AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0140130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0140130 MtrunA17_Chr3g0109391 98.471 850 12 1 1 850 1 849 0.0 1732
Msa0140130 MtrunA17_Chr5g0433301 82.884 853 131 11 1 850 1 841 0.0 1398
Msa0140130 MtrunA17_Chr8g0376771 78.947 456 85 6 1 453 1 448 0.0 731
Msa0140130 MtrunA17_Chr4g0070181 65.217 414 134 8 16 424 13 421 3.59e-171 525
Msa0140130 MtrunA17_Chr4g0070181 52.294 109 52 0 704 812 974 1082 1.60e-29 126
Msa0140130 MtrunA17_Chr1g0156321 68.120 367 113 3 18 383 35 398 2.14e-168 510
Msa0140130 MtrunA17_Chr1g0156321 46.825 126 64 2 706 829 735 859 5.02e-26 115
Msa0140130 MtrunA17_Chr2g0301251 64.251 414 137 7 16 424 13 420 1.52e-166 513
Msa0140130 MtrunA17_Chr2g0301251 61.364 88 34 0 725 812 987 1074 9.14e-30 127
Msa0140130 MtrunA17_Chr8g0389081 52.212 565 223 13 9 553 21 558 1.41e-156 486
Msa0140130 MtrunA17_Chr8g0389081 64.773 88 31 0 725 812 986 1073 4.77e-31 131
Msa0140130 MtrunA17_Chr2g0276781 54.545 352 155 4 16 366 13 360 8.76e-126 393
Msa0140130 MtrunA17_Chr2g0276781 39.080 87 51 2 727 812 550 635 1.27e-13 74.7
Msa0140130 MtrunA17_Chr8g0385791 46.154 442 225 6 9 448 42 472 4.75e-123 391
Msa0140130 MtrunA17_Chr8g0385791 41.441 111 61 4 704 812 690 798 1.10e-16 85.1
Msa0140130 MtrunA17_Chr8g0346711 48.711 388 183 6 9 385 12 394 8.42e-118 372
Msa0140130 MtrunA17_Chr8g0346711 43.820 89 47 2 725 812 559 645 1.64e-14 77.8
Msa0140130 MtrunA17_Chr2g0326281 50.959 365 152 7 26 366 56 417 1.16e-111 360
Msa0140130 MtrunA17_Chr2g0326281 41.525 118 60 3 696 812 674 783 8.16e-20 95.1
Msa0140130 MtrunA17_Chr4g0029671 50.678 369 160 6 26 379 54 415 1.64e-111 359
Msa0140130 MtrunA17_Chr4g0029671 46.512 86 44 2 728 812 667 751 1.03e-17 88.2
Msa0140130 MtrunA17_Chr4g0009751 48.819 381 187 6 22 400 15 389 1.29e-110 352
Msa0140130 MtrunA17_Chr7g0239061 45.154 423 215 10 16 429 4 418 4.72e-110 352
Msa0140130 MtrunA17_Chr7g0239061 39.362 94 54 2 720 812 566 657 6.23e-14 75.9
Msa0140130 MtrunA17_Chr2g0282961 48.187 386 162 7 22 389 51 416 8.97e-108 344
Msa0140130 MtrunA17_Chr4g0046371 47.606 376 171 6 17 378 31 394 2.66e-107 345
Msa0140130 MtrunA17_Chr2g0326761 40.394 406 190 9 20 382 5 401 2.17e-83 281
Msa0140130 MtrunA17_Chr1g0199681 40.052 387 185 10 20 368 88 465 2.44e-80 273
Msa0140130 MtrunA17_Chr4g0028971 38.186 419 201 9 19 389 5 413 3.69e-78 267
Msa0140130 MtrunA17_Chr1g0181211 35.204 392 202 5 20 366 21 405 2.79e-72 251
Msa0140130 MtrunA17_Chr3g0115271 36.092 435 231 8 23 420 16 440 1.97e-67 235
Msa0140130 MtrunA17_Chr7g0264171 34.750 400 200 9 21 369 26 415 3.93e-64 226
Msa0140130 MtrunA17_Chr5g0424931 33.023 430 238 11 23 420 16 427 8.97e-59 209
Msa0140130 MtrunA17_Chr7g0264161 37.097 310 182 6 35 340 1 301 2.05e-58 201
Msa0140130 MtrunA17_Chr5g0417281 31.842 380 230 9 23 394 8 366 7.14e-56 201
Msa0140130 MtrunA17_Chr5g0436761 33.884 363 214 9 19 373 5 349 2.93e-55 197
Msa0140130 MtrunA17_Chr8g0356211 40.664 241 128 6 138 369 2 236 2.90e-53 187
Msa0140130 MtrunA17_Chr1g0178011 32.432 370 218 13 21 379 7 355 8.68e-51 185
Msa0140130 MtrunA17_Chr2g0285461 47.059 221 94 5 652 850 689 908 8.89e-46 177
Msa0140130 MtrunA17_Chr2g0277461 31.728 353 219 9 26 373 13 348 2.01e-44 167
Msa0140130 MtrunA17_Chr2g0289221 34.146 328 177 12 26 340 20 321 4.44e-44 163
Msa0140130 MtrunA17_Chr5g0419811 61.940 134 30 2 586 698 27 160 1.05e-42 153
Msa0140130 MtrunA17_Chr5g0417211 31.548 336 182 10 23 340 9 314 8.08e-42 158
Msa0140130 MtrunA17_Chr5g0424741 27.642 369 229 7 23 360 9 370 2.12e-37 147
Msa0140130 MtrunA17_Chr5g0424801 29.155 343 222 9 23 360 9 335 5.06e-34 134
Msa0140130 MtrunA17_Chr2g0277531 29.712 313 186 11 23 323 17 307 6.26e-34 132
Msa0140130 MtrunA17_Chr5g0425661 35.437 206 121 3 25 226 36 233 1.15e-33 129
Msa0140130 MtrunA17_Chr5g0425261 29.155 343 222 9 23 360 9 335 7.35e-33 131
Msa0140130 MtrunA17_Chr1g0156301 35.606 132 60 2 707 829 151 266 1.17e-16 80.9
Msa0140130 MtrunA17_Chr5g0424791 34.211 152 85 6 78 226 12 151 3.84e-15 73.6
Msa0140130 MtrunA17_Chr1g0156311 41.593 113 33 2 248 360 1 80 3.36e-13 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0140130 AT5G37020.1 69.581 835 210 15 1 825 1 801 0.0 1090
Msa0140130 AT5G37020.2 69.451 802 206 14 1 792 1 773 0.0 1045
Msa0140130 AT5G37020.3 67.255 736 201 14 100 825 1 706 0.0 907
Msa0140130 AT1G30330.1 76.398 483 97 5 1 476 1 473 0.0 741
Msa0140130 AT1G30330.1 53.646 192 76 4 640 819 699 889 8.82e-52 196
Msa0140130 AT1G30330.3 76.398 483 99 5 1 476 1 475 0.0 741
Msa0140130 AT1G30330.3 53.646 192 76 4 640 819 701 891 8.21e-52 196
Msa0140130 AT1G30330.2 76.398 483 99 5 1 476 1 475 0.0 741
Msa0140130 AT1G30330.2 53.646 192 76 4 640 819 701 891 8.21e-52 196
Msa0140130 AT1G19850.1 42.679 881 390 27 17 819 45 888 0.0 579
Msa0140130 AT1G19850.2 42.679 881 390 27 17 819 34 877 0.0 578
Msa0140130 AT1G19220.1 61.098 437 160 8 1 434 1 430 7.23e-167 513
Msa0140130 AT1G19220.1 61.458 96 34 1 725 817 959 1054 8.14e-30 127
Msa0140130 AT5G20730.2 62.136 412 145 7 18 424 16 421 8.66e-161 499
Msa0140130 AT5G20730.2 34.127 252 131 7 591 812 879 1125 2.11e-29 126
Msa0140130 AT5G20730.3 61.985 413 145 8 18 424 16 422 5.46e-159 494
Msa0140130 AT5G20730.3 34.127 252 131 7 591 812 880 1126 2.38e-29 126
Msa0140130 AT5G20730.1 61.985 413 145 8 18 424 16 422 7.39e-159 494
Msa0140130 AT5G20730.1 34.127 252 131 7 591 812 880 1126 2.18e-29 126
Msa0140130 AT5G62000.2 48.815 422 200 5 3 417 31 443 2.76e-128 406
Msa0140130 AT5G62000.2 41.935 93 52 2 721 812 730 821 1.63e-15 81.6
Msa0140130 AT5G62000.5 48.815 422 200 5 3 417 31 443 2.76e-128 406
Msa0140130 AT5G62000.5 41.935 93 52 2 721 812 730 821 1.63e-15 81.6
Msa0140130 AT5G62000.3 48.815 422 200 5 3 417 31 443 2.76e-128 406
Msa0140130 AT5G62000.3 41.935 93 52 2 721 812 730 821 1.63e-15 81.6
Msa0140130 AT5G62000.1 48.815 422 200 5 3 417 31 443 2.76e-128 406
Msa0140130 AT5G62000.1 41.935 93 52 2 721 812 730 821 1.63e-15 81.6
Msa0140130 AT5G62000.4 48.815 422 200 5 3 417 31 443 6.33e-128 405
Msa0140130 AT5G62000.4 38.462 117 67 3 721 833 730 845 1.33e-15 82.0
Msa0140130 AT1G59750.4 52.231 381 169 5 16 390 12 385 1.32e-124 390
Msa0140130 AT1G59750.4 41.379 87 49 2 727 812 540 625 8.10e-16 82.4
Msa0140130 AT1G59750.1 52.231 381 169 5 16 390 12 385 1.49e-124 390
Msa0140130 AT1G59750.1 41.379 87 49 2 727 812 545 630 8.09e-16 82.4
Msa0140130 AT1G59750.3 52.231 381 169 5 16 390 12 385 1.49e-124 390
Msa0140130 AT1G59750.3 41.379 87 49 2 727 812 545 630 8.09e-16 82.4
Msa0140130 AT1G59750.2 52.231 381 169 5 16 390 12 385 1.57e-124 390
Msa0140130 AT1G59750.2 41.379 87 49 2 727 812 542 627 8.19e-16 82.4
Msa0140130 AT5G60450.2 52.618 382 163 7 18 389 33 406 9.19e-120 380
Msa0140130 AT5G60450.2 44.318 88 47 2 728 814 645 731 9.55e-18 88.6
Msa0140130 AT5G60450.1 53.050 377 159 7 23 389 62 430 3.50e-119 380
Msa0140130 AT5G60450.1 44.318 88 47 2 728 814 669 755 1.03e-17 88.6
Msa0140130 AT3G61830.1 53.890 347 152 7 23 367 22 362 7.19e-118 370
Msa0140130 AT3G61830.1 41.772 79 44 1 734 812 500 576 5.14e-12 70.1
Msa0140130 AT2G46530.1 51.966 356 162 7 17 370 12 360 2.62e-115 364
Msa0140130 AT2G46530.1 34.127 126 78 4 693 817 461 582 5.13e-12 70.1
Msa0140130 AT2G46530.3 51.966 356 162 7 17 370 33 381 6.47e-115 363
Msa0140130 AT2G46530.3 34.127 126 78 4 693 817 482 603 6.39e-12 69.7
Msa0140130 AT2G33860.1 49.582 359 151 7 16 361 48 389 2.36e-109 348
Msa0140130 AT4G23980.1 49.215 382 170 9 17 389 5 371 2.44e-106 342
Msa0140130 AT4G23980.1 42.308 78 43 1 735 812 535 610 2.41e-13 74.3
Msa0140130 AT4G23980.2 49.731 372 163 9 17 379 5 361 1.15e-105 340
Msa0140130 AT4G23980.2 42.308 78 43 1 735 812 533 608 2.30e-13 74.3
Msa0140130 AT3G61830.2 52.848 316 141 7 54 367 2 311 1.55e-101 326
Msa0140130 AT3G61830.2 41.772 79 44 1 734 812 449 525 4.21e-12 70.1
Msa0140130 AT1G34410.1 42.440 377 195 7 18 386 19 381 1.36e-90 299
Msa0140130 AT1G35540.1 42.735 351 182 6 18 363 19 355 4.91e-88 292
Msa0140130 AT1G35240.1 42.077 366 193 6 18 378 19 370 6.65e-88 291
Msa0140130 AT1G34310.1 42.623 366 191 6 18 378 19 370 7.80e-88 291
Msa0140130 AT1G35520.1 41.867 375 196 7 20 386 21 381 8.36e-86 285
Msa0140130 AT2G33860.2 56.897 232 99 1 130 361 2 232 4.20e-84 276
Msa0140130 AT1G34170.1 42.775 346 185 7 20 362 19 354 1.68e-83 276
Msa0140130 AT1G34390.1 41.645 377 196 8 18 386 19 379 2.89e-81 273
Msa0140130 AT2G46530.2 52.610 249 114 3 122 370 29 273 2.92e-81 271
Msa0140130 AT2G46530.2 34.127 126 78 4 693 817 374 495 3.13e-12 70.5
Msa0140130 AT4G30080.1 39.344 427 185 15 17 389 10 416 4.88e-80 272
Msa0140130 AT2G28350.2 38.889 396 183 9 19 366 3 387 7.38e-79 269
Msa0140130 AT2G28350.1 38.889 396 183 9 19 366 3 387 1.10e-78 269
Msa0140130 AT1G34170.2 39.306 346 171 6 20 362 19 328 4.85e-73 248
Msa0140130 AT1G34170.3 39.306 346 171 6 20 362 19 328 2.45e-72 248
Msa0140130 AT1G77850.1 33.333 405 224 9 23 392 16 409 1.13e-55 202
Msa0140130 AT1G77850.2 33.333 405 224 9 23 392 16 409 1.75e-55 202
Msa0140130 AT1G43950.1 42.396 217 107 5 18 229 19 222 8.31e-48 169

Find 274 sgRNAs with CRISPR-Local

Find 578 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACTGGGTCATGCTGTTTC+TGG 0.051747 1_3:-74285650 Msa0140130:five_prime_UTR
TGAAGTTAATTGAAAGTTTA+TGG 0.154138 1_3:-74285403 Msa0140130:five_prime_UTR
CACCCGAGAGAACATGATTT+TGG 0.164979 1_3:+74279021 None:intergenic
GAATCTCACCACATTGTTTC+TGG 0.168706 1_3:-74278295 Msa0140130:CDS
AGAGAGAAAGAGAGAATTAA+AGG 0.203151 1_3:+74285844 None:intergenic
ACTGGTGCATCAACACAATT+AGG 0.225076 1_3:-74278930 Msa0140130:CDS
TGAGAAGAATCAGCTTCTTT+TGG 0.242248 1_3:-74282337 Msa0140130:CDS
AAAGTTTATGGCTTTAAGTT+AGG 0.246128 1_3:-74285391 Msa0140130:five_prime_UTR
TACATTTCTTCCTATGGAAT+TGG 0.251116 1_3:-74284414 Msa0140130:CDS
TTATGTATGATAAGAAATTT+AGG 0.258432 1_3:-74278085 Msa0140130:three_prime_UTR
ACTCAATAGTACTATAAATT+TGG 0.259046 1_3:+74285355 None:intergenic
GACAGCCACGGGTGTCATTA+TGG 0.271992 1_3:-74280779 Msa0140130:CDS
TACATTGGGAATGTTGTTAA+AGG 0.279523 1_3:+74280747 None:intergenic
TTTCTGTTGGTATGCGCTTC+AGG 0.283489 1_3:-74282026 Msa0140130:CDS
GGCTCAGGACAAAGGCTTAA+TGG 0.289324 1_3:-74278325 Msa0140130:CDS
ATGTCACATGCACAATATTC+TGG 0.295246 1_3:-74279086 Msa0140130:CDS
ATGTTTGAATCCAGAAAATC+TGG 0.318518 1_3:+74279296 None:intergenic
GAAAGAGAAAGAAGATATAA+AGG 0.319808 1_3:-74285324 Msa0140130:five_prime_UTR
AACTGGGTCATGCTGTTTCT+GGG 0.320324 1_3:-74285649 Msa0140130:five_prime_UTR
GTTGTTGAAGCAGTGTAATT+CGG 0.326136 1_3:+74278957 None:intergenic
CCTTTACAAATGTTGGGTTC+TGG 0.330041 1_3:+74278820 None:intergenic
GAAAGAAGATATAAAGGAAA+AGG 0.338790 1_3:-74285318 Msa0140130:five_prime_UTR
GGTGGCAAACTAGGGTAATT+TGG 0.343296 1_3:+74284754 None:intergenic
GAGGAGTTGGGTCAAATGTT+TGG 0.355446 1_3:-74278651 Msa0140130:CDS
TACCCATGTCCAGCTTGGTC+GGG 0.356588 1_3:-74285905 None:intergenic
CAATCATGGACTCCAAAGTA+TGG 0.357970 1_3:-74279140 Msa0140130:CDS
AATCATACCTTTACAAATGT+TGG 0.360748 1_3:+74278813 None:intergenic
AACATCAGGGTTGGGTCAGC+AGG 0.365210 1_3:-74285268 Msa0140130:CDS
TTGTGGCTGCATCATATTAG+AGG 0.366770 1_3:+74279496 None:intergenic
ACCTGCATATTTCCATACTT+TGG 0.373068 1_3:+74279128 None:intergenic
ATTAGGGGAGTCTGGATTCC+AGG 0.373216 1_3:-74278913 Msa0140130:CDS
TTGTTGAAGCAGTGTAATTC+GGG 0.374824 1_3:+74278958 None:intergenic
TGGAACCTGAAGGTTACATT+TGG 0.379289 1_3:+74278224 None:intergenic
GTTTCCTGATTGAAGGTAAT+GGG 0.381131 1_3:+74279571 None:intergenic
GCTTGTACTTGTGTACTCTA+AGG 0.382313 1_3:-74277982 Msa0140130:three_prime_UTR
TTGATGATGGTAGGAGGAGG+AGG 0.385574 1_3:-74285071 Msa0140130:intron
TTCGGTGGCCGAATTCTCAT+TGG 0.386961 1_3:-74281632 Msa0140130:CDS
ATCATACCTTTACAAATGTT+GGG 0.387358 1_3:+74278814 None:intergenic
GAAGGATACATTTCTTCCTA+TGG 0.388663 1_3:-74284420 Msa0140130:CDS
GGCGTTCACTTGACATCTCT+CGG 0.389532 1_3:-74278698 Msa0140130:CDS
CTCAATTCCCTAAGCTTTCA+AGG 0.390996 1_3:-74279755 Msa0140130:CDS
TCCATGTGTGCTGGTGTCAC+TGG 0.393127 1_3:+74284343 None:intergenic
CATGTTGCTGTTGTTGAGCT+TGG 0.394512 1_3:+74279405 None:intergenic
GGCAGCTTGTGTTCGTCGAC+CGG 0.394739 1_3:-74278590 Msa0140130:CDS
AGGTACATGGGCACAATAAC+AGG 0.395133 1_3:-74281675 Msa0140130:CDS
ACATTTCTTCCTATGGAATT+GGG 0.395296 1_3:-74284413 Msa0140130:CDS
GTATTTGCCCATCGATTTCT+CGG 0.396181 1_3:+74284776 None:intergenic
AAGAGATTGCCAGTTCCTTC+AGG 0.401444 1_3:+74279221 None:intergenic
TCGTGCAGGTTAAGTCCAAC+TGG 0.403486 1_3:-74285666 Msa0140130:five_prime_UTR
GATTCCCAAATGTAACCTTC+AGG 0.405342 1_3:-74278229 Msa0140130:three_prime_UTR
GGGTCAAATGTTTGGAATTG+AGG 0.410114 1_3:-74278643 Msa0140130:CDS
TGTTGAAAATTCACCATTTG+TGG 0.412897 1_3:+74279602 None:intergenic
AAAGAAGATATAAAGGAAAA+GGG 0.418467 1_3:-74285317 Msa0140130:five_prime_UTR
GATATGAAGCTTTCAACATC+AGG 0.419913 1_3:-74285282 Msa0140130:CDS
TCGCTTTGCCCTGAAGGAAC+TGG 0.421075 1_3:-74279230 Msa0140130:CDS
CCATCTTTATTATTTATGTC+AGG 0.422403 1_3:-74278128 Msa0140130:three_prime_UTR
TGGATTGTTGTTGTCTCTGA+TGG 0.422799 1_3:+74279345 None:intergenic
TATTACTTGGTTTCTGAAGA+AGG 0.423272 1_3:+74279438 None:intergenic
TAGTTCGAGGGCTGCTTGCT+TGG 0.423956 1_3:+74284386 None:intergenic
ACCAACTGAGGTGGCAAACT+AGG 0.424599 1_3:+74284745 None:intergenic
TCGTGTGGTTTACTTCCCTC+AGG 0.426327 1_3:-74284973 Msa0140130:CDS
TGATGATGGTAGGAGGAGGA+GGG 0.428230 1_3:-74285070 Msa0140130:intron
GAGCTATGGCATGCATGTGC+GGG 0.429113 1_3:-74285026 Msa0140130:CDS
CGGTCTCAATCGATAGTGAT+AGG 0.431967 1_3:-74285763 Msa0140130:five_prime_UTR
TGTTTCCTGATTGAAGGTAA+TGG 0.432025 1_3:+74279570 None:intergenic
TTCTCCTTGGCGACGATCCG+TGG 0.432036 1_3:-74278554 Msa0140130:CDS
TCAACACAATTAGGGGAGTC+TGG 0.433146 1_3:-74278921 Msa0140130:CDS
TCCCTAAGCTTTCAAGGTGC+TGG 0.434039 1_3:-74279749 Msa0140130:CDS
AAGTTTATGGCTTTAAGTTA+GGG 0.435522 1_3:-74285390 Msa0140130:five_prime_UTR
ACAGAGCGCCAATGAGAATT+CGG 0.441458 1_3:+74281624 None:intergenic
ACCGGAAGATATTCAGAAGA+TGG 0.441945 1_3:-74278377 Msa0140130:CDS
CAAGCCATGTTGGCAGCAGC+TGG 0.445522 1_3:-74279659 Msa0140130:CDS
AATTATTGTTTCCTGATTGA+AGG 0.445577 1_3:+74279564 None:intergenic
GTTTCCTGCTTCAGTTCCCT+CGG 0.445848 1_3:-74279270 Msa0140130:CDS
TCGTGAGCTGCGAGAGGAGT+TGG 0.445981 1_3:-74278664 Msa0140130:CDS
CCCTCGGGACAAAACATGCT+TGG 0.447307 1_3:-74279254 Msa0140130:CDS
TGTCCCGAGGGAACTGAAGC+AGG 0.448589 1_3:+74279266 None:intergenic
GGAACCTGAAGGTTACATTT+GGG 0.449492 1_3:+74278225 None:intergenic
TGGAGTTCTTGATTATTACT+TGG 0.451846 1_3:+74279425 None:intergenic
ATCGAGTCTCTGCTGCATCC+AGG 0.452229 1_3:+74279718 None:intergenic
ACAGCCACGGGTGTCATTAT+GGG 0.453297 1_3:-74280778 Msa0140130:CDS
CCTGGCACCTCATCTTTGCT+TGG 0.453584 1_3:-74280684 Msa0140130:intron
TTTACAAATCGGGATCGGTT+GGG 0.453914 1_3:-74278719 Msa0140130:CDS
CTTGGGTCGCTTTGCCCTGA+AGG 0.454313 1_3:-74279236 Msa0140130:CDS
CCCTAGTTTGCCACCTCAGT+TGG 0.454591 1_3:-74284746 Msa0140130:CDS
CGTGAGCTGCGAGAGGAGTT+GGG 0.455026 1_3:-74278663 Msa0140130:CDS
CATTCCAGCTGCTGCCAACA+TGG 0.457092 1_3:+74279655 None:intergenic
GATCATTCGTGAATAACGTT+TGG 0.457590 1_3:-74278417 Msa0140130:CDS
CCCATCTTCTGAATATCTTC+CGG 0.458005 1_3:+74278376 None:intergenic
GTTTACAAATCGGGATCGGT+TGG 0.458017 1_3:-74278720 Msa0140130:CDS
AAAGAGAGAATTAAAGGAAG+AGG 0.462263 1_3:+74285850 None:intergenic
TGCAGTTGGTAGGGACACTA+AGG 0.462596 1_3:+74285001 None:intergenic
CATTACAGTTTGCGGTCGAC+TGG 0.464099 1_3:+74282302 None:intergenic
GGTCAAATGTTTGGAATTGA+GGG 0.464166 1_3:-74278642 Msa0140130:CDS
AATAACAGGCATAAGTGATC+TGG 0.466043 1_3:-74281661 Msa0140130:CDS
TATTCAGAAGATGGGAGATC+AGG 0.466213 1_3:-74278368 Msa0140130:CDS
TTGGTGAATGTGAATTGAAA+TGG 0.466410 1_3:-74285428 Msa0140130:five_prime_UTR
GAGAATGATGTGCTTCTCCT+TGG 0.467913 1_3:-74278567 Msa0140130:CDS
AATATGCAGGTCAATGCCTT+TGG 0.468146 1_3:-74279116 Msa0140130:CDS
TGATCATTCCCGAGTAAAGT+TGG 0.471692 1_3:+74279695 None:intergenic
AACAGTTACCACAACAATCA+TGG 0.472142 1_3:-74279154 Msa0140130:CDS
TCTGAAGAAGGTGCTGAGAC+AGG 0.472514 1_3:+74279450 None:intergenic
AAGGTGCTGGTATGTTGCCC+TGG 0.473085 1_3:-74279736 Msa0140130:CDS
AAGCTTTCAACATCAGGGTT+GGG 0.474639 1_3:-74285276 Msa0140130:CDS
GATGATGGCATTACAGTTTG+CGG 0.474988 1_3:+74282294 None:intergenic
CTGGTGCATCAACACAATTA+GGG 0.475544 1_3:-74278929 Msa0140130:CDS
TACCAGCACCTTGAAAGCTT+AGG 0.478249 1_3:+74279747 None:intergenic
AAACGACACCTTCTTACAAC+AGG 0.480570 1_3:-74282518 Msa0140130:CDS
CCCTCAGGGTCATAGTGAGC+AGG 0.480735 1_3:-74284958 Msa0140130:intron
CCTCGGGACAAAACATGCTT+GGG 0.481398 1_3:-74279253 Msa0140130:CDS
TGCCCAAAATCATGTTCTCT+CGG 0.482478 1_3:-74279024 Msa0140130:CDS
TCCAATGTGCATACTATCAC+TGG 0.484034 1_3:+74282263 None:intergenic
TTAGAAGACCCTCTTAGATC+AGG 0.488946 1_3:-74278615 Msa0140130:CDS
AACCACCATACCGGAGTCAA+TGG 0.492073 1_3:+74284535 None:intergenic
GAAGCTTTCAACATCAGGGT+TGG 0.494409 1_3:-74285277 Msa0140130:CDS
CCAAGCAAAGATGAGGTGCC+AGG 0.496339 1_3:+74280684 None:intergenic
CCTACCCATTACCTTCAATC+AGG 0.501586 1_3:-74279575 Msa0140130:CDS
GGTGTCAATATCGATTCATC+TGG 0.502455 1_3:-74279002 Msa0140130:CDS
AGAGATTGCCAGTTCCTTCA+GGG 0.503136 1_3:+74279222 None:intergenic
CTGTAAAACACTTCCTCACT+CGG 0.503328 1_3:-74285783 Msa0140130:five_prime_UTR
GTACCCATGTCCAGCTTGGT+CGG 0.506990 1_3:-74285906 None:intergenic
ACCAGCACCTTGAAAGCTTA+GGG 0.507030 1_3:+74279748 None:intergenic
AGACTCGATCCAACTTTACT+CGG 0.507840 1_3:-74279704 Msa0140130:CDS
CTTGGAATGCCCAATTCCAT+AGG 0.508703 1_3:+74284404 None:intergenic
CAGCTGCTGCCAACATGGCT+TGG 0.509435 1_3:+74279660 None:intergenic
GGAAACAATGACGGATACAT+TGG 0.511721 1_3:+74280732 None:intergenic
ACCCATGTCCAGCTTGGTCG+GGG 0.512771 1_3:-74285904 None:intergenic
CAGCACAAGAACTAATTGCT+AGG 0.513016 1_3:-74284176 Msa0140130:CDS
TACTGTACCCATGTCCAGCT+TGG 0.513263 1_3:-74285910 None:intergenic
TTGAAACGTCCATGGCATCC+TGG 0.514642 1_3:-74280702 Msa0140130:CDS
TCTCCTTGGCGACGATCCGT+GGG 0.515507 1_3:-74278553 Msa0140130:CDS
GGGATCTCCATGATGTTGAA+TGG 0.516288 1_3:-74284155 Msa0140130:CDS
GCCCAAAATCATGTTCTCTC+GGG 0.516372 1_3:-74279023 Msa0140130:CDS
CTAGCAATTAGTTCTTGTGC+TGG 0.516892 1_3:+74284177 None:intergenic
AAGAGAGAATTAAAGGAAGA+GGG 0.520463 1_3:+74285851 None:intergenic
GTAAGTACTTGGGTTTGTTG+TGG 0.520724 1_3:+74279479 None:intergenic
TTACTGTCTTCTACAATCCA+AGG 0.520940 1_3:-74282197 Msa0140130:intron
AGCTGCCAGCCTGATCTAAG+AGG 0.521748 1_3:+74278606 None:intergenic
GATGATGGTAGGAGGAGGAG+GGG 0.521810 1_3:-74285069 Msa0140130:intron
GAACAACGTGTCACTCGTGC+AGG 0.522088 1_3:-74285680 Msa0140130:five_prime_UTR
GTTGTAAGAAGGTGTCGTTT+TGG 0.523090 1_3:+74282521 None:intergenic
GTGTAATTCGGGACAGTGGT+GGG 0.525510 1_3:+74278969 None:intergenic
TCGAGTCTCTGCTGCATCCA+GGG 0.526729 1_3:+74279719 None:intergenic
CCATGGACGTTTCAATCTGA+GGG 0.526959 1_3:+74280710 None:intergenic
GCGGTAGAAATGCATGGACT+AGG 0.528086 1_3:-74278346 Msa0140130:CDS
AGCAGCTGGAATGCAGAACA+TGG 0.531369 1_3:-74279645 Msa0140130:CDS
GCATTGTGACATTATGAAGT+TGG 0.532620 1_3:+74284719 None:intergenic
AATGTCTGAATTCTGAGCTA+TGG 0.533163 1_3:-74285040 Msa0140130:CDS
TCCAAAGTATGGAAATATGC+AGG 0.535455 1_3:-74279129 Msa0140130:CDS
GTATATCAAAATACTTTCAC+CGG 0.536924 1_3:-74278395 Msa0140130:CDS
CCAACTGAGGTGGCAAACTA+GGG 0.537055 1_3:+74284746 None:intergenic
TTCTCATTGGCGCTCTGTCA+AGG 0.537284 1_3:-74281619 Msa0140130:intron
GCAGCTTGTGTTCGTCGACC+GGG 0.539113 1_3:-74278589 Msa0140130:CDS
GCAATTAGTTCTTGTGCTGG+TGG 0.539778 1_3:+74284180 None:intergenic
GACACCTTCTTACAACAGGC+TGG 0.539846 1_3:-74282514 Msa0140130:CDS
TGCTCCAGCCTGTTGTAAGA+AGG 0.539965 1_3:+74282510 None:intergenic
TGAGCTATGGCATGCATGTG+CGG 0.540701 1_3:-74285027 Msa0140130:CDS
CCCTCAGATTGAAACGTCCA+TGG 0.541348 1_3:-74280710 Msa0140130:CDS
GCCATGGACGTTTCAATCTG+AGG 0.543357 1_3:+74280709 None:intergenic
TCTGGACAACCACCATCGAT+TGG 0.543380 1_3:-74278277 Msa0140130:CDS
CCAGAACCCAACATTTGTAA+AGG 0.543632 1_3:-74278820 Msa0140130:intron
TACCAACAGAAATACGTGTA+TGG 0.544658 1_3:+74282037 None:intergenic
TAAGTGATCTGGATGCTGTT+CGG 0.545538 1_3:-74281650 Msa0140130:CDS
CCTGACATAAATAATAAAGA+TGG 0.547877 1_3:+74278128 None:intergenic
CCGGAAGATATTCAGAAGAT+GGG 0.549827 1_3:-74278376 Msa0140130:CDS
GGACAAAGGCTTAATGGCAC+TGG 0.551217 1_3:-74278319 Msa0140130:CDS
TACCATACACGTATTTCTGT+TGG 0.551422 1_3:-74282039 Msa0140130:CDS
ATATCTCATGAGGCCACAAA+TGG 0.555481 1_3:-74279615 Msa0140130:CDS
GATGAGGTGCCAGGATGCCA+TGG 0.555703 1_3:+74280693 None:intergenic
TTTCCTGCTTCAGTTCCCTC+GGG 0.556002 1_3:-74279269 Msa0140130:CDS
TTGGGTCAGCAGGGACATGA+AGG 0.556129 1_3:-74285258 Msa0140130:intron
AGCTTAGGGAATTGAGACCT+TGG 0.556296 1_3:+74279762 None:intergenic
GAAACAATGACGGATACATT+GGG 0.557772 1_3:+74280733 None:intergenic
TCTGCTGTGAATAGGTTGGA+TGG 0.559713 1_3:-74280824 Msa0140130:intron
ACGAGTTCCTGCAGTTGGTA+GGG 0.560237 1_3:+74284992 None:intergenic
GAGTGGTAGAGTTAGTGCAT+TGG 0.561799 1_3:-74285469 Msa0140130:five_prime_UTR
ATAGTTGAATTGATTGTGGC+TGG 0.561841 1_3:+74279525 None:intergenic
GGAGAAGCACATCATTCTCC+CGG 0.562050 1_3:+74278571 None:intergenic
GAAATGCATGGACTAGGCTC+AGG 0.562764 1_3:-74278340 Msa0140130:CDS
GCCAGTGACACCAGCACACA+TGG 0.563705 1_3:-74284344 Msa0140130:CDS
GGAATGCAGAACATGGGTAG+TGG 0.565667 1_3:-74279638 Msa0140130:CDS
GAAACTTCCATTCAACATCA+TGG 0.566654 1_3:+74284148 None:intergenic
CTATCGAGTCTAACGAGAAG+TGG 0.569823 1_3:-74279194 Msa0140130:CDS
ATAGGTTTACAAATCGGGAT+CGG 0.571157 1_3:-74278724 Msa0140130:intron
GTAGAAGTTGGAACATTCAA+AGG 0.571674 1_3:+74277908 None:intergenic
CTGCTGTGAATAGGTTGGAT+GGG 0.572286 1_3:-74280823 Msa0140130:intron
ACTGTTCATTCATCAATGAC+TGG 0.577646 1_3:+74279171 None:intergenic
GCCACAATCAATTCAACTAT+CGG 0.578034 1_3:-74279522 Msa0140130:CDS
GGATGGGATGAATCAACAGC+AGG 0.579902 1_3:-74280807 Msa0140130:CDS
TGAAGATGAATCTTGCATGC+AGG 0.583324 1_3:+74278878 None:intergenic
AGCAGGAGAGAGACAGCCAC+GGG 0.584100 1_3:-74280790 Msa0140130:CDS
AAGACCCTCTTAGATCAGGC+TGG 0.586173 1_3:-74278611 Msa0140130:CDS
AGAGAATCCTCCATGTGTGC+TGG 0.589174 1_3:+74284334 None:intergenic
TTAGTGTCCCTACCAACTGC+AGG 0.589428 1_3:-74284999 Msa0140130:CDS
GACACTACAGCCATTGACTC+CGG 0.591291 1_3:-74284545 Msa0140130:intron
CCTGATTGAAGGTAATGGGT+AGG 0.593050 1_3:+74279575 None:intergenic
ACAACTAACCGAGAAATCGA+TGG 0.593493 1_3:-74284784 Msa0140130:CDS
AATGTAACCTTCAGGTTCCA+CGG 0.595104 1_3:-74278221 Msa0140130:three_prime_UTR
AAGCAACAACTGCTCTAATG+TGG 0.597526 1_3:-74279805 Msa0140130:CDS
ACTTTCTCAGCTGCGCGACG+AGG 0.597999 1_3:+74284308 None:intergenic
AGCACAAGAACTAATTGCTA+GGG 0.598008 1_3:-74284175 Msa0140130:CDS
AGTGCTAAGAGACTTGTAGC+TGG 0.598514 1_3:-74282479 Msa0140130:CDS
TCACTGGACAGAACAGATGA+TGG 0.599608 1_3:+74282279 None:intergenic
ATGGACTAGGCTCAGGACAA+AGG 0.599712 1_3:-74278333 Msa0140130:CDS
CACGAGTTCCTGCAGTTGGT+AGG 0.600545 1_3:+74284991 None:intergenic
TCAACAATACCAAGCCATGT+TGG 0.601545 1_3:-74279669 Msa0140130:CDS
TTAGGGGAGTCTGGATTCCA+GGG 0.601940 1_3:-74278912 Msa0140130:CDS
GATCAGGCGGTAGAAATGCA+TGG 0.603040 1_3:-74278352 Msa0140130:CDS
ACCACACGAGTTCCTGCAGT+TGG 0.604462 1_3:+74284987 None:intergenic
AGTGGTATGACAAACTCAGA+TGG 0.604732 1_3:+74282084 None:intergenic
CGTGTGGTTTACTTCCCTCA+GGG 0.606712 1_3:-74284972 Msa0140130:CDS
GACTCGATCCAACTTTACTC+GGG 0.608927 1_3:-74279703 Msa0140130:CDS
ATATGAAGCTTTCAACATCA+GGG 0.611135 1_3:-74285281 Msa0140130:CDS
ACATCAGGGTTGGGTCAGCA+GGG 0.612751 1_3:-74285267 Msa0140130:CDS
ATGTGACATTGCGCTGCCAA+AGG 0.613369 1_3:+74279100 None:intergenic
CAGAAACAGCATGACCCAGT+TGG 0.614530 1_3:+74285651 None:intergenic
ACTGCTTCAACAACTGACAC+TGG 0.614943 1_3:-74278948 Msa0140130:CDS
AGCTATGGCATGCATGTGCG+GGG 0.615544 1_3:-74285025 Msa0140130:CDS
AATCTGAGGGGAAACAATGA+CGG 0.616725 1_3:+74280723 None:intergenic
CTGAAGAGTCAAGTGTCCGC+AGG 0.618203 1_3:-74281990 Msa0140130:intron
TGTAATTCGGGACAGTGGTG+GGG 0.618990 1_3:+74278970 None:intergenic
ACCGATAGTTGAATTGATTG+TGG 0.620991 1_3:+74279521 None:intergenic
CGTGCAGGTTAAGTCCAACT+GGG 0.621805 1_3:-74285665 Msa0140130:five_prime_UTR
AGTGTAATTCGGGACAGTGG+TGG 0.621924 1_3:+74278968 None:intergenic
CAACTAACCGAGAAATCGAT+GGG 0.622225 1_3:-74284783 Msa0140130:CDS
ACTCCCACGGATCGTCGCCA+AGG 0.622867 1_3:+74278550 None:intergenic
TTTGGAGTCCATGATTGTTG+TGG 0.623560 1_3:+74279146 None:intergenic
GTATGAACATTACCAGCGGA+GGG 0.624407 1_3:+74284282 None:intergenic
TGCAGGCATATAGAGAACCC+TGG 0.624512 1_3:+74278895 None:intergenic
ATAGTGATAGGCCACAAAAG+AGG 0.625150 1_3:-74285751 Msa0140130:five_prime_UTR
ATATGACGGTGACGGCACAT+TGG 0.626796 1_3:+74279325 None:intergenic
CTGCTATCGTGAGCTGCGAG+AGG 0.627205 1_3:-74278670 Msa0140130:CDS
CAATCACCATATGAAAAGCA+CGG 0.627382 1_3:+74282451 None:intergenic
CAGCAGGAGAGAGACAGCCA+CGG 0.630554 1_3:-74280791 Msa0140130:CDS
TAATCAAGTGAGCCAATCGA+TGG 0.632439 1_3:+74278265 None:intergenic
GCTGCCAGCCTGATCTAAGA+GGG 0.635102 1_3:+74278607 None:intergenic
ATGGATGTAGGAAGAGCAGA+AGG 0.635306 1_3:-74284438 Msa0140130:intron
TCCAGTGATAGTATGCACAT+TGG 0.639677 1_3:-74282264 Msa0140130:CDS
GAAACCGATACTTACTCCCA+CGG 0.639696 1_3:+74278537 None:intergenic
TGTACTTGTGTACTCTAAGG+AGG 0.643551 1_3:-74277979 Msa0140130:three_prime_UTR
AAATGTACCAAGCAAAGATG+AGG 0.645243 1_3:+74280677 None:intergenic
TCAAGTGAGCCAATCGATGG+TGG 0.647291 1_3:+74278268 None:intergenic
GTCAAATGTTTGGAATTGAG+GGG 0.651017 1_3:-74278641 Msa0140130:CDS
GCTCTAATGTGGATGAGAGG+TGG 0.652265 1_3:-74279794 Msa0140130:CDS
TTTGTGTCAATCTGAACTTG+AGG 0.652883 1_3:-74278055 Msa0140130:three_prime_UTR
TCAGAAGATGGGAGATCAGG+CGG 0.653224 1_3:-74278365 Msa0140130:CDS
AGTATGAACATTACCAGCGG+AGG 0.659622 1_3:+74284281 None:intergenic
GTCTTGACCGTGGAACCTGA+AGG 0.660515 1_3:+74278214 None:intergenic
CAAAGAAATTGTCTTGACCG+TGG 0.660754 1_3:+74278204 None:intergenic
TGAAGTTGGCAAACCAACTG+AGG 0.662508 1_3:+74284733 None:intergenic
ACCTGCTCACTATGACCCTG+AGG 0.662847 1_3:+74284957 None:intergenic
AGTTGGCAAACCAACTGAGG+TGG 0.663588 1_3:+74284736 None:intergenic
TGGGTAGTGGATATCTCATG+AGG 0.664146 1_3:-74279625 Msa0140130:CDS
TGTGGCTGGTGAAGTTGCAA+AGG 0.664859 1_3:+74279539 None:intergenic
ACCAACTGCAGGAACTCGTG+TGG 0.664970 1_3:-74284988 Msa0140130:CDS
CTATCGATTGAGACCGAGTG+AGG 0.666510 1_3:+74285770 None:intergenic
AGAGGTGGAACTGCAGACCA+AGG 0.666574 1_3:-74279779 Msa0140130:CDS
AGTTGCTGAAGCATGAGCAG+CGG 0.669024 1_3:+74282230 None:intergenic
TGGTGCATCAACACAATTAG+GGG 0.669040 1_3:-74278928 Msa0140130:CDS
ATTTCCCATAATGACACCCG+TGG 0.669764 1_3:+74280774 None:intergenic
GCAGTTGGTAGGGACACTAA+GGG 0.670395 1_3:+74285002 None:intergenic
AGAAATACGTGTATGGTACA+CGG 0.672449 1_3:+74282044 None:intergenic
AGCAGTGTAATTCGGGACAG+TGG 0.673487 1_3:+74278965 None:intergenic
CCTGCTCACTATGACCCTGA+GGG 0.674698 1_3:+74284958 None:intergenic
GCAGCTGGAATGCAGAACAT+GGG 0.677904 1_3:-74279644 Msa0140130:CDS
GAAGTTGGAACATTCAAAGG+AGG 0.681937 1_3:+74277911 None:intergenic
GCATCTGAATCACAATGTGG+AGG 0.684419 1_3:+74279044 None:intergenic
GTGATCTGGATGCTGTTCGG+TGG 0.685536 1_3:-74281647 Msa0140130:CDS
ACTGCTCTAATGTGGATGAG+AGG 0.692595 1_3:-74279797 Msa0140130:CDS
TAAATAATAAAGATGGCACG+TGG 0.713144 1_3:+74278135 None:intergenic
CATGGACGTTTCAATCTGAG+GGG 0.715415 1_3:+74280711 None:intergenic
TGGGCATCTGAATCACAATG+TGG 0.724623 1_3:+74279041 None:intergenic
AGTGACACCAGCACACATGG+AGG 0.749790 1_3:-74284341 Msa0140130:CDS
GTGGTTGTCCAGAAACAATG+TGG 0.765957 1_3:+74278287 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTCATTATTGTTT+TGG - chr1_3:74278239-74278258 Msa0140130:three_prime_UTR 10.0%
!!! TTTTTTTTCATTATTGTTTT+GGG - chr1_3:74278240-74278259 Msa0140130:three_prime_UTR 10.0%
!! GAAAAAAAAATATATGTATA+GGG + chr1_3:74279962-74279981 None:intergenic 10.0%
!! TGAAAAAAAAATATATGTAT+AGG + chr1_3:74279963-74279982 None:intergenic 10.0%
!!! GTTAAACAATTTAATATTTT+CGG + chr1_3:74280159-74280178 None:intergenic 10.0%
!! TAGAATTTGAAAAAATAATT+AGG + chr1_3:74282572-74282591 None:intergenic 10.0%
!!! ACTTTTTAATAAATTCTTAC+AGG - chr1_3:74279984-74280003 Msa0140130:intron 15.0%
!!! ACTCAATATTTTTAAACAAT+AGG - chr1_3:74280071-74280090 Msa0140130:intron 15.0%
!!! CTTTTTGAAAACTTTTAAAT+AGG + chr1_3:74280100-74280119 None:intergenic 15.0%
!!! ATATTTTTTTTTTGTGAAGA+AGG - chr1_3:74280570-74280589 Msa0140130:intron 15.0%
!!! TATTTTTTTTTTGTGAAGAA+GGG - chr1_3:74280571-74280590 Msa0140130:intron 15.0%
!! ATTAAAATAGAGAAAAACAT+GGG + chr1_3:74282346-74282365 None:intergenic 15.0%
!!! TAAGCAAAAATTTACATTTT+AGG + chr1_3:74283783-74283802 None:intergenic 15.0%
!! TTATGTATGATAAGAAATTT+AGG - chr1_3:74285694-74285713 Msa0140130:five_prime_UTR 15.0%
!!! TCTTTTCTTTGCATATATAA+GGG + chr1_3:74277903-74277922 None:intergenic 20.0%
!!! TTCTTTTCTTTGCATATATA+AGG + chr1_3:74277904-74277923 None:intergenic 20.0%
!! AAACTGAAAAACAAAGTAAA+GGG + chr1_3:74278054-74278073 None:intergenic 20.0%
!! AAAACTGAAAAACAAAGTAA+AGG + chr1_3:74278055-74278074 None:intergenic 20.0%
!!! TTTTTAGTGTTTTACCTTAA+AGG - chr1_3:74278212-74278231 Msa0140130:three_prime_UTR 20.0%
!!! TTTTAGTGTTTTACCTTAAA+GGG - chr1_3:74278213-74278232 Msa0140130:three_prime_UTR 20.0%
!! TGAAGTTAATTGAAAGTTTA+TGG - chr1_3:74278376-74278395 Msa0140130:CDS 20.0%
!! ACTCAATAGTACTATAAATT+TGG + chr1_3:74278427-74278446 None:intergenic 20.0%
!! AAAGAAGATATAAAGGAAAA+GGG - chr1_3:74278462-74278481 Msa0140130:intron 20.0%
!!! CATTTCTTAGTATTTTGTTT+TGG - chr1_3:74278578-74278597 Msa0140130:CDS 20.0%
!! AAACAATTCAATAGATTCTA+TGG - chr1_3:74278926-74278945 Msa0140130:CDS 20.0%
!!! ATGCATTTCTCTTAAATTTT+GGG - chr1_3:74279553-74279572 Msa0140130:CDS 20.0%
!! AACTTAATCTTTCTTTAGTA+TGG + chr1_3:74279823-74279842 None:intergenic 20.0%
!! TACTAAAGAAAGATTAAGTT+AGG - chr1_3:74279823-74279842 Msa0140130:intron 20.0%
!!! TCTACTATCATTTTAACAAT+GGG + chr1_3:74280327-74280346 None:intergenic 20.0%
!!! TTGTTTTTGCTAGTTTATAT+CGG + chr1_3:74280803-74280822 None:intergenic 20.0%
!! TAAACTAGCAAAAACAAAAT+TGG - chr1_3:74280806-74280825 Msa0140130:CDS 20.0%
!!! GTTTATTTGTTGTTATGTAT+TGG + chr1_3:74281174-74281193 None:intergenic 20.0%
!! AAAGAAAAATAAGTAGCTTT+AGG + chr1_3:74281842-74281861 None:intergenic 20.0%
!! TTATATTAAATCGCATATCA+CGG + chr1_3:74281916-74281935 None:intergenic 20.0%
!! TAAGTAAATGAGAAATAGTT+TGG + chr1_3:74282061-74282080 None:intergenic 20.0%
!! GAAGTTTACATAATAACAAT+AGG + chr1_3:74282241-74282260 None:intergenic 20.0%
!! CATTAAAATAGAGAAAAACA+TGG + chr1_3:74282347-74282366 None:intergenic 20.0%
!!! CATGTTTTTCTCTATTTTAA+TGG - chr1_3:74282345-74282364 Msa0140130:intron 20.0%
!!! ATTAAACAGAATACGTTTTA+AGG + chr1_3:74282491-74282510 None:intergenic 20.0%
!! AAAAAATAATTAGGACATGA+AGG + chr1_3:74282563-74282582 None:intergenic 20.0%
!! AATCAGATATTTATAAACTC+TGG - chr1_3:74282642-74282661 Msa0140130:intron 20.0%
!! ATTCACAAATAATATAGAAC+AGG + chr1_3:74282685-74282704 None:intergenic 20.0%
!!! GTTTTACAACTTTCTTATAT+TGG - chr1_3:74282785-74282804 Msa0140130:intron 20.0%
!! TCCACTTATTAATGTTATTA+TGG - chr1_3:74282809-74282828 Msa0140130:intron 20.0%
!! ATAGTCAAAAAGAAAAACTA+CGG + chr1_3:74283171-74283190 None:intergenic 20.0%
!!! ATTTTTTAGTTAAATGGAGA+TGG - chr1_3:74283262-74283281 Msa0140130:intron 20.0%
!!! TATTGTTGATCCATTTTTTT+TGG - chr1_3:74283412-74283431 Msa0140130:intron 20.0%
!!! ATTGTTGATCCATTTTTTTT+GGG - chr1_3:74283413-74283432 Msa0140130:intron 20.0%
!!! GTTTAATTTTGTCTTTTCAT+AGG - chr1_3:74285037-74285056 Msa0140130:CDS 20.0%
!!! GTTGACATTTTCTTTATTTT+TGG - chr1_3:74285325-74285344 Msa0140130:five_prime_UTR 20.0%
!!! TTATAGTTGTGATTTTAATG+AGG + chr1_3:74285896-74285915 None:intergenic 20.0%
!! TTTTCTTTGCATATATAAGG+GGG + chr1_3:74277901-74277920 None:intergenic 25.0%
!! CTTTTCTTTGCATATATAAG+GGG + chr1_3:74277902-74277921 None:intergenic 25.0%
!!! AGTTTTTTTTTCTGTCTTCA+TGG - chr1_3:74278069-74278088 Msa0140130:three_prime_UTR 25.0%
! GAAAAAAAAACAACCCTTTA+AGG + chr1_3:74278229-74278248 None:intergenic 25.0%
!!! ATTATTGTTTTGGGATGTTT+TGG - chr1_3:74278249-74278268 Msa0140130:exon 25.0%
!!! GTTTTGATAGATGAAATGAT+TGG - chr1_3:74278332-74278351 Msa0140130:CDS 25.0%
!!! AAAGTTTATGGCTTTAAGTT+AGG - chr1_3:74278388-74278407 Msa0140130:CDS 25.0%
!!! AAGTTTATGGCTTTAAGTTA+GGG - chr1_3:74278389-74278408 Msa0140130:CDS 25.0%
! GAAAGAGAAAGAAGATATAA+AGG - chr1_3:74278455-74278474 Msa0140130:intron 25.0%
! GAAAGAAGATATAAAGGAAA+AGG - chr1_3:74278461-74278480 Msa0140130:intron 25.0%
! GCAAAAAGAAAGAATTGAAA+TGG + chr1_3:74278550-74278569 None:intergenic 25.0%
! AGGAAATGAAAAAACTTACA+AGG + chr1_3:74278678-74278697 None:intergenic 25.0%
! AAGCAAATTGAAACATTGTA+GGG + chr1_3:74278863-74278882 None:intergenic 25.0%
! AATTCAATAGATTCTATGGA+TGG - chr1_3:74278930-74278949 Msa0140130:CDS 25.0%
!! GTAATTTGTGTTTGTAACTA+TGG - chr1_3:74279322-74279341 Msa0140130:CDS 25.0%
!! GATGCATTTCTCTTAAATTT+TGG - chr1_3:74279552-74279571 Msa0140130:CDS 25.0%
! AAATAACAAGATCGTAAGAA+TGG + chr1_3:74279686-74279705 None:intergenic 25.0%
!!! ACGATCTTGTTATTTATATC+AGG - chr1_3:74279691-74279710 Msa0140130:CDS 25.0%
!!! CGATCTTGTTATTTATATCA+GGG - chr1_3:74279692-74279711 Msa0140130:CDS 25.0%
! AAAAATGACATTTCTGATCT+TGG - chr1_3:74280040-74280059 Msa0140130:intron 25.0%
! GCACATGATAATTAGAATAA+AGG - chr1_3:74280269-74280288 Msa0140130:intron 25.0%
!!! CTCTACTATCATTTTAACAA+TGG + chr1_3:74280328-74280347 None:intergenic 25.0%
! AAATTCATATAACTAGAGAG+CGG - chr1_3:74280423-74280442 Msa0140130:intron 25.0%
!! TTATACCTAATTGTTTTCCT+TGG + chr1_3:74280449-74280468 None:intergenic 25.0%
! TTGAGAGATTTAGATGTAAA+TGG - chr1_3:74280471-74280490 Msa0140130:intron 25.0%
! AGTAGTTAGCAATATATATG+TGG + chr1_3:74280697-74280716 None:intergenic 25.0%
!! GATTTTCCATATACTTACAT+TGG + chr1_3:74280752-74280771 None:intergenic 25.0%
!!! TGTTTTTGCTAGTTTATATC+GGG + chr1_3:74280802-74280821 None:intergenic 25.0%
! TGAGATTAACTTAAAACAAC+AGG + chr1_3:74281031-74281050 None:intergenic 25.0%
! TCTAATTTAGAGAAATGTAC+TGG - chr1_3:74281128-74281147 Msa0140130:intron 25.0%
!! ATTGTTTCCTTTTTCTCTTT+TGG - chr1_3:74281347-74281366 Msa0140130:intron 25.0%
! TCCTAAAAGCAAAAATACAT+GGG + chr1_3:74281421-74281440 None:intergenic 25.0%
! TTCCTAAAAGCAAAAATACA+TGG + chr1_3:74281422-74281441 None:intergenic 25.0%
!! TCTTTTGACAGTTTATATCA+TGG - chr1_3:74281661-74281680 Msa0140130:CDS 25.0%
!! CTTTTGACAGTTTATATCAT+GGG - chr1_3:74281662-74281681 Msa0140130:CDS 25.0%
!!! GCTTTGATATATTTTGAAAG+TGG + chr1_3:74281716-74281735 None:intergenic 25.0%
!!! TATAAAGTGTTGTCAAATAG+TGG - chr1_3:74281931-74281950 Msa0140130:intron 25.0%
! GAATTTGATTGGGAATTAAA+AGG + chr1_3:74282411-74282430 None:intergenic 25.0%
! GCCATAATAACATTAATAAG+TGG + chr1_3:74282813-74282832 None:intergenic 25.0%
! TATTACACAGATAAACTGTA+AGG + chr1_3:74283130-74283149 None:intergenic 25.0%
! TACAGTTTATCTGTGTAATA+TGG - chr1_3:74283130-74283149 Msa0140130:intron 25.0%
! GATGGAAAAAAGTGAAAATA+AGG - chr1_3:74283280-74283299 Msa0140130:intron 25.0%
! ATGAAAGCTACAAAATCTAA+AGG + chr1_3:74283357-74283376 None:intergenic 25.0%
!! AAGTCAAATTGTTTTCATGT+AGG + chr1_3:74283591-74283610 None:intergenic 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG + chr1_3:74283686-74283705 None:intergenic 25.0%
!!! AAATAACCACAGGTTTTTTT+GGG + chr1_3:74283895-74283914 None:intergenic 25.0%
!!! AAAATAACCACAGGTTTTTT+TGG + chr1_3:74283896-74283915 None:intergenic 25.0%
! AATTATTGTTTCCTGATTGA+AGG + chr1_3:74284218-74284237 None:intergenic 25.0%
!!! AAATCTGGTTTTGAATATGA+CGG + chr1_3:74284471-74284490 None:intergenic 25.0%
!! ATATTCAAAACCAGATTTTC+TGG - chr1_3:74284473-74284492 Msa0140130:intron 25.0%
! ATCATACCTTTACAAATGTT+GGG + chr1_3:74284968-74284987 None:intergenic 25.0%
! AATCATACCTTTACAAATGT+TGG + chr1_3:74284969-74284988 None:intergenic 25.0%
!! CTTTTCATAGGTTTACAAAT+CGG - chr1_3:74285049-74285068 Msa0140130:CDS 25.0%
!! TTTTCATAGGTTTACAAATC+GGG - chr1_3:74285050-74285069 Msa0140130:CDS 25.0%
! GTATATCAAAATACTTTCAC+CGG - chr1_3:74285384-74285403 Msa0140130:five_prime_UTR 25.0%
! CCTGACATAAATAATAAAGA+TGG + chr1_3:74285654-74285673 None:intergenic 25.0%
! CCATCTTTATTATTTATGTC+AGG - chr1_3:74285651-74285670 Msa0140130:five_prime_UTR 25.0%
AAGAGAGAATTAAAGGAAGA+GGG + chr1_3:74277931-74277950 None:intergenic 30.0%
AAAGAGAGAATTAAAGGAAG+AGG + chr1_3:74277932-74277951 None:intergenic 30.0%
AGAGAGAAAGAGAGAATTAA+AGG + chr1_3:74277938-74277957 None:intergenic 30.0%
!! TTTTGGTTGTGTTTGGATTT+TGG - chr1_3:74278266-74278285 Msa0140130:CDS 30.0%
! TTTGGTTGTGTTTGGATTTT+GGG - chr1_3:74278267-74278286 Msa0140130:CDS 30.0%
!! GGTTTGTTTGATTTTGAGTA+TGG - chr1_3:74278288-74278307 Msa0140130:CDS 30.0%
TTGGTGAATGTGAATTGAAA+TGG - chr1_3:74278351-74278370 Msa0140130:CDS 30.0%
ATATGAAGCTTTCAACATCA+GGG - chr1_3:74278498-74278517 Msa0140130:intron 30.0%
GGTTGTTTAAACAACACAAA+AGG + chr1_3:74278657-74278676 None:intergenic 30.0%
CCATCATCAAAAAGAGAAAA+AGG + chr1_3:74278698-74278717 None:intergenic 30.0%
! CCTTTTTCTCTTTTTGATGA+TGG - chr1_3:74278695-74278714 Msa0140130:CDS 30.0%
!!! TTTCTCTTTTTGATGATGGT+AGG - chr1_3:74278699-74278718 Msa0140130:CDS 30.0%
CAAGCAAATTGAAACATTGT+AGG + chr1_3:74278864-74278883 None:intergenic 30.0%
! ATGTTTCAATTTGCTTGCTA+TGG - chr1_3:74278867-74278886 Msa0140130:CDS 30.0%
CAAAACAAAGTTTGCAAGAA+AGG + chr1_3:74278905-74278924 None:intergenic 30.0%
!! CTTTCTTGCAAACTTTGTTT+TGG - chr1_3:74278903-74278922 Msa0140130:CDS 30.0%
!!! AACATGTTTTGATTGATTCC+AGG - chr1_3:74278964-74278983 Msa0140130:CDS 30.0%
CTTGTTTGATTAACTCTTGT+TGG - chr1_3:74279131-74279150 Msa0140130:CDS 30.0%
TACATTTCTTCCTATGGAAT+TGG - chr1_3:74279365-74279384 Msa0140130:CDS 30.0%
ACATTTCTTCCTATGGAATT+GGG - chr1_3:74279366-74279385 Msa0140130:CDS 30.0%
! AAGTTTCGACATATTTTTCG+AGG - chr1_3:74279647-74279666 Msa0140130:CDS 30.0%
CAGTAATCTAAGTATTTCAC+AGG + chr1_3:74279783-74279802 None:intergenic 30.0%
CTGTGAAATACTTAGATTAC+TGG - chr1_3:74279781-74279800 Msa0140130:CDS 30.0%
!! TTTTCGGTTGTTTTGCATTA+TGG + chr1_3:74280143-74280162 None:intergenic 30.0%
!!! TAGTAGAGTCTCTTTTTTGA+TGG - chr1_3:74280340-74280359 Msa0140130:intron 30.0%
!!! AGTCTCTTTTTTGATGGTTT+GGG - chr1_3:74280346-74280365 Msa0140130:intron 30.0%
TTCCTTTCTCATTATGAATC+CGG + chr1_3:74280545-74280564 None:intergenic 30.0%
GTATCACCAATGTAAGTATA+TGG - chr1_3:74280743-74280762 Msa0140130:CDS 30.0%
TGAAAGGAAGATTTGTGTTA+CGG - chr1_3:74280935-74280954 Msa0140130:intron 30.0%
!! TCCCATGTATTTTTGCTTTT+AGG - chr1_3:74281417-74281436 Msa0140130:intron 30.0%
GAAGGAAAAATACTATCATC+TGG - chr1_3:74282025-74282044 Msa0140130:CDS 30.0%
TACAAAATGAAAGTGAGACA+CGG + chr1_3:74282085-74282104 None:intergenic 30.0%
! ACTTTCATTTTGTAGGTACA+TGG - chr1_3:74282091-74282110 Msa0140130:CDS 30.0%
! CTTTCATTTTGTAGGTACAT+GGG - chr1_3:74282092-74282111 Msa0140130:CDS 30.0%
TAAGTAAAGATGTCAATGCA+AGG - chr1_3:74282183-74282202 Msa0140130:intron 30.0%
ATAACTAAATAGTGGCATAG+TGG + chr1_3:74282268-74282287 None:intergenic 30.0%
CAAGGCATATAACTAAATAG+TGG + chr1_3:74282276-74282295 None:intergenic 30.0%
AAAAACATGGGAAGATATCT+AGG + chr1_3:74282334-74282353 None:intergenic 30.0%
TTGATTGGGAATTAAAAGGA+AGG + chr1_3:74282407-74282426 None:intergenic 30.0%
!!! CAGAATACGTTTTAAGGATT+AGG + chr1_3:74282485-74282504 None:intergenic 30.0%
! TAACTTCCTGAATATTTTGC+TGG + chr1_3:74282608-74282627 None:intergenic 30.0%
TTCAGGAAGTTATGTTTGTA+AGG - chr1_3:74282616-74282635 Msa0140130:intron 30.0%
ATAATATAGAACAGGCAAAG+TGG + chr1_3:74282677-74282696 None:intergenic 30.0%
AACTGTACCATATCTCTAAA+TGG - chr1_3:74282730-74282749 Msa0140130:intron 30.0%
TCAGAAACCATTTAGAGATA+TGG + chr1_3:74282740-74282759 None:intergenic 30.0%
TTTAACTGTGACAATCACAA+AGG + chr1_3:74282891-74282910 None:intergenic 30.0%
! TCTTTTTATCTGCTGTGAAT+AGG - chr1_3:74282947-74282966 Msa0140130:intron 30.0%
TACATTGGGAATGTTGTTAA+AGG + chr1_3:74283035-74283054 None:intergenic 30.0%
TCAAAAAGAAAAACTACGGA+TGG + chr1_3:74283167-74283186 None:intergenic 30.0%
ATATATACAAACACACACAC+AGG + chr1_3:74283332-74283351 None:intergenic 30.0%
! AAAATCCTGTCTCTATGTTT+TGG + chr1_3:74283391-74283410 None:intergenic 30.0%
TTCAAACAGCCCAAAAAAAA+TGG + chr1_3:74283425-74283444 None:intergenic 30.0%
!!! TGACTTTTGAGTTTATCTAC+TGG - chr1_3:74283446-74283465 Msa0140130:intron 30.0%
ACTTATTCATAAGCACATGT+AGG - chr1_3:74283636-74283655 Msa0140130:intron 30.0%
! TTTTTGCTTATACTAGTGAC+CGG - chr1_3:74283793-74283812 Msa0140130:intron 30.0%
TTTATCCAAACAGTGTCTTA+GGG - chr1_3:74283841-74283860 Msa0140130:intron 30.0%
!! AAAAACCTGTGGTTATTTTG+AGG - chr1_3:74283897-74283916 Msa0140130:intron 30.0%
!!! AAAACCTGTGGTTATTTTGA+GGG - chr1_3:74283898-74283917 Msa0140130:intron 30.0%
TGTTGAAAATTCACCATTTG+TGG + chr1_3:74284180-74284199 None:intergenic 30.0%
! TATTACTTGGTTTCTGAAGA+AGG + chr1_3:74284344-74284363 None:intergenic 30.0%
TGGAGTTCTTGATTATTACT+TGG + chr1_3:74284357-74284376 None:intergenic 30.0%
ATGTTTGAATCCAGAAAATC+TGG + chr1_3:74284486-74284505 None:intergenic 30.0%
CGATCAAAACTTCTAATCTT+TGG - chr1_3:74285293-74285312 Msa0140130:exon 30.0%
ATTCACGAATGATCTACAAA+GGG + chr1_3:74285356-74285375 None:intergenic 30.0%
TATTCACGAATGATCTACAA+AGG + chr1_3:74285357-74285376 None:intergenic 30.0%
TAAATAATAAAGATGGCACG+TGG + chr1_3:74285647-74285666 None:intergenic 30.0%
!! GATTTTAATGAGGTAGAAGT+TGG + chr1_3:74285886-74285905 None:intergenic 30.0%
!! GTTTGATTTTGAGTATGGAG+TGG - chr1_3:74278293-74278312 Msa0140130:CDS 35.0%
GATATGAAGCTTTCAACATC+AGG - chr1_3:74278497-74278516 Msa0140130:intron 35.0%
AATGTCTGAATTCTGAGCTA+TGG - chr1_3:74278739-74278758 Msa0140130:intron 35.0%
GCATTGTGACATTATGAAGT+TGG + chr1_3:74279063-74279082 None:intergenic 35.0%
GTGTTTGTAACTATGGATGT+AGG - chr1_3:74279329-74279348 Msa0140130:CDS 35.0%
GAAGGATACATTTCTTCCTA+TGG - chr1_3:74279359-74279378 Msa0140130:CDS 35.0%
GTCTTGCAAAAATAGTTCGA+GGG + chr1_3:74279408-74279427 None:intergenic 35.0%
AGTCTTGCAAAAATAGTTCG+AGG + chr1_3:74279409-74279428 None:intergenic 35.0%
CAAAGTATGAACATTACCAG+CGG + chr1_3:74279504-74279523 None:intergenic 35.0%
CCATCAAGAATCAAACACAA+AGG + chr1_3:74279527-74279546 None:intergenic 35.0%
CCTTTGTGTTTGATTCTTGA+TGG - chr1_3:74279524-74279543 Msa0140130:CDS 35.0%
! TCTTAAATTTTGGGCTACAC+AGG - chr1_3:74279562-74279581 Msa0140130:CDS 35.0%
AGCACAAGAACTAATTGCTA+GGG - chr1_3:74279604-74279623 Msa0140130:CDS 35.0%
GAAACTTCCATTCAACATCA+TGG + chr1_3:74279634-74279653 None:intergenic 35.0%
AAGTATTTCACAGGTGTCAA+AGG + chr1_3:74279774-74279793 None:intergenic 35.0%
ACAAAATTCCCTGTCAAAAC+TGG + chr1_3:74279854-74279873 None:intergenic 35.0%
! GAATTTTGTGTAAGACCTTG+AGG - chr1_3:74279865-74279884 Msa0140130:intron 35.0%
ACATTTCTGATCTTGGCATT+TGG - chr1_3:74280047-74280066 Msa0140130:intron 35.0%
CATTTCTGATCTTGGCATTT+GGG - chr1_3:74280048-74280067 Msa0140130:intron 35.0%
ATATCATTAAAGAGAACGCC+AGG - chr1_3:74280295-74280314 Msa0140130:intron 35.0%
!!! GAGTCTCTTTTTTGATGGTT+TGG - chr1_3:74280345-74280364 Msa0140130:intron 35.0%
CTTATACACACCAAGGAATA+GGG - chr1_3:74280385-74280404 Msa0140130:intron 35.0%
ACTTCGATTGGTATTGTTGT+TGG - chr1_3:74280594-74280613 Msa0140130:intron 35.0%
TATGTGGAACATGTACAAAC+AGG + chr1_3:74280681-74280700 None:intergenic 35.0%
GCATCTAATGATGAAGTTGA+TGG + chr1_3:74280774-74280793 None:intergenic 35.0%
! TGCTAGTTTATATCGGGATT+TGG + chr1_3:74280796-74280815 None:intergenic 35.0%
TAAATCCCAAACTTGAACCA+TGG - chr1_3:74280891-74280910 Msa0140130:intron 35.0%
! ACAATCCATGGTTCAAGTTT+GGG + chr1_3:74280899-74280918 None:intergenic 35.0%
TTAAAGATGCGTTTCTGTTG+TGG + chr1_3:74281098-74281117 None:intergenic 35.0%
AAATGACATGCAAGCAACAA+AGG + chr1_3:74281230-74281249 None:intergenic 35.0%
CAATCACCATATGAAAAGCA+CGG + chr1_3:74281331-74281350 None:intergenic 35.0%
AATTAATGTCCAGCTCTCAA+GGG + chr1_3:74281386-74281405 None:intergenic 35.0%
! TGAGAAGAATCAGCTTCTTT+TGG - chr1_3:74281442-74281461 Msa0140130:intron 35.0%
! GAGAAGAATCAGCTTCTTTT+GGG - chr1_3:74281443-74281462 Msa0140130:intron 35.0%
TTACTGTCTTCTACAATCCA+AGG - chr1_3:74281582-74281601 Msa0140130:intron 35.0%
AGAAATACGTGTATGGTACA+CGG + chr1_3:74281738-74281757 None:intergenic 35.0%
! TACCATACACGTATTTCTGT+TGG - chr1_3:74281740-74281759 Msa0140130:intron 35.0%
TACCAACAGAAATACGTGTA+TGG + chr1_3:74281745-74281764 None:intergenic 35.0%
!! AAACCGCTATTTTATGCGAT+CGG - chr1_3:74281986-74282005 Msa0140130:intron 35.0%
ACAAAATGAAAGTGAGACAC+GGG + chr1_3:74282084-74282103 None:intergenic 35.0%
! GTGTCTCACTTTCATTTTGT+AGG - chr1_3:74282084-74282103 Msa0140130:CDS 35.0%
AATAACAGGCATAAGTGATC+TGG - chr1_3:74282118-74282137 Msa0140130:intron 35.0%
TGAAGGTTGGGAATTTGATT+GGG + chr1_3:74282421-74282440 None:intergenic 35.0%
ATGAAGGTTGGGAATTTGAT+TGG + chr1_3:74282422-74282441 None:intergenic 35.0%
! GAATATTTTGCTGGCAAAAG+AGG + chr1_3:74282599-74282618 None:intergenic 35.0%
! CTTTTGCCAGCAAAATATTC+AGG - chr1_3:74282599-74282618 Msa0140130:intron 35.0%
TTGTGAATGTAAGCCAACAT+AGG - chr1_3:74282697-74282716 Msa0140130:intron 35.0%
GTTCTTCAATTGTCCTATGT+TGG + chr1_3:74282713-74282732 None:intergenic 35.0%
TTTATCTGCTGTGAATAGGT+TGG - chr1_3:74282951-74282970 Msa0140130:intron 35.0%
!! GAAACAATGACGGATACATT+GGG + chr1_3:74283049-74283068 None:intergenic 35.0%
AAATGTACCAAGCAAAGATG+AGG + chr1_3:74283105-74283124 None:intergenic 35.0%
! AGACTAGTTGGGAGAATTTA+TGG - chr1_3:74283483-74283502 Msa0140130:intron 35.0%
GTTTATCCAAACAGTGTCTT+AGG - chr1_3:74283840-74283859 Msa0140130:intron 35.0%
TTATCCAAACAGTGTCTTAG+GGG - chr1_3:74283842-74283861 Msa0140130:intron 35.0%
ACAAGATTCTAGGTAAGTAG+AGG + chr1_3:74283937-74283956 None:intergenic 35.0%
ACCTAGAATCTTGTTACAGA+TGG - chr1_3:74283943-74283962 Msa0140130:intron 35.0%
ACCATCTGTAACAAGATTCT+AGG + chr1_3:74283947-74283966 None:intergenic 35.0%
GTTTCCTGATTGAAGGTAAT+GGG + chr1_3:74284211-74284230 None:intergenic 35.0%
TGTTTCCTGATTGAAGGTAA+TGG + chr1_3:74284212-74284231 None:intergenic 35.0%
ATAGTTGAATTGATTGTGGC+TGG + chr1_3:74284257-74284276 None:intergenic 35.0%
GCCACAATCAATTCAACTAT+CGG - chr1_3:74284257-74284276 Msa0140130:intron 35.0%
ACCGATAGTTGAATTGATTG+TGG + chr1_3:74284261-74284280 None:intergenic 35.0%
! CAGGTTTTCTGTAAGTACTT+GGG + chr1_3:74284313-74284332 None:intergenic 35.0%
! ACAGGTTTTCTGTAAGTACT+TGG + chr1_3:74284314-74284333 None:intergenic 35.0%
ACTGTTCATTCATCAATGAC+TGG + chr1_3:74284611-74284630 None:intergenic 35.0%
AACAGTTACCACAACAATCA+TGG - chr1_3:74284625-74284644 Msa0140130:intron 35.0%
TCCAAAGTATGGAAATATGC+AGG - chr1_3:74284650-74284669 Msa0140130:intron 35.0%
ACCTGCATATTTCCATACTT+TGG + chr1_3:74284654-74284673 None:intergenic 35.0%
ATGTCACATGCACAATATTC+TGG - chr1_3:74284693-74284712 Msa0140130:intron 35.0%
TTGTTGAAGCAGTGTAATTC+GGG + chr1_3:74284824-74284843 None:intergenic 35.0%
GTTGTTGAAGCAGTGTAATT+CGG + chr1_3:74284825-74284844 None:intergenic 35.0%
AAGAACAAACAAAAGCTGTG+CGG + chr1_3:74285002-74285021 None:intergenic 35.0%
ATAGGTTTACAAATCGGGAT+CGG - chr1_3:74285055-74285074 Msa0140130:CDS 35.0%
! GGTCAAATGTTTGGAATTGA+GGG - chr1_3:74285137-74285156 Msa0140130:intron 35.0%
! GTCAAATGTTTGGAATTGAG+GGG - chr1_3:74285138-74285157 Msa0140130:intron 35.0%
GATCATTCGTGAATAACGTT+TGG - chr1_3:74285362-74285381 Msa0140130:five_prime_UTR 35.0%
TTTGTGTCAATCTGAACTTG+AGG - chr1_3:74285724-74285743 Msa0140130:five_prime_UTR 35.0%
GTAGAAGTTGGAACATTCAA+AGG + chr1_3:74285874-74285893 None:intergenic 35.0%
!!! GGAAGTGTTTTACAGTCACA+GGG + chr1_3:74277991-74278010 None:intergenic 40.0%
!!! AGGAAGTGTTTTACAGTCAC+AGG + chr1_3:74277992-74278011 None:intergenic 40.0%
CTGTAAAACACTTCCTCACT+CGG - chr1_3:74277996-74278015 Msa0140130:three_prime_UTR 40.0%
ATAGTGATAGGCCACAAAAG+AGG - chr1_3:74278028-74278047 Msa0140130:three_prime_UTR 40.0%
! AAAGTAAAGGGCCTCTTTTG+TGG + chr1_3:74278042-74278061 None:intergenic 40.0%
!!! TGGGATGTTTTGGTTGTGTT+TGG - chr1_3:74278259-74278278 Msa0140130:exon 40.0%
AAGCTTTCAACATCAGGGTT+GGG - chr1_3:74278503-74278522 Msa0140130:intron 40.0%
!!! CTCTTTTTGATGATGGTAGG+AGG - chr1_3:74278702-74278721 Msa0140130:CDS 40.0%
!!! TTTTTGATGATGGTAGGAGG+AGG - chr1_3:74278705-74278724 Msa0140130:CDS 40.0%
ACAACTAACCGAGAAATCGA+TGG - chr1_3:74278995-74279014 Msa0140130:CDS 40.0%
CAACTAACCGAGAAATCGAT+GGG - chr1_3:74278996-74279015 Msa0140130:CDS 40.0%
!! GTATTTGCCCATCGATTTCT+CGG + chr1_3:74279006-74279025 None:intergenic 40.0%
!!! TTGAGCGTGTGTTGATTTTC+AGG - chr1_3:74279177-74279196 Msa0140130:CDS 40.0%
GTCAAAGAAAACCACCATAC+CGG + chr1_3:74279256-74279275 None:intergenic 40.0%
TCAGAACACATAATGCCAAC+AGG + chr1_3:74279278-74279297 None:intergenic 40.0%
TCTGAACCTCGCTTTATCTT+TGG - chr1_3:74279293-74279312 Msa0140130:CDS 40.0%
AGTTCTCCAAAGATAAAGCG+AGG + chr1_3:74279302-74279321 None:intergenic 40.0%
! CTAGCAATTAGTTCTTGTGC+TGG + chr1_3:74279605-74279624 None:intergenic 40.0%
CAGCACAAGAACTAATTGCT+AGG - chr1_3:74279603-74279622 Msa0140130:CDS 40.0%
!! TAGGATTCTCCAGTTTTGAC+AGG - chr1_3:74279842-74279861 Msa0140130:intron 40.0%
!! AGGATTCTCCAGTTTTGACA+GGG - chr1_3:74279843-74279862 Msa0140130:intron 40.0%
GTAAGACCTTGAGGAAACTA+AGG - chr1_3:74279874-74279893 Msa0140130:intron 40.0%
! AAAGTGCCTTAGTTTCCTCA+AGG + chr1_3:74279883-74279902 None:intergenic 40.0%
!! AAAAGTATTGCTAAGCGCCT+CGG - chr1_3:74280115-74280134 Msa0140130:intron 40.0%
CATTGTAGTTCGCAATTGCA+TGG + chr1_3:74280205-74280224 None:intergenic 40.0%
TTTAACAATGGGAGCTAACC+TGG + chr1_3:74280316-74280335 None:intergenic 40.0%
! TTTGATGGTTTGGGCATGTA+TGG - chr1_3:74280355-74280374 Msa0140130:intron 40.0%
AGAAGACCTTATACACACCA+AGG - chr1_3:74280378-74280397 Msa0140130:intron 40.0%
! CCTATTCCTTGGTGTGTATA+AGG + chr1_3:74280387-74280406 None:intergenic 40.0%
CCTTATACACACCAAGGAAT+AGG - chr1_3:74280384-74280403 Msa0140130:intron 40.0%
ATCTAGTATGCCCTATTCCT+TGG + chr1_3:74280398-74280417 None:intergenic 40.0%
ACTAGACTTGTGCCATACTA+TGG - chr1_3:74280500-74280519 Msa0140130:intron 40.0%
AGCCGGATTCATAATGAGAA+AGG - chr1_3:74280540-74280559 Msa0140130:intron 40.0%
AAATCTTGGACACTCGTGAT+AGG + chr1_3:74280650-74280669 None:intergenic 40.0%
TATCACGAGTGTCCAAGATT+TGG - chr1_3:74280649-74280668 Msa0140130:intron 40.0%
ATCACGAGTGTCCAAGATTT+GGG - chr1_3:74280650-74280669 Msa0140130:intron 40.0%
AACAGGAGTTTCCCAAATCT+TGG + chr1_3:74280664-74280683 None:intergenic 40.0%
AAAAACGATGGCTACTGTTG+GGG + chr1_3:74280855-74280874 None:intergenic 40.0%
CAAAAACGATGGCTACTGTT+GGG + chr1_3:74280856-74280875 None:intergenic 40.0%
ACAAAAACGATGGCTACTGT+TGG + chr1_3:74280857-74280876 None:intergenic 40.0%
!! GTAGCCATCGTTTTTGTATG+AGG - chr1_3:74280860-74280879 Msa0140130:intron 40.0%
AGCTCCTCATACAAAAACGA+TGG + chr1_3:74280867-74280886 None:intergenic 40.0%
! CACAATCCATGGTTCAAGTT+TGG + chr1_3:74280900-74280919 None:intergenic 40.0%
TTCTGTTGTGGCAGAAAGAA+TGG + chr1_3:74281086-74281105 None:intergenic 40.0%
! TGTTGCTTGCATGTCATTTC+AGG - chr1_3:74281231-74281250 Msa0140130:intron 40.0%
!!! GTTGTAAGAAGGTGTCGTTT+TGG + chr1_3:74281261-74281280 None:intergenic 40.0%
AAACGACACCTTCTTACAAC+AGG - chr1_3:74281261-74281280 Msa0140130:intron 40.0%
! GAGATTCCGTGCTTTTCATA+TGG - chr1_3:74281322-74281341 Msa0140130:intron 40.0%
ACGGTAGCCAAAAGAGAAAA+AGG + chr1_3:74281357-74281376 None:intergenic 40.0%
ATTAATGTCCAGCTCTCAAG+GGG + chr1_3:74281385-74281404 None:intergenic 40.0%
GAATTAATGTCCAGCTCTCA+AGG + chr1_3:74281387-74281406 None:intergenic 40.0%
! GATGATGGCATTACAGTTTG+CGG + chr1_3:74281488-74281507 None:intergenic 40.0%
TCCAGTGATAGTATGCACAT+TGG - chr1_3:74281515-74281534 Msa0140130:intron 40.0%
TCCAATGTGCATACTATCAC+TGG + chr1_3:74281519-74281538 None:intergenic 40.0%
TCAGACAACATTGACAACCT+TGG + chr1_3:74281602-74281621 None:intergenic 40.0%
TGACAGTTTATATCATGGGC+AGG - chr1_3:74281666-74281685 Msa0140130:CDS 40.0%
GACAGTTTATATCATGGGCA+GGG - chr1_3:74281667-74281686 Msa0140130:CDS 40.0%
AGTGGTATGACAAACTCAGA+TGG + chr1_3:74281698-74281717 None:intergenic 40.0%
GCTGTAGTGTTGTCAAATAG+CGG - chr1_3:74281867-74281886 Msa0140130:intron 40.0%
TTGCCGATCGCATAAAATAG+CGG + chr1_3:74281992-74282011 None:intergenic 40.0%
GGCAATTGATATGTGAGAGA+AGG - chr1_3:74282007-74282026 Msa0140130:CDS 40.0%
TAAGTGATCTGGATGCTGTT+CGG - chr1_3:74282129-74282148 Msa0140130:intron 40.0%
GTTACATGCTTACGTTTCAG+AGG - chr1_3:74282371-74282390 Msa0140130:intron 40.0%
AATTCCCAACCTTCATGCAT+CGG - chr1_3:74282426-74282445 Msa0140130:intron 40.0%
GGATTAGGTCAATGCTTTCA+AGG + chr1_3:74282470-74282489 None:intergenic 40.0%
!! GGAAACAATGACGGATACAT+TGG + chr1_3:74283050-74283069 None:intergenic 40.0%
AATCTGAGGGGAAACAATGA+CGG + chr1_3:74283059-74283078 None:intergenic 40.0%
CATGTCCAAAACATAGAGAC+AGG - chr1_3:74283383-74283402 Msa0140130:intron 40.0%
TATCTACTGGCATAGACACT+TGG - chr1_3:74283459-74283478 Msa0140130:intron 40.0%
ATCTACTGGCATAGACACTT+GGG - chr1_3:74283460-74283479 Msa0140130:intron 40.0%
TACTTATGCTATACACCCTC+CGG - chr1_3:74283664-74283683 Msa0140130:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG + chr1_3:74283682-74283701 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG + chr1_3:74283683-74283702 None:intergenic 40.0%
AATTAAGCACATACACCCTC+CGG + chr1_3:74283815-74283834 None:intergenic 40.0%
AAGACCCTCAAAATAACCAC+AGG + chr1_3:74283905-74283924 None:intergenic 40.0%
AAGCAACAACTGCTCTAATG+TGG - chr1_3:74283974-74283993 Msa0140130:intron 40.0%
CTCAATTCCCTAAGCTTTCA+AGG - chr1_3:74284024-74284043 Msa0140130:intron 40.0%
AGACTCGATCCAACTTTACT+CGG - chr1_3:74284075-74284094 Msa0140130:intron 40.0%
TGATCATTCCCGAGTAAAGT+TGG + chr1_3:74284087-74284106 None:intergenic 40.0%
TCAACAATACCAAGCCATGT+TGG - chr1_3:74284110-74284129 Msa0140130:intron 40.0%
ATATCTCATGAGGCCACAAA+TGG - chr1_3:74284164-74284183 Msa0140130:CDS 40.0%
TTGTGGCTGCATCATATTAG+AGG + chr1_3:74284286-74284305 None:intergenic 40.0%
!! GTAAGTACTTGGGTTTGTTG+TGG + chr1_3:74284303-74284322 None:intergenic 40.0%
! TGGATTGTTGTTGTCTCTGA+TGG + chr1_3:74284437-74284456 None:intergenic 40.0%
!!! GGTTTTGAATATGACGGTGA+CGG + chr1_3:74284465-74284484 None:intergenic 40.0%
! TTTGGAGTCCATGATTGTTG+TGG + chr1_3:74284636-74284655 None:intergenic 40.0%
CAATCATGGACTCCAAAGTA+TGG - chr1_3:74284639-74284658 Msa0140130:intron 40.0%
AATATGCAGGTCAATGCCTT+TGG - chr1_3:74284663-74284682 Msa0140130:intron 40.0%
TGCCCAAAATCATGTTCTCT+CGG - chr1_3:74284755-74284774 Msa0140130:CDS 40.0%
! ACCCGAGAGAACATGATTTT+GGG + chr1_3:74284760-74284779 None:intergenic 40.0%
!! GGTGTCAATATCGATTCATC+TGG - chr1_3:74284777-74284796 Msa0140130:CDS 40.0%
ACTGGTGCATCAACACAATT+AGG - chr1_3:74284849-74284868 Msa0140130:intron 40.0%
CTGGTGCATCAACACAATTA+GGG - chr1_3:74284850-74284869 Msa0140130:intron 40.0%
TGGTGCATCAACACAATTAG+GGG - chr1_3:74284851-74284870 Msa0140130:intron 40.0%
TGAAGATGAATCTTGCATGC+AGG + chr1_3:74284904-74284923 None:intergenic 40.0%
!!! ATGTTGGGTTCTGGTTTTGT+GGG + chr1_3:74284953-74284972 None:intergenic 40.0%
!!! AATGTTGGGTTCTGGTTTTG+TGG + chr1_3:74284954-74284973 None:intergenic 40.0%
CCTTTACAAATGTTGGGTTC+TGG + chr1_3:74284962-74284981 None:intergenic 40.0%
CCAGAACCCAACATTTGTAA+AGG - chr1_3:74284959-74284978 Msa0140130:CDS 40.0%
TTTACAAATCGGGATCGGTT+GGG - chr1_3:74285060-74285079 Msa0140130:CDS 40.0%
! GGGTCAAATGTTTGGAATTG+AGG - chr1_3:74285136-74285155 Msa0140130:intron 40.0%
TTAGAAGACCCTCTTAGATC+AGG - chr1_3:74285164-74285183 Msa0140130:intron 40.0%
AAATTCAGCGAAAGTCTTGG+TGG + chr1_3:74285272-74285291 None:intergenic 40.0%
ACCGGAAGATATTCAGAAGA+TGG - chr1_3:74285402-74285421 Msa0140130:five_prime_UTR 40.0%
CCCATCTTCTGAATATCTTC+CGG + chr1_3:74285406-74285425 None:intergenic 40.0%
CCGGAAGATATTCAGAAGAT+GGG - chr1_3:74285403-74285422 Msa0140130:five_prime_UTR 40.0%
TATTCAGAAGATGGGAGATC+AGG - chr1_3:74285411-74285430 Msa0140130:five_prime_UTR 40.0%
GAATCTCACCACATTGTTTC+TGG - chr1_3:74285484-74285503 Msa0140130:five_prime_UTR 40.0%
TAATCAAGTGAGCCAATCGA+TGG + chr1_3:74285517-74285536 None:intergenic 40.0%
GATTCCCAAATGTAACCTTC+AGG - chr1_3:74285550-74285569 Msa0140130:five_prime_UTR 40.0%
GGAACCTGAAGGTTACATTT+GGG + chr1_3:74285557-74285576 None:intergenic 40.0%
TGGAACCTGAAGGTTACATT+TGG + chr1_3:74285558-74285577 None:intergenic 40.0%
! AATGTAACCTTCAGGTTCCA+CGG - chr1_3:74285558-74285577 Msa0140130:five_prime_UTR 40.0%
CAAAGAAATTGTCTTGACCG+TGG + chr1_3:74285578-74285597 None:intergenic 40.0%
GCTTGTACTTGTGTACTCTA+AGG - chr1_3:74285797-74285816 Msa0140130:five_prime_UTR 40.0%
! TGTACTTGTGTACTCTAAGG+AGG - chr1_3:74285800-74285819 Msa0140130:five_prime_UTR 40.0%
GAAGTTGGAACATTCAAAGG+AGG + chr1_3:74285871-74285890 None:intergenic 40.0%
CGGTCTCAATCGATAGTGAT+AGG - chr1_3:74278016-74278035 Msa0140130:three_prime_UTR 45.0%
!! AACTGGGTCATGCTGTTTCT+GGG - chr1_3:74278130-74278149 Msa0140130:three_prime_UTR 45.0%
GAGTGGTAGAGTTAGTGCAT+TGG - chr1_3:74278310-74278329 Msa0140130:CDS 45.0%
GAAGCTTTCAACATCAGGGT+TGG - chr1_3:74278502-74278521 Msa0140130:intron 45.0%
GGTGGCAAACTAGGGTAATT+TGG + chr1_3:74279028-74279047 None:intergenic 45.0%
TGAAGTTGGCAAACCAACTG+AGG + chr1_3:74279049-74279068 None:intergenic 45.0%
! GGTGGTTTTCTTTGACCTGT+TGG - chr1_3:74279260-74279279 Msa0140130:CDS 45.0%
ATGGATGTAGGAAGAGCAGA+AGG - chr1_3:74279341-74279360 Msa0140130:CDS 45.0%
CTTGGAATGCCCAATTCCAT+AGG + chr1_3:74279378-74279397 None:intergenic 45.0%
GTATGAACATTACCAGCGGA+GGG + chr1_3:74279500-74279519 None:intergenic 45.0%
AGTATGAACATTACCAGCGG+AGG + chr1_3:74279501-74279520 None:intergenic 45.0%
! GCAATTAGTTCTTGTGCTGG+TGG + chr1_3:74279602-74279621 None:intergenic 45.0%
GGGATCTCCATGATGTTGAA+TGG - chr1_3:74279624-74279643 Msa0140130:CDS 45.0%
CTTTAGTAGTCAGTGCTGTC+TGG - chr1_3:74279899-74279918 Msa0140130:intron 45.0%
!! AAAGTATTGCTAAGCGCCTC+GGG - chr1_3:74280116-74280135 Msa0140130:intron 45.0%
! TGTTTTGCATTATGGACCCG+AGG + chr1_3:74280135-74280154 None:intergenic 45.0%
ATATAACTAGAGAGCGGCCA+AGG - chr1_3:74280429-74280448 Msa0140130:intron 45.0%
AGCGGCCAAGGAAAACAATT+AGG - chr1_3:74280441-74280460 Msa0140130:intron 45.0%
AGCTGGGCAATTCCATAGTA+TGG + chr1_3:74280515-74280534 None:intergenic 45.0%
TGTGAAGAAGGGACTTCGAT+TGG - chr1_3:74280582-74280601 Msa0140130:intron 45.0%
ACAGTTCAGAGTTCGAAGGT+TGG + chr1_3:74280832-74280851 None:intergenic 45.0%
AGTGCTAAGAGACTTGTAGC+TGG - chr1_3:74281300-74281319 Msa0140130:intron 45.0%
TCACTGGACAGAACAGATGA+TGG + chr1_3:74281503-74281522 None:intergenic 45.0%
TTTCTGTTGGTATGCGCTTC+AGG - chr1_3:74281753-74281772 Msa0140130:intron 45.0%
CTGATGTCTACATGTACCTG+CGG + chr1_3:74281808-74281827 None:intergenic 45.0%
CGCATATCACGGAACAATAG+TGG + chr1_3:74281905-74281924 None:intergenic 45.0%
AGGTACATGGGCACAATAAC+AGG - chr1_3:74282104-74282123 Msa0140130:intron 45.0%
! ACAGAGCGCCAATGAGAATT+CGG + chr1_3:74282158-74282177 None:intergenic 45.0%
TAGGCACAGTCAACAGAACA+AGG + chr1_3:74282294-74282313 None:intergenic 45.0%
! TGTTCTGTTGACTGTGCCTA+AGG - chr1_3:74282294-74282313 Msa0140130:CDS 45.0%
GATACCGATGCATGAAGGTT+GGG + chr1_3:74282433-74282452 None:intergenic 45.0%
AGATACCGATGCATGAAGGT+TGG + chr1_3:74282434-74282453 None:intergenic 45.0%
AAGCAGATACCGATGCATGA+AGG + chr1_3:74282438-74282457 None:intergenic 45.0%
! CCTGAAATGACGTTGACTGA+AGG + chr1_3:74282525-74282544 None:intergenic 45.0%
CCTTCAGTCAACGTCATTTC+AGG - chr1_3:74282522-74282541 Msa0140130:CDS 45.0%
! TCTGCTGTGAATAGGTTGGA+TGG - chr1_3:74282955-74282974 Msa0140130:intron 45.0%
! CTGCTGTGAATAGGTTGGAT+GGG - chr1_3:74282956-74282975 Msa0140130:intron 45.0%
ATTTCCCATAATGACACCCG+TGG + chr1_3:74283008-74283027 None:intergenic 45.0%
CATGGACGTTTCAATCTGAG+GGG + chr1_3:74283071-74283090 None:intergenic 45.0%
CCATGGACGTTTCAATCTGA+GGG + chr1_3:74283072-74283091 None:intergenic 45.0%
TAGACACTTGGGAGACTAGT+TGG - chr1_3:74283471-74283490 Msa0140130:intron 45.0%
! AGACACTTGGGAGACTAGTT+GGG - chr1_3:74283472-74283491 Msa0140130:intron 45.0%
TTGCTTATACTAGTGACCGG+AGG - chr1_3:74283796-74283815 Msa0140130:intron 45.0%
TGCTTATACTAGTGACCGGA+GGG - chr1_3:74283797-74283816 Msa0140130:intron 45.0%
ATGACCCCTAAGACACTGTT+TGG + chr1_3:74283849-74283868 None:intergenic 45.0%
!!! CCACAGGTTTTTTTGGGAAG+AGG + chr1_3:74283889-74283908 None:intergenic 45.0%
CCTCTTCCCAAAAAAACCTG+TGG - chr1_3:74283886-74283905 Msa0140130:intron 45.0%
ACTGCTCTAATGTGGATGAG+AGG - chr1_3:74283982-74284001 Msa0140130:intron 45.0%
AGCTTAGGGAATTGAGACCT+TGG + chr1_3:74284020-74284039 None:intergenic 45.0%
ACCAGCACCTTGAAAGCTTA+GGG + chr1_3:74284034-74284053 None:intergenic 45.0%
TACCAGCACCTTGAAAGCTT+AGG + chr1_3:74284035-74284054 None:intergenic 45.0%
GACTCGATCCAACTTTACTC+GGG - chr1_3:74284076-74284095 Msa0140130:intron 45.0%
!! TGGGTAGTGGATATCTCATG+AGG - chr1_3:74284154-74284173 Msa0140130:CDS 45.0%
!! CCTGATTGAAGGTAATGGGT+AGG + chr1_3:74284207-74284226 None:intergenic 45.0%
CCTACCCATTACCTTCAATC+AGG - chr1_3:74284204-74284223 Msa0140130:intron 45.0%
! CATGTTGCTGTTGTTGAGCT+TGG + chr1_3:74284377-74284396 None:intergenic 45.0%
AGAGATTGCCAGTTCCTTCA+GGG + chr1_3:74284560-74284579 None:intergenic 45.0%
AAGAGATTGCCAGTTCCTTC+AGG + chr1_3:74284561-74284580 None:intergenic 45.0%
CTATCGAGTCTAACGAGAAG+TGG - chr1_3:74284585-74284604 Msa0140130:intron 45.0%
GCATCTGAATCACAATGTGG+AGG + chr1_3:74284738-74284757 None:intergenic 45.0%
TGGGCATCTGAATCACAATG+TGG + chr1_3:74284741-74284760 None:intergenic 45.0%
GCCCAAAATCATGTTCTCTC+GGG - chr1_3:74284756-74284775 Msa0140130:CDS 45.0%
! CACCCGAGAGAACATGATTT+TGG + chr1_3:74284761-74284780 None:intergenic 45.0%
ACTGCTTCAACAACTGACAC+TGG - chr1_3:74284831-74284850 Msa0140130:intron 45.0%
TCAACACAATTAGGGGAGTC+TGG - chr1_3:74284858-74284877 Msa0140130:intron 45.0%
GTTTACAAATCGGGATCGGT+TGG - chr1_3:74285059-74285078 Msa0140130:CDS 45.0%
GAGGAGTTGGGTCAAATGTT+TGG - chr1_3:74285128-74285147 Msa0140130:intron 45.0%
GAGAATGATGTGCTTCTCCT+TGG - chr1_3:74285212-74285231 Msa0140130:intron 45.0%
GAAACCGATACTTACTCCCA+CGG + chr1_3:74285245-74285264 None:intergenic 45.0%
CGCAAATTCAGCGAAAGTCT+TGG + chr1_3:74285275-74285294 None:intergenic 45.0%
GTGGTTGTCCAGAAACAATG+TGG + chr1_3:74285495-74285514 None:intergenic 45.0%
!!! AAATTAATTTTTTAGTTAAA+TGG - chr1_3:74283256-74283275 Msa0140130:intron 5.0%
!!! TTATTATTAATTATTTTCTT+TGG - chr1_3:74285602-74285621 Msa0140130:five_prime_UTR 5.0%
!!! TATTATTAATTATTTTCTTT+GGG - chr1_3:74285603-74285622 Msa0140130:five_prime_UTR 5.0%
! CTATCGATTGAGACCGAGTG+AGG + chr1_3:74278012-74278031 None:intergenic 50.0%
TCGTGCAGGTTAAGTCCAAC+TGG - chr1_3:74278113-74278132 Msa0140130:three_prime_UTR 50.0%
CGTGCAGGTTAAGTCCAACT+GGG - chr1_3:74278114-74278133 Msa0140130:three_prime_UTR 50.0%
CAGAAACAGCATGACCCAGT+TGG + chr1_3:74278131-74278150 None:intergenic 50.0%
!! CAACTGGGTCATGCTGTTTC+TGG - chr1_3:74278129-74278148 Msa0140130:three_prime_UTR 50.0%
!! TTGATGATGGTAGGAGGAGG+AGG - chr1_3:74278708-74278727 Msa0140130:CDS 50.0%
!! TGATGATGGTAGGAGGAGGA+GGG - chr1_3:74278709-74278728 Msa0140130:CDS 50.0%
TGAGCTATGGCATGCATGTG+CGG - chr1_3:74278752-74278771 Msa0140130:intron 50.0%
!! GCAGTTGGTAGGGACACTAA+GGG + chr1_3:74278780-74278799 None:intergenic 50.0%
!! TGCAGTTGGTAGGGACACTA+AGG + chr1_3:74278781-74278800 None:intergenic 50.0%
TTAGTGTCCCTACCAACTGC+AGG - chr1_3:74278780-74278799 Msa0140130:intron 50.0%
! ACGAGTTCCTGCAGTTGGTA+GGG + chr1_3:74278790-74278809 None:intergenic 50.0%
TCGTGTGGTTTACTTCCCTC+AGG - chr1_3:74278806-74278825 Msa0140130:intron 50.0%
CGTGTGGTTTACTTCCCTCA+GGG - chr1_3:74278807-74278826 Msa0140130:intron 50.0%
! GGTTAGTTGTAGCAGACACC+TGG + chr1_3:74278985-74279004 None:intergenic 50.0%
CCAACTGAGGTGGCAAACTA+GGG + chr1_3:74279036-74279055 None:intergenic 50.0%
ACCAACTGAGGTGGCAAACT+AGG + chr1_3:74279037-74279056 None:intergenic 50.0%
AGTTGGCAAACCAACTGAGG+TGG + chr1_3:74279046-74279065 None:intergenic 50.0%
!! GACACTACAGCCATTGACTC+CGG - chr1_3:74279234-74279253 Msa0140130:CDS 50.0%
!! TACAGCCATTGACTCCGGTA+TGG - chr1_3:74279239-74279258 Msa0140130:CDS 50.0%
AACCACCATACCGGAGTCAA+TGG + chr1_3:74279247-74279266 None:intergenic 50.0%
AGAGAATCCTCCATGTGTGC+TGG + chr1_3:74279448-74279467 None:intergenic 50.0%
! TGAGAAAGTTTTCCCTCCGC+TGG - chr1_3:74279485-74279504 Msa0140130:CDS 50.0%
AATTGCCCAGCTCATGTAGC+CGG - chr1_3:74280523-74280542 Msa0140130:intron 50.0%
TGAATCCGGCTACATGAGCT+GGG + chr1_3:74280531-74280550 None:intergenic 50.0%
ATGAATCCGGCTACATGAGC+TGG + chr1_3:74280532-74280551 None:intergenic 50.0%
! ACCATGGATTGTGACCGTGA+CGG - chr1_3:74280907-74280926 Msa0140130:intron 50.0%
TTCCTTTCAGCCAACCGTCA+CGG + chr1_3:74280924-74280943 None:intergenic 50.0%
GACACCTTCTTACAACAGGC+TGG - chr1_3:74281265-74281284 Msa0140130:intron 50.0%
TGCTCCAGCCTGTTGTAAGA+AGG + chr1_3:74281272-74281291 None:intergenic 50.0%
CAGCTCTCAAGGGGAAGAAA+CGG + chr1_3:74281376-74281395 None:intergenic 50.0%
CATTACAGTTTGCGGTCGAC+TGG + chr1_3:74281480-74281499 None:intergenic 50.0%
AGTTGCTGAAGCATGAGCAG+CGG + chr1_3:74281552-74281571 None:intergenic 50.0%
CTATAGCAGCGCTAGCATAG+CGG - chr1_3:74281954-74281973 Msa0140130:intron 50.0%
TTCGGTGGCCGAATTCTCAT+TGG - chr1_3:74282147-74282166 Msa0140130:intron 50.0%
TTCTCATTGGCGCTCTGTCA+AGG - chr1_3:74282160-74282179 Msa0140130:intron 50.0%
! TCTGTTGACTGTGCCTAAGG+AGG - chr1_3:74282297-74282316 Msa0140130:CDS 50.0%
GGATGGGATGAATCAACAGC+AGG - chr1_3:74282972-74282991 Msa0140130:intron 50.0%
!! ACAGCCACGGGTGTCATTAT+GGG - chr1_3:74283001-74283020 Msa0140130:intron 50.0%
CCCTCAGATTGAAACGTCCA+TGG - chr1_3:74283069-74283088 Msa0140130:intron 50.0%
GCCATGGACGTTTCAATCTG+AGG + chr1_3:74283073-74283092 None:intergenic 50.0%
TTGAAACGTCCATGGCATCC+TGG - chr1_3:74283077-74283096 Msa0140130:intron 50.0%
AAGAGCTGTCACAGAGCTTC+TGG + chr1_3:74283551-74283570 None:intergenic 50.0%
GCTCTAATGTGGATGAGAGG+TGG - chr1_3:74283985-74284004 Msa0140130:intron 50.0%
TCCCTAAGCTTTCAAGGTGC+TGG - chr1_3:74284030-74284049 Msa0140130:intron 50.0%
AGCAGCTGGAATGCAGAACA+TGG - chr1_3:74284134-74284153 Msa0140130:CDS 50.0%
GCAGCTGGAATGCAGAACAT+GGG - chr1_3:74284135-74284154 Msa0140130:CDS 50.0%
GGAATGCAGAACATGGGTAG+TGG - chr1_3:74284141-74284160 Msa0140130:CDS 50.0%
TGTGGCTGGTGAAGTTGCAA+AGG + chr1_3:74284243-74284262 None:intergenic 50.0%
!! TCTGAAGAAGGTGCTGAGAC+AGG + chr1_3:74284332-74284351 None:intergenic 50.0%
! ATATGACGGTGACGGCACAT+TGG + chr1_3:74284457-74284476 None:intergenic 50.0%
GTTTCCTGCTTCAGTTCCCT+CGG - chr1_3:74284509-74284528 Msa0140130:intron 50.0%
TTTCCTGCTTCAGTTCCCTC+GGG - chr1_3:74284510-74284529 Msa0140130:intron 50.0%
! CCAAGCATGTTTTGTCCCGA+GGG + chr1_3:74284528-74284547 None:intergenic 50.0%
CCTCGGGACAAAACATGCTT+GGG - chr1_3:74284526-74284545 Msa0140130:intron 50.0%
ATGTGACATTGCGCTGCCAA+AGG + chr1_3:74284682-74284701 None:intergenic 50.0%
TGTAATTCGGGACAGTGGTG+GGG + chr1_3:74284812-74284831 None:intergenic 50.0%
GTGTAATTCGGGACAGTGGT+GGG + chr1_3:74284813-74284832 None:intergenic 50.0%
AGTGTAATTCGGGACAGTGG+TGG + chr1_3:74284814-74284833 None:intergenic 50.0%
AGCAGTGTAATTCGGGACAG+TGG + chr1_3:74284817-74284836 None:intergenic 50.0%
ATTAGGGGAGTCTGGATTCC+AGG - chr1_3:74284866-74284885 Msa0140130:intron 50.0%
TTAGGGGAGTCTGGATTCCA+GGG - chr1_3:74284867-74284886 Msa0140130:intron 50.0%
TGCAGGCATATAGAGAACCC+TGG + chr1_3:74284887-74284906 None:intergenic 50.0%
GGCGTTCACTTGACATCTCT+CGG - chr1_3:74285081-74285100 Msa0140130:intron 50.0%
AAGACCCTCTTAGATCAGGC+TGG - chr1_3:74285168-74285187 Msa0140130:intron 50.0%
! GGAGAAGCACATCATTCTCC+CGG + chr1_3:74285211-74285230 None:intergenic 50.0%
CGATCCGTGGGAGTAAGTAT+CGG - chr1_3:74285238-74285257 Msa0140130:intron 50.0%
TCAGAAGATGGGAGATCAGG+CGG - chr1_3:74285414-74285433 Msa0140130:five_prime_UTR 50.0%
GATCAGGCGGTAGAAATGCA+TGG - chr1_3:74285427-74285446 Msa0140130:five_prime_UTR 50.0%
GCGGTAGAAATGCATGGACT+AGG - chr1_3:74285433-74285452 Msa0140130:five_prime_UTR 50.0%
!! GAAATGCATGGACTAGGCTC+AGG - chr1_3:74285439-74285458 Msa0140130:five_prime_UTR 50.0%
!! ATGGACTAGGCTCAGGACAA+AGG - chr1_3:74285446-74285465 Msa0140130:five_prime_UTR 50.0%
GGCTCAGGACAAAGGCTTAA+TGG - chr1_3:74285454-74285473 Msa0140130:five_prime_UTR 50.0%
GGACAAAGGCTTAATGGCAC+TGG - chr1_3:74285460-74285479 Msa0140130:five_prime_UTR 50.0%
TCTGGACAACCACCATCGAT+TGG - chr1_3:74285502-74285521 Msa0140130:five_prime_UTR 50.0%
TCAAGTGAGCCAATCGATGG+TGG + chr1_3:74285514-74285533 None:intergenic 50.0%
! GAACAACGTGTCACTCGTGC+AGG - chr1_3:74278099-74278118 Msa0140130:three_prime_UTR 55.0%
AACATCAGGGTTGGGTCAGC+AGG - chr1_3:74278511-74278530 Msa0140130:intron 55.0%
ACATCAGGGTTGGGTCAGCA+GGG - chr1_3:74278512-74278531 Msa0140130:intron 55.0%
TTGGGTCAGCAGGGACATGA+AGG - chr1_3:74278521-74278540 Msa0140130:intron 55.0%
! GATGATGGTAGGAGGAGGAG+GGG - chr1_3:74278710-74278729 Msa0140130:CDS 55.0%
GAGCTATGGCATGCATGTGC+GGG - chr1_3:74278753-74278772 Msa0140130:intron 55.0%
AGCTATGGCATGCATGTGCG+GGG - chr1_3:74278754-74278773 Msa0140130:intron 55.0%
CACGAGTTCCTGCAGTTGGT+AGG + chr1_3:74278791-74278810 None:intergenic 55.0%
ACCAACTGCAGGAACTCGTG+TGG - chr1_3:74278791-74278810 Msa0140130:intron 55.0%
ACCACACGAGTTCCTGCAGT+TGG + chr1_3:74278795-74278814 None:intergenic 55.0%
CCTGCTCACTATGACCCTGA+GGG + chr1_3:74278824-74278843 None:intergenic 55.0%
ACCTGCTCACTATGACCCTG+AGG + chr1_3:74278825-74278844 None:intergenic 55.0%
! CCCTAGTTTGCCACCTCAGT+TGG - chr1_3:74279033-74279052 Msa0140130:CDS 55.0%
!! AGCCATTGACTCCGGTATGG+TGG - chr1_3:74279242-74279261 Msa0140130:CDS 55.0%
TAGTTCGAGGGCTGCTTGCT+TGG + chr1_3:74279396-74279415 None:intergenic 55.0%
!! TCCATGTGTGCTGGTGTCAC+TGG + chr1_3:74279439-74279458 None:intergenic 55.0%
AGTGACACCAGCACACATGG+AGG - chr1_3:74279438-74279457 Msa0140130:CDS 55.0%
GGGGACAGTTCAGAGTTCGA+AGG + chr1_3:74280836-74280855 None:intergenic 55.0%
ACCGTCACGGTCACAATCCA+TGG + chr1_3:74280911-74280930 None:intergenic 55.0%
TGGATTGTGACCGTGACGGT+TGG - chr1_3:74280911-74280930 Msa0140130:intron 55.0%
CGTTTCTTCCCCTTGAGAGC+TGG - chr1_3:74281374-74281393 Msa0140130:intron 55.0%
CTGAAGAGTCAAGTGTCCGC+AGG - chr1_3:74281789-74281808 Msa0140130:intron 55.0%
GTGATCTGGATGCTGTTCGG+TGG - chr1_3:74282132-74282151 Msa0140130:intron 55.0%
!! GACAGCCACGGGTGTCATTA+TGG - chr1_3:74283000-74283019 Msa0140130:intron 55.0%
! CCAAGCAAAGATGAGGTGCC+AGG + chr1_3:74283098-74283117 None:intergenic 55.0%
CCTGGCACCTCATCTTTGCT+TGG - chr1_3:74283095-74283114 Msa0140130:intron 55.0%
AGAGGTGGAACTGCAGACCA+AGG - chr1_3:74284000-74284019 Msa0140130:intron 55.0%
!! AAGGTGCTGGTATGTTGCCC+TGG - chr1_3:74284043-74284062 Msa0140130:intron 55.0%
TCGAGTCTCTGCTGCATCCA+GGG + chr1_3:74284063-74284082 None:intergenic 55.0%
ATCGAGTCTCTGCTGCATCC+AGG + chr1_3:74284064-74284083 None:intergenic 55.0%
CATTCCAGCTGCTGCCAACA+TGG + chr1_3:74284127-74284146 None:intergenic 55.0%
CCCTCGGGACAAAACATGCT+TGG - chr1_3:74284525-74284544 Msa0140130:intron 55.0%
! CCCAAGCATGTTTTGTCCCG+AGG + chr1_3:74284529-74284548 None:intergenic 55.0%
TCGCTTTGCCCTGAAGGAAC+TGG - chr1_3:74284549-74284568 Msa0140130:CDS 55.0%
GCTGCCAGCCTGATCTAAGA+GGG + chr1_3:74285175-74285194 None:intergenic 55.0%
AGCTGCCAGCCTGATCTAAG+AGG + chr1_3:74285176-74285195 None:intergenic 55.0%
GTCTTGACCGTGGAACCTGA+AGG + chr1_3:74285568-74285587 None:intergenic 55.0%
CCCTCAGGGTCATAGTGAGC+AGG - chr1_3:74278821-74278840 Msa0140130:CDS 60.0%
GCCAGTGACACCAGCACACA+TGG - chr1_3:74279435-74279454 Msa0140130:CDS 60.0%
ACTTTCTCAGCTGCGCGACG+AGG + chr1_3:74279474-74279493 None:intergenic 60.0%
! GACCGTGACGGTTGGCTGAA+AGG - chr1_3:74280919-74280938 Msa0140130:intron 60.0%
ACTGTGCCTAAGGAGGAGCG+CGG - chr1_3:74282304-74282323 Msa0140130:CDS 60.0%
CAGCAGGAGAGAGACAGCCA+CGG - chr1_3:74282988-74283007 Msa0140130:intron 60.0%
AGCAGGAGAGAGACAGCCAC+GGG - chr1_3:74282989-74283008 Msa0140130:intron 60.0%
! GATGAGGTGCCAGGATGCCA+TGG + chr1_3:74283089-74283108 None:intergenic 60.0%
CAGCTGCTGCCAACATGGCT+TGG + chr1_3:74284122-74284141 None:intergenic 60.0%
CAAGCCATGTTGGCAGCAGC+TGG - chr1_3:74284120-74284139 Msa0140130:intron 60.0%
TGTCCCGAGGGAACTGAAGC+AGG + chr1_3:74284516-74284535 None:intergenic 60.0%
! CTTGGGTCGCTTTGCCCTGA+AGG - chr1_3:74284543-74284562 Msa0140130:intron 60.0%
CTGCTATCGTGAGCTGCGAG+AGG - chr1_3:74285109-74285128 Msa0140130:intron 60.0%
TCGTGAGCTGCGAGAGGAGT+TGG - chr1_3:74285115-74285134 Msa0140130:intron 60.0%
CGTGAGCTGCGAGAGGAGTT+GGG - chr1_3:74285116-74285135 Msa0140130:intron 60.0%
GGCAGCTTGTGTTCGTCGAC+CGG - chr1_3:74285189-74285208 Msa0140130:intron 60.0%
GCAGCTTGTGTTCGTCGACC+GGG - chr1_3:74285190-74285209 Msa0140130:intron 60.0%
TTCTCCTTGGCGACGATCCG+TGG - chr1_3:74285225-74285244 Msa0140130:intron 60.0%
TCTCCTTGGCGACGATCCGT+GGG - chr1_3:74285226-74285245 Msa0140130:intron 60.0%
GGAAGACCGCGCTCCTCCTT+AGG + chr1_3:74282313-74282332 None:intergenic 65.0%
ACTCCCACGGATCGTCGCCA+AGG + chr1_3:74285232-74285251 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 74277884 74285917 74277884 ID=Msa0140130;Name=Msa0140130
chr1_3 mRNA 74277884 74285917 74277884 ID=Msa0140130-mRNA-1;Parent=Msa0140130;Name=Msa0140130-mRNA-1;_AED=0.05;_eAED=0.05;_QI=616|1|1|1|1|1|14|377|850
chr1_3 exon 74277884 74278438 74277884 ID=Msa0140130-mRNA-1:exon:25807;Parent=Msa0140130-mRNA-1
chr1_3 exon 74278552 74278742 74278552 ID=Msa0140130-mRNA-1:exon:25806;Parent=Msa0140130-mRNA-1
chr1_3 exon 74278821 74279839 74278821 ID=Msa0140130-mRNA-1:exon:25805;Parent=Msa0140130-mRNA-1
chr1_3 exon 74280685 74280832 74280685 ID=Msa0140130-mRNA-1:exon:25804;Parent=Msa0140130-mRNA-1
chr1_3 exon 74281620 74281695 74281620 ID=Msa0140130-mRNA-1:exon:25803;Parent=Msa0140130-mRNA-1
chr1_3 exon 74281991 74282113 74281991 ID=Msa0140130-mRNA-1:exon:25802;Parent=Msa0140130-mRNA-1
chr1_3 exon 74282198 74282362 74282198 ID=Msa0140130-mRNA-1:exon:25801;Parent=Msa0140130-mRNA-1
chr1_3 exon 74282458 74282548 74282458 ID=Msa0140130-mRNA-1:exon:25800;Parent=Msa0140130-mRNA-1
chr1_3 exon 74284133 74284217 74284133 ID=Msa0140130-mRNA-1:exon:25799;Parent=Msa0140130-mRNA-1
chr1_3 exon 74284295 74284450 74284295 ID=Msa0140130-mRNA-1:exon:25798;Parent=Msa0140130-mRNA-1
chr1_3 exon 74284546 74284602 74284546 ID=Msa0140130-mRNA-1:exon:25797;Parent=Msa0140130-mRNA-1
chr1_3 exon 74284717 74284815 74284717 ID=Msa0140130-mRNA-1:exon:25796;Parent=Msa0140130-mRNA-1
chr1_3 exon 74284959 74285080 74284959 ID=Msa0140130-mRNA-1:exon:25795;Parent=Msa0140130-mRNA-1
chr1_3 exon 74285259 74285917 74285259 ID=Msa0140130-mRNA-1:exon:25794;Parent=Msa0140130-mRNA-1
chr1_3 five_prime_UTR 74285302 74285917 74285302 ID=Msa0140130-mRNA-1:five_prime_utr;Parent=Msa0140130-mRNA-1
chr1_3 CDS 74285259 74285301 74285259 ID=Msa0140130-mRNA-1:cds;Parent=Msa0140130-mRNA-1
chr1_3 CDS 74284959 74285080 74284959 ID=Msa0140130-mRNA-1:cds;Parent=Msa0140130-mRNA-1
chr1_3 CDS 74284717 74284815 74284717 ID=Msa0140130-mRNA-1:cds;Parent=Msa0140130-mRNA-1
chr1_3 CDS 74284546 74284602 74284546 ID=Msa0140130-mRNA-1:cds;Parent=Msa0140130-mRNA-1
chr1_3 CDS 74284295 74284450 74284295 ID=Msa0140130-mRNA-1:cds;Parent=Msa0140130-mRNA-1
chr1_3 CDS 74284133 74284217 74284133 ID=Msa0140130-mRNA-1:cds;Parent=Msa0140130-mRNA-1
chr1_3 CDS 74282458 74282548 74282458 ID=Msa0140130-mRNA-1:cds;Parent=Msa0140130-mRNA-1
chr1_3 CDS 74282198 74282362 74282198 ID=Msa0140130-mRNA-1:cds;Parent=Msa0140130-mRNA-1
chr1_3 CDS 74281991 74282113 74281991 ID=Msa0140130-mRNA-1:cds;Parent=Msa0140130-mRNA-1
chr1_3 CDS 74281620 74281695 74281620 ID=Msa0140130-mRNA-1:cds;Parent=Msa0140130-mRNA-1
chr1_3 CDS 74280685 74280832 74280685 ID=Msa0140130-mRNA-1:cds;Parent=Msa0140130-mRNA-1
chr1_3 CDS 74278821 74279839 74278821 ID=Msa0140130-mRNA-1:cds;Parent=Msa0140130-mRNA-1
chr1_3 CDS 74278552 74278742 74278552 ID=Msa0140130-mRNA-1:cds;Parent=Msa0140130-mRNA-1
chr1_3 CDS 74278261 74278438 74278261 ID=Msa0140130-mRNA-1:cds;Parent=Msa0140130-mRNA-1
chr1_3 three_prime_UTR 74277884 74278260 74277884 ID=Msa0140130-mRNA-1:three_prime_utr;Parent=Msa0140130-mRNA-1
Gene Sequence

>Msa0140130

ATGAAGCTTTCAACATCAGGGTTGGGTCAGCAGGGACATGAAGGAGGAGGAGGGGAGAAGAAATGTCTGAATTCTGAGCTATGGCATGCATGTGCGGGGCCCTTAGTGTCCCTACCAACTGCAGGAACTCGTGTGGTTTACTTCCCTCAGGGTCATAGTGAGCAGGTGTCTGCTACAACTAACCGAGAAATCGATGGGCAAATACCAAATTACCCTAGTTTGCCACCTCAGTTGGTTTGCCAACTTCATAATGTCACAATGCATGCAGATGTTGAAACAGATGAAGTGTATGCTCAAATGACACTACAGCCATTGACTCCGGAAGAGCAGAAGGATACATTTCTTCCTATGGAATTGGGCATTCCAAGCAAGCAGCCCTCGAACTATTTTTGCAAGACTTTGACAGCCAGTGACACCAGCACACATGGAGGATTCTCTGTTCCTCGTCGCGCAGCTGAGAAAGTTTTCCCTCCGCTGGATTTCTCACAACAACCACCAGCACAAGAACTAATTGCTAGGGATCTCCATGATGTTGAATGGAAGTTTCGACATATTTTTCGAGGACAGCCAAAACGACACCTTCTTACAACAGGCTGGAGCATATTTGTTAGTGCTAAGAGACTTGTAGCTGGAGATTCCGTGCTTTTCATATGGAATGAGAAGAATCAGCTTCTTTTGGGAATACGTCGAGCCAGTCGACCGCAAACTGTAATGCCATCATCTGTTCTGTCCAGTGATAGTATGCACATTGGACTTCTTGCAGCCGCTGCTCATGCTTCAGCAACTAATAGCTGTTTTACTGTCTTCTACAATCCAAGGGCTAGTCCATCTGAGTTTGTCATACCACTTTCAAAATATATCAAAGCCGTGTACCATACACGTATTTCTGTTGGTATGCGCTTCAGGATGCTCTTTGAGACTGAAGAGTCAAGTGTCCGCAGGTACATGGGCACAATAACAGGCATAAGTGATCTGGATGCTGTTCGGTGGCCGAATTCTCATTGGCGCTCTGTCAAGGTTGGATGGGATGAATCAACAGCAGGAGAGAGACAGCCACGGGTGTCATTATGGGAAATTGAGCCTTTAACAACATTCCCAATGTATCCGTCATTGTTTCCCCTCAGATTGAAACGTCCATGGCATCCTGGCACCTCATCTTTGCTTGATGGTAGAGACGAAGCAACAACTGCTCTAATGTGGATGAGAGGTGGAACTGCAGACCAAGGTCTCAATTCCCTAAGCTTTCAAGGTGCTGGTATGTTGCCCTGGATGCAGCAGAGACTCGATCCAACTTTACTCGGGAATGATCAGAATCAACAATACCAAGCCATGTTGGCAGCAGCTGGAATGCAGAACATGGGTAGTGGATATCTCATGAGGCCACAAATGGTGAATTTTCAACAACAGCCTACCCATTACCTTCAATCAGGAAACAATAATTCACCTTTGCAACTTCACCAGCCACAATCAATTCAACTATCGGTGTCCTCTAATATGATGCAGCCACAACAAACCCAAGTACTTACAGAAAACCTGTCTCAGCACCTTCTTCAGAAACCAAGTAATAATCAAGAACTCCAAGCTCAACAACAGCAACATGCATATCAAGATACACTTCTTGTTCAAAATGATCAGCTCCATCAGAGACAACAACAATCCAATGTGCCGTCACCGTCATATTCAAAACCAGATTTTCTGGATTCAAACATTAAGTTTCCTGCTTCAGTTCCCTCGGGACAAAACATGCTTGGGTCGCTTTGCCCTGAAGGAACTGGCAATCTCTTGAATCTATCGAGTCTAACGAGAAGTGGCCAGTCATTGATGAATGAACAGTTACCACAACAATCATGGACTCCAAAGTATGGAAATATGCAGGTCAATGCCTTTGGCAGCGCAATGTCACATGCACAATATTCTGGAAAAGATTCAGCTATAGTGCCTCCACATTGTGATTCAGATGCCCAAAATCATGTTCTCTCGGGTGTCAATATCGATTCATCTGGTCTTCTACTCCCCACCACTGTCCCGAATTACACTGCTTCAACAACTGACACTGGTGCATCAACACAATTAGGGGAGTCTGGATTCCAGGGTTCTCTATATGCCTGCATGCAAGATTCATCTTCATATTTGCAAAATGCAGAGCAAATCGACCCACAAAACCAGAACCCAACATTTGTAAAGGTTTACAAATCGGGATCGGTTGGGCGTTCACTTGACATCTCTCGGTTCAGCTGCTATCGTGAGCTGCGAGAGGAGTTGGGTCAAATGTTTGGAATTGAGGGGAAGTTAGAAGACCCTCTTAGATCAGGCTGGCAGCTTGTGTTCGTCGACCGGGAGAATGATGTGCTTCTCCTTGGCGACGATCCGTGGGAATCATTCGTGAATAACGTTTGGTATATCAAAATACTTTCACCGGAAGATATTCAGAAGATGGGAGATCAGGCGGTAGAAATGCATGGACTAGGCTCAGGACAAAGGCTTAATGGCACTGGTGAATCTCACCACATTGTTTCTGGACAACCACCATCGATTGGCTCACTTGATTACTGA
Protein sequence

>Msa0140130

MKLSTSGLGQQGHEGGGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREIDGQIPNYPSLPPQLVCQLHNVTMHADVETDEVYAQMTLQPLTPEEQKDTFLPMELGIPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHASATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDAVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGTSSLLDGRDEATTALMWMRGGTADQGLNSLSFQGAGMLPWMQQRLDPTLLGNDQNQQYQAMLAAAGMQNMGSGYLMRPQMVNFQQQPTHYLQSGNNNSPLQLHQPQSIQLSVSSNMMQPQQTQVLTENLSQHLLQKPSNNQELQAQQQQHAYQDTLLVQNDQLHQRQQQSNVPSPSYSKPDFLDSNIKFPASVPSGQNMLGSLCPEGTGNLLNLSSLTRSGQSLMNEQLPQQSWTPKYGNMQVNAFGSAMSHAQYSGKDSAIVPPHCDSDAQNHVLSGVNIDSSGLLLPTTVPNYTASTTDTGASTQLGESGFQGSLYACMQDSSSYLQNAEQIDPQNQNPTFVKVYKSGSVGRSLDISRFSCYRELREELGQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPEDIQKMGDQAVEMHGLGSGQRLNGTGESHHIVSGQPPSIGSLDY*