:4741272-4741291 None:intergenic 25.0%
! AATTAAAACACACAACACTT+GGG + chr6_2:4741474-4741493 None:intergenic 25.0%
! AAATTAAAACACACAACACT+TGG + chr6_2:4741475-4741494 None:intergenic 25.0%
!! AATTCTAAGTGTTGTTATCA+AGG + chr6_2:4741912-4741931 None:intergenic 25.0%
! TTAAGAGTAGAATTTGTAGA+GGG + chr6_2:4741983-4742002 None:intergenic 25.0%
! ATTAAGAGTAGAATTTGTAG+AGG + chr6_2:4741984-4742003 None:intergenic 25.0%
!!! TAAAAGTTGTTTTAGTGTCT+AGG - chr6_2:4742330-4742349 Msa0906180:intron 25.0%
! TTTATTGATCAATTGTGTGA+GGG + chr6_2:4742886-4742905 None:intergenic 25.0%
! ATTTATTGATCAATTGTGTG+AGG + chr6_2:4742887-4742906 None:intergenic 25.0%
! ATCAATAAATGTTCTGATCT+TGG - chr6_2:4742897-4742916 Msa0906180:intron 25.0%
!!! TGTTTTAAGGAAAAATACAC+GGG + chr6_2:4742937-4742956 None:intergenic 25.0%
!! CAAACAGATAGAATGTTTTA+AGG + chr6_2:4742950-4742969 None:intergenic 25.0%
! TTAAAATTAACATGTGGATG+TGG - chr6_2:4742994-4743013 Msa0906180:CDS 25.0%
! AATACCATTTCAATACTAAG+GGG - chr6_2:4743224-4743243 Msa0906180:intron 25.0%
! AAATAAAAAATCTTGGTTGG+TGG - chr6_2:4743378-4743397 Msa0906180:intron 25.0%
! GTGGATATATTAACAGAAAT+TGG - chr6_2:4743397-4743416 Msa0906180:intron 25.0%
! GGATATATTAACAGAAATTG+GGG - chr6_2:4743399-4743418 Msa0906180:intron 25.0%
! NNNNNNNNNGAAACTGGAGA+TGG - chr6_2:4743687-4743706 Msa0906180:CDS 25.0%
! TTGGCAAATGTAATAGAAAT+AGG + chr6_2:4743883-4743902 None:intergenic 25.0%
! TACTAAATCAACATGTACAA+GGG + chr6_2:4743982-4744001 None:intergenic 25.0%
! TTACTAAATCAACATGTACA+AGG + chr6_2:4743983-4744002 None:intergenic 25.0%
! TTGATTTAGTAATTTCGCAT+TGG - chr6_2:4743991-4744010 Msa0906180:intron 25.0%
! TAGACTACAGTATACATAAT+GGG + chr6_2:4744107-4744126 None:intergenic 25.0%
! ATAGACTACAGTATACATAA+TGG + chr6_2:4744108-4744127 None:intergenic 25.0%
! AATCGCTAAACTGTTTAAAA+AGG + chr6_2:4744131-4744150 None:intergenic 25.0%
! GATACAAAAATGATCAGAAT+AGG + chr6_2:4744484-4744503 None:intergenic 25.0%
! ATTGTTGAAGTTTAGAAATC+GGG + chr6_2:4744733-4744752 None:intergenic 25.0%
! GATTGTTGAAGTTTAGAAAT+CGG + chr6_2:4744734-4744753 None:intergenic 25.0%
! TCAAACAAAATAACTGCATA+AGG + chr6_2:4745103-4745122 None:intergenic 25.0%
! TTTGTTTGATGAGATTGAAA+AGG - chr6_2:4745114-4745133 Msa0906180:intron 25.0%
!! CAATGTATTCCTTCAAATTT+TGG - chr6_2:4745153-4745172 Msa0906180:intron 25.0%
!! TTGATGAGTATATTGTTTTC+CGG - chr6_2:4745377-4745396 Msa0906180:intron 25.0%
!!! TTTTTCCATTTTAGTTCAAG+TGG + chr6_2:4745586-4745605 None:intergenic 25.0%
! TTTATGTTCTTTACTACAGT+TGG - chr6_2:4745692-4745711 Msa0906180:intron 25.0%
! ATCGTTCTGTTATTATAGAT+TGG - chr6_2:4746101-4746120 Msa0906180:CDS 25.0%
CTTCAATGGAATTGAATTCA+AGG + chr6_2:4737748-4737767 None:intergenic 30.0%
! AAAGCTTCTCTTTTCTTCAA+TGG + chr6_2:4737762-4737781 None:intergenic 30.0%
ACCCTAAACAGTTTATTGTT+CGG - chr6_2:4737811-4737830 Msa0906180:CDS 30.0%
ACCGAACAATAAACTGTTTA+GGG + chr6_2:4737815-4737834 None:intergenic 30.0%
GTTTAATAGATATGCTCTGT+CGG - chr6_2:4737884-4737903 Msa0906180:CDS 30.0%
! AAGAAATAATTGACTCCTAC+TGG + chr6_2:4737934-4737953 None:intergenic 30.0%
TCGAGTCATACTGTTAAATA+GGG - chr6_2:4737956-4737975 Msa0906180:CDS 30.0%
TCATACTGTTAAATAGGGTA+GGG - chr6_2:4737961-4737980 Msa0906180:CDS 30.0%
! GAGTAGCCTATTTTCTTATT+AGG - chr6_2:4738085-4738104 Msa0906180:intron 30.0%
!! CTATTAGATGATGGAATACA+TGG - chr6_2:4738164-4738183 Msa0906180:intron 30.0%
ATGGAATACATGGTTTCTAT+TGG - chr6_2:4738174-4738193 Msa0906180:intron 30.0%
! TTCAAAGTATCTAATGCCAA+TGG + chr6_2:4738300-4738319 None:intergenic 30.0%
TTAATCTCACTGAATCATGT+AGG - chr6_2:4738395-4738414 Msa0906180:CDS 30.0%
CGGTTTCACTTAATTTAAGT+GGG + chr6_2:4738422-4738441 None:intergenic 30.0%
CCACTTAAATTAAGTGAAAC+CGG - chr6_2:4738420-4738439 Msa0906180:CDS 30.0%
AGAGTTTATTGAGAAAAGTG+TGG - chr6_2:4738492-4738511 Msa0906180:CDS 30.0%
! ACAACAAGACTACTATTTCT+AGG + chr6_2:4738546-4738565 None:intergenic 30.0%
TGTTGTCAAATTGTGGTTAT+AGG - chr6_2:4738632-4738651 Msa0906180:CDS 30.0%
! TGTACAGAGTATTAATTGGA+GGG + chr6_2:4738808-4738827 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr6_2:4738942-4738961 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr6_2:4738943-4738962 Msa0906180:CDS 30.0%
CAAATATATGTCCAACACAT+TGG + chr6_2:4738983-4739002 None:intergenic 30.0%
ATCAATGCTTTCTCGATAAA+TGG + chr6_2:4739054-4739073 None:intergenic 30.0%
CAACACTTTATACAAAACTG+TGG + chr6_2:4739158-4739177 None:intergenic 30.0%
!!! TCATTTTAGCTTATCTACTC+AGG - chr6_2:4739400-4739419 Msa0906180:intron 30.0%
!! TGTGTAATAGTGGACTAAAA+AGG + chr6_2:4739650-4739669 None:intergenic 30.0%
AACTAACTAGCTACTAGTAA+TGG + chr6_2:4739744-4739763 None:intergenic 30.0%
AAATACAGCAATAAGTCTCT+TGG - chr6_2:4739869-4739888 Msa0906180:intron 30.0%
TTCAAGCTCATTTCTAATTG+CGG - chr6_2:4739953-4739972 Msa0906180:CDS 30.0%
ATCAGAGTTGTTTGTAATTC+TGG - chr6_2:4739978-4739997 Msa0906180:CDS 30.0%
!! TTAGATTTTGATGCAATGAC+AGG - chr6_2:4740055-4740074 Msa0906180:intron 30.0%
! GCTTTATTAGAGCAAAAGAA+TGG - chr6_2:4740185-4740204 Msa0906180:intron 30.0%
GGAAATAGTAAAATTCAAGC+TGG - chr6_2:4740412-4740431 Msa0906180:intron 30.0%
! ATTTGAGATGAAACTGTCAT+GGG - chr6_2:4740497-4740516 Msa0906180:CDS 30.0%
CAACAAGTTAACACAATTCA+AGG + chr6_2:4740569-4740588 None:intergenic 30.0%
ATATTCTTTCTTGAATTCCC+TGG + chr6_2:4740717-4740736 None:intergenic 30.0%
AGGGAATTCAAGAAAGAATA+TGG - chr6_2:4740716-4740735 Msa0906180:CDS 30.0%
GGGAATTCAAGAAAGAATAT+GGG - chr6_2:4740717-4740736 Msa0906180:CDS 30.0%
GGAATTCAAGAAAGAATATG+GGG - chr6_2:4740718-4740737 Msa0906180:CDS 30.0%
! GAAAATAGTTGTGGTGTTAA+AGG - chr6_2:4741125-4741144 Msa0906180:intron 30.0%
! ATGTGATTGAATTTTCCTTG+AGG - chr6_2:4741158-4741177 Msa0906180:intron 30.0%
!! AAATTTGTTATAGATCCGGA+AGG - chr6_2:4741235-4741254 Msa0906180:intron 30.0%
TATGAAGCCTTGGAAAAATA+TGG - chr6_2:4741262-4741281 Msa0906180:intron 30.0%
AACATGCTGAATAATTAGCA+TGG - chr6_2:4741619-4741638 Msa0906180:CDS 30.0%
GGAAATTAGAACAGTCTAAT+TGG + chr6_2:4741891-4741910 None:intergenic 30.0%
! GATCAATTTTACATCTACTC+TGG + chr6_2:4742088-4742107 None:intergenic 30.0%
GAGTAGATGTAAAATTGATC+AGG - chr6_2:4742088-4742107 Msa0906180:intron 30.0%
TCAGCTTATATCTCTTGATA+TGG - chr6_2:4742123-4742142 Msa0906180:intron 30.0%
CAGCTTATATCTCTTGATAT+GGG - chr6_2:4742124-4742143 Msa0906180:intron 30.0%
TTATTGCTGGAGCAAAATAT+CGG - chr6_2:4742152-4742171 Msa0906180:intron 30.0%
! TTCTGTAACTTCTTTGAGAA+CGG + chr6_2:4742203-4742222 None:intergenic 30.0%
AAAGAAGTTACAGAATCTGA+TGG - chr6_2:4742208-4742227 Msa0906180:intron 30.0%
GATGTTTGCAATAACCTAAT+AGG - chr6_2:4742440-4742459 Msa0906180:CDS 30.0%
! CTCTTATGTAATTTTGAACG+TGG - chr6_2:4742562-4742581 Msa0906180:intron 30.0%
TCCATAAACTTTGAATTGTG+TGG - chr6_2:4742686-4742705 Msa0906180:intron 30.0%
ACCACACAATTCAAAGTTTA+TGG + chr6_2:4742690-4742709 None:intergenic 30.0%
AAACTTTGAATTGTGTGGTT+TGG - chr6_2:4742691-4742710 Msa0906180:intron 30.0%
ATAAATGTTCTGATCTTGGA+TGG - chr6_2:4742901-4742920 Msa0906180:intron 30.0%
CAACAACATTAGATGAGTAT+CGG - chr6_2:4743129-4743148 Msa0906180:intron 30.0%
! GAAATGGTATTTTCAACTGA+AGG + chr6_2:4743215-4743234 None:intergenic 30.0%
TAGTAATTACTACCTTTGTC+GGG + chr6_2:4743353-4743372 None:intergenic 30.0%
CTAGTAATTACTACCTTTGT+CGG + chr6_2:4743354-4743373 None:intergenic 30.0%
TCTTTCGTAATGCTCATAAA+GGG - chr6_2:4743454-4743473 Msa0906180:intron 30.0%
ATAAATCACAGCTATTGATC+TGG - chr6_2:4743494-4743513 Msa0906180:intron 30.0%
! CCTTTAAAAGTTCAGCTATT+TGG + chr6_2:4743929-4743948 None:intergenic 30.0%
! CCAAATAGCTGAACTTTTAA+AGG - chr6_2:4743926-4743945 Msa0906180:intron 30.0%
TTGTATTCAATCCTCTAATC+AGG - chr6_2:4744081-4744100 Msa0906180:intron 30.0%
TATTCATCCTAGTAGTAATC+AGG - chr6_2:4744328-4744347 Msa0906180:intron 30.0%
TTACATGAATATATGAGCTC+TGG - chr6_2:4744638-4744657 Msa0906180:intron 30.0%
AGAGAAGCTGTTATATTTAG+AGG - chr6_2:4744760-4744779 Msa0906180:intron 30.0%
TTCTTCTGTATTGAACATGT+AGG + chr6_2:4744954-4744973 None:intergenic 30.0%
! TTCCTTCAAATTTTGGATGA+TGG - chr6_2:4745160-4745179 Msa0906180:intron 30.0%
! TTTTCATATGCCGAATCTTT+TGG + chr6_2:4745295-4745314 None:intergenic 30.0%
ATCAACTCTATTCATGAACT+CGG + chr6_2:4745362-4745381 None:intergenic 30.0%
! ATCTGACAATGCTACTTATT+TGG + chr6_2:4745417-4745436 None:intergenic 30.0%
TTAGAATGTATCAATCAGTG+AGG + chr6_2:4745455-4745474 None:intergenic 30.0%
GAACATAAAAAGTGAGTCTT+GGG + chr6_2:4745681-4745700 None:intergenic 30.0%
AGAACATAAAAAGTGAGTCT+TGG + chr6_2:4745682-4745701 None:intergenic 30.0%
TATTCTTCGAGGAGAATTTA+AGG - chr6_2:4745872-4745891 Msa0906180:intron 30.0%
AAATGTCTTCATAGAATCTG+TGG + chr6_2:4746029-4746048 None:intergenic 30.0%
AACTTGGCATGAAAGATAAA+AGG + chr6_2:4746061-4746080 None:intergenic 30.0%
TCTCAAAATTCGTGTAAACT+TGG + chr6_2:4746077-4746096 None:intergenic 30.0%
ATTATATGCAAGCTATACAC+AGG + chr6_2:4746136-4746155 None:intergenic 30.0%
!! TCATTTCAAATGCTATTTCC+AGG + chr6_2:4746250-4746269 None:intergenic 30.0%
!! GTTGTTGGGTTTGTTATGTT+CGG + chr6_2:4737488-4737507 None:intergenic 35.0%
TTATTGAGAGTTCGAAACCA+TGG + chr6_2:4737542-4737561 None:intergenic 35.0%
GAAAACTCCGATCAATTATG+CGG + chr6_2:4737590-4737609 None:intergenic 35.0%
ATCATTCTGTTCCAATTTCC+CGG - chr6_2:4737658-4737677 Msa0906180:three_prime_UTR 35.0%
AACCGAAACAATGCTCAATT+GGG - chr6_2:4737681-4737700 Msa0906180:three_prime_UTR 35.0%
GAGGTAAAAGAAGCTTGAAA+CGG + chr6_2:4737708-4737727 None:intergenic 35.0%
GGAATTGAATTCAAGGAAGT+GGG + chr6_2:4737741-4737760 None:intergenic 35.0%
TGGAATTGAATTCAAGGAAG+TGG + chr6_2:4737742-4737761 None:intergenic 35.0%
CACCGAACAATAAACTGTTT+AGG + chr6_2:4737816-4737835 None:intergenic 35.0%
! ATTTTACACTGTCATCCAGT+AGG - chr6_2:4737916-4737935 Msa0906180:CDS 35.0%
CTCGAGTCATACTGTTAAAT+AGG - chr6_2:4737955-4737974 Msa0906180:CDS 35.0%
GTCATACTGTTAAATAGGGT+AGG - chr6_2:4737960-4737979 Msa0906180:CDS 35.0%
!! AAGTGATTTGGTGGAATACA+TGG - chr6_2:4737991-4738010 Msa0906180:CDS 35.0%
!! AAACACACTCTTTAGAGTCT+AGG - chr6_2:4738333-4738352 Msa0906180:intron 35.0%
! CCAATTTAGAAAGTGTGTAG+AGG + chr6_2:4738366-4738385 None:intergenic 35.0%
CCTCTACACACTTTCTAAAT+TGG - chr6_2:4738363-4738382 Msa0906180:CDS 35.0%
CCGGTTTCACTTAATTTAAG+TGG + chr6_2:4738423-4738442 None:intergenic 35.0%
!! ACAAGACTACTATTTCTAGG+TGG + chr6_2:4738543-4738562 None:intergenic 35.0%
GTTTGTTCAAATTTCGCTAC+AGG + chr6_2:4738674-4738693 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr6_2:4738708-4738727 None:intergenic 35.0%
ATTGCATTGGAAACTGAAAG+TGG + chr6_2:4738761-4738780 None:intergenic 35.0%
! GTGTACAGAGTATTAATTGG+AGG + chr6_2:4738809-4738828 None:intergenic 35.0%
! GGAGTGTACAGAGTATTAAT+TGG + chr6_2:4738812-4738831 None:intergenic 35.0%
! GAGTATTTTCTCCAATGTGT+TGG - chr6_2:4738969-4738988 Msa0906180:CDS 35.0%
!! AAGCATTGATACTAGACACT+TGG - chr6_2:4739064-4739083 Msa0906180:CDS 35.0%
TTATACAAAACTGTGGTGAG+TGG + chr6_2:4739151-4739170 None:intergenic 35.0%
! ATTTTCCAGCAATCTGTGTT+GGG - chr6_2:4739238-4739257 Msa0906180:CDS 35.0%
AATGTTTGGAAGAGCTTGTA+TGG - chr6_2:4739329-4739348 Msa0906180:intron 35.0%
ATGTTTGGAAGAGCTTGTAT+GGG - chr6_2:4739330-4739349 Msa0906180:intron 35.0%
! TACTAGTAATGGTGGAATAC+CGG + chr6_2:4739733-4739752 None:intergenic 35.0%
TAACTAGCTACTAGTAATGG+TGG + chr6_2:4739741-4739760 None:intergenic 35.0%
TACTAGTAGCTAGTTAGTTG+AGG - chr6_2:4739745-4739764 Msa0906180:intron 35.0%
! TTTGTGATACTGATTGTGTC+TGG - chr6_2:4740004-4740023 Msa0906180:CDS 35.0%
ACAGCAAGAATTCACAGAAA+TGG - chr6_2:4740082-4740101 Msa0906180:intron 35.0%
! CATTTGAGATGAAACTGTCA+TGG - chr6_2:4740496-4740515 Msa0906180:CDS 35.0%
ATTCAACTGTGTTAGGTTCT+AGG - chr6_2:4740638-4740657 Msa0906180:CDS 35.0%
TTCAACTGTGTTAGGTTCTA+GGG - chr6_2:4740639-4740658 Msa0906180:CDS 35.0%
ATTTGTATCAGTTGAGCACT+TGG - chr6_2:4740745-4740764 Msa0906180:intron 35.0%
AAACTGCTATAGAGTCTGTA+AGG - chr6_2:4740843-4740862 Msa0906180:intron 35.0%
AACTGCTATAGAGTCTGTAA+GGG - chr6_2:4740844-4740863 Msa0906180:intron 35.0%
! AATAGTTGTGGTGTTAAAGG+AGG - chr6_2:4741128-4741147 Msa0906180:intron 35.0%
ACAGCTTCTAATATACCTCA+AGG + chr6_2:4741176-4741195 None:intergenic 35.0%
! AAGGCTTCATATTTTCCTTC+CGG + chr6_2:4741253-4741272 None:intergenic 35.0%
TGGAAAAGATTTGACAGCAA+TGG - chr6_2:4741282-4741301 Msa0906180:intron 35.0%
AAGAACAATCCTGTGCTAAT+TGG - chr6_2:4741385-4741404 Msa0906180:intron 35.0%
!! GAAAGACTGCTATTTCTGAA+GGG - chr6_2:4741422-4741441 Msa0906180:intron 35.0%
! ATTTCTGAAGGGTAAGTTCT+TGG - chr6_2:4741433-4741452 Msa0906180:intron 35.0%
!!! AGAATTGTTTTAGCATGAGC+TGG - chr6_2:4741706-4741725 Msa0906180:intron 35.0%
! ATGCTTTTGTATGGATGCTT+AGG - chr6_2:4741742-4741761 Msa0906180:intron 35.0%
TTCGATTCATCAAAGCTTGA+GGG + chr6_2:4741853-4741872 None:intergenic 35.0%
! TCAAGCTTTGATGAATCGAA+GGG - chr6_2:4741853-4741872 Msa0906180:intron 35.0%
TATTGCTGGAGCAAAATATC+GGG - chr6_2:4742153-4742172 Msa0906180:intron 35.0%
AAAATATCGGGGAGAATTTG+AGG - chr6_2:4742165-4742184 Msa0906180:intron 35.0%
ATGAGATCCATACAGTTGTT+GGG - chr6_2:4742251-4742270 Msa0906180:intron 35.0%
CGTGTAGTTAAGAGAAATTG+AGG + chr6_2:4742371-4742390 None:intergenic 35.0%
! TTTGTAACCTCGTTTTCACT+GGG + chr6_2:4742397-4742416 None:intergenic 35.0%
! ATTTGTAACCTCGTTTTCAC+TGG + chr6_2:4742398-4742417 None:intergenic 35.0%
TATTGCAAACATCGATGTGT+CGG + chr6_2:4742433-4742452 None:intergenic 35.0%
! ACTTGCATCATTAGCCTATT+AGG + chr6_2:4742457-4742476 None:intergenic 35.0%
! TACACAAAAAAAGGCATGAC+AGG + chr6_2:4742618-4742637 None:intergenic 35.0%
CTCAGCACATACACAAAAAA+AGG + chr6_2:4742627-4742646 None:intergenic 35.0%
ACATGTCTACTAGTTGAGTT+TGG - chr6_2:4742823-4742842 Msa0906180:intron 35.0%
ACTCTAATCTATCCTATGCT+AGG - chr6_2:4743029-4743048 Msa0906180:CDS 35.0%
! GTATCGGAAGTATATTGAGA+AGG - chr6_2:4743145-4743164 Msa0906180:intron 35.0%
! TGGTATTTTCAACTGAAGGT+TGG + chr6_2:4743211-4743230 None:intergenic 35.0%
GAAAGATATGAGTTGCATCA+TGG - chr6_2:4743254-4743273 Msa0906180:intron 35.0%
TCTCAGATCGATACATAAGT+GGG - chr6_2:4743318-4743337 Msa0906180:intron 35.0%
CAGAAATTGGGGAATTTCAT+AGG - chr6_2:4743410-4743429 Msa0906180:intron 35.0%
CTCTTTCGTAATGCTCATAA+AGG - chr6_2:4743453-4743472 Msa0906180:intron 35.0%
TTAATCTCATCAAGTGCAGT+GGG + chr6_2:4743564-4743583 None:intergenic 35.0%
ATTAATCTCATCAAGTGCAG+TGG + chr6_2:4743565-4743584 None:intergenic 35.0%
CTGCACTTGATGAGATTAAT+AGG - chr6_2:4743565-4743584 Msa0906180:CDS 35.0%
TCTTCAGTCAATCAAAGAAG+AGG - chr6_2:4743849-4743868 Msa0906180:intron 35.0%
GCTCTGATAACATGTAGAAT+TGG + chr6_2:4744196-4744215 None:intergenic 35.0%
! ATTCCTAGCTTTCACTAAGT+TGG + chr6_2:4744246-4744265 None:intergenic 35.0%
AACTTAGTGAAAGCTAGGAA+TGG - chr6_2:4744245-4744264 Msa0906180:intron 35.0%
GATCATCATTTCCAGTTTGA+GGG - chr6_2:4744267-4744286 Msa0906180:intron 35.0%
ATCATCATTTCCAGTTTGAG+GGG - chr6_2:4744268-4744287 Msa0906180:intron 35.0%
ATTTAGATCATACTCTCGCT+CGG + chr6_2:4744549-4744568 None:intergenic 35.0%
GAAGTAACTGGGAATGATAT+TGG - chr6_2:4744680-4744699 Msa0906180:intron 35.0%
ATTGAACATGTAGGAAGCAA+GGG + chr6_2:4744945-4744964 None:intergenic 35.0%
TATTGAACATGTAGGAAGCA+AGG + chr6_2:4744946-4744965 None:intergenic 35.0%
!! ATACAGAAGAAGCACTTGTT+CGG - chr6_2:4744963-4744982 Msa0906180:intron 35.0%
GATTGATATGAGTGAGTACA+TGG - chr6_2:4744985-4745004 Msa0906180:intron 35.0%
! TGAGTACATGGAAAAGCATA+CGG - chr6_2:4744997-4745016 Msa0906180:intron 35.0%
CATACGGTTTCAAGATTGAT+CGG - chr6_2:4745013-4745032 Msa0906180:intron 35.0%
TGCCATCATCCAAAATTTGA+AGG + chr6_2:4745165-4745184 None:intergenic 35.0%
! TGTTGGTAAAACTTACTGTG+CGG + chr6_2:4745207-4745226 None:intergenic 35.0%
ATCATCATGACCTCAAATGT+GGG - chr6_2:4745232-4745251 Msa0906180:intron 35.0%
ATCACAGTACATTCTCAACA+CGG - chr6_2:4745255-4745274 Msa0906180:intron 35.0%
TCAACTCTATTCATGAACTC+GGG + chr6_2:4745361-4745380 None:intergenic 35.0%
! CAATGCTACTTATTTGGTCA+CGG + chr6_2:4745411-4745430 None:intergenic 35.0%
! GTATGCCACTTGAACTAAAA+TGG - chr6_2:4745578-4745597 Msa0906180:intron 35.0%
! TTACTCGGATTTTCATCTTG+CGG + chr6_2:4745743-4745762 None:intergenic 35.0%
ATCCAACTTCTTGGAAGTTT+AGG - chr6_2:4745774-4745793 Msa0906180:intron 35.0%
AACCTAAACTTCCAAGAAGT+TGG + chr6_2:4745779-4745798 None:intergenic 35.0%
TTAGGTTACGATCCAAACTA+TGG - chr6_2:4745792-4745811 Msa0906180:intron 35.0%
TGTGGAAAATGAACTTGCAA+AGG - chr6_2:4745848-4745867 Msa0906180:intron 35.0%
GTGGAAAATGAACTTGCAAA+GGG - chr6_2:4745849-4745868 Msa0906180:intron 35.0%
!!! CTAAAAACTAGCTTTTGCTG+AGG + chr6_2:4745954-4745973 None:intergenic 35.0%
!!! CTCAGCAAAAGCTAGTTTTT+AGG - chr6_2:4745952-4745971 Msa0906180:CDS 35.0%
!!! AGCAAAAGCTAGTTTTTAGG+AGG - chr6_2:4745955-4745974 Msa0906180:CDS 35.0%
!!! GCAAAAGCTAGTTTTTAGGA+GGG - chr6_2:4745956-4745975 Msa0906180:CDS 35.0%
ACATAACAAACCCAACAACG+TGG - chr6_2:4737489-4737508 Msa0906180:three_prime_UTR 40.0%
TGAAATGTGACCACGTTGTT+GGG + chr6_2:4737502-4737521 None:intergenic 40.0%
TTGAAATGTGACCACGTTGT+TGG + chr6_2:4737503-4737522 None:intergenic 40.0%
ACAAACACTTCACTTCACCA+TGG - chr6_2:4737522-4737541 Msa0906180:three_prime_UTR 40.0%
! ATTGAGCATTGTTTCGGTTC+CGG + chr6_2:4737680-4737699 None:intergenic 40.0%
GAACCGAAACAATGCTCAAT+TGG - chr6_2:4737680-4737699 Msa0906180:three_prime_UTR 40.0%
! GACCCAATTGAGCATTGTTT+CGG + chr6_2:4737686-4737705 None:intergenic 40.0%
TAGGGTGTAGTGAAGTGATT+TGG - chr6_2:4737979-4737998 Msa0906180:CDS 40.0%
CAATGGCTGCTATTAGATGA+TGG - chr6_2:4738155-4738174 Msa0906180:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr6_2:4738947-4738966 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr6_2:4738947-4738966 Msa0906180:CDS 40.0%
GCTATAGCATTGTAGTGTAG+TGG - chr6_2:4739198-4739217 Msa0906180:CDS 40.0%
! GATTTTCCAGCAATCTGTGT+TGG - chr6_2:4739237-4739256 Msa0906180:CDS 40.0%
! TGATACTGATTGTGTCTGGT+TGG - chr6_2:4740008-4740027 Msa0906180:CDS 40.0%
AAGAATTCACAGAAATGGCG+TGG - chr6_2:4740087-4740106 Msa0906180:intron 40.0%
GGAGAACAAGCATCAAATTG+TGG - chr6_2:4740142-4740161 Msa0906180:intron 40.0%
GTCGAATCTTTACCAAGGTT+GGG - chr6_2:4740216-4740235 Msa0906180:CDS 40.0%
TCGAATCTTTACCAAGGTTG+GGG - chr6_2:4740217-4740236 Msa0906180:CDS 40.0%
!! TTGACTTGGTTGATCACCTT+GGG + chr6_2:4740293-4740312 None:intergenic 40.0%
!! TTTGACTTGGTTGATCACCT+TGG + chr6_2:4740294-4740313 None:intergenic 40.0%
CAACCAAGTCAAATATGCTC+CGG - chr6_2:4740301-4740320 Msa0906180:intron 40.0%
GATGGTAGAAGTGAAGTTTG+AGG - chr6_2:4740391-4740410 Msa0906180:intron 40.0%
ATCTTCGCATAACGTGGTTA+TGG - chr6_2:4740520-4740539 Msa0906180:CDS 40.0%
!! AGTTTTGTGAGCTGCAGATA+TGG + chr6_2:4740605-4740624 None:intergenic 40.0%
! TCAACTGTGTTAGGTTCTAG+GGG - chr6_2:4740640-4740659 Msa0906180:CDS 40.0%
ACTGCTATAGAGTCTGTAAG+GGG - chr6_2:4740845-4740864 Msa0906180:intron 40.0%
AATAGAAGAAGCAGGCAGAT+GGG + chr6_2:4740950-4740969 None:intergenic 40.0%
TGAAACGCAATAGAAGAAGC+AGG + chr6_2:4740958-4740977 None:intergenic 40.0%
GGAAGGAAAATATGAAGCCT+TGG - chr6_2:4741252-4741271 Msa0906180:intron 40.0%
CATCATCTCTTCCTATGACA+GGG + chr6_2:4741327-4741346 None:intergenic 40.0%
TCATCATCTCTTCCTATGAC+AGG + chr6_2:4741328-4741347 None:intergenic 40.0%
GAAGAGATGATGAAATACGC+AGG - chr6_2:4741335-4741354 Msa0906180:intron 40.0%
AGGATTGTTCTTTGTTCTCC+TGG + chr6_2:4741377-4741396 None:intergenic 40.0%
!! GGAAAGACTGCTATTTCTGA+AGG - chr6_2:4741421-4741440 Msa0906180:intron 40.0%
AAAACACACAACACTTGGGA+GGG + chr6_2:4741470-4741489 None:intergenic 40.0%
TAAAACACACAACACTTGGG+AGG + chr6_2:4741471-4741490 None:intergenic 40.0%
!!! TTGTTTTAGCATGAGCTGGT+TGG - chr6_2:4741710-4741729 Msa0906180:intron 40.0%
! ACTCTGCCTTTTACACAGAT+TGG - chr6_2:4741802-4741821 Msa0906180:intron 40.0%
TCTGAGCCAATCTGTGTAAA+AGG + chr6_2:4741811-4741830 None:intergenic 40.0%
TTGGCTCAGAGAATTGTTCA+AGG - chr6_2:4741821-4741840 Msa0906180:intron 40.0%
CTTCGATTCATCAAAGCTTG+AGG + chr6_2:4741854-4741873 None:intergenic 40.0%
! CTCAAGCTTTGATGAATCGA+AGG - chr6_2:4741852-4741871 Msa0906180:intron 40.0%
ATTGCTGGAGCAAAATATCG+GGG - chr6_2:4742154-4742173 Msa0906180:intron 40.0%
GATGAGATCCATACAGTTGT+TGG - chr6_2:4742250-4742269 Msa0906180:intron 40.0%
TGAGATCCATACAGTTGTTG+GGG - chr6_2:4742252-4742271 Msa0906180:intron 40.0%
!! GTTTTAGTGTCTAGGACTCT+AGG - chr6_2:4742338-4742357 Msa0906180:intron 40.0%
AACTCGAGTCTGTAAACTCA+TGG + chr6_2:4742854-4742873 None:intergenic 40.0%
AACCTCTTAAAGCCTATGCT+TGG - chr6_2:4743080-4743099 Msa0906180:CDS 40.0%
! CAGACCCCTTAGTATTGAAA+TGG + chr6_2:4743231-4743250 None:intergenic 40.0%
TTTCAATACTAAGGGGTCTG+CGG - chr6_2:4743231-4743250 Msa0906180:intron 40.0%
CTCTCAGATCGATACATAAG+TGG - chr6_2:4743317-4743336 Msa0906180:intron 40.0%
AGCAGCTGCTAAACTGAAAA+TGG - chr6_2:4743524-4743543 Msa0906180:CDS 40.0%
TCTCATGAATGACACAGACA+AGG - chr6_2:4743720-4743739 Msa0906180:intron 40.0%
TCTCTCCTAAAAGGGAAACA+GGG - chr6_2:4743781-4743800 Msa0906180:intron 40.0%
! CTTTTCATGTTCCCATTGCT+CGG + chr6_2:4743815-4743834 None:intergenic 40.0%
!! TACATAATGGGCCTGATTAG+AGG + chr6_2:4744095-4744114 None:intergenic 40.0%
AATCAAGGCACAGTAAAACC+AGG + chr6_2:4744220-4744239 None:intergenic 40.0%
! TCACTAAGTTGGCTGAATCA+AGG + chr6_2:4744235-4744254 None:intergenic 40.0%
GGATCATCATTTCCAGTTTG+AGG - chr6_2:4744266-4744285 Msa0906180:intron 40.0%
TCATCATTTCCAGTTTGAGG+GGG - chr6_2:4744269-4744288 Msa0906180:intron 40.0%
! TAATGGGCCTGATTACTACT+AGG + chr6_2:4744338-4744357 None:intergenic 40.0%
TAGTAGTAATCAGGCCCATT+AGG - chr6_2:4744337-4744356 Msa0906180:intron 40.0%
TCATGGTTGCTGTAGAATTG+AGG + chr6_2:4744436-4744455 None:intergenic 40.0%
AGTAAACCTTGAGATCCTAC+AGG - chr6_2:4744523-4744542 Msa0906180:intron 40.0%
! CGTGCTGCTGAATTAAAGTA+CGG - chr6_2:4744569-4744588 Msa0906180:intron 40.0%
TGGTAAGTCTATGTTGAGAG+AGG - chr6_2:4744658-4744677 Msa0906180:intron 40.0%
ATGTTGAGAGAGGAAGTAAC+TGG - chr6_2:4744668-4744687 Msa0906180:intron 40.0%
TGTTGAGAGAGGAAGTAACT+GGG - chr6_2:4744669-4744688 Msa0906180:intron 40.0%
ATGAACATGAAGCTAGCGAT+TGG + chr6_2:4744884-4744903 None:intergenic 40.0%
! AATCGCTAGCTTCATGTTCA+TGG - chr6_2:4744883-4744902 Msa0906180:intron 40.0%
! ATCGCTAGCTTCATGTTCAT+GGG - chr6_2:4744884-4744903 Msa0906180:intron 40.0%
TAACTGCATAAGGTCTTCGA+CGG + chr6_2:4745093-4745112 None:intergenic 40.0%
! TGAGATTGAAAAGGCACACT+CGG - chr6_2:4745123-4745142 Msa0906180:intron 40.0%
CATCATCATGACCTCAAATG+TGG - chr6_2:4745231-4745250 Msa0906180:intron 40.0%
AAACATGAAGCAGCGTGTAA+TGG - chr6_2:4745312-4745331 Msa0906180:intron 40.0%
CAACTCTATTCATGAACTCG+GGG + chr6_2:4745360-4745379 None:intergenic 40.0%
AAGTAGCATTGTCAGATTGC+AGG - chr6_2:4745420-4745439 Msa0906180:intron 40.0%
GCGAGTGATTCAACAAAATG+TGG - chr6_2:4745830-4745849 Msa0906180:intron 40.0%
TCGAGGAGAATTTAAGGAAG+AGG - chr6_2:4745878-4745897 Msa0906180:intron 40.0%
AATCTACTGCTAAAGACAGC+AGG - chr6_2:4745994-4746013 Msa0906180:CDS 40.0%
ATCTACTGCTAAAGACAGCA+GGG - chr6_2:4745995-4746014 Msa0906180:CDS 40.0%
CTCATCGCCGCATAATTGAT+CGG - chr6_2:4737580-4737599 Msa0906180:three_prime_UTR 45.0%
! GAGTTTTCATTCTCCGACGA+TGG - chr6_2:4737602-4737621 Msa0906180:three_prime_UTR 45.0%
TTGTTTCGGTTCCGGGAAAT+TGG + chr6_2:4737672-4737691 None:intergenic 45.0%
! TTGAGCATTGTTTCGGTTCC+GGG + chr6_2:4737679-4737698 None:intergenic 45.0%
! GGAAGTGGGTTTCAATTGAG+AGG + chr6_2:4737727-4737746 None:intergenic 45.0%
GTGTGCAGATTCAAGTGGAA+AGG - chr6_2:4737833-4737852 Msa0906180:CDS 45.0%
! GGTGTAGTGAAGTGATTTGG+TGG - chr6_2:4737982-4738001 Msa0906180:CDS 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr6_2:4738946-4738965 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr6_2:4738946-4738965 Msa0906180:CDS 45.0%
AAAAAGGACAGACACAGCAC+AGG + chr6_2:4739634-4739653 None:intergenic 45.0%
! TTGTTCTCCTTTGCCACTTC+GGG + chr6_2:4740131-4740150 None:intergenic 45.0%
! CTTGTTCTCCTTTGCCACTT+CGG + chr6_2:4740132-4740151 None:intergenic 45.0%
TGCACGTCGAATCTTTACCA+AGG - chr6_2:4740211-4740230 Msa0906180:CDS 45.0%
CGTCGAATCTTTACCAAGGT+TGG - chr6_2:4740215-4740234 Msa0906180:CDS 45.0%
GACAACACAGAAGCTTGGTA+AGG - chr6_2:4740434-4740453 Msa0906180:CDS 45.0%
! GAATCAGCCGGTTCAATGTT+GGG - chr6_2:4740662-4740681 Msa0906180:CDS 45.0%
! AATCAGCCGGTTCAATGTTG+GGG - chr6_2:4740663-4740682 Msa0906180:CDS 45.0%
TTCAATGTTGGGGCGTGATT+TGG - chr6_2:4740673-4740692 Msa0906180:CDS 45.0%
! TCAGTTGAGCACTTGGTTCT+TGG - chr6_2:4740752-4740771 Msa0906180:intron 45.0%
TTTGCCCAAGATCGACGATT+TGG - chr6_2:4740776-4740795 Msa0906180:intron 45.0%
TTGCCCAAGATCGACGATTT+GGG - chr6_2:4740777-4740796 Msa0906180:intron 45.0%
CTTCCCAAATCGTCGATCTT+GGG + chr6_2:4740783-4740802 None:intergenic 45.0%
TCTTCCCAAATCGTCGATCT+TGG + chr6_2:4740784-4740803 None:intergenic 45.0%
GACCTTGATCGATAACTGAC+TGG + chr6_2:4740874-4740893 None:intergenic 45.0%
CAATAGAAGAAGCAGGCAGA+TGG + chr6_2:4740951-4740970 None:intergenic 45.0%
GGTGCATTCAAATTCTCTCC+AGG - chr6_2:4741356-4741375 Msa0906180:intron 45.0%
ATAGCAGTCTTTCCAACACC+AGG + chr6_2:4741415-4741434 None:intergenic 45.0%
GCATGTTGAGTCAAGTGATG+TGG - chr6_2:4741583-4741602 Msa0906180:CDS 45.0%
TCTGTGTAAAAGGCAGAGTC+AGG + chr6_2:4741801-4741820 None:intergenic 45.0%
CATCTACTCTGGCTAAGACA+CGG + chr6_2:4742077-4742096 None:intergenic 45.0%
GATATGGGTGCACTTATTGC+TGG - chr6_2:4742139-4742158 Msa0906180:intron 45.0%
ATCGGGGAGAATTTGAGGAT+CGG - chr6_2:4742170-4742189 Msa0906180:intron 45.0%
! GTGTCTAGGACTCTAGGTAA+CGG - chr6_2:4742344-4742363 Msa0906180:intron 45.0%
GATGCAAGTGAATCCCATCT+CGG - chr6_2:4742468-4742487 Msa0906180:CDS 45.0%
TACGACTATGAATCCCTCGT+TGG + chr6_2:4742532-4742551 None:intergenic 45.0%
GATCAATTGTGTGAGGGCAA+GGG + chr6_2:4742880-4742899 None:intergenic 45.0%
TGATCAATTGTGTGAGGGCA+AGG + chr6_2:4742881-4742900 None:intergenic 45.0%
!! GACCAAGCATAGGCTTTAAG+AGG + chr6_2:4743085-4743104 None:intergenic 45.0%
TTAAAGCCTATGCTTGGTCG+AGG - chr6_2:4743086-4743105 Msa0906180:CDS 45.0%
TAAAGCCTATGCTTGGTCGA+GGG - chr6_2:4743087-4743106 Msa0906180:CDS 45.0%
TTCAATACTAAGGGGTCTGC+GGG - chr6_2:4743232-4743251 Msa0906180:intron 45.0%
CATTTCTGACACTGCACTTG+TGG - chr6_2:4743283-4743302 Msa0906180:intron 45.0%
! CAGACAAGGCTTCTAGAGAT+AGG - chr6_2:4743734-4743753 Msa0906180:intron 45.0%
ACAGAGCTCTCTCTCCTAAA+AGG - chr6_2:4743772-4743791 Msa0906180:intron 45.0%
CAGAGCTCTCTCTCCTAAAA+GGG - chr6_2:4743773-4743792 Msa0906180:intron 45.0%
CTCTCTCCTAAAAGGGAAAC+AGG - chr6_2:4743780-4743799 Msa0906180:intron 45.0%
CTACATGTTATCAGAGCTCC+TGG - chr6_2:4744199-4744218 Msa0906180:intron 45.0%
CAGCCAACTTAGTGAAAGCT+AGG - chr6_2:4744240-4744259 Msa0906180:intron 45.0%
TATAACACTCCCCCTCAAAC+TGG + chr6_2:4744281-4744300 None:intergenic 45.0%
TTCTTTGCAACGACAACTCG+AGG - chr6_2:4744601-4744620 Msa0906180:intron 45.0%
TCTTTGCAACGACAACTCGA+GGG - chr6_2:4744602-4744621 Msa0906180:intron 45.0%
TTGGTGAAATTGTGAGCCAG+TGG - chr6_2:4744699-4744718 Msa0906180:intron 45.0%
GAACTCCATAAGCGTGTTGT+AGG - chr6_2:4744785-4744804 Msa0906180:intron 45.0%
CTTGACCTACAACACGCTTA+TGG + chr6_2:4744793-4744812 None:intergenic 45.0%
ATAGACCTGCTCTTGAACGT+TGG + chr6_2:4744847-4744866 None:intergenic 45.0%
TCTTCGTATCCAACGTATCC+AGG + chr6_2:4745046-4745065 None:intergenic 45.0%
TGGATACGTTGGATACGAAG+AGG - chr6_2:4745045-4745064 Msa0906180:intron 45.0%
GGATACGTTGGATACGAAGA+GGG - chr6_2:4745046-4745065 Msa0906180:intron 45.0%
! GGTCATGATGATGACAGTGT+TGG + chr6_2:4745224-4745243 None:intergenic 45.0%
GTACTGTGATCCCACATTTG+AGG + chr6_2:4745245-4745264 None:intergenic 45.0%
TGACACTGCGCCAAAAGATT+CGG - chr6_2:4745282-4745301 Msa0906180:intron 45.0%
CTTATTTGGTCACGGTCAAG+AGG + chr6_2:4745403-4745422 None:intergenic 45.0%
CTTCCAAGAAGTTGGATAGC+AGG + chr6_2:4745771-4745790 None:intergenic 45.0%
ACGATCCAAACTATGGTGCT+AGG - chr6_2:4745799-4745818 Msa0906180:intron 45.0%
TGTTGAATCACTCGCTTCAC+CGG + chr6_2:4745825-4745844 None:intergenic 45.0%
!! CTTGCAAAGGGTATTCTTCG+AGG - chr6_2:4745861-4745880 Msa0906180:intron 45.0%
GAAGTCACAATACTCGCCAA+TGG - chr6_2:4745921-4745940 Msa0906180:intron 45.0%
!!! TTTGAAATTTAAATTTAAAT+TGG - chr6_2:4741103-4741122 Msa0906180:intron 5.0%
!! AAAAAAAAATAATAATAAAC+TGG + chr6_2:4741684-4741703 None:intergenic 5.0%
!! TCATAAATATAAATATTAAA+CGG + chr6_2:4745506-4745525 None:intergenic 5.0%
!! TTAATATTTATATTTATGAT+AGG - chr6_2:4745507-4745526 Msa0906180:intron 5.0%
!! TAATATTTATATTTATGATA+GGG - chr6_2:4745508-4745527 Msa0906180:intron 5.0%
!! GTTCGGTGTGCAGATTCAAG+TGG - chr6_2:4737828-4737847 Msa0906180:CDS 50.0%
TTGTGCCCAACACAGATTGC+TGG + chr6_2:4739246-4739265 None:intergenic 50.0%
! TTGGCGCTGAATGTGCTTGT+CGG + chr6_2:4740270-4740289 None:intergenic 50.0%
CTTGGTTGATCACCTTGGGT+TGG + chr6_2:4740289-4740308 None:intergenic 50.0%
GCACCGGAGCATATTTGACT+TGG + chr6_2:4740307-4740326 None:intergenic 50.0%
AGCTGGACAACACAGAAGCT+TGG - chr6_2:4740429-4740448 Msa0906180:intron 50.0%
CATGGGATCTTCGCATAACG+TGG - chr6_2:4740514-4740533 Msa0906180:CDS 50.0%
!! TAGGTTCTAGGGGAATCAGC+CGG - chr6_2:4740650-4740669 Msa0906180:CDS 50.0%
! GGAATCAGCCGGTTCAATGT+TGG - chr6_2:4740661-4740680 Msa0906180:CDS 50.0%
ATCACGCCCCAACATTGAAC+CGG + chr6_2:4740672-4740691 None:intergenic 50.0%
! AATGTTGGGGCGTGATTTGG+AGG - chr6_2:4740676-4740695 Msa0906180:CDS 50.0%
!! AGGCATTGATTCAGAGAGCC+AGG - chr6_2:4740696-4740715 Msa0906180:CDS 50.0%
!! GGCATTGATTCAGAGAGCCA+GGG - chr6_2:4740697-4740716 Msa0906180:CDS 50.0%
CGCCAGTCAGTTATCGATCA+AGG - chr6_2:4740869-4740888 Msa0906180:intron 50.0%
TTGACAGCAATGGCCAAAGC+AGG - chr6_2:4741292-4741311 Msa0906180:intron 50.0%
TGACAGCAATGGCCAAAGCA+GGG - chr6_2:4741293-4741312 Msa0906180:intron 50.0%
AGGGTCAAGTTTCCCTGCTT+TGG + chr6_2:4741308-4741327 None:intergenic 50.0%
GGGAAACTTGACCCTGTCAT+AGG - chr6_2:4741313-4741332 Msa0906180:intron 50.0%
CTAATTGGTGAGCCTGGTGT+TGG - chr6_2:4741400-4741419 Msa0906180:intron 50.0%
GGCTAAGACACGGCTCAAAA+AGG + chr6_2:4742067-4742086 None:intergenic 50.0%
ATCCATACAGTTGTTGGGGC+AGG - chr6_2:4742256-4742275 Msa0906180:intron 50.0%
TACCTGCCCCAACAACTGTA+TGG + chr6_2:4742261-4742280 None:intergenic 50.0%
GGTTTCAGCTCATCCGAGAT+GGG + chr6_2:4742484-4742503 None:intergenic 50.0%
AGGTTTCAGCTCATCCGAGA+TGG + chr6_2:4742485-4742504 None:intergenic 50.0%
TATGAATCCCTCGTTGGAGC+TGG + chr6_2:4742526-4742545 None:intergenic 50.0%
CAAATCACGACTCACGAGCT+AGG + chr6_2:4742658-4742677 None:intergenic 50.0%
CCATTCGTAGCACCTAGCAT+AGG + chr6_2:4743044-4743063 None:intergenic 50.0%
! CCTATGCTAGGTGCTACGAA+TGG - chr6_2:4743041-4743060 Msa0906180:CDS 50.0%
! AGGTGCTACGAATGGTGCTA+TGG - chr6_2:4743049-4743068 Msa0906180:CDS 50.0%
!! ACGAATGGTGCTATGGATGC+TGG - chr6_2:4743056-4743075 Msa0906180:CDS 50.0%
AAAGCCTATGCTTGGTCGAG+GGG - chr6_2:4743088-4743107 Msa0906180:CDS 50.0%
TGAAAACGACGTTCTAGCGC+AGG + chr6_2:4743173-4743192 None:intergenic 50.0%
!! GCTAGAACGTCGTTTTCAGC+AGG - chr6_2:4743175-4743194 Msa0906180:intron 50.0%
! GGGAGATTTTTGCCCGACAA+AGG - chr6_2:4743338-4743357 Msa0906180:intron 50.0%
GAGAGAGCTCTGTCTCAAGA+CGG + chr6_2:4743765-4743784 None:intergenic 50.0%
GAAATTGTGAGCCAGTGGAC+TGG - chr6_2:4744704-4744723 Msa0906180:intron 50.0%
AAATCGGGATACCAGTCCAC+TGG + chr6_2:4744718-4744737 None:intergenic 50.0%
AGGTCAAGATCCTGCTGTCA+AGG - chr6_2:4744805-4744824 Msa0906180:intron 50.0%
TCTTGAACGTTGGATCGCCT+CGG + chr6_2:4744837-4744856 None:intergenic 50.0%
AAGCTAGCGATTGGACGATG+AGG + chr6_2:4744875-4744894 None:intergenic 50.0%
TCGTATCCAACGTATCCAGG+AGG + chr6_2:4745043-4745062 None:intergenic 50.0%
TACGTTGGATACGAAGAGGG+AGG - chr6_2:4745049-4745068 Msa0906180:intron 50.0%
ACGTTGGATACGAAGAGGGA+GGG - chr6_2:4745050-4745069 Msa0906180:intron 50.0%
! GGCAGAGTAACCGATTCACA+AGG - chr6_2:4745181-4745200 Msa0906180:intron 50.0%
! TACTGTGCGGCCTTGTGAAT+CGG + chr6_2:4745194-4745213 None:intergenic 50.0%
CATGAACTCGGGGCGAAAAA+TGG + chr6_2:4745350-4745369 None:intergenic 50.0%
GGATAGCAGGCTCTGTTACT+CGG + chr6_2:4745758-4745777 None:intergenic 50.0%
GAGCCTGCTATCCAACTTCT+TGG - chr6_2:4745765-4745784 Msa0906180:intron 50.0%
! TCCAAACTATGGTGCTAGGC+CGG - chr6_2:4745803-4745822 Msa0906180:intron 50.0%
TTGCTGAGGACGTTGACCAT+TGG + chr6_2:4745940-4745959 None:intergenic 50.0%
GACGTCGTTGAAGCCATCGT+CGG + chr6_2:4737618-4737637 None:intergenic 55.0%
GATTGTGTCATCGCCCGAAG+TGG - chr6_2:4740115-4740134 Msa0906180:intron 55.0%
! GGTGTTATCGACCCCAACCT+TGG + chr6_2:4740231-4740250 None:intergenic 55.0%
AGGTTGGGGTCGATAACACC+CGG - chr6_2:4740231-4740250 Msa0906180:CDS 55.0%
CCAGGCTCACCAATTAGCAC+AGG + chr6_2:4741397-4741416 None:intergenic 55.0%
CCTGTGCTAATTGGTGAGCC+TGG - chr6_2:4741394-4741413 Msa0906180:intron 55.0%
CACACAACACTTGGGAGGGA+GGG + chr6_2:4741466-4741485 None:intergenic 55.0%
ACACACAACACTTGGGAGGG+AGG + chr6_2:4741467-4741486 None:intergenic 55.0%
CACGACTCCCAGTGAAAACG+AGG - chr6_2:4742387-4742406 Msa0906180:CDS 55.0%
GGATTCGGCTCAGTTGAGCT+AGG + chr6_2:4742505-4742524 None:intergenic 55.0%
TCCCTCGTTGGAGCTGGATT+CGG + chr6_2:4742520-4742539 None:intergenic 55.0%
AGTTCCCCTCGACCAAGCAT+AGG + chr6_2:4743095-4743114 None:intergenic 55.0%
! GCTCGCCCTGTTTCCCTTTT+AGG + chr6_2:4743789-4743808 None:intergenic 55.0%
! ACAACTCGAGGGTGCAGAGA+AGG - chr6_2:4744613-4744632 Msa0906180:intron 55.0%
GCGATCCAACGTTCAAGAGC+AGG - chr6_2:4744839-4744858 Msa0906180:intron 55.0%
TTCATGTTCATGGGCCCCAC+AGG - chr6_2:4744893-4744912 Msa0906180:intron 55.0%
TCGGTCTTACCGACACCTGT+GGG + chr6_2:4744911-4744930 None:intergenic 55.0%
CATGTAGGAAGCAAGGGCCT+TGG + chr6_2:4744939-4744958 None:intergenic 55.0%
! AGATTGATCGGTGCTCCTCC+TGG - chr6_2:4745025-4745044 Msa0906180:intron 55.0%
CGAAGAGGGAGGGCAACTAA+CGG - chr6_2:4745060-4745079 Msa0906180:intron 55.0%
TTTGGTCACGGTCAAGAGGC+CGG + chr6_2:4745399-4745418 None:intergenic 55.0%
ACCGGCCTAGCACCATAGTT+TGG + chr6_2:4745807-4745826 None:intergenic 55.0%
GTCATCGCCCGAAGTGGCAA+AGG - chr6_2:4740121-4740140 Msa0906180:intron 60.0%
GGTCGATAACACCCGGCTTC+TGG - chr6_2:4740238-4740257 Msa0906180:CDS 60.0%
CGATAACACCCGGCTTCTGG+AGG - chr6_2:4740241-4740260 Msa0906180:CDS 60.0%
TGTCGGTAGCCTCCAGAAGC+CGG + chr6_2:4740253-4740272 None:intergenic 60.0%
GCACATTCAGCGCCAACCCA+AGG - chr6_2:4740274-4740293 Msa0906180:intron 60.0%
ACAACACTTGGGAGGGAGGG+AGG + chr6_2:4741463-4741482 None:intergenic 60.0%
AGCCGAATCCAGCTCCAACG+AGG - chr6_2:4742515-4742534 Msa0906180:CDS 60.0%
GCCGAATCCAGCTCCAACGA+GGG - chr6_2:4742516-4742535 Msa0906180:CDS 60.0%
CGAGGGGAACTGCGATGCAT+TGG - chr6_2:4743104-4743123 Msa0906180:CDS 60.0%
AGGGCGAGCTTACCGAGCAA+TGG - chr6_2:4743800-4743819 Msa0906180:intron 60.0%
GGGCGAGCTTACCGAGCAAT+GGG - chr6_2:4743801-4743820 Msa0906180:intron 60.0%
GCTCGGCCTGTAGGATCTCA+AGG + chr6_2:4744532-4744551 None:intergenic 60.0%
CATACTCTCGCTCGGCCTGT+AGG + chr6_2:4744541-4744560 None:intergenic 60.0%
TCGGCTACTGCCTTGACAGC+AGG + chr6_2:4744818-4744837 None:intergenic 60.0%
TGCTGTCAAGGCAGTAGCCG+AGG - chr6_2:4744817-4744836 Msa0906180:intron 60.0%
TTCATGGGCCCCACAGGTGT+CGG - chr6_2:4744899-4744918 Msa0906180:intron 60.0%
CGGTCTTACCGACACCTGTG+GGG + chr6_2:4744910-4744929 None:intergenic 60.0%
CTCGGTCTTACCGACACCTG+TGG + chr6_2:4744912-4744931 None:intergenic 60.0%
CGGTAAGACCGAGCTAGCCA+AGG - chr6_2:4744919-4744938 Msa0906180:intron 60.0%
! AGCAAGGGCCTTGGCTAGCT+CGG + chr6_2:4744930-4744949 None:intergenic 60.0%
GGTGCTCCTCCTGGATACGT+TGG - chr6_2:4745034-4745053 Msa0906180:intron 60.0%
GTCGGTAGCCTCCAGAAGCC+GGG + chr6_2:4740252-4740271 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 4737483 4746309 4737483 ID=Msa0906180;Name=Msa0906180
chr6_2 mRNA 4737483 4746309 4737483 ID=Msa0906180-mRNA-1;Parent=Msa0906180;Name=Msa0906180-mRNA-1;_AED=0.28;_eAED=0.28;_QI=138|0.9|0.81|1|1|1|11|269|957
chr6_2 exon 4737483 4738081 4737483 ID=Msa0906180-mRNA-1:exon:1378;Parent=Msa0906180-mRNA-1
chr6_2 exon 4738351 4739277 4738351 ID=Msa0906180-mRNA-1:exon:1377;Parent=Msa0906180-mRNA-1
chr6_2 exon 4739922 4740050 4739922 ID=Msa0906180-mRNA-1:exon:1376;Parent=Msa0906180-mRNA-1
chr6_2 exon 4740202 4740287 4740202 ID=Msa0906180-mRNA-1:exon:1375;Parent=Msa0906180-mRNA-1
chr6_2 exon 4740433 4740741 4740433 ID=Msa0906180-mRNA-1:exon:1374;Parent=Msa0906180-mRNA-1
chr6_2 exon 4741515 4741665 4741515 ID=Msa0906180-mRNA-1:exon:1373;Parent=Msa0906180-mRNA-1
chr6_2 exon 4741918 4741972 4741918 ID=Msa0906180-mRNA-1:exon:1372;Parent=Msa0906180-mRNA-1
chr6_2 exon 4742349 4742544 4742349 ID=Msa0906180-mRNA-1:exon:1371;Parent=Msa0906180-mRNA-1
chr6_2 exon 4742902 4743139 4742902 ID=Msa0906180-mRNA-1:exon:1370;Parent=Msa0906180-mRNA-1
chr6_2 exon 4743497 4743715 4743497 ID=Msa0906180-mRNA-1:exon:1369;Parent=Msa0906180-mRNA-1
chr6_2 exon 4745938 4746309 4745938 ID=Msa0906180-mRNA-1:exon:1368;Parent=Msa0906180-mRNA-1
chr6_2 five_prime_UTR 4746172 4746309 4746172 ID=Msa0906180-mRNA-1:five_prime_utr;Parent=Msa0906180-mRNA-1
chr6_2 CDS 4745938 4746171 4745938 ID=Msa0906180-mRNA-1:cds;Parent=Msa0906180-mRNA-1
chr6_2 CDS 4743497 4743715 4743497 ID=Msa0906180-mRNA-1:cds;Parent=Msa0906180-mRNA-1
chr6_2 CDS 4742902 4743139 4742902 ID=Msa0906180-mRNA-1:cds;Parent=Msa0906180-mRNA-1
chr6_2 CDS 4742349 4742544 4742349 ID=Msa0906180-mRNA-1:cds;Parent=Msa0906180-mRNA-1
chr6_2 CDS 4741918 4741972 4741918 ID=Msa0906180-mRNA-1:cds;Parent=Msa0906180-mRNA-1
chr6_2 CDS 4741515 4741665 4741515 ID=Msa0906180-mRNA-1:cds;Parent=Msa0906180-mRNA-1
chr6_2 CDS 4740433 4740741 4740433 ID=Msa0906180-mRNA-1:cds;Parent=Msa0906180-mRNA-1
chr6_2 CDS 4740202 4740287 4740202 ID=Msa0906180-mRNA-1:cds;Parent=Msa0906180-mRNA-1
chr6_2 CDS 4739922 4740050 4739922 ID=Msa0906180-mRNA-1:cds;Parent=Msa0906180-mRNA-1
chr6_2 CDS 4738351 4739277 4738351 ID=Msa0906180-mRNA-1:cds;Parent=Msa0906180-mRNA-1
chr6_2 CDS 4737752 4738081 4737752 ID=Msa0906180-mRNA-1:cds;Parent=Msa0906180-mRNA-1
chr6_2 three_prime_UTR 4737483 4737751 4737483 ID=Msa0906180-mRNA-1:three_prime_utr;Parent=Msa0906180-mRNA-1
Gene Sequence

>Msa0906180

ATGGCTTCAACGACGTCGTTTTCAAGTCTCATACTTCATCATTCTGTTCCAATTTCCCGGAACCGAAACAATGCTCAATTGGGTCCGTTTCAAGCTTCTTTTACCTCTCAATTGAAACCCACTTCCTTGAATTCAATTCCATTGAAGAAAAGAGAAGCTTTTTCAAATGGGTCTTTGAGAATGAGAAAAAACCCTAAACAGTTTATTGTTCGGTGTGCAGATTCAAGTGGAAAGGTTTCACAGCAAGAATTCACAGAAATGGCGTGGCAAGCGATTGTGTCATCGCCCGAAGTGGCAAAGGAGAACAAGCATCAAATTGTGGAGACAGAGCACTTGATGAAAGCTTTATTAGAGCAAAAGAATGGGCTTGCACGTCGAATCTTTACCAAGGTTGGGGTCGATAACACCCGGCTTCTGGAGGCTACCGACAAGCACATTCAGCGCCAACCCAAGGTTCTAGGGGAATCAGCCGGTTCAATGTTGGGGCGTGATTTGGAGGCATTGATTCAGAGAGCCAGGGAATTCAAGAAAGAATATGGGGATTCATTTGTATCAGTTGAGCACTTGGTTCTTGGTTTTGCCCAAGATCGACGATTTGGGAAGATATTGTTTAGAGATTTTCAAATATCTCAGCAAGCTCTAAAAACTGCTATAGAGTCTGTAAGGGGACGCCAGTCAGTTATCGATCAAGATCCGGAAGGAAAATATGAAGCCTTGGAAAAATATGGAAAAGATTTGACAGCAATGGCCAAAGCAGGGAAACTTGACCCTGTCATAGGAAGAGATGATGAAATACGCAGGTGCATTCAAATTCTCTCCAGGAGAACAAAGAACAATCCTGTGCTAATTGGTGAGCCTGGTGTTGGAAAGACTGCTATTTCTGAAGGATTGGCTCAGAGAATTGTTCAAGGAGATGTCCCTCAAGCTTTGATGAATCGAAGGCTTATATCTCTTGATATGGGTGCACTTATTGCTGGAGCAAAATATCGGGGAGAATTTGAGGATCGGCTCAAAGCCGTTCTCAAAGAAGTTACAGAATCTGATGGTCAAACTATACTTTTCATTGATGAGATCCATACAGTTGTTGGGGCAGGTGCTACGAATGGTGCTATGGATGCTGGTAACCTCTTAAAGCCTATGCTTGGTCGAGGGGAACTGCGATGCATTGGTGCAACAACATTAGATGAGTATCGGAAGTATATTGAGAAGGATCCTGCGCTAGAACGTCGTTTTCAGCAGGTTTATGTTGACCAACCTTCAGTTGAAAATACCATTTCAATACTAAGGGGTCTGCGGGAAAGATATGAGTTGCATCATGGAGTTCGCATTTCTGACACTGCACTTGTGGATGCTGCAATTCTCTCAGATCGATACATAAGTGGGAGATTTTTGCCCGACAAAGCTATTGATCTGGTTGACGAAGCAGCTGCTAAACTGAAAATGGAAATCACTTCTAAGCCCACTGCACTTGATGAGATTAATAGGTCAGCTTCTAGAGATAGGTTAAACCGTCTTGAGACAGAGCTCTCTCTCCTAAAAGGGAAACAGGGCGAGCTTACCGAGCAATGGGAACATGAAAAGTCTGTAATGACTCGTCTTCAGTCAATCAAAGAAGAGATAGACAGAGTAAACCTTGAGATCCTACAGGCCGAGCGAGAGTATGATCTAAATCGTGCTGCTGAATTAAAGTACGGCAGTTTAAATTCTTTGCAACGACAACTCGAGGGTGCAGAGAAGGAGTTACATGAATATATGAGCTCTGGTAAGTCTATGTTGAGAGAGGAAGTAACTGGGAATGATATTGGTGAAATTGTGAGCCAGTGGACTGGTATCCCGATTTCTAAACTTCAACAATCAGAGAGAGAGAAGCTGTTATATTTAGAGGATGAACTCCATAAGCGTGTTGTAGGTCAAGATCCTGCTGTCAAGGCAGTAGCCGAGGCGATCCAACGTTCAAGAGCAGGTCTATCAGATCCTCATCGTCCAATCGCTAGCTTCATGTTCATGGGCCCCACAGGTGTCGGTAAGACCGAGCTAGCCAAGGCCCTTGCTTCCTACATGTTCAATACAGAAGAAGCACTTGTTCGGATTGATATGAGTGAGTACATGGAAAAGCATACGGTTTCAAGATTGATCGGTGCTCCTCCTGGATACGTTGGATACGAAGAGGGAGGGCAACTAACGGAAACAGTCCGTCGAAGACCTTATGCAGTTATTTTGTTTGATGAGATTGAAAAGGCACACTCGGATGTTTTCAATGTATTCCTTCAAATTTTGGATGATGGCAGAGTAACCGATTCACAAGGCCGCACAGTAAGTTTTACCAACACTGTCATCATCATGACCTCAAATGTGGGATCACAGTACATTCTCAACACGGATGATGACACTGCGCCAAAAGATTCGGCATATGAAAACATGAAGCAGCGTGTAATGGATGCTGCAAGATCCATTTTTCGCCCCGAGTTCATGAATAGAGTTGATGAGTATATTGTTTTCCGGCCTCTTGACCGTGACCAAATAAGTAGCATTGTCAGATTGCAGTTGGAGCGCGTGCAGAAGAGAGTTGCTGACCGCAAGATGAAAATCCGAGTAACAGAGCCTGCTATCCAACTTCTTGGAAGTTTAGGTTACGATCCAAACTATGGTGCTAGGCCGGTGAAGCGAGTGATTCAACAAAATGTGGAAAATGAACTTGCAAAGGGTATTCTTCGAGGAGAATTTAAGGAAGAGGACACAATTTTAGTCGACACAGAAGTCACAATACTCGCCAATGGTCAACGTCCTCAGCAAAAGCTAGTTTTTAGGAGGGTTGAAGCTGATTCAGAATCTACTGCTAAAGACAGCAGGGAAAGTTTTCCACAGATTCTATGA
Protein sequence

>Msa0906180

MASTTSFSSLILHHSVPISRNRNNAQLGPFQASFTSQLKPTSLNSIPLKKREAFSNGSLRMRKNPKQFIVRCADSSGKVSQQEFTEMAWQAIVSSPEVAKENKHQIVETEHLMKALLEQKNGLARRIFTKVGVDNTRLLEATDKHIQRQPKVLGESAGSMLGRDLEALIQRAREFKKEYGDSFVSVEHLVLGFAQDRRFGKILFRDFQISQQALKTAIESVRGRQSVIDQDPEGKYEALEKYGKDLTAMAKAGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLAQRIVQGDVPQALMNRRLISLDMGALIAGAKYRGEFEDRLKAVLKEVTESDGQTILFIDEIHTVVGAGATNGAMDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPSVENTISILRGLRERYELHHGVRISDTALVDAAILSDRYISGRFLPDKAIDLVDEAAAKLKMEITSKPTALDEINRSASRDRLNRLETELSLLKGKQGELTEQWEHEKSVMTRLQSIKEEIDRVNLEILQAEREYDLNRAAELKYGSLNSLQRQLEGAEKELHEYMSSGKSMLREEVTGNDIGEIVSQWTGIPISKLQQSEREKLLYLEDELHKRVVGQDPAVKAVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKHTVSRLIGAPPGYVGYEEGGQLTETVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNTDDDTAPKDSAYENMKQRVMDAARSIFRPEFMNRVDEYIVFRPLDRDQISSIVRLQLERVQKRVADRKMKIRVTEPAIQLLGSLGYDPNYGARPVKRVIQQNVENELAKGILRGEFKEEDTILVDTEVTILANGQRPQQKLVFRRVEADSESTAKDSRESFPQIL*