AlfalfaGEDB | Msa0972740

M. sativa cultivar zhongmu-4 / Msa0972740

KEGG: -
GO: -
PFAM: PF02704.17

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0972740	XP_013450870.1	93.333	240	2	1	10	235	9	248	8.56e-142	407

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0972740	sp\|Q9LFR3\|GASAE_ARATH	66.154	65	22	0	171	235	211	275	3.17e-27	108

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0972740	I3T630	93.333	240	2	1	10	235	9	248	4.09e-142	407

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0016040	Msa0972740	0.803068	4.159315e-49	-8.615850e-47
Msa0042640	Msa0972740	0.823742	1.175644e-53	-8.615850e-47
Msa0075530	Msa0972740	0.822764	1.989113e-53	-8.615850e-47
Msa0086370	Msa0972740	0.802087	6.624524e-49	-8.615850e-47
Msa0094570	Msa0972740	0.805325	1.409396e-49	-8.615850e-47
Msa0625620	Msa0972740	0.803234	3.842478e-49	-8.615850e-47
Msa0687090	Msa0972740	0.811789	5.872912e-51	-8.615850e-47
Msa0719270	Msa0972740	0.826108	3.250405e-54	-8.615850e-47
Msa0734250	Msa0972740	0.802798	4.727593e-49	-8.615850e-47
Msa0737020	Msa0972740	0.802072	6.671563e-49	-8.615850e-47
Msa0740710	Msa0972740	0.824542	7.630919e-54	-8.615850e-47
Msa0745140	Msa0972740	0.803760	2.989054e-49	-8.615850e-47
Msa0776640	Msa0972740	0.804752	1.857669e-49	-8.615850e-47
Msa0778600	Msa0972740	0.850163	2.028557e-60	-8.615850e-47
Msa0825920	Msa0972740	0.804162	2.466311e-49	-8.615850e-47
Msa0840520	Msa0972740	0.825475	4.594002e-54	-8.615850e-47
Msa0140130	Msa0972740	0.816353	5.777550e-52	-8.615850e-47
Msa0140380	Msa0972740	0.801917	7.182295e-49	-8.615850e-47
Msa0141640	Msa0972740	0.812702	3.711329e-51	-8.615850e-47
Msa0154620	Msa0972740	0.813975	1.949558e-51	-8.615850e-47
Msa0170070	Msa0972740	0.824153	9.415980e-54	-8.615850e-47
Msa0178450	Msa0972740	0.816324	5.864679e-52	-8.615850e-47
Msa0218020	Msa0972740	0.801665	8.087780e-49	-8.615850e-47
Msa0367690	Msa0972740	0.804392	2.208248e-49	-8.615850e-47
Msa0415450	Msa0972740	0.813663	2.283628e-51	-8.615850e-47
Msa0457570	Msa0972740	0.820109	8.157727e-53	-8.615850e-47
Msa0460070	Msa0972740	0.817052	4.027321e-52	-8.615850e-47
Msa0347530	Msa0972740	0.801287	9.668890e-49	-8.615850e-47
Msa0507920	Msa0972740	0.802785	4.757636e-49	-8.615850e-47
Msa0569530	Msa0972740	0.800214	1.600499e-48	-8.615850e-47
Msa0570010	Msa0972740	0.810582	1.073012e-50	-8.615850e-47
Msa0866530	Msa0972740	0.824511	7.759544e-54	-8.615850e-47
Msa0900760	Msa0972740	0.834076	3.694742e-56	-8.615850e-47
Msa0909760	Msa0972740	0.817304	3.535031e-52	-8.615850e-47
Msa0935740	Msa0972740	0.953116	5.554151e-111	-8.615850e-47
Msa0972740	Msa1076020	0.803953	2.724972e-49	-8.615850e-47
Msa0972740	Msa1219770	0.807928	3.977725e-50	-8.615850e-47
Msa0972740	Msa1221120	0.810785	9.699591e-51	-8.615850e-47
Msa0972740	Msa1228580	0.812061	5.122612e-51	-8.615850e-47
Msa0972740	Msa1252790	0.824711	6.960763e-54	-8.615850e-47
Msa0972740	Msa1263780	0.811517	6.728806e-51	-8.615850e-47
Msa0972740	Msa1265450	0.812225	4.719592e-51	-8.615850e-47
Msa0972740	Msa1279120	0.822330	2.509248e-53	-8.615850e-47
Msa0972740	Msa1294790	0.802070	6.680427e-49	-8.615850e-47
Msa0972740	Msa1297070	0.802654	5.062825e-49	-8.615850e-47
Msa0972740	Msa1300460	0.813788	2.143240e-51	-8.615850e-47
Msa0972740	Msa1308850	0.830649	2.607595e-55	-8.615850e-47
Msa0972740	Msa1321530	0.815291	9.966807e-52	-8.615850e-47
Msa0972740	Msa1387500	0.807006	6.240241e-50	-8.615850e-47
Msa0972740	Msa1406720	0.802252	6.127841e-49	-8.615850e-47
Msa0972740	Msa1407840	0.802323	5.924952e-49	-8.615850e-47
Msa0972740	Msa1417370	0.817597	3.037124e-52	-8.615850e-47
Msa0972740	Msa1435960	0.817692	2.889729e-52	-8.615850e-47
Msa0972740	Msa1436620	0.827251	1.734945e-54	-8.615850e-47
Msa0972740	Msa1437810	0.801813	7.544323e-49	-8.615850e-47
Msa0972740	Msa1460520	0.805219	1.483422e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0972740	MtrunA17_Chr6g0451481	91.593	226	4	3	10	235	9	219	1.87e-132	372
Msa0972740	MtrunA17_Chr6g0451501	40.851	235	62	6	1	235	5	162	1.88e-43	144
Msa0972740	MtrunA17_Chr6g0451491	60.577	104	36	2	137	235	27	130	4.15e-35	121
Msa0972740	MtrunA17_Chr8g0364311	68.750	64	20	0	172	235	49	112	2.85e-27	100
Msa0972740	MtrunA17_Chr4g0059421	72.131	61	17	0	175	235	55	115	5.23e-24	92.8
Msa0972740	MtrunA17_Chr1g0200531	55.224	67	29	1	169	235	35	100	5.15e-18	76.6
Msa0972740	MtrunA17_Chr3g0142671	57.377	61	25	1	175	235	44	103	1.21e-15	70.5
Msa0972740	MtrunA17_Chr1g0156601	59.016	61	24	1	175	235	42	101	3.09e-15	69.3
Msa0972740	MtrunA17_Chr1g0156621	57.377	61	25	1	175	235	41	100	2.52e-13	63.9
Msa0972740	MtrunA17_Chr1g0207611	47.541	61	31	1	175	235	31	90	1.91e-11	58.9
Msa0972740	MtrunA17_Chr5g0415001	46.774	62	32	1	174	235	32	92	3.76e-11	58.2
Msa0972740	MtrunA17_Chr8g0371941	46.753	77	35	2	159	235	33	103	8.14e-11	57.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0972740	AT5G14920.1	66.154	65	22	0	171	235	211	275	3.23e-28	108
Msa0972740	AT1G75750.1	57.377	61	25	1	175	235	39	98	1.97e-14	67.4
Msa0972740	AT1G75750.2	57.377	61	25	1	175	235	38	97	2.51e-14	67.0
Msa0972740	AT2G18420.1	57.377	61	25	1	175	235	35	94	1.92e-13	64.7
Msa0972740	AT1G22690.1	52.459	61	28	1	175	235	60	119	2.90e-13	64.7
Msa0972740	AT1G22690.2	52.459	61	28	1	175	235	60	119	2.90e-13	64.7
Msa0972740	AT1G22690.3	52.459	61	28	1	175	235	60	119	2.90e-13	64.7
Msa0972740	AT2G18420.2	57.377	61	25	1	175	235	11	70	3.24e-13	63.2
Msa0972740	AT4G09600.1	55.738	61	26	1	175	235	40	99	8.61e-13	63.2
Msa0972740	AT2G14900.1	37.209	86	49	3	152	235	26	108	5.93e-11	58.2

Find 82 sgRNAs with CRISPR-Local

Find 285 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCCTTCCATGATTTGACTAT+TGG	0.215760	6_4:-5025501	None:intergenic
GAATTTAGATTGAAATTAAA+TGG	0.241741	6_4:+5026350	Msa0972740:three_prime_UTR
CTAAATTCAAACAAAATTCT+TGG	0.242055	6_4:-5026335	None:intergenic
GCATTCCACTATGTGGTTAT+AGG	0.264033	6_4:+5025950	Msa0972740:CDS
ATTATGCTTAAATTGTTATA+AGG	0.284454	6_4:+5026183	Msa0972740:three_prime_UTR
GTTATAAGGTTTAAAATTGC+TGG	0.298557	6_4:+5026197	Msa0972740:three_prime_UTR
ATCACCTCCTTCTCCTCCTT+TGG	0.313521	6_4:+5025347	Msa0972740:CDS
TGCATTATATAATGTATCTA+TGG	0.348800	6_4:-5026126	None:intergenic
TATATAATGCACCTATCTAA+TGG	0.377533	6_4:+5026138	Msa0972740:three_prime_UTR
TCTCTGTTACCATAAGTTCC+TGG	0.385043	6_4:-5026048	None:intergenic
ACAATAGGTGGTGATTGATA+TGG	0.386150	6_4:-5025276	None:intergenic
TGTGTCCCTCCAGGAACTTA+TGG	0.404918	6_4:+5026039	Msa0972740:CDS
GGTGTTGGTGGTGCCTTCAC+TGG	0.418572	6_4:-5025156	None:intergenic
ACTATTGGTGGTGATTGATA+AGG	0.424720	6_4:-5025444	None:intergenic
GTTGGTGGTGCCTTCACTAT+AGG	0.433989	6_4:-5025396	None:intergenic
TGGCAAGTGTTACACTGATA+TGG	0.441521	6_4:+5026077	Msa0972740:CDS
TAAGGTGGTGATTTAACTAA+AGG	0.446310	6_4:-5025180	None:intergenic
GAAGGAGGTGATTTCACAAT+AGG	0.447190	6_4:-5025231	None:intergenic
AAGCTTAGAAACCATTAGAT+AGG	0.448020	6_4:-5026149	None:intergenic
GAAGGAGGTGATTTCACAAT+AGG	0.449629	6_4:-5025336	None:intergenic
GGAGAAGGTGGTGTTACTAT+AGG	0.467704	6_4:-5025135	None:intergenic
GGTGGTGGAGATGGAGCAAC+AGG	0.470027	6_4:-5025474	None:intergenic
ACTATAGGTGGAGGAGTTGG+TGG	0.476412	6_4:-5025411	None:intergenic
TTCACTATAGGTGGAGGAGT+TGG	0.477408	6_4:-5025414	None:intergenic
GGAGAAGGTGCCTTTACAAT+AGG	0.477945	6_4:-5025291	None:intergenic
CTACTCCAATAGTCAAATCA+TGG	0.478634	6_4:+5025496	Msa0972740:CDS
ATCACCTCCTTCACCACCAT+TGG	0.482927	6_4:+5025242	Msa0972740:CDS
AACAAAATTCTTGGACCACA+TGG	0.492555	6_4:-5026326	None:intergenic
ATAGGTGGTGTTGGTTTCAC+TGG	0.498511	6_4:-5025213	None:intergenic
ACTATAGGTGGTGATTGATA+AGG	0.503850	6_4:-5025381	None:intergenic
GATTTCACAATAGGTGGTGT+TGG	0.507384	6_4:-5025222	None:intergenic
GATTTCACAATAGGTGGTGT+TGG	0.507384	6_4:-5025327	None:intergenic
TTCACTGGTGGTGATTGATA+AGG	0.508150	6_4:-5025198	None:intergenic
TGATGAAGATCTCAAGATAG+TGG	0.509151	6_4:+5024307	Msa0972740:CDS
CGGTGCAAATGTGTCCCTCC+AGG	0.510158	6_4:+5026030	Msa0972740:CDS
ATAGGACTTGGTGGAGCTGT+AGG	0.510347	6_4:-5025117	None:intergenic
GAAATTAAATGGTATTGTCA+TGG	0.514776	6_4:+5026361	Msa0972740:three_prime_UTR
TAATGTATCTATGGACACTT+AGG	0.518660	6_4:-5026117	None:intergenic
CATGATTTGACTATTGGAGT+AGG	0.520632	6_4:-5025495	None:intergenic
GATTTAACTAAAGGTGGTGT+TGG	0.520898	6_4:-5025171	None:intergenic
TTGACTATTGGAGTAGGTGG+TGG	0.529784	6_4:-5025489	None:intergenic
GAGTAAAGATTATACCTTCG+TGG	0.536465	6_4:-5024085	None:intergenic
TCCAATAGTCAAATCATGGA+AGG	0.539250	6_4:+5025500	Msa0972740:CDS
ATTGGAGTAGGTGGTGGAGA+TGG	0.542148	6_4:-5025483	None:intergenic
TCAATCACCACCTATTGTAA+AGG	0.543871	6_4:+5025281	Msa0972740:CDS
TAGGACTTGGTGGAGCTGTA+GGG	0.552061	6_4:-5025116	None:intergenic
TTAACTAAAGGTGGTGTTGG+TGG	0.560001	6_4:-5025168	None:intergenic
GGTGGTGCCTTCACTGGAGA+AGG	0.561894	6_4:-5025150	None:intergenic
GGTGTTACTATAGGACTTGG+TGG	0.562271	6_4:-5025126	None:intergenic
GGTGGTGATTTAACTAAAGG+TGG	0.563616	6_4:-5025177	None:intergenic
TGGCACCTATAACCACATAG+TGG	0.564127	6_4:-5025955	None:intergenic
GGTGGTGTTACTATAGGACT+TGG	0.566564	6_4:-5025129	None:intergenic
GAAGGTGCCTTTACAATAGG+TGG	0.569135	6_4:-5025288	None:intergenic
GGTGGTGTTGGTTTCACTAG+AGG	0.574102	6_4:-5025315	None:intergenic
CTGGAGGGACACATTTGCAC+CGG	0.583431	6_4:-5026029	None:intergenic
CCAATAGTCAAATCATGGAA+GGG	0.585464	6_4:+5025501	Msa0972740:CDS
GGTTTCACTAGAGGAGGAGA+AGG	0.586785	6_4:-5025306	None:intergenic
TTCACCAAAGGAGGAGAAGG+AGG	0.588422	6_4:-5025351	None:intergenic
AACACCACCTTCTCCAGTGA+AGG	0.591450	6_4:+5025143	Msa0972740:CDS
GCAGATTGCATTCCACTATG+TGG	0.591494	6_4:+5025943	Msa0972740:intron
GGTGTTGGTTTCACTAGAGG+AGG	0.593802	6_4:-5025312	None:intergenic
GATTTCACCAATGGTGGTGA+AGG	0.594431	6_4:-5025249	None:intergenic
GGTGGTGTTGGTTTCACTGG+TGG	0.594612	6_4:-5025210	None:intergenic
GGAGGTGATTTCACAATAGG+TGG	0.599121	6_4:-5025228	None:intergenic
GGAGGTGATTTCACAATAGG+TGG	0.599121	6_4:-5025333	None:intergenic
TATGGTGGTGATTTCACCAA+TGG	0.601372	6_4:-5025258	None:intergenic
GGTGCCTTCACTGGAGAAGG+TGG	0.604169	6_4:-5025147	None:intergenic
ATTGGTGGTGATTGATAAGG+AGG	0.614855	6_4:-5025441	None:intergenic
TCAATCACCACCTATAGTGA+AGG	0.619479	6_4:+5025386	Msa0972740:CDS
ATAGGTGGTGATTGATATGG+TGG	0.620609	6_4:-5025273	None:intergenic
ACTGGTGGTGATTGATAAGG+TGG	0.624494	6_4:-5025195	None:intergenic
CATGCATGACTTGTTGTGAC+CGG	0.628034	6_4:+5026010	Msa0972740:CDS
TACACTGATATGGTGACTCA+TGG	0.628922	6_4:+5026087	Msa0972740:CDS
TTCACCAATGGTGGTGAAGG+AGG	0.636204	6_4:-5025246	None:intergenic
GGTGGTGCCTTCACTATAGG+TGG	0.638916	6_4:-5025393	None:intergenic
CTGTTACCATAAGTTCCTGG+AGG	0.651625	6_4:-5026045	None:intergenic
GATTTGACTATTGGAGTAGG+TGG	0.657281	6_4:-5025492	None:intergenic
GGTGGAGATGGAGCAACAGG+TGG	0.659007	6_4:-5025471	None:intergenic
ATAGGTGGTGATTGATAAGG+TGG	0.660552	6_4:-5025378	None:intergenic
GGTGGTGATTTCACCAATGG+TGG	0.693978	6_4:-5025255	None:intergenic
TGTTACCATAAGTTCCTGGA+GGG	0.694188	6_4:-5026044	None:intergenic
TCTATGTAATATGATCCATG+TGG	0.767847	6_4:+5026311	Msa0972740:three_prime_UTR

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAAAATAAAAATTAGAAGTA+TGG	-	chr6_4:5024729-5024748	None:intergenic	10.0%
!!!	TATTTATACTAAAATTTTAG+AGG	-	chr6_4:5025634-5025653	None:intergenic	10.0%
!!	TAAAATAAAAATTAGAAGTA+TGG	-	chr6_4:5024729-5024748	None:intergenic	10.0%
!!!	TATTTATACTAAAATTTTAG+AGG	-	chr6_4:5025634-5025653	None:intergenic	10.0%
!!	TAAATCAAGAAGAAAAAAAT+TGG	-	chr6_4:5024216-5024235	None:intergenic	15.0%
!!	AAAATTAGTAATGTGATATT+TGG	+	chr6_4:5025074-5025093	Msa0972740:intron	15.0%
!!	CAAAAATATGATTATATGTT+TGG	+	chr6_4:5025662-5025681	Msa0972740:intron	15.0%
!!	ATAAATTCACATATATATTG+TGG	+	chr6_4:5025828-5025847	Msa0972740:intron	15.0%
!!	AAGTAGTGATTAATTAATAT+TGG	+	chr6_4:5025866-5025885	Msa0972740:intron	15.0%
!!	ATTATGCTTAAATTGTTATA+AGG	+	chr6_4:5026183-5026202	Msa0972740:three_prime_UTR	15.0%
!!	GAATTTAGATTGAAATTAAA+TGG	+	chr6_4:5026350-5026369	Msa0972740:three_prime_UTR	15.0%
!!!	ATAAATTTGATTTTCATTTC+TGG	+	chr6_4:5026444-5026463	Msa0972740:three_prime_UTR	15.0%
!!	TAAATCAAGAAGAAAAAAAT+TGG	-	chr6_4:5024216-5024235	None:intergenic	15.0%
!!	AAAATTAGTAATGTGATATT+TGG	+	chr6_4:5025074-5025093	Msa0972740:intron	15.0%
!!	CAAAAATATGATTATATGTT+TGG	+	chr6_4:5025662-5025681	Msa0972740:intron	15.0%
!!	ATAAATTCACATATATATTG+TGG	+	chr6_4:5025828-5025847	Msa0972740:intron	15.0%
!!	AAGTAGTGATTAATTAATAT+TGG	+	chr6_4:5025866-5025885	Msa0972740:intron	15.0%
!!	ATTATGCTTAAATTGTTATA+AGG	+	chr6_4:5026183-5026202	Msa0972740:three_prime_UTR	15.0%
!!	GAATTTAGATTGAAATTAAA+TGG	+	chr6_4:5026350-5026369	Msa0972740:three_prime_UTR	15.0%
!!	AAAAATGCTTAGAAGAAAAA+TGG	-	chr6_4:5024040-5024059	None:intergenic	20.0%
!!	AACATATTTATCTACTTAGA+AGG	+	chr6_4:5024132-5024151	Msa0972740:intron	20.0%
!!	TATAATATATCTTTATGTGC+AGG	+	chr6_4:5024274-5024293	Msa0972740:intron	20.0%
!!	GAATCAAACAAAAATAGAAA+GGG	-	chr6_4:5024360-5024379	None:intergenic	20.0%
!!!	GTTGATCTGTTTTTTAATAA+AGG	-	chr6_4:5024534-5024553	None:intergenic	20.0%
!!!	ATAAAAATTAGAAGTATGGT+AGG	-	chr6_4:5024725-5024744	None:intergenic	20.0%
!!	TTGACAAAATTATCGTAATA+TGG	-	chr6_4:5024846-5024865	None:intergenic	20.0%
!!!	TTGTATAGTAGTTAATGTTT+TGG	-	chr6_4:5024901-5024920	None:intergenic	20.0%
!!	AAAAATGAGCAAAAAAGTTT+GGG	-	chr6_4:5025688-5025707	None:intergenic	20.0%
!!	AAAAAATGAGCAAAAAAGTT+TGG	-	chr6_4:5025689-5025708	None:intergenic	20.0%
!!!	AAACTTTTTTGCTCATTTTT+TGG	+	chr6_4:5025688-5025707	Msa0972740:intron	20.0%
!!!	AAACCTGTATTTTTATTTTG+TGG	+	chr6_4:5025920-5025939	Msa0972740:intron	20.0%
!!!	AACCTGTATTTTTATTTTGT+GGG	+	chr6_4:5025921-5025940	Msa0972740:intron	20.0%
!!	TGCATTATATAATGTATCTA+TGG	-	chr6_4:5026129-5026148	None:intergenic	20.0%
!!	CTAAATTCAAACAAAATTCT+TGG	-	chr6_4:5026338-5026357	None:intergenic	20.0%
!!!	ATGGAAATATATTTTGCTAT+TGG	+	chr6_4:5026380-5026399	Msa0972740:three_prime_UTR	20.0%
!!!	ATATTTTGCTATTGGAAATT+CGG	+	chr6_4:5026388-5026407	Msa0972740:three_prime_UTR	20.0%
!!	AAAAATGCTTAGAAGAAAAA+TGG	-	chr6_4:5024040-5024059	None:intergenic	20.0%
!!	AACATATTTATCTACTTAGA+AGG	+	chr6_4:5024132-5024151	Msa0972740:intron	20.0%
!!	TATAATATATCTTTATGTGC+AGG	+	chr6_4:5024274-5024293	Msa0972740:intron	20.0%
!!	GAATCAAACAAAAATAGAAA+GGG	-	chr6_4:5024360-5024379	None:intergenic	20.0%
!!!	GTTGATCTGTTTTTTAATAA+AGG	-	chr6_4:5024534-5024553	None:intergenic	20.0%
!!!	ATAAAAATTAGAAGTATGGT+AGG	-	chr6_4:5024725-5024744	None:intergenic	20.0%
!!	TTGACAAAATTATCGTAATA+TGG	-	chr6_4:5024846-5024865	None:intergenic	20.0%
!!!	TTGTATAGTAGTTAATGTTT+TGG	-	chr6_4:5024901-5024920	None:intergenic	20.0%
!!	AAAAATGAGCAAAAAAGTTT+GGG	-	chr6_4:5025688-5025707	None:intergenic	20.0%
!!	AAAAAATGAGCAAAAAAGTT+TGG	-	chr6_4:5025689-5025708	None:intergenic	20.0%
!!!	AAACTTTTTTGCTCATTTTT+TGG	+	chr6_4:5025688-5025707	Msa0972740:intron	20.0%
!!!	AAACCTGTATTTTTATTTTG+TGG	+	chr6_4:5025920-5025939	Msa0972740:intron	20.0%
!!!	AACCTGTATTTTTATTTTGT+GGG	+	chr6_4:5025921-5025940	Msa0972740:intron	20.0%
!!	TGCATTATATAATGTATCTA+TGG	-	chr6_4:5026129-5026148	None:intergenic	20.0%
!!	CTAAATTCAAACAAAATTCT+TGG	-	chr6_4:5026338-5026357	None:intergenic	20.0%
!!!	ATGGAAATATATTTTGCTAT+TGG	+	chr6_4:5026380-5026399	Msa0972740:three_prime_UTR	20.0%
!!!	ATATTTTGCTATTGGAAATT+CGG	+	chr6_4:5026388-5026407	Msa0972740:three_prime_UTR	20.0%
!	ATATTTATCTACTTAGAAGG+TGG	+	chr6_4:5024135-5024154	Msa0972740:intron	25.0%
!	GGAATCAAACAAAAATAGAA+AGG	-	chr6_4:5024361-5024380	None:intergenic	25.0%
!	TTCTGATAAGGATGTTTAAA+GGG	-	chr6_4:5024382-5024401	None:intergenic	25.0%
!	TTTCTGATAAGGATGTTTAA+AGG	-	chr6_4:5024383-5024402	None:intergenic	25.0%
!	TAAGAAAGAACTTTCTGATA+AGG	-	chr6_4:5024394-5024413	None:intergenic	25.0%
!	AGTTAGAGAAAAGAGAAATT+AGG	+	chr6_4:5024588-5024607	Msa0972740:intron	25.0%
!!	TCTAAAACTAAAAAGACCAA+TGG	+	chr6_4:5024617-5024636	Msa0972740:intron	25.0%
!!	TCTTTTCTATATCTTTCCAT+TGG	-	chr6_4:5024636-5024655	None:intergenic	25.0%
!!!	AAAAATCCTTGTTTGTTATG+AGG	-	chr6_4:5024788-5024807	None:intergenic	25.0%
!!	AAATATGAAGTGTTACGTTA+TGG	-	chr6_4:5024874-5024893	None:intergenic	25.0%
!	ACATATTAAAGACAGAGAAA+TGG	-	chr6_4:5025538-5025557	None:intergenic	25.0%
!!!	AAAATTTTAGAGGTGAAGTA+TGG	-	chr6_4:5025624-5025643	None:intergenic	25.0%
!	TATATAATGCACCTATCTAA+TGG	+	chr6_4:5026138-5026157	Msa0972740:three_prime_UTR	25.0%
!!	GTTATAAGGTTTAAAATTGC+TGG	+	chr6_4:5026197-5026216	Msa0972740:three_prime_UTR	25.0%
!	GAAATTAAATGGTATTGTCA+TGG	+	chr6_4:5026361-5026380	Msa0972740:three_prime_UTR	25.0%
!	ATATTTATCTACTTAGAAGG+TGG	+	chr6_4:5024135-5024154	Msa0972740:intron	25.0%
!	GGAATCAAACAAAAATAGAA+AGG	-	chr6_4:5024361-5024380	None:intergenic	25.0%
!	TTCTGATAAGGATGTTTAAA+GGG	-	chr6_4:5024382-5024401	None:intergenic	25.0%
!	TTTCTGATAAGGATGTTTAA+AGG	-	chr6_4:5024383-5024402	None:intergenic	25.0%
!	TAAGAAAGAACTTTCTGATA+AGG	-	chr6_4:5024394-5024413	None:intergenic	25.0%
!	AGTTAGAGAAAAGAGAAATT+AGG	+	chr6_4:5024588-5024607	Msa0972740:intron	25.0%
!!	TCTAAAACTAAAAAGACCAA+TGG	+	chr6_4:5024617-5024636	Msa0972740:intron	25.0%
!!	TCTTTTCTATATCTTTCCAT+TGG	-	chr6_4:5024636-5024655	None:intergenic	25.0%
!!!	AAAAATCCTTGTTTGTTATG+AGG	-	chr6_4:5024788-5024807	None:intergenic	25.0%
!!	AAATATGAAGTGTTACGTTA+TGG	-	chr6_4:5024874-5024893	None:intergenic	25.0%
!	ACATATTAAAGACAGAGAAA+TGG	-	chr6_4:5025538-5025557	None:intergenic	25.0%
!!!	AAAATTTTAGAGGTGAAGTA+TGG	-	chr6_4:5025624-5025643	None:intergenic	25.0%
!	TATATAATGCACCTATCTAA+TGG	+	chr6_4:5026138-5026157	Msa0972740:three_prime_UTR	25.0%
!!	GTTATAAGGTTTAAAATTGC+TGG	+	chr6_4:5026197-5026216	Msa0972740:three_prime_UTR	25.0%
!	GAAATTAAATGGTATTGTCA+TGG	+	chr6_4:5026361-5026380	Msa0972740:three_prime_UTR	25.0%
	TTTCTCTAACTTAGAACAAG+AGG	-	chr6_4:5024579-5024598	None:intergenic	30.0%
	GAGTGAATTTGACAAAATCA+CGG	-	chr6_4:5025000-5025019	None:intergenic	30.0%
	TAAGGTGGTGATTTAACTAA+AGG	-	chr6_4:5025183-5025202	None:intergenic	30.0%
	ACAAGTAGAGTTACTAAGTT+AGG	-	chr6_4:5025733-5025752	None:intergenic	30.0%
	TGCCCACAAAATAAAAATAC+AGG	-	chr6_4:5025926-5025945	None:intergenic	30.0%
!	TGTTTTGCCTAGAATGTTTT+TGG	-	chr6_4:5025978-5025997	None:intergenic	30.0%
	TATGGTAACAGAGAAAAATG+TGG	+	chr6_4:5026057-5026076	Msa0972740:CDS	30.0%
	TAATGTATCTATGGACACTT+AGG	-	chr6_4:5026120-5026139	None:intergenic	30.0%
	AAGCTTAGAAACCATTAGAT+AGG	-	chr6_4:5026152-5026171	None:intergenic	30.0%
	TCTATGTAATATGATCCATG+TGG	+	chr6_4:5026311-5026330	Msa0972740:three_prime_UTR	30.0%
	TTTCTCTAACTTAGAACAAG+AGG	-	chr6_4:5024579-5024598	None:intergenic	30.0%
	GAGTGAATTTGACAAAATCA+CGG	-	chr6_4:5025000-5025019	None:intergenic	30.0%
	TAAGGTGGTGATTTAACTAA+AGG	-	chr6_4:5025183-5025202	None:intergenic	30.0%
	ACAAGTAGAGTTACTAAGTT+AGG	-	chr6_4:5025733-5025752	None:intergenic	30.0%
	TGCCCACAAAATAAAAATAC+AGG	-	chr6_4:5025926-5025945	None:intergenic	30.0%
!	TGTTTTGCCTAGAATGTTTT+TGG	-	chr6_4:5025978-5025997	None:intergenic	30.0%
	TATGGTAACAGAGAAAAATG+TGG	+	chr6_4:5026057-5026076	Msa0972740:CDS	30.0%
	TAATGTATCTATGGACACTT+AGG	-	chr6_4:5026120-5026139	None:intergenic	30.0%
	AAGCTTAGAAACCATTAGAT+AGG	-	chr6_4:5026152-5026171	None:intergenic	30.0%
	TCTATGTAATATGATCCATG+TGG	+	chr6_4:5026311-5026330	Msa0972740:three_prime_UTR	30.0%
	GAGTAAAGATTATACCTTCG+TGG	-	chr6_4:5024088-5024107	None:intergenic	35.0%
	TGATGAAGATCTCAAGATAG+TGG	+	chr6_4:5024307-5024326	Msa0972740:CDS	35.0%
	TTATGAGGTTAGGGAAATGT+CGG	-	chr6_4:5024773-5024792	None:intergenic	35.0%
!!	CCTTGTTTGTTATGAGGTTA+GGG	-	chr6_4:5024782-5024801	None:intergenic	35.0%
!!	TCCTTGTTTGTTATGAGGTT+AGG	-	chr6_4:5024783-5024802	None:intergenic	35.0%
	TCTCGTCTATAGTAAAATCG+CGG	-	chr6_4:5024947-5024966	None:intergenic	35.0%
	TTGACAAAATCACGGTAACA+TGG	-	chr6_4:5024992-5025011	None:intergenic	35.0%
!!	AGTAATGTGATATTTGGTGC+AGG	+	chr6_4:5025080-5025099	Msa0972740:intron	35.0%
	GATTTAACTAAAGGTGGTGT+TGG	-	chr6_4:5025174-5025193	None:intergenic	35.0%
	ACAATAGGTGGTGATTGATA+TGG	-	chr6_4:5025279-5025298	None:intergenic	35.0%
	TCAATCACCACCTATTGTAA+AGG	+	chr6_4:5025281-5025300	Msa0972740:CDS	35.0%
	ACTATAGGTGGTGATTGATA+AGG	-	chr6_4:5025384-5025403	None:intergenic	35.0%
!!!	TAAGGAGGTGTTTTCACTAT+AGG	-	chr6_4:5025429-5025448	None:intergenic	35.0%
!!	ACTATTGGTGGTGATTGATA+AGG	-	chr6_4:5025447-5025466	None:intergenic	35.0%
	CATGATTTGACTATTGGAGT+AGG	-	chr6_4:5025498-5025517	None:intergenic	35.0%
	CTACTCCAATAGTCAAATCA+TGG	+	chr6_4:5025496-5025515	Msa0972740:CDS	35.0%
	TCCAATAGTCAAATCATGGA+AGG	+	chr6_4:5025500-5025519	Msa0972740:CDS	35.0%
	CCAATAGTCAAATCATGGAA+GGG	+	chr6_4:5025501-5025520	Msa0972740:CDS	35.0%
!!!	CTCATTTTTTGGTACTAGAG+AGG	+	chr6_4:5025699-5025718	Msa0972740:intron	35.0%
	ATAGGTGCCAAAAACATTCT+AGG	+	chr6_4:5025968-5025987	Msa0972740:CDS	35.0%
	AACAAAATTCTTGGACCACA+TGG	-	chr6_4:5026329-5026348	None:intergenic	35.0%
	GAGTAAAGATTATACCTTCG+TGG	-	chr6_4:5024088-5024107	None:intergenic	35.0%
	TGATGAAGATCTCAAGATAG+TGG	+	chr6_4:5024307-5024326	Msa0972740:CDS	35.0%
	TTATGAGGTTAGGGAAATGT+CGG	-	chr6_4:5024773-5024792	None:intergenic	35.0%
!!	CCTTGTTTGTTATGAGGTTA+GGG	-	chr6_4:5024782-5024801	None:intergenic	35.0%
!!	TCCTTGTTTGTTATGAGGTT+AGG	-	chr6_4:5024783-5024802	None:intergenic	35.0%
	TCTCGTCTATAGTAAAATCG+CGG	-	chr6_4:5024947-5024966	None:intergenic	35.0%
	TTGACAAAATCACGGTAACA+TGG	-	chr6_4:5024992-5025011	None:intergenic	35.0%
!!	AGTAATGTGATATTTGGTGC+AGG	+	chr6_4:5025080-5025099	Msa0972740:intron	35.0%
	GATTTAACTAAAGGTGGTGT+TGG	-	chr6_4:5025174-5025193	None:intergenic	35.0%
	ACAATAGGTGGTGATTGATA+TGG	-	chr6_4:5025279-5025298	None:intergenic	35.0%
	TCAATCACCACCTATTGTAA+AGG	+	chr6_4:5025281-5025300	Msa0972740:CDS	35.0%
	ACTATAGGTGGTGATTGATA+AGG	-	chr6_4:5025384-5025403	None:intergenic	35.0%
!!!	TAAGGAGGTGTTTTCACTAT+AGG	-	chr6_4:5025429-5025448	None:intergenic	35.0%
!!	ACTATTGGTGGTGATTGATA+AGG	-	chr6_4:5025447-5025466	None:intergenic	35.0%
	CATGATTTGACTATTGGAGT+AGG	-	chr6_4:5025498-5025517	None:intergenic	35.0%
	CTACTCCAATAGTCAAATCA+TGG	+	chr6_4:5025496-5025515	Msa0972740:CDS	35.0%
	TCCAATAGTCAAATCATGGA+AGG	+	chr6_4:5025500-5025519	Msa0972740:CDS	35.0%
	CCAATAGTCAAATCATGGAA+GGG	+	chr6_4:5025501-5025520	Msa0972740:CDS	35.0%
!!!	CTCATTTTTTGGTACTAGAG+AGG	+	chr6_4:5025699-5025718	Msa0972740:intron	35.0%
	ATAGGTGCCAAAAACATTCT+AGG	+	chr6_4:5025968-5025987	Msa0972740:CDS	35.0%
	AACAAAATTCTTGGACCACA+TGG	-	chr6_4:5026329-5026348	None:intergenic	35.0%
	CCCTAACCTCATAACAAACA+AGG	+	chr6_4:5024779-5024798	Msa0972740:intron	40.0%
!	TTAACTAAAGGTGGTGTTGG+TGG	-	chr6_4:5025171-5025190	None:intergenic	40.0%
	GGTGGTGATTTAACTAAAGG+TGG	-	chr6_4:5025180-5025199	None:intergenic	40.0%
!	TTCACTGGTGGTGATTGATA+AGG	-	chr6_4:5025201-5025220	None:intergenic	40.0%
	GATTTCACAATAGGTGGTGT+TGG	-	chr6_4:5025225-5025244	None:intergenic	40.0%
	GAAGGAGGTGATTTCACAAT+AGG	-	chr6_4:5025234-5025253	None:intergenic	40.0%
!	TATGGTGGTGATTTCACCAA+TGG	-	chr6_4:5025261-5025280	None:intergenic	40.0%
	ATAGGTGGTGATTGATATGG+TGG	-	chr6_4:5025276-5025295	None:intergenic	40.0%
	GATTTCACAATAGGTGGTGT+TGG	-	chr6_4:5025225-5025244	None:intergenic	40.0%
	GAAGGAGGTGATTTCACAAT+AGG	-	chr6_4:5025234-5025253	None:intergenic	40.0%
!	TAAGGTGGTGTTTTCACCAA+AGG	-	chr6_4:5025366-5025385	None:intergenic	40.0%
	ATAGGTGGTGATTGATAAGG+TGG	-	chr6_4:5025381-5025400	None:intergenic	40.0%
	TCAATCACCACCTATAGTGA+AGG	+	chr6_4:5025386-5025405	Msa0972740:CDS	40.0%
!!	ATTGGTGGTGATTGATAAGG+AGG	-	chr6_4:5025444-5025463	None:intergenic	40.0%
!!	ACAGGTGGTTTTACTATTGG+TGG	-	chr6_4:5025459-5025478	None:intergenic	40.0%
!!	GCAACAGGTGGTTTTACTAT+TGG	-	chr6_4:5025462-5025481	None:intergenic	40.0%
	GATTTGACTATTGGAGTAGG+TGG	-	chr6_4:5025495-5025514	None:intergenic	40.0%
	CCCTTCCATGATTTGACTAT+TGG	-	chr6_4:5025504-5025523	None:intergenic	40.0%
	GAGTTACTAAGTTAGGCATG+TGG	-	chr6_4:5025726-5025745	None:intergenic	40.0%
	GCATTCCACTATGTGGTTAT+AGG	+	chr6_4:5025950-5025969	Msa0972740:CDS	40.0%
	TGTTACCATAAGTTCCTGGA+GGG	-	chr6_4:5026047-5026066	None:intergenic	40.0%
	TCTCTGTTACCATAAGTTCC+TGG	-	chr6_4:5026051-5026070	None:intergenic	40.0%
	TGGCAAGTGTTACACTGATA+TGG	+	chr6_4:5026077-5026096	Msa0972740:CDS	40.0%
	TACACTGATATGGTGACTCA+TGG	+	chr6_4:5026087-5026106	Msa0972740:CDS	40.0%
	CCCTAACCTCATAACAAACA+AGG	+	chr6_4:5024779-5024798	Msa0972740:intron	40.0%
!	TTAACTAAAGGTGGTGTTGG+TGG	-	chr6_4:5025171-5025190	None:intergenic	40.0%
	GGTGGTGATTTAACTAAAGG+TGG	-	chr6_4:5025180-5025199	None:intergenic	40.0%
!	TTCACTGGTGGTGATTGATA+AGG	-	chr6_4:5025201-5025220	None:intergenic	40.0%
	GATTTCACAATAGGTGGTGT+TGG	-	chr6_4:5025225-5025244	None:intergenic	40.0%
	GAAGGAGGTGATTTCACAAT+AGG	-	chr6_4:5025234-5025253	None:intergenic	40.0%
!	TATGGTGGTGATTTCACCAA+TGG	-	chr6_4:5025261-5025280	None:intergenic	40.0%
	ATAGGTGGTGATTGATATGG+TGG	-	chr6_4:5025276-5025295	None:intergenic	40.0%
	GATTTCACAATAGGTGGTGT+TGG	-	chr6_4:5025225-5025244	None:intergenic	40.0%
	GAAGGAGGTGATTTCACAAT+AGG	-	chr6_4:5025234-5025253	None:intergenic	40.0%
!	TAAGGTGGTGTTTTCACCAA+AGG	-	chr6_4:5025366-5025385	None:intergenic	40.0%
	ATAGGTGGTGATTGATAAGG+TGG	-	chr6_4:5025381-5025400	None:intergenic	40.0%
	TCAATCACCACCTATAGTGA+AGG	+	chr6_4:5025386-5025405	Msa0972740:CDS	40.0%
!!	ATTGGTGGTGATTGATAAGG+AGG	-	chr6_4:5025444-5025463	None:intergenic	40.0%
!!	ACAGGTGGTTTTACTATTGG+TGG	-	chr6_4:5025459-5025478	None:intergenic	40.0%
!!	GCAACAGGTGGTTTTACTAT+TGG	-	chr6_4:5025462-5025481	None:intergenic	40.0%
	GATTTGACTATTGGAGTAGG+TGG	-	chr6_4:5025495-5025514	None:intergenic	40.0%
	CCCTTCCATGATTTGACTAT+TGG	-	chr6_4:5025504-5025523	None:intergenic	40.0%
	GAGTTACTAAGTTAGGCATG+TGG	-	chr6_4:5025726-5025745	None:intergenic	40.0%
	GCATTCCACTATGTGGTTAT+AGG	+	chr6_4:5025950-5025969	Msa0972740:CDS	40.0%
	TGTTACCATAAGTTCCTGGA+GGG	-	chr6_4:5026047-5026066	None:intergenic	40.0%
	TCTCTGTTACCATAAGTTCC+TGG	-	chr6_4:5026051-5026070	None:intergenic	40.0%
	TGGCAAGTGTTACACTGATA+TGG	+	chr6_4:5026077-5026096	Msa0972740:CDS	40.0%
	TACACTGATATGGTGACTCA+TGG	+	chr6_4:5026087-5026106	Msa0972740:CDS	40.0%
!!	GGTGTTACTATAGGACTTGG+TGG	-	chr6_4:5025129-5025148	None:intergenic	45.0%
!!	GGTGGTGTTACTATAGGACT+TGG	-	chr6_4:5025132-5025151	None:intergenic	45.0%
!!	GGAGAAGGTGGTGTTACTAT+AGG	-	chr6_4:5025138-5025157	None:intergenic	45.0%
!	ACTGGTGGTGATTGATAAGG+TGG	-	chr6_4:5025198-5025217	None:intergenic	45.0%
!!	ATAGGTGGTGTTGGTTTCAC+TGG	-	chr6_4:5025216-5025235	None:intergenic	45.0%
	GGAGGTGATTTCACAATAGG+TGG	-	chr6_4:5025231-5025250	None:intergenic	45.0%
!	GATTTCACCAATGGTGGTGA+AGG	-	chr6_4:5025252-5025271	None:intergenic	45.0%
!!	GAAGGTGCCTTTACAATAGG+TGG	-	chr6_4:5025291-5025310	None:intergenic	45.0%
!!	GGAGAAGGTGCCTTTACAAT+AGG	-	chr6_4:5025294-5025313	None:intergenic	45.0%
	GGAGGTGATTTCACAATAGG+TGG	-	chr6_4:5025231-5025250	None:intergenic	45.0%
!	GTTTTCACCAAAGGAGGAGA+AGG	-	chr6_4:5025357-5025376	None:intergenic	45.0%
	TTCACTATAGGTGGAGGAGT+TGG	-	chr6_4:5025417-5025436	None:intergenic	45.0%
!	GGTGTTTTCACTATAGGTGG+AGG	-	chr6_4:5025423-5025442	None:intergenic	45.0%
!!!	GGAGGTGTTTTCACTATAGG+TGG	-	chr6_4:5025426-5025445	None:intergenic	45.0%
	TTGACTATTGGAGTAGGTGG+TGG	-	chr6_4:5025492-5025511	None:intergenic	45.0%
	GCAGATTGCATTCCACTATG+TGG	+	chr6_4:5025943-5025962	Msa0972740:intron	45.0%
	TGGCACCTATAACCACATAG+TGG	-	chr6_4:5025958-5025977	None:intergenic	45.0%
!!	CATGCATGACTTGTTGTGAC+CGG	+	chr6_4:5026010-5026029	Msa0972740:CDS	45.0%
	CTGTTACCATAAGTTCCTGG+AGG	-	chr6_4:5026048-5026067	None:intergenic	45.0%
!!	GGTGTTACTATAGGACTTGG+TGG	-	chr6_4:5025129-5025148	None:intergenic	45.0%
!!	GGTGGTGTTACTATAGGACT+TGG	-	chr6_4:5025132-5025151	None:intergenic	45.0%
!!	GGAGAAGGTGGTGTTACTAT+AGG	-	chr6_4:5025138-5025157	None:intergenic	45.0%
!	ACTGGTGGTGATTGATAAGG+TGG	-	chr6_4:5025198-5025217	None:intergenic	45.0%
!!	ATAGGTGGTGTTGGTTTCAC+TGG	-	chr6_4:5025216-5025235	None:intergenic	45.0%
	GGAGGTGATTTCACAATAGG+TGG	-	chr6_4:5025231-5025250	None:intergenic	45.0%
!	GATTTCACCAATGGTGGTGA+AGG	-	chr6_4:5025252-5025271	None:intergenic	45.0%
!!	GAAGGTGCCTTTACAATAGG+TGG	-	chr6_4:5025291-5025310	None:intergenic	45.0%
!!	GGAGAAGGTGCCTTTACAAT+AGG	-	chr6_4:5025294-5025313	None:intergenic	45.0%
	GGAGGTGATTTCACAATAGG+TGG	-	chr6_4:5025231-5025250	None:intergenic	45.0%
!	GTTTTCACCAAAGGAGGAGA+AGG	-	chr6_4:5025357-5025376	None:intergenic	45.0%
	TTCACTATAGGTGGAGGAGT+TGG	-	chr6_4:5025417-5025436	None:intergenic	45.0%
!	GGTGTTTTCACTATAGGTGG+AGG	-	chr6_4:5025423-5025442	None:intergenic	45.0%
!!!	GGAGGTGTTTTCACTATAGG+TGG	-	chr6_4:5025426-5025445	None:intergenic	45.0%
	TTGACTATTGGAGTAGGTGG+TGG	-	chr6_4:5025492-5025511	None:intergenic	45.0%
	GCAGATTGCATTCCACTATG+TGG	+	chr6_4:5025943-5025962	Msa0972740:intron	45.0%
	TGGCACCTATAACCACATAG+TGG	-	chr6_4:5025958-5025977	None:intergenic	45.0%
!!	CATGCATGACTTGTTGTGAC+CGG	+	chr6_4:5026010-5026029	Msa0972740:CDS	45.0%
	CTGTTACCATAAGTTCCTGG+AGG	-	chr6_4:5026048-5026067	None:intergenic	45.0%
!!!	TTTTTTTTTTAAAGAAAATT+AGG	+	chr6_4:5024806-5024825	Msa0972740:intron	5.0%
!!!	TTTTTTTTTTAAAGAAAATT+AGG	+	chr6_4:5024806-5024825	Msa0972740:intron	5.0%
!	TTTTCTTGTGCTCGCCACGA+AGG	+	chr6_4:5024071-5024090	Msa0972740:CDS	50.0%
!!	TAGGACTTGGTGGAGCTGTA+GGG	-	chr6_4:5025119-5025138	None:intergenic	50.0%
!!	ATAGGACTTGGTGGAGCTGT+AGG	-	chr6_4:5025120-5025139	None:intergenic	50.0%
	AACACCACCTTCTCCAGTGA+AGG	+	chr6_4:5025143-5025162	Msa0972740:CDS	50.0%
	ATCACCTCCTTCACCACCAT+TGG	+	chr6_4:5025242-5025261	Msa0972740:CDS	50.0%
!	TTCACCAATGGTGGTGAAGG+AGG	-	chr6_4:5025249-5025268	None:intergenic	50.0%
	GGTGGTGATTTCACCAATGG+TGG	-	chr6_4:5025258-5025277	None:intergenic	50.0%
	GGTTTCACTAGAGGAGGAGA+AGG	-	chr6_4:5025309-5025328	None:intergenic	50.0%
!!	GGTGTTGGTTTCACTAGAGG+AGG	-	chr6_4:5025315-5025334	None:intergenic	50.0%
!!	GGTGGTGTTGGTTTCACTAG+AGG	-	chr6_4:5025318-5025337	None:intergenic	50.0%
	ATCACCTCCTTCTCCTCCTT+TGG	+	chr6_4:5025347-5025366	Msa0972740:CDS	50.0%
	TTCACCAAAGGAGGAGAAGG+AGG	-	chr6_4:5025354-5025373	None:intergenic	50.0%
!	GGTGGTGTTTTCACCAAAGG+AGG	-	chr6_4:5025363-5025382	None:intergenic	50.0%
!!	GTTGGTGGTGCCTTCACTAT+AGG	-	chr6_4:5025399-5025418	None:intergenic	50.0%
	ACTATAGGTGGAGGAGTTGG+TGG	-	chr6_4:5025414-5025433	None:intergenic	50.0%
!!	ATTGGAGTAGGTGGTGGAGA+TGG	-	chr6_4:5025486-5025505	None:intergenic	50.0%
	TGTGTCCCTCCAGGAACTTA+TGG	+	chr6_4:5026039-5026058	Msa0972740:CDS	50.0%
!	TTTTCTTGTGCTCGCCACGA+AGG	+	chr6_4:5024071-5024090	Msa0972740:CDS	50.0%
!!	TAGGACTTGGTGGAGCTGTA+GGG	-	chr6_4:5025119-5025138	None:intergenic	50.0%
!!	ATAGGACTTGGTGGAGCTGT+AGG	-	chr6_4:5025120-5025139	None:intergenic	50.0%
	AACACCACCTTCTCCAGTGA+AGG	+	chr6_4:5025143-5025162	Msa0972740:CDS	50.0%
	ATCACCTCCTTCACCACCAT+TGG	+	chr6_4:5025242-5025261	Msa0972740:CDS	50.0%
!	TTCACCAATGGTGGTGAAGG+AGG	-	chr6_4:5025249-5025268	None:intergenic	50.0%
	GGTGGTGATTTCACCAATGG+TGG	-	chr6_4:5025258-5025277	None:intergenic	50.0%
	GGTTTCACTAGAGGAGGAGA+AGG	-	chr6_4:5025309-5025328	None:intergenic	50.0%
!!	GGTGTTGGTTTCACTAGAGG+AGG	-	chr6_4:5025315-5025334	None:intergenic	50.0%
!!	GGTGGTGTTGGTTTCACTAG+AGG	-	chr6_4:5025318-5025337	None:intergenic	50.0%
	ATCACCTCCTTCTCCTCCTT+TGG	+	chr6_4:5025347-5025366	Msa0972740:CDS	50.0%
	TTCACCAAAGGAGGAGAAGG+AGG	-	chr6_4:5025354-5025373	None:intergenic	50.0%
!	GGTGGTGTTTTCACCAAAGG+AGG	-	chr6_4:5025363-5025382	None:intergenic	50.0%
!!	GTTGGTGGTGCCTTCACTAT+AGG	-	chr6_4:5025399-5025418	None:intergenic	50.0%
	ACTATAGGTGGAGGAGTTGG+TGG	-	chr6_4:5025414-5025433	None:intergenic	50.0%
!!	ATTGGAGTAGGTGGTGGAGA+TGG	-	chr6_4:5025486-5025505	None:intergenic	50.0%
	TGTGTCCCTCCAGGAACTTA+TGG	+	chr6_4:5026039-5026058	Msa0972740:CDS	50.0%
!!	GGTGGTGTTGGTTTCACTGG+TGG	-	chr6_4:5025213-5025232	None:intergenic	55.0%
	GGTGGTGCCTTCACTATAGG+TGG	-	chr6_4:5025396-5025415	None:intergenic	55.0%
	CTGGAGGGACACATTTGCAC+CGG	-	chr6_4:5026032-5026051	None:intergenic	55.0%
!!	GGTGGTGTTGGTTTCACTGG+TGG	-	chr6_4:5025213-5025232	None:intergenic	55.0%
	GGTGGTGCCTTCACTATAGG+TGG	-	chr6_4:5025396-5025415	None:intergenic	55.0%
	CTGGAGGGACACATTTGCAC+CGG	-	chr6_4:5026032-5026051	None:intergenic	55.0%
	GGTGCCTTCACTGGAGAAGG+TGG	-	chr6_4:5025150-5025169	None:intergenic	60.0%
	GGTGGTGCCTTCACTGGAGA+AGG	-	chr6_4:5025153-5025172	None:intergenic	60.0%
!!	GGTGTTGGTGGTGCCTTCAC+TGG	-	chr6_4:5025159-5025178	None:intergenic	60.0%
	GGTGGAGATGGAGCAACAGG+TGG	-	chr6_4:5025474-5025493	None:intergenic	60.0%
!!	GGTGGTGGAGATGGAGCAAC+AGG	-	chr6_4:5025477-5025496	None:intergenic	60.0%
	CGGTGCAAATGTGTCCCTCC+AGG	+	chr6_4:5026030-5026049	Msa0972740:CDS	60.0%
	GGTGCCTTCACTGGAGAAGG+TGG	-	chr6_4:5025150-5025169	None:intergenic	60.0%
	GGTGGTGCCTTCACTGGAGA+AGG	-	chr6_4:5025153-5025172	None:intergenic	60.0%
!!	GGTGTTGGTGGTGCCTTCAC+TGG	-	chr6_4:5025159-5025178	None:intergenic	60.0%
	GGTGGAGATGGAGCAACAGG+TGG	-	chr6_4:5025474-5025493	None:intergenic	60.0%
!!	GGTGGTGGAGATGGAGCAAC+AGG	-	chr6_4:5025477-5025496	None:intergenic	60.0%
	CGGTGCAAATGTGTCCCTCC+AGG	+	chr6_4:5026030-5026049	Msa0972740:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr6_4	gene	5024024	5026466	5024024	ID=Msa0972740;Name=Msa0972740
chr6_4	mRNA	5024024	5026466	5024024	ID=Msa0972740-mRNA-1;Parent=Msa0972740;Name=Msa0972740-mRNA-1;_AED=0.28;_eAED=0.28;_QI=0\|1\|0.75\|1\|1\|1\|4\|335\|235
chr6_4	exon	5024024	5024092	5024024	ID=Msa0972740-mRNA-1:exon:2180;Parent=Msa0972740-mRNA-1
chr6_4	exon	5024296	5024328	5024296	ID=Msa0972740-mRNA-1:exon:2181;Parent=Msa0972740-mRNA-1
chr6_4	exon	5025102	5025522	5025102	ID=Msa0972740-mRNA-1:exon:2182;Parent=Msa0972740-mRNA-1
chr6_4	exon	5025947	5026466	5025947	ID=Msa0972740-mRNA-1:exon:2183;Parent=Msa0972740-mRNA-1
chr6_4	CDS	5024024	5024092	5024024	ID=Msa0972740-mRNA-1:cds;Parent=Msa0972740-mRNA-1
chr6_4	CDS	5024296	5024328	5024296	ID=Msa0972740-mRNA-1:cds;Parent=Msa0972740-mRNA-1
chr6_4	CDS	5025102	5025522	5025102	ID=Msa0972740-mRNA-1:cds;Parent=Msa0972740-mRNA-1
chr6_4	CDS	5025947	5026131	5025947	ID=Msa0972740-mRNA-1:cds;Parent=Msa0972740-mRNA-1
chr6_4	three_prime_UTR	5026132	5026466	5026132	ID=Msa0972740-mRNA-1:three_prime_utr;Parent=Msa0972740-mRNA-1

Gene Sequence

>Msa0972740

ATGGCTTCAAAATCCATTTTTCTTCTAAGCATTTTTCTTCTAAGCATTTTTCTTGTGCTCGCCACGAAGGTTTATTCTTATGATGAAGATCTCAAGATAGTGGTGAACTATGCAAACCCTACAGCTCCACCAAGTCCTATAGTAACACCACCTTCTCCAGTGAAGGCACCACCAACACCACCTTTAGTTAAATCACCACCTTATCAATCACCACCAGTGAAACCAACACCACCTATTGTGAAATCACCTCCTTCACCACCATTGGTGAAATCACCACCATATCAATCACCACCTATTGTAAAGGCACCTTCTCCTCCTCTAGTGAAACCAACACCACCTATTGTGAAATCACCTCCTTCTCCTCCTTTGGTGAAAACACCACCTTATCAATCACCACCTATAGTGAAGGCACCACCAACTCCTCCACCTATAGTGAAAACACCTCCTTATCAATCACCACCAATAGTAAAACCACCTGTTGCTCCATCTCCACCACCTACTCCAATAGTCAAATCATGGAAGGATTGCATTCCACTATGTGGTTATAGGTGCCAAAAACATTCTAGGCAAAACACATGCATAAGAGCATGCATGACTTGTTGTGACCGGTGCAAATGTGTCCCTCCAGGAACTTATGGTAACAGAGAAAAATGTGGCAAGTGTTACACTGATATGGTGACTCATGGCAATAGACCTAAGTGTCCATAG

Protein sequence

>Msa0972740

MASKSIFLLSIFLLSIFLVLATKVYSYDEDLKIVVNYANPTAPPSPIVTPPSPVKAPPTPPLVKSPPYQSPPVKPTPPIVKSPPSPPLVKSPPYQSPPIVKAPSPPLVKPTPPIVKSPPSPPLVKTPPYQSPPIVKAPPTPPPIVKTPPYQSPPIVKPPVAPSPPPTPIVKSWKDCIPLCGYRCQKHSRQNTCIRACMTCCDRCKCVPPGTYGNREKCGKCYTDMVTHGNRPKCP*