Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0140130 | XP_003600594.1 | 98.471 | 850 | 12 | 1 | 1 | 850 | 1 | 849 | 0.0 | 1732 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0140130 | sp|Q9FGV1|ARFH_ARATH | 69.581 | 835 | 210 | 15 | 1 | 825 | 1 | 801 | 0.0 | 1090 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0140130 | G7J7V1 | 98.471 | 850 | 12 | 1 | 1 | 850 | 1 | 849 | 0.0 | 1732 |
Gene ID | Type | Classification |
---|---|---|
Msa0140130 | TF | B3-ARF |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0002580 | Msa0140130 | 0.800915 | 1.151691e-48 | -8.615850e-47 |
Msa0003080 | Msa0140130 | 0.810919 | 9.070435e-51 | -8.615850e-47 |
Msa0015570 | Msa0140130 | 0.834338 | 3.176086e-56 | -8.615850e-47 |
Msa0017670 | Msa0140130 | 0.853072 | 3.043028e-61 | -8.615850e-47 |
Msa0017930 | Msa0140130 | 0.800846 | 1.189991e-48 | -8.615850e-47 |
Msa0025160 | Msa0140130 | 0.815698 | 8.089214e-52 | -8.615850e-47 |
Msa0035380 | Msa0140130 | 0.812148 | 4.903937e-51 | -8.615850e-47 |
Msa0042640 | Msa0140130 | 0.844015 | 9.819916e-59 | -8.615850e-47 |
Msa0048510 | Msa0140130 | 0.807303 | 5.398499e-50 | -8.615850e-47 |
Msa0050660 | Msa0140130 | 0.838190 | 3.331134e-57 | -8.615850e-47 |
Msa0050700 | Msa0140130 | 0.839221 | 1.803832e-57 | -8.615850e-47 |
Msa0050790 | Msa0140130 | 0.836673 | 8.153055e-57 | -8.615850e-47 |
Msa0067060 | Msa0140130 | 0.826353 | 2.842072e-54 | -8.615850e-47 |
Msa0072520 | Msa0140130 | 0.817126 | 3.875152e-52 | -8.615850e-47 |
Msa0075530 | Msa0140130 | 0.817717 | 2.853438e-52 | -8.615850e-47 |
Msa0081980 | Msa0140130 | 0.813074 | 3.076731e-51 | -8.615850e-47 |
Msa0089460 | Msa0140130 | 0.826051 | 3.352724e-54 | -8.615850e-47 |
Msa0094570 | Msa0140130 | 0.808194 | 3.492011e-50 | -8.615850e-47 |
Msa0094790 | Msa0140130 | 0.843714 | 1.182463e-58 | -8.615850e-47 |
Msa0098040 | Msa0140130 | 0.830152 | 3.449148e-55 | -8.615850e-47 |
Msa0102240 | Msa0140130 | 0.810680 | 1.021862e-50 | -8.615850e-47 |
Msa0112670 | Msa0140130 | 0.816490 | 5.383418e-52 | -8.615850e-47 |
Msa0121330 | Msa0140130 | 0.821980 | 3.025798e-53 | -8.615850e-47 |
Msa0123070 | Msa0140130 | 0.807926 | 3.981483e-50 | -8.615850e-47 |
Msa0128460 | Msa0140130 | 0.803627 | 3.185116e-49 | -8.615850e-47 |
Msa0140130 | Msa0140280 | 0.845278 | 4.486518e-59 | -8.615850e-47 |
Msa0140130 | Msa0141640 | 0.836471 | 9.178426e-57 | -8.615850e-47 |
Msa0140130 | Msa0146650 | 0.812063 | 5.119469e-51 | -8.615850e-47 |
Msa0140130 | Msa0156050 | 0.821305 | 4.332383e-53 | -8.615850e-47 |
Msa0140130 | Msa0156090 | 0.814259 | 1.687816e-51 | -8.615850e-47 |
Msa0140130 | Msa0159590 | 0.807419 | 5.101951e-50 | -8.615850e-47 |
Msa0140130 | Msa0168050 | 0.800769 | 1.233811e-48 | -8.615850e-47 |
Msa0140130 | Msa0174290 | 0.829589 | 4.729701e-55 | -8.615850e-47 |
Msa0140130 | Msa0176060 | 0.818959 | 1.492851e-52 | -8.615850e-47 |
Msa0140130 | Msa0178450 | 0.857081 | 2.081267e-62 | -8.615850e-47 |
Msa0140130 | Msa0185290 | 0.808474 | 3.042120e-50 | -8.615850e-47 |
Msa0140130 | Msa0188610 | 0.845486 | 3.941249e-59 | -8.615850e-47 |
Msa0140130 | Msa0200050 | 0.815049 | 1.127791e-51 | -8.615850e-47 |
Msa0140130 | Msa0203080 | 0.827447 | 1.556825e-54 | -8.615850e-47 |
Msa0140130 | Msa0225610 | 0.806888 | 6.609900e-50 | -8.615850e-47 |
Msa0140130 | Msa0230800 | 0.823314 | 1.481018e-53 | -8.615850e-47 |
Msa0140130 | Msa0230840 | 0.819359 | 1.210882e-52 | -8.615850e-47 |
Msa0140130 | Msa0230870 | 0.836551 | 8.758183e-57 | -8.615850e-47 |
Msa0140130 | Msa0232760 | 0.807882 | 4.068708e-50 | -8.615850e-47 |
Msa0140130 | Msa0270340 | 0.828405 | 9.154984e-55 | -8.615850e-47 |
Msa0140130 | Msa0284800 | 0.847436 | 1.158104e-59 | -8.615850e-47 |
Msa0140130 | Msa0307670 | 0.855951 | 4.467477e-62 | -8.615850e-47 |
Msa0140130 | Msa0330520 | 0.843030 | 1.799968e-58 | -8.615850e-47 |
Msa0140130 | Msa0347530 | 0.823284 | 1.504888e-53 | -8.615850e-47 |
Msa0140130 | Msa0367520 | 0.801187 | 1.013708e-48 | -8.615850e-47 |
Msa0140130 | Msa0367690 | 0.975520 | 4.196052e-140 | -8.615850e-47 |
Msa0140130 | Msa0368860 | 0.803850 | 2.863712e-49 | -8.615850e-47 |
Msa0140130 | Msa0380670 | 0.841669 | 4.131170e-58 | -8.615850e-47 |
Msa0140130 | Msa0382740 | 0.807257 | 5.522818e-50 | -8.615850e-47 |
Msa0140130 | Msa0382770 | 0.813068 | 3.086391e-51 | -8.615850e-47 |
Msa0140130 | Msa0415450 | 0.997825 | 5.429058e-250 | -8.615850e-47 |
Msa0140130 | Msa0416160 | 0.801908 | 7.209813e-49 | -8.615850e-47 |
Msa0140130 | Msa0430300 | 0.817598 | 3.034810e-52 | -8.615850e-47 |
Msa0140130 | Msa0430480 | 0.832092 | 1.151301e-55 | -8.615850e-47 |
Msa0140130 | Msa0432690 | 0.802435 | 5.617319e-49 | -8.615850e-47 |
Msa0140130 | Msa0436910 | 0.812874 | 3.404222e-51 | -8.615850e-47 |
Msa0140130 | Msa0447750 | 0.813579 | 2.383251e-51 | -8.615850e-47 |
Msa0140130 | Msa0460070 | 0.994932 | 1.750993e-211 | -8.615850e-47 |
Msa0140130 | Msa0466520 | 0.815033 | 1.137348e-51 | -8.615850e-47 |
Msa0140130 | Msa0517250 | 0.802517 | 5.403274e-49 | -8.615850e-47 |
Msa0140130 | Msa0519750 | 0.808457 | 3.068125e-50 | -8.615850e-47 |
Msa0140130 | Msa0521320 | 0.835619 | 1.509717e-56 | -8.615850e-47 |
Msa0140130 | Msa0524800 | 0.802832 | 4.652371e-49 | -8.615850e-47 |
Msa0140130 | Msa0525000 | 0.810916 | 9.086062e-51 | -8.615850e-47 |
Msa0140130 | Msa0529030 | 0.808397 | 3.160269e-50 | -8.615850e-47 |
Msa0140130 | Msa0531960 | 0.803532 | 3.332275e-49 | -8.615850e-47 |
Msa0140130 | Msa0541300 | 0.857741 | 1.327918e-62 | -8.615850e-47 |
Msa0140130 | Msa0541310 | 0.860312 | 2.254458e-63 | -8.615850e-47 |
Msa0140130 | Msa0545920 | 0.806348 | 8.591427e-50 | -8.615850e-47 |
Msa0140130 | Msa0548470 | 0.810903 | 9.143612e-51 | -8.615850e-47 |
Msa0140130 | Msa0562350 | 0.803711 | 3.059243e-49 | -8.615850e-47 |
Msa0140130 | Msa0567170 | 0.806153 | 9.444529e-50 | -8.615850e-47 |
Msa0140130 | Msa0570010 | 0.828610 | 8.170981e-55 | -8.615850e-47 |
Msa0140130 | Msa0585020 | 0.847743 | 9.533034e-60 | -8.615850e-47 |
Msa0140130 | Msa0590200 | 0.813556 | 2.410917e-51 | -8.615850e-47 |
Msa0140130 | Msa0597270 | 0.841278 | 5.234939e-58 | -8.615850e-47 |
Msa0140130 | Msa0601720 | 0.805049 | 1.610555e-49 | -8.615850e-47 |
Msa0140130 | Msa0606100 | 0.801134 | 1.038875e-48 | -8.615850e-47 |
Msa0140130 | Msa0607800 | 0.802811 | 4.698478e-49 | -8.615850e-47 |
Msa0140130 | Msa0612520 | 0.802044 | 6.763104e-49 | -8.615850e-47 |
Msa0140130 | Msa0616210 | 0.804228 | 2.388893e-49 | -8.615850e-47 |
Msa0140130 | Msa0619710 | 0.825498 | 4.535698e-54 | -8.615850e-47 |
Msa0140130 | Msa0621710 | 0.813457 | 2.535398e-51 | -8.615850e-47 |
Msa0140130 | Msa0641990 | 0.812220 | 4.731142e-51 | -8.615850e-47 |
Msa0140130 | Msa0644410 | 0.803734 | 3.025805e-49 | -8.615850e-47 |
Msa0140130 | Msa0655700 | 0.808920 | 2.442974e-50 | -8.615850e-47 |
Msa0140130 | Msa0657700 | 0.809025 | 2.319624e-50 | -8.615850e-47 |
Msa0140130 | Msa0666700 | 0.813970 | 1.954413e-51 | -8.615850e-47 |
Msa0140130 | Msa0668900 | 0.818848 | 1.582126e-52 | -8.615850e-47 |
Msa0140130 | Msa0675330 | 0.847939 | 8.415853e-60 | -8.615850e-47 |
Msa0140130 | Msa0675350 | 0.811719 | 6.083164e-51 | -8.615850e-47 |
Msa0140130 | Msa0681050 | 0.805413 | 1.351319e-49 | -8.615850e-47 |
Msa0140130 | Msa0687090 | 0.825486 | 4.567237e-54 | -8.615850e-47 |
Msa0140130 | Msa0699540 | 0.806387 | 8.433815e-50 | -8.615850e-47 |
Msa0140130 | Msa0702810 | 0.804529 | 2.067979e-49 | -8.615850e-47 |
Msa0140130 | Msa0706150 | 0.820246 | 7.592584e-53 | -8.615850e-47 |
Msa0140130 | Msa0720410 | 0.833971 | 3.925438e-56 | -8.615850e-47 |
Msa0140130 | Msa0728780 | 0.821464 | 3.981229e-53 | -8.615850e-47 |
Msa0140130 | Msa0734250 | 0.804152 | 2.477340e-49 | -8.615850e-47 |
Msa0140130 | Msa0735780 | 0.802772 | 4.787290e-49 | -8.615850e-47 |
Msa0140130 | Msa0743440 | 0.818261 | 2.149450e-52 | -8.615850e-47 |
Msa0140130 | Msa0745720 | 0.803573 | 3.269012e-49 | -8.615850e-47 |
Msa0140130 | Msa0756820 | 0.810378 | 1.187284e-50 | -8.615850e-47 |
Msa0140130 | Msa0760970 | 0.850359 | 1.786565e-60 | -8.615850e-47 |
Msa0140130 | Msa0773630 | 0.827966 | 1.168435e-54 | -8.615850e-47 |
Msa0140130 | Msa0792370 | 0.859761 | 3.307720e-63 | -8.615850e-47 |
Msa0140130 | Msa0803250 | 0.817057 | 4.017885e-52 | -8.615850e-47 |
Msa0140130 | Msa0805680 | 0.807266 | 5.496497e-50 | -8.615850e-47 |
Msa0140130 | Msa0811020 | 0.801508 | 8.709812e-49 | -8.615850e-47 |
Msa0140130 | Msa0828970 | 0.804191 | 2.431727e-49 | -8.615850e-47 |
Msa0140130 | Msa0841590 | 0.850447 | 1.688330e-60 | -8.615850e-47 |
Msa0140130 | Msa0863620 | 0.808077 | 3.696981e-50 | -8.615850e-47 |
Msa0140130 | Msa0864940 | 0.809977 | 1.448950e-50 | -8.615850e-47 |
Msa0140130 | Msa0867110 | 0.803523 | 3.346590e-49 | -8.615850e-47 |
Msa0140130 | Msa0879920 | 0.801743 | 7.797543e-49 | -8.615850e-47 |
Msa0140130 | Msa0931590 | 0.816300 | 5.937542e-52 | -8.615850e-47 |
Msa0140130 | Msa0935740 | 0.830349 | 3.087481e-55 | -8.615850e-47 |
Msa0140130 | Msa0972740 | 0.816353 | 5.777550e-52 | -8.615850e-47 |
Msa0140130 | Msa1021590 | 0.804609 | 1.989455e-49 | -8.615850e-47 |
Msa0140130 | Msa1029530 | 0.803941 | 2.740857e-49 | -8.615850e-47 |
Msa0140130 | Msa1059020 | 0.812731 | 3.657430e-51 | -8.615850e-47 |
Msa0140130 | Msa1076020 | 0.804228 | 2.388828e-49 | -8.615850e-47 |
Msa0140130 | Msa1078820 | 0.827801 | 1.280157e-54 | -8.615850e-47 |
Msa0140130 | Msa1078880 | 0.816755 | 4.695472e-52 | -8.615850e-47 |
Msa0140130 | Msa1078970 | 0.823653 | 1.233955e-53 | -8.615850e-47 |
Msa0140130 | Msa1082380 | 0.806935 | 6.460738e-50 | -8.615850e-47 |
Msa0140130 | Msa1105640 | 0.800268 | 1.560683e-48 | -8.615850e-47 |
Msa0140130 | Msa1116660 | 0.818055 | 2.393041e-52 | -8.615850e-47 |
Msa0140130 | Msa1116740 | 0.814460 | 1.523612e-51 | -8.615850e-47 |
Msa0140130 | Msa1123200 | 0.834036 | 3.779551e-56 | -8.615850e-47 |
Msa0140130 | Msa1123210 | 0.813265 | 2.793161e-51 | -8.615850e-47 |
Msa0140130 | Msa1123970 | 0.832414 | 9.582449e-56 | -8.615850e-47 |
Msa0140130 | Msa1125990 | 0.800734 | 1.254370e-48 | -8.615850e-47 |
Msa0140130 | Msa1127280 | 0.803039 | 4.217047e-49 | -8.615850e-47 |
Msa0140130 | Msa1132530 | 0.809188 | 2.140867e-50 | -8.615850e-47 |
Msa0140130 | Msa1154550 | 0.804600 | 1.998806e-49 | -8.615850e-47 |
Msa0140130 | Msa1165480 | 0.808338 | 3.252786e-50 | -8.615850e-47 |
Msa0140130 | Msa1166190 | 0.806002 | 1.016021e-49 | -8.615850e-47 |
Msa0140130 | Msa1166290 | 0.803316 | 3.694519e-49 | -8.615850e-47 |
Msa0140130 | Msa1169190 | 0.814350 | 1.611273e-51 | -8.615850e-47 |
Msa0140130 | Msa1169650 | 0.831708 | 1.431815e-55 | -8.615850e-47 |
Msa0140130 | Msa1192550 | 0.809340 | 1.986396e-50 | -8.615850e-47 |
Msa0140130 | Msa1192560 | 0.845141 | 4.885123e-59 | -8.615850e-47 |
Msa0140130 | Msa1192590 | 0.844843 | 5.879491e-59 | -8.615850e-47 |
Msa0140130 | Msa1213830 | 0.821781 | 3.363959e-53 | -8.615850e-47 |
Msa0140130 | Msa1214350 | 0.822928 | 1.821597e-53 | -8.615850e-47 |
Msa0140130 | Msa1218820 | 0.807668 | 4.516996e-50 | -8.615850e-47 |
Msa0140130 | Msa1221120 | 0.824050 | 9.956524e-54 | -8.615850e-47 |
Msa0140130 | Msa1228580 | 0.823728 | 1.184968e-53 | -8.615850e-47 |
Msa0140130 | Msa1252790 | 0.835563 | 1.560401e-56 | -8.615850e-47 |
Msa0140130 | Msa1254540 | 0.802027 | 6.815023e-49 | -8.615850e-47 |
Msa0140130 | Msa1261050 | 0.806127 | 9.565807e-50 | -8.615850e-47 |
Msa0140130 | Msa1263740 | 0.804815 | 1.801966e-49 | -8.615850e-47 |
Msa0140130 | Msa1263780 | 0.821314 | 4.312858e-53 | -8.615850e-47 |
Msa0140130 | Msa1265450 | 0.827267 | 1.719530e-54 | -8.615850e-47 |
Msa0140130 | Msa1279120 | 0.832827 | 7.568282e-56 | -8.615850e-47 |
Msa0140130 | Msa1300460 | 0.828699 | 7.775740e-55 | -8.615850e-47 |
Msa0140130 | Msa1303560 | 0.802462 | 5.547240e-49 | -8.615850e-47 |
Msa0140130 | Msa1303650 | 0.813288 | 2.760702e-51 | -8.615850e-47 |
Msa0140130 | Msa1308850 | 0.801853 | 7.400561e-49 | -8.615850e-47 |
Msa0140130 | Msa1332950 | 0.825954 | 3.537285e-54 | -8.615850e-47 |
Msa0140130 | Msa1342810 | 0.816337 | 5.824107e-52 | -8.615850e-47 |
Msa0140130 | Msa1362130 | 0.801240 | 9.884627e-49 | -8.615850e-47 |
Msa0140130 | Msa1364410 | 0.811497 | 6.797240e-51 | -8.615850e-47 |
Msa0140130 | Msa1366150 | 0.802667 | 5.031236e-49 | -8.615850e-47 |
Msa0140130 | Msa1372040 | 0.821686 | 3.538885e-53 | -8.615850e-47 |
Msa0140130 | Msa1382300 | 0.823145 | 1.621772e-53 | -8.615850e-47 |
Msa0140130 | Msa1384150 | 0.809351 | 1.975040e-50 | -8.615850e-47 |
Msa0140130 | Msa1397270 | 0.808568 | 2.905405e-50 | -8.615850e-47 |
Msa0140130 | Msa1400710 | 0.810445 | 1.148401e-50 | -8.615850e-47 |
Msa0140130 | Msa1405460 | 0.810336 | 1.212867e-50 | -8.615850e-47 |
Msa0140130 | Msa1406720 | 0.808717 | 2.699691e-50 | -8.615850e-47 |
Msa0140130 | Msa1409410 | 0.825042 | 5.814421e-54 | -8.615850e-47 |
Msa0140130 | Msa1417370 | 0.811981 | 5.334848e-51 | -8.615850e-47 |
Msa0140130 | Msa1427100 | 0.815121 | 1.087203e-51 | -8.615850e-47 |
Msa0140130 | Msa1428000 | 0.817750 | 2.804126e-52 | -8.615850e-47 |
Msa0140130 | Msa1435960 | 0.861821 | 7.833515e-64 | -8.615850e-47 |
Msa0140130 | Msa1440630 | 0.837390 | 5.348326e-57 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0140130 | MtrunA17_Chr3g0109391 | 98.471 | 850 | 12 | 1 | 1 | 850 | 1 | 849 | 0.0 | 1732 |
Msa0140130 | MtrunA17_Chr5g0433301 | 82.884 | 853 | 131 | 11 | 1 | 850 | 1 | 841 | 0.0 | 1398 |
Msa0140130 | MtrunA17_Chr8g0376771 | 78.947 | 456 | 85 | 6 | 1 | 453 | 1 | 448 | 0.0 | 731 |
Msa0140130 | MtrunA17_Chr4g0070181 | 65.217 | 414 | 134 | 8 | 16 | 424 | 13 | 421 | 3.59e-171 | 525 |
Msa0140130 | MtrunA17_Chr4g0070181 | 52.294 | 109 | 52 | 0 | 704 | 812 | 974 | 1082 | 1.60e-29 | 126 |
Msa0140130 | MtrunA17_Chr1g0156321 | 68.120 | 367 | 113 | 3 | 18 | 383 | 35 | 398 | 2.14e-168 | 510 |
Msa0140130 | MtrunA17_Chr1g0156321 | 46.825 | 126 | 64 | 2 | 706 | 829 | 735 | 859 | 5.02e-26 | 115 |
Msa0140130 | MtrunA17_Chr2g0301251 | 64.251 | 414 | 137 | 7 | 16 | 424 | 13 | 420 | 1.52e-166 | 513 |
Msa0140130 | MtrunA17_Chr2g0301251 | 61.364 | 88 | 34 | 0 | 725 | 812 | 987 | 1074 | 9.14e-30 | 127 |
Msa0140130 | MtrunA17_Chr8g0389081 | 52.212 | 565 | 223 | 13 | 9 | 553 | 21 | 558 | 1.41e-156 | 486 |
Msa0140130 | MtrunA17_Chr8g0389081 | 64.773 | 88 | 31 | 0 | 725 | 812 | 986 | 1073 | 4.77e-31 | 131 |
Msa0140130 | MtrunA17_Chr2g0276781 | 54.545 | 352 | 155 | 4 | 16 | 366 | 13 | 360 | 8.76e-126 | 393 |
Msa0140130 | MtrunA17_Chr2g0276781 | 39.080 | 87 | 51 | 2 | 727 | 812 | 550 | 635 | 1.27e-13 | 74.7 |
Msa0140130 | MtrunA17_Chr8g0385791 | 46.154 | 442 | 225 | 6 | 9 | 448 | 42 | 472 | 4.75e-123 | 391 |
Msa0140130 | MtrunA17_Chr8g0385791 | 41.441 | 111 | 61 | 4 | 704 | 812 | 690 | 798 | 1.10e-16 | 85.1 |
Msa0140130 | MtrunA17_Chr8g0346711 | 48.711 | 388 | 183 | 6 | 9 | 385 | 12 | 394 | 8.42e-118 | 372 |
Msa0140130 | MtrunA17_Chr8g0346711 | 43.820 | 89 | 47 | 2 | 725 | 812 | 559 | 645 | 1.64e-14 | 77.8 |
Msa0140130 | MtrunA17_Chr2g0326281 | 50.959 | 365 | 152 | 7 | 26 | 366 | 56 | 417 | 1.16e-111 | 360 |
Msa0140130 | MtrunA17_Chr2g0326281 | 41.525 | 118 | 60 | 3 | 696 | 812 | 674 | 783 | 8.16e-20 | 95.1 |
Msa0140130 | MtrunA17_Chr4g0029671 | 50.678 | 369 | 160 | 6 | 26 | 379 | 54 | 415 | 1.64e-111 | 359 |
Msa0140130 | MtrunA17_Chr4g0029671 | 46.512 | 86 | 44 | 2 | 728 | 812 | 667 | 751 | 1.03e-17 | 88.2 |
Msa0140130 | MtrunA17_Chr4g0009751 | 48.819 | 381 | 187 | 6 | 22 | 400 | 15 | 389 | 1.29e-110 | 352 |
Msa0140130 | MtrunA17_Chr7g0239061 | 45.154 | 423 | 215 | 10 | 16 | 429 | 4 | 418 | 4.72e-110 | 352 |
Msa0140130 | MtrunA17_Chr7g0239061 | 39.362 | 94 | 54 | 2 | 720 | 812 | 566 | 657 | 6.23e-14 | 75.9 |
Msa0140130 | MtrunA17_Chr2g0282961 | 48.187 | 386 | 162 | 7 | 22 | 389 | 51 | 416 | 8.97e-108 | 344 |
Msa0140130 | MtrunA17_Chr4g0046371 | 47.606 | 376 | 171 | 6 | 17 | 378 | 31 | 394 | 2.66e-107 | 345 |
Msa0140130 | MtrunA17_Chr2g0326761 | 40.394 | 406 | 190 | 9 | 20 | 382 | 5 | 401 | 2.17e-83 | 281 |
Msa0140130 | MtrunA17_Chr1g0199681 | 40.052 | 387 | 185 | 10 | 20 | 368 | 88 | 465 | 2.44e-80 | 273 |
Msa0140130 | MtrunA17_Chr4g0028971 | 38.186 | 419 | 201 | 9 | 19 | 389 | 5 | 413 | 3.69e-78 | 267 |
Msa0140130 | MtrunA17_Chr1g0181211 | 35.204 | 392 | 202 | 5 | 20 | 366 | 21 | 405 | 2.79e-72 | 251 |
Msa0140130 | MtrunA17_Chr3g0115271 | 36.092 | 435 | 231 | 8 | 23 | 420 | 16 | 440 | 1.97e-67 | 235 |
Msa0140130 | MtrunA17_Chr7g0264171 | 34.750 | 400 | 200 | 9 | 21 | 369 | 26 | 415 | 3.93e-64 | 226 |
Msa0140130 | MtrunA17_Chr5g0424931 | 33.023 | 430 | 238 | 11 | 23 | 420 | 16 | 427 | 8.97e-59 | 209 |
Msa0140130 | MtrunA17_Chr7g0264161 | 37.097 | 310 | 182 | 6 | 35 | 340 | 1 | 301 | 2.05e-58 | 201 |
Msa0140130 | MtrunA17_Chr5g0417281 | 31.842 | 380 | 230 | 9 | 23 | 394 | 8 | 366 | 7.14e-56 | 201 |
Msa0140130 | MtrunA17_Chr5g0436761 | 33.884 | 363 | 214 | 9 | 19 | 373 | 5 | 349 | 2.93e-55 | 197 |
Msa0140130 | MtrunA17_Chr8g0356211 | 40.664 | 241 | 128 | 6 | 138 | 369 | 2 | 236 | 2.90e-53 | 187 |
Msa0140130 | MtrunA17_Chr1g0178011 | 32.432 | 370 | 218 | 13 | 21 | 379 | 7 | 355 | 8.68e-51 | 185 |
Msa0140130 | MtrunA17_Chr2g0285461 | 47.059 | 221 | 94 | 5 | 652 | 850 | 689 | 908 | 8.89e-46 | 177 |
Msa0140130 | MtrunA17_Chr2g0277461 | 31.728 | 353 | 219 | 9 | 26 | 373 | 13 | 348 | 2.01e-44 | 167 |
Msa0140130 | MtrunA17_Chr2g0289221 | 34.146 | 328 | 177 | 12 | 26 | 340 | 20 | 321 | 4.44e-44 | 163 |
Msa0140130 | MtrunA17_Chr5g0419811 | 61.940 | 134 | 30 | 2 | 586 | 698 | 27 | 160 | 1.05e-42 | 153 |
Msa0140130 | MtrunA17_Chr5g0417211 | 31.548 | 336 | 182 | 10 | 23 | 340 | 9 | 314 | 8.08e-42 | 158 |
Msa0140130 | MtrunA17_Chr5g0424741 | 27.642 | 369 | 229 | 7 | 23 | 360 | 9 | 370 | 2.12e-37 | 147 |
Msa0140130 | MtrunA17_Chr5g0424801 | 29.155 | 343 | 222 | 9 | 23 | 360 | 9 | 335 | 5.06e-34 | 134 |
Msa0140130 | MtrunA17_Chr2g0277531 | 29.712 | 313 | 186 | 11 | 23 | 323 | 17 | 307 | 6.26e-34 | 132 |
Msa0140130 | MtrunA17_Chr5g0425661 | 35.437 | 206 | 121 | 3 | 25 | 226 | 36 | 233 | 1.15e-33 | 129 |
Msa0140130 | MtrunA17_Chr5g0425261 | 29.155 | 343 | 222 | 9 | 23 | 360 | 9 | 335 | 7.35e-33 | 131 |
Msa0140130 | MtrunA17_Chr1g0156301 | 35.606 | 132 | 60 | 2 | 707 | 829 | 151 | 266 | 1.17e-16 | 80.9 |
Msa0140130 | MtrunA17_Chr5g0424791 | 34.211 | 152 | 85 | 6 | 78 | 226 | 12 | 151 | 3.84e-15 | 73.6 |
Msa0140130 | MtrunA17_Chr1g0156311 | 41.593 | 113 | 33 | 2 | 248 | 360 | 1 | 80 | 3.36e-13 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0140130 | AT5G37020.1 | 69.581 | 835 | 210 | 15 | 1 | 825 | 1 | 801 | 0.0 | 1090 |
Msa0140130 | AT5G37020.2 | 69.451 | 802 | 206 | 14 | 1 | 792 | 1 | 773 | 0.0 | 1045 |
Msa0140130 | AT5G37020.3 | 67.255 | 736 | 201 | 14 | 100 | 825 | 1 | 706 | 0.0 | 907 |
Msa0140130 | AT1G30330.1 | 76.398 | 483 | 97 | 5 | 1 | 476 | 1 | 473 | 0.0 | 741 |
Msa0140130 | AT1G30330.1 | 53.646 | 192 | 76 | 4 | 640 | 819 | 699 | 889 | 8.82e-52 | 196 |
Msa0140130 | AT1G30330.3 | 76.398 | 483 | 99 | 5 | 1 | 476 | 1 | 475 | 0.0 | 741 |
Msa0140130 | AT1G30330.3 | 53.646 | 192 | 76 | 4 | 640 | 819 | 701 | 891 | 8.21e-52 | 196 |
Msa0140130 | AT1G30330.2 | 76.398 | 483 | 99 | 5 | 1 | 476 | 1 | 475 | 0.0 | 741 |
Msa0140130 | AT1G30330.2 | 53.646 | 192 | 76 | 4 | 640 | 819 | 701 | 891 | 8.21e-52 | 196 |
Msa0140130 | AT1G19850.1 | 42.679 | 881 | 390 | 27 | 17 | 819 | 45 | 888 | 0.0 | 579 |
Msa0140130 | AT1G19850.2 | 42.679 | 881 | 390 | 27 | 17 | 819 | 34 | 877 | 0.0 | 578 |
Msa0140130 | AT1G19220.1 | 61.098 | 437 | 160 | 8 | 1 | 434 | 1 | 430 | 7.23e-167 | 513 |
Msa0140130 | AT1G19220.1 | 61.458 | 96 | 34 | 1 | 725 | 817 | 959 | 1054 | 8.14e-30 | 127 |
Msa0140130 | AT5G20730.2 | 62.136 | 412 | 145 | 7 | 18 | 424 | 16 | 421 | 8.66e-161 | 499 |
Msa0140130 | AT5G20730.2 | 34.127 | 252 | 131 | 7 | 591 | 812 | 879 | 1125 | 2.11e-29 | 126 |
Msa0140130 | AT5G20730.3 | 61.985 | 413 | 145 | 8 | 18 | 424 | 16 | 422 | 5.46e-159 | 494 |
Msa0140130 | AT5G20730.3 | 34.127 | 252 | 131 | 7 | 591 | 812 | 880 | 1126 | 2.38e-29 | 126 |
Msa0140130 | AT5G20730.1 | 61.985 | 413 | 145 | 8 | 18 | 424 | 16 | 422 | 7.39e-159 | 494 |
Msa0140130 | AT5G20730.1 | 34.127 | 252 | 131 | 7 | 591 | 812 | 880 | 1126 | 2.18e-29 | 126 |
Msa0140130 | AT5G62000.2 | 48.815 | 422 | 200 | 5 | 3 | 417 | 31 | 443 | 2.76e-128 | 406 |
Msa0140130 | AT5G62000.2 | 41.935 | 93 | 52 | 2 | 721 | 812 | 730 | 821 | 1.63e-15 | 81.6 |
Msa0140130 | AT5G62000.5 | 48.815 | 422 | 200 | 5 | 3 | 417 | 31 | 443 | 2.76e-128 | 406 |
Msa0140130 | AT5G62000.5 | 41.935 | 93 | 52 | 2 | 721 | 812 | 730 | 821 | 1.63e-15 | 81.6 |
Msa0140130 | AT5G62000.3 | 48.815 | 422 | 200 | 5 | 3 | 417 | 31 | 443 | 2.76e-128 | 406 |
Msa0140130 | AT5G62000.3 | 41.935 | 93 | 52 | 2 | 721 | 812 | 730 | 821 | 1.63e-15 | 81.6 |
Msa0140130 | AT5G62000.1 | 48.815 | 422 | 200 | 5 | 3 | 417 | 31 | 443 | 2.76e-128 | 406 |
Msa0140130 | AT5G62000.1 | 41.935 | 93 | 52 | 2 | 721 | 812 | 730 | 821 | 1.63e-15 | 81.6 |
Msa0140130 | AT5G62000.4 | 48.815 | 422 | 200 | 5 | 3 | 417 | 31 | 443 | 6.33e-128 | 405 |
Msa0140130 | AT5G62000.4 | 38.462 | 117 | 67 | 3 | 721 | 833 | 730 | 845 | 1.33e-15 | 82.0 |
Msa0140130 | AT1G59750.4 | 52.231 | 381 | 169 | 5 | 16 | 390 | 12 | 385 | 1.32e-124 | 390 |
Msa0140130 | AT1G59750.4 | 41.379 | 87 | 49 | 2 | 727 | 812 | 540 | 625 | 8.10e-16 | 82.4 |
Msa0140130 | AT1G59750.1 | 52.231 | 381 | 169 | 5 | 16 | 390 | 12 | 385 | 1.49e-124 | 390 |
Msa0140130 | AT1G59750.1 | 41.379 | 87 | 49 | 2 | 727 | 812 | 545 | 630 | 8.09e-16 | 82.4 |
Msa0140130 | AT1G59750.3 | 52.231 | 381 | 169 | 5 | 16 | 390 | 12 | 385 | 1.49e-124 | 390 |
Msa0140130 | AT1G59750.3 | 41.379 | 87 | 49 | 2 | 727 | 812 | 545 | 630 | 8.09e-16 | 82.4 |
Msa0140130 | AT1G59750.2 | 52.231 | 381 | 169 | 5 | 16 | 390 | 12 | 385 | 1.57e-124 | 390 |
Msa0140130 | AT1G59750.2 | 41.379 | 87 | 49 | 2 | 727 | 812 | 542 | 627 | 8.19e-16 | 82.4 |
Msa0140130 | AT5G60450.2 | 52.618 | 382 | 163 | 7 | 18 | 389 | 33 | 406 | 9.19e-120 | 380 |
Msa0140130 | AT5G60450.2 | 44.318 | 88 | 47 | 2 | 728 | 814 | 645 | 731 | 9.55e-18 | 88.6 |
Msa0140130 | AT5G60450.1 | 53.050 | 377 | 159 | 7 | 23 | 389 | 62 | 430 | 3.50e-119 | 380 |
Msa0140130 | AT5G60450.1 | 44.318 | 88 | 47 | 2 | 728 | 814 | 669 | 755 | 1.03e-17 | 88.6 |
Msa0140130 | AT3G61830.1 | 53.890 | 347 | 152 | 7 | 23 | 367 | 22 | 362 | 7.19e-118 | 370 |
Msa0140130 | AT3G61830.1 | 41.772 | 79 | 44 | 1 | 734 | 812 | 500 | 576 | 5.14e-12 | 70.1 |
Msa0140130 | AT2G46530.1 | 51.966 | 356 | 162 | 7 | 17 | 370 | 12 | 360 | 2.62e-115 | 364 |
Msa0140130 | AT2G46530.1 | 34.127 | 126 | 78 | 4 | 693 | 817 | 461 | 582 | 5.13e-12 | 70.1 |
Msa0140130 | AT2G46530.3 | 51.966 | 356 | 162 | 7 | 17 | 370 | 33 | 381 | 6.47e-115 | 363 |
Msa0140130 | AT2G46530.3 | 34.127 | 126 | 78 | 4 | 693 | 817 | 482 | 603 | 6.39e-12 | 69.7 |
Msa0140130 | AT2G33860.1 | 49.582 | 359 | 151 | 7 | 16 | 361 | 48 | 389 | 2.36e-109 | 348 |
Msa0140130 | AT4G23980.1 | 49.215 | 382 | 170 | 9 | 17 | 389 | 5 | 371 | 2.44e-106 | 342 |
Msa0140130 | AT4G23980.1 | 42.308 | 78 | 43 | 1 | 735 | 812 | 535 | 610 | 2.41e-13 | 74.3 |
Msa0140130 | AT4G23980.2 | 49.731 | 372 | 163 | 9 | 17 | 379 | 5 | 361 | 1.15e-105 | 340 |
Msa0140130 | AT4G23980.2 | 42.308 | 78 | 43 | 1 | 735 | 812 | 533 | 608 | 2.30e-13 | 74.3 |
Msa0140130 | AT3G61830.2 | 52.848 | 316 | 141 | 7 | 54 | 367 | 2 | 311 | 1.55e-101 | 326 |
Msa0140130 | AT3G61830.2 | 41.772 | 79 | 44 | 1 | 734 | 812 | 449 | 525 | 4.21e-12 | 70.1 |
Msa0140130 | AT1G34410.1 | 42.440 | 377 | 195 | 7 | 18 | 386 | 19 | 381 | 1.36e-90 | 299 |
Msa0140130 | AT1G35540.1 | 42.735 | 351 | 182 | 6 | 18 | 363 | 19 | 355 | 4.91e-88 | 292 |
Msa0140130 | AT1G35240.1 | 42.077 | 366 | 193 | 6 | 18 | 378 | 19 | 370 | 6.65e-88 | 291 |
Msa0140130 | AT1G34310.1 | 42.623 | 366 | 191 | 6 | 18 | 378 | 19 | 370 | 7.80e-88 | 291 |
Msa0140130 | AT1G35520.1 | 41.867 | 375 | 196 | 7 | 20 | 386 | 21 | 381 | 8.36e-86 | 285 |
Msa0140130 | AT2G33860.2 | 56.897 | 232 | 99 | 1 | 130 | 361 | 2 | 232 | 4.20e-84 | 276 |
Msa0140130 | AT1G34170.1 | 42.775 | 346 | 185 | 7 | 20 | 362 | 19 | 354 | 1.68e-83 | 276 |
Msa0140130 | AT1G34390.1 | 41.645 | 377 | 196 | 8 | 18 | 386 | 19 | 379 | 2.89e-81 | 273 |
Msa0140130 | AT2G46530.2 | 52.610 | 249 | 114 | 3 | 122 | 370 | 29 | 273 | 2.92e-81 | 271 |
Msa0140130 | AT2G46530.2 | 34.127 | 126 | 78 | 4 | 693 | 817 | 374 | 495 | 3.13e-12 | 70.5 |
Msa0140130 | AT4G30080.1 | 39.344 | 427 | 185 | 15 | 17 | 389 | 10 | 416 | 4.88e-80 | 272 |
Msa0140130 | AT2G28350.2 | 38.889 | 396 | 183 | 9 | 19 | 366 | 3 | 387 | 7.38e-79 | 269 |
Msa0140130 | AT2G28350.1 | 38.889 | 396 | 183 | 9 | 19 | 366 | 3 | 387 | 1.10e-78 | 269 |
Msa0140130 | AT1G34170.2 | 39.306 | 346 | 171 | 6 | 20 | 362 | 19 | 328 | 4.85e-73 | 248 |
Msa0140130 | AT1G34170.3 | 39.306 | 346 | 171 | 6 | 20 | 362 | 19 | 328 | 2.45e-72 | 248 |
Msa0140130 | AT1G77850.1 | 33.333 | 405 | 224 | 9 | 23 | 392 | 16 | 409 | 1.13e-55 | 202 |
Msa0140130 | AT1G77850.2 | 33.333 | 405 | 224 | 9 | 23 | 392 | 16 | 409 | 1.75e-55 | 202 |
Msa0140130 | AT1G43950.1 | 42.396 | 217 | 107 | 5 | 18 | 229 | 19 | 222 | 8.31e-48 | 169 |
Find 274 sgRNAs with CRISPR-Local
Find 578 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAACTGGGTCATGCTGTTTC+TGG | 0.051747 | 1_3:-74285650 | Msa0140130:five_prime_UTR |
TGAAGTTAATTGAAAGTTTA+TGG | 0.154138 | 1_3:-74285403 | Msa0140130:five_prime_UTR |
CACCCGAGAGAACATGATTT+TGG | 0.164979 | 1_3:+74279021 | None:intergenic |
GAATCTCACCACATTGTTTC+TGG | 0.168706 | 1_3:-74278295 | Msa0140130:CDS |
AGAGAGAAAGAGAGAATTAA+AGG | 0.203151 | 1_3:+74285844 | None:intergenic |
ACTGGTGCATCAACACAATT+AGG | 0.225076 | 1_3:-74278930 | Msa0140130:CDS |
TGAGAAGAATCAGCTTCTTT+TGG | 0.242248 | 1_3:-74282337 | Msa0140130:CDS |
AAAGTTTATGGCTTTAAGTT+AGG | 0.246128 | 1_3:-74285391 | Msa0140130:five_prime_UTR |
TACATTTCTTCCTATGGAAT+TGG | 0.251116 | 1_3:-74284414 | Msa0140130:CDS |
TTATGTATGATAAGAAATTT+AGG | 0.258432 | 1_3:-74278085 | Msa0140130:three_prime_UTR |
ACTCAATAGTACTATAAATT+TGG | 0.259046 | 1_3:+74285355 | None:intergenic |
GACAGCCACGGGTGTCATTA+TGG | 0.271992 | 1_3:-74280779 | Msa0140130:CDS |
TACATTGGGAATGTTGTTAA+AGG | 0.279523 | 1_3:+74280747 | None:intergenic |
TTTCTGTTGGTATGCGCTTC+AGG | 0.283489 | 1_3:-74282026 | Msa0140130:CDS |
GGCTCAGGACAAAGGCTTAA+TGG | 0.289324 | 1_3:-74278325 | Msa0140130:CDS |
ATGTCACATGCACAATATTC+TGG | 0.295246 | 1_3:-74279086 | Msa0140130:CDS |
ATGTTTGAATCCAGAAAATC+TGG | 0.318518 | 1_3:+74279296 | None:intergenic |
GAAAGAGAAAGAAGATATAA+AGG | 0.319808 | 1_3:-74285324 | Msa0140130:five_prime_UTR |
AACTGGGTCATGCTGTTTCT+GGG | 0.320324 | 1_3:-74285649 | Msa0140130:five_prime_UTR |
GTTGTTGAAGCAGTGTAATT+CGG | 0.326136 | 1_3:+74278957 | None:intergenic |
CCTTTACAAATGTTGGGTTC+TGG | 0.330041 | 1_3:+74278820 | None:intergenic |
GAAAGAAGATATAAAGGAAA+AGG | 0.338790 | 1_3:-74285318 | Msa0140130:five_prime_UTR |
GGTGGCAAACTAGGGTAATT+TGG | 0.343296 | 1_3:+74284754 | None:intergenic |
GAGGAGTTGGGTCAAATGTT+TGG | 0.355446 | 1_3:-74278651 | Msa0140130:CDS |
TACCCATGTCCAGCTTGGTC+GGG | 0.356588 | 1_3:-74285905 | None:intergenic |
CAATCATGGACTCCAAAGTA+TGG | 0.357970 | 1_3:-74279140 | Msa0140130:CDS |
AATCATACCTTTACAAATGT+TGG | 0.360748 | 1_3:+74278813 | None:intergenic |
AACATCAGGGTTGGGTCAGC+AGG | 0.365210 | 1_3:-74285268 | Msa0140130:CDS |
TTGTGGCTGCATCATATTAG+AGG | 0.366770 | 1_3:+74279496 | None:intergenic |
ACCTGCATATTTCCATACTT+TGG | 0.373068 | 1_3:+74279128 | None:intergenic |
ATTAGGGGAGTCTGGATTCC+AGG | 0.373216 | 1_3:-74278913 | Msa0140130:CDS |
TTGTTGAAGCAGTGTAATTC+GGG | 0.374824 | 1_3:+74278958 | None:intergenic |
TGGAACCTGAAGGTTACATT+TGG | 0.379289 | 1_3:+74278224 | None:intergenic |
GTTTCCTGATTGAAGGTAAT+GGG | 0.381131 | 1_3:+74279571 | None:intergenic |
GCTTGTACTTGTGTACTCTA+AGG | 0.382313 | 1_3:-74277982 | Msa0140130:three_prime_UTR |
TTGATGATGGTAGGAGGAGG+AGG | 0.385574 | 1_3:-74285071 | Msa0140130:intron |
TTCGGTGGCCGAATTCTCAT+TGG | 0.386961 | 1_3:-74281632 | Msa0140130:CDS |
ATCATACCTTTACAAATGTT+GGG | 0.387358 | 1_3:+74278814 | None:intergenic |
GAAGGATACATTTCTTCCTA+TGG | 0.388663 | 1_3:-74284420 | Msa0140130:CDS |
GGCGTTCACTTGACATCTCT+CGG | 0.389532 | 1_3:-74278698 | Msa0140130:CDS |
CTCAATTCCCTAAGCTTTCA+AGG | 0.390996 | 1_3:-74279755 | Msa0140130:CDS |
TCCATGTGTGCTGGTGTCAC+TGG | 0.393127 | 1_3:+74284343 | None:intergenic |
CATGTTGCTGTTGTTGAGCT+TGG | 0.394512 | 1_3:+74279405 | None:intergenic |
GGCAGCTTGTGTTCGTCGAC+CGG | 0.394739 | 1_3:-74278590 | Msa0140130:CDS |
AGGTACATGGGCACAATAAC+AGG | 0.395133 | 1_3:-74281675 | Msa0140130:CDS |
ACATTTCTTCCTATGGAATT+GGG | 0.395296 | 1_3:-74284413 | Msa0140130:CDS |
GTATTTGCCCATCGATTTCT+CGG | 0.396181 | 1_3:+74284776 | None:intergenic |
AAGAGATTGCCAGTTCCTTC+AGG | 0.401444 | 1_3:+74279221 | None:intergenic |
TCGTGCAGGTTAAGTCCAAC+TGG | 0.403486 | 1_3:-74285666 | Msa0140130:five_prime_UTR |
GATTCCCAAATGTAACCTTC+AGG | 0.405342 | 1_3:-74278229 | Msa0140130:three_prime_UTR |
GGGTCAAATGTTTGGAATTG+AGG | 0.410114 | 1_3:-74278643 | Msa0140130:CDS |
TGTTGAAAATTCACCATTTG+TGG | 0.412897 | 1_3:+74279602 | None:intergenic |
AAAGAAGATATAAAGGAAAA+GGG | 0.418467 | 1_3:-74285317 | Msa0140130:five_prime_UTR |
GATATGAAGCTTTCAACATC+AGG | 0.419913 | 1_3:-74285282 | Msa0140130:CDS |
TCGCTTTGCCCTGAAGGAAC+TGG | 0.421075 | 1_3:-74279230 | Msa0140130:CDS |
CCATCTTTATTATTTATGTC+AGG | 0.422403 | 1_3:-74278128 | Msa0140130:three_prime_UTR |
TGGATTGTTGTTGTCTCTGA+TGG | 0.422799 | 1_3:+74279345 | None:intergenic |
TATTACTTGGTTTCTGAAGA+AGG | 0.423272 | 1_3:+74279438 | None:intergenic |
TAGTTCGAGGGCTGCTTGCT+TGG | 0.423956 | 1_3:+74284386 | None:intergenic |
ACCAACTGAGGTGGCAAACT+AGG | 0.424599 | 1_3:+74284745 | None:intergenic |
TCGTGTGGTTTACTTCCCTC+AGG | 0.426327 | 1_3:-74284973 | Msa0140130:CDS |
TGATGATGGTAGGAGGAGGA+GGG | 0.428230 | 1_3:-74285070 | Msa0140130:intron |
GAGCTATGGCATGCATGTGC+GGG | 0.429113 | 1_3:-74285026 | Msa0140130:CDS |
CGGTCTCAATCGATAGTGAT+AGG | 0.431967 | 1_3:-74285763 | Msa0140130:five_prime_UTR |
TGTTTCCTGATTGAAGGTAA+TGG | 0.432025 | 1_3:+74279570 | None:intergenic |
TTCTCCTTGGCGACGATCCG+TGG | 0.432036 | 1_3:-74278554 | Msa0140130:CDS |
TCAACACAATTAGGGGAGTC+TGG | 0.433146 | 1_3:-74278921 | Msa0140130:CDS |
TCCCTAAGCTTTCAAGGTGC+TGG | 0.434039 | 1_3:-74279749 | Msa0140130:CDS |
AAGTTTATGGCTTTAAGTTA+GGG | 0.435522 | 1_3:-74285390 | Msa0140130:five_prime_UTR |
ACAGAGCGCCAATGAGAATT+CGG | 0.441458 | 1_3:+74281624 | None:intergenic |
ACCGGAAGATATTCAGAAGA+TGG | 0.441945 | 1_3:-74278377 | Msa0140130:CDS |
CAAGCCATGTTGGCAGCAGC+TGG | 0.445522 | 1_3:-74279659 | Msa0140130:CDS |
AATTATTGTTTCCTGATTGA+AGG | 0.445577 | 1_3:+74279564 | None:intergenic |
GTTTCCTGCTTCAGTTCCCT+CGG | 0.445848 | 1_3:-74279270 | Msa0140130:CDS |
TCGTGAGCTGCGAGAGGAGT+TGG | 0.445981 | 1_3:-74278664 | Msa0140130:CDS |
CCCTCGGGACAAAACATGCT+TGG | 0.447307 | 1_3:-74279254 | Msa0140130:CDS |
TGTCCCGAGGGAACTGAAGC+AGG | 0.448589 | 1_3:+74279266 | None:intergenic |
GGAACCTGAAGGTTACATTT+GGG | 0.449492 | 1_3:+74278225 | None:intergenic |
TGGAGTTCTTGATTATTACT+TGG | 0.451846 | 1_3:+74279425 | None:intergenic |
ATCGAGTCTCTGCTGCATCC+AGG | 0.452229 | 1_3:+74279718 | None:intergenic |
ACAGCCACGGGTGTCATTAT+GGG | 0.453297 | 1_3:-74280778 | Msa0140130:CDS |
CCTGGCACCTCATCTTTGCT+TGG | 0.453584 | 1_3:-74280684 | Msa0140130:intron |
TTTACAAATCGGGATCGGTT+GGG | 0.453914 | 1_3:-74278719 | Msa0140130:CDS |
CTTGGGTCGCTTTGCCCTGA+AGG | 0.454313 | 1_3:-74279236 | Msa0140130:CDS |
CCCTAGTTTGCCACCTCAGT+TGG | 0.454591 | 1_3:-74284746 | Msa0140130:CDS |
CGTGAGCTGCGAGAGGAGTT+GGG | 0.455026 | 1_3:-74278663 | Msa0140130:CDS |
CATTCCAGCTGCTGCCAACA+TGG | 0.457092 | 1_3:+74279655 | None:intergenic |
GATCATTCGTGAATAACGTT+TGG | 0.457590 | 1_3:-74278417 | Msa0140130:CDS |
CCCATCTTCTGAATATCTTC+CGG | 0.458005 | 1_3:+74278376 | None:intergenic |
GTTTACAAATCGGGATCGGT+TGG | 0.458017 | 1_3:-74278720 | Msa0140130:CDS |
AAAGAGAGAATTAAAGGAAG+AGG | 0.462263 | 1_3:+74285850 | None:intergenic |
TGCAGTTGGTAGGGACACTA+AGG | 0.462596 | 1_3:+74285001 | None:intergenic |
CATTACAGTTTGCGGTCGAC+TGG | 0.464099 | 1_3:+74282302 | None:intergenic |
GGTCAAATGTTTGGAATTGA+GGG | 0.464166 | 1_3:-74278642 | Msa0140130:CDS |
AATAACAGGCATAAGTGATC+TGG | 0.466043 | 1_3:-74281661 | Msa0140130:CDS |
TATTCAGAAGATGGGAGATC+AGG | 0.466213 | 1_3:-74278368 | Msa0140130:CDS |
TTGGTGAATGTGAATTGAAA+TGG | 0.466410 | 1_3:-74285428 | Msa0140130:five_prime_UTR |
GAGAATGATGTGCTTCTCCT+TGG | 0.467913 | 1_3:-74278567 | Msa0140130:CDS |
AATATGCAGGTCAATGCCTT+TGG | 0.468146 | 1_3:-74279116 | Msa0140130:CDS |
TGATCATTCCCGAGTAAAGT+TGG | 0.471692 | 1_3:+74279695 | None:intergenic |
AACAGTTACCACAACAATCA+TGG | 0.472142 | 1_3:-74279154 | Msa0140130:CDS |
TCTGAAGAAGGTGCTGAGAC+AGG | 0.472514 | 1_3:+74279450 | None:intergenic |
AAGGTGCTGGTATGTTGCCC+TGG | 0.473085 | 1_3:-74279736 | Msa0140130:CDS |
AAGCTTTCAACATCAGGGTT+GGG | 0.474639 | 1_3:-74285276 | Msa0140130:CDS |
GATGATGGCATTACAGTTTG+CGG | 0.474988 | 1_3:+74282294 | None:intergenic |
CTGGTGCATCAACACAATTA+GGG | 0.475544 | 1_3:-74278929 | Msa0140130:CDS |
TACCAGCACCTTGAAAGCTT+AGG | 0.478249 | 1_3:+74279747 | None:intergenic |
AAACGACACCTTCTTACAAC+AGG | 0.480570 | 1_3:-74282518 | Msa0140130:CDS |
CCCTCAGGGTCATAGTGAGC+AGG | 0.480735 | 1_3:-74284958 | Msa0140130:intron |
CCTCGGGACAAAACATGCTT+GGG | 0.481398 | 1_3:-74279253 | Msa0140130:CDS |
TGCCCAAAATCATGTTCTCT+CGG | 0.482478 | 1_3:-74279024 | Msa0140130:CDS |
TCCAATGTGCATACTATCAC+TGG | 0.484034 | 1_3:+74282263 | None:intergenic |
TTAGAAGACCCTCTTAGATC+AGG | 0.488946 | 1_3:-74278615 | Msa0140130:CDS |
AACCACCATACCGGAGTCAA+TGG | 0.492073 | 1_3:+74284535 | None:intergenic |
GAAGCTTTCAACATCAGGGT+TGG | 0.494409 | 1_3:-74285277 | Msa0140130:CDS |
CCAAGCAAAGATGAGGTGCC+AGG | 0.496339 | 1_3:+74280684 | None:intergenic |
CCTACCCATTACCTTCAATC+AGG | 0.501586 | 1_3:-74279575 | Msa0140130:CDS |
GGTGTCAATATCGATTCATC+TGG | 0.502455 | 1_3:-74279002 | Msa0140130:CDS |
AGAGATTGCCAGTTCCTTCA+GGG | 0.503136 | 1_3:+74279222 | None:intergenic |
CTGTAAAACACTTCCTCACT+CGG | 0.503328 | 1_3:-74285783 | Msa0140130:five_prime_UTR |
GTACCCATGTCCAGCTTGGT+CGG | 0.506990 | 1_3:-74285906 | None:intergenic |
ACCAGCACCTTGAAAGCTTA+GGG | 0.507030 | 1_3:+74279748 | None:intergenic |
AGACTCGATCCAACTTTACT+CGG | 0.507840 | 1_3:-74279704 | Msa0140130:CDS |
CTTGGAATGCCCAATTCCAT+AGG | 0.508703 | 1_3:+74284404 | None:intergenic |
CAGCTGCTGCCAACATGGCT+TGG | 0.509435 | 1_3:+74279660 | None:intergenic |
GGAAACAATGACGGATACAT+TGG | 0.511721 | 1_3:+74280732 | None:intergenic |
ACCCATGTCCAGCTTGGTCG+GGG | 0.512771 | 1_3:-74285904 | None:intergenic |
CAGCACAAGAACTAATTGCT+AGG | 0.513016 | 1_3:-74284176 | Msa0140130:CDS |
TACTGTACCCATGTCCAGCT+TGG | 0.513263 | 1_3:-74285910 | None:intergenic |
TTGAAACGTCCATGGCATCC+TGG | 0.514642 | 1_3:-74280702 | Msa0140130:CDS |
TCTCCTTGGCGACGATCCGT+GGG | 0.515507 | 1_3:-74278553 | Msa0140130:CDS |
GGGATCTCCATGATGTTGAA+TGG | 0.516288 | 1_3:-74284155 | Msa0140130:CDS |
GCCCAAAATCATGTTCTCTC+GGG | 0.516372 | 1_3:-74279023 | Msa0140130:CDS |
CTAGCAATTAGTTCTTGTGC+TGG | 0.516892 | 1_3:+74284177 | None:intergenic |
AAGAGAGAATTAAAGGAAGA+GGG | 0.520463 | 1_3:+74285851 | None:intergenic |
GTAAGTACTTGGGTTTGTTG+TGG | 0.520724 | 1_3:+74279479 | None:intergenic |
TTACTGTCTTCTACAATCCA+AGG | 0.520940 | 1_3:-74282197 | Msa0140130:intron |
AGCTGCCAGCCTGATCTAAG+AGG | 0.521748 | 1_3:+74278606 | None:intergenic |
GATGATGGTAGGAGGAGGAG+GGG | 0.521810 | 1_3:-74285069 | Msa0140130:intron |
GAACAACGTGTCACTCGTGC+AGG | 0.522088 | 1_3:-74285680 | Msa0140130:five_prime_UTR |
GTTGTAAGAAGGTGTCGTTT+TGG | 0.523090 | 1_3:+74282521 | None:intergenic |
GTGTAATTCGGGACAGTGGT+GGG | 0.525510 | 1_3:+74278969 | None:intergenic |
TCGAGTCTCTGCTGCATCCA+GGG | 0.526729 | 1_3:+74279719 | None:intergenic |
CCATGGACGTTTCAATCTGA+GGG | 0.526959 | 1_3:+74280710 | None:intergenic |
GCGGTAGAAATGCATGGACT+AGG | 0.528086 | 1_3:-74278346 | Msa0140130:CDS |
AGCAGCTGGAATGCAGAACA+TGG | 0.531369 | 1_3:-74279645 | Msa0140130:CDS |
GCATTGTGACATTATGAAGT+TGG | 0.532620 | 1_3:+74284719 | None:intergenic |
AATGTCTGAATTCTGAGCTA+TGG | 0.533163 | 1_3:-74285040 | Msa0140130:CDS |
TCCAAAGTATGGAAATATGC+AGG | 0.535455 | 1_3:-74279129 | Msa0140130:CDS |
GTATATCAAAATACTTTCAC+CGG | 0.536924 | 1_3:-74278395 | Msa0140130:CDS |
CCAACTGAGGTGGCAAACTA+GGG | 0.537055 | 1_3:+74284746 | None:intergenic |
TTCTCATTGGCGCTCTGTCA+AGG | 0.537284 | 1_3:-74281619 | Msa0140130:intron |
GCAGCTTGTGTTCGTCGACC+GGG | 0.539113 | 1_3:-74278589 | Msa0140130:CDS |
GCAATTAGTTCTTGTGCTGG+TGG | 0.539778 | 1_3:+74284180 | None:intergenic |
GACACCTTCTTACAACAGGC+TGG | 0.539846 | 1_3:-74282514 | Msa0140130:CDS |
TGCTCCAGCCTGTTGTAAGA+AGG | 0.539965 | 1_3:+74282510 | None:intergenic |
TGAGCTATGGCATGCATGTG+CGG | 0.540701 | 1_3:-74285027 | Msa0140130:CDS |
CCCTCAGATTGAAACGTCCA+TGG | 0.541348 | 1_3:-74280710 | Msa0140130:CDS |
GCCATGGACGTTTCAATCTG+AGG | 0.543357 | 1_3:+74280709 | None:intergenic |
TCTGGACAACCACCATCGAT+TGG | 0.543380 | 1_3:-74278277 | Msa0140130:CDS |
CCAGAACCCAACATTTGTAA+AGG | 0.543632 | 1_3:-74278820 | Msa0140130:intron |
TACCAACAGAAATACGTGTA+TGG | 0.544658 | 1_3:+74282037 | None:intergenic |
TAAGTGATCTGGATGCTGTT+CGG | 0.545538 | 1_3:-74281650 | Msa0140130:CDS |
CCTGACATAAATAATAAAGA+TGG | 0.547877 | 1_3:+74278128 | None:intergenic |
CCGGAAGATATTCAGAAGAT+GGG | 0.549827 | 1_3:-74278376 | Msa0140130:CDS |
GGACAAAGGCTTAATGGCAC+TGG | 0.551217 | 1_3:-74278319 | Msa0140130:CDS |
TACCATACACGTATTTCTGT+TGG | 0.551422 | 1_3:-74282039 | Msa0140130:CDS |
ATATCTCATGAGGCCACAAA+TGG | 0.555481 | 1_3:-74279615 | Msa0140130:CDS |
GATGAGGTGCCAGGATGCCA+TGG | 0.555703 | 1_3:+74280693 | None:intergenic |
TTTCCTGCTTCAGTTCCCTC+GGG | 0.556002 | 1_3:-74279269 | Msa0140130:CDS |
TTGGGTCAGCAGGGACATGA+AGG | 0.556129 | 1_3:-74285258 | Msa0140130:intron |
AGCTTAGGGAATTGAGACCT+TGG | 0.556296 | 1_3:+74279762 | None:intergenic |
GAAACAATGACGGATACATT+GGG | 0.557772 | 1_3:+74280733 | None:intergenic |
TCTGCTGTGAATAGGTTGGA+TGG | 0.559713 | 1_3:-74280824 | Msa0140130:intron |
ACGAGTTCCTGCAGTTGGTA+GGG | 0.560237 | 1_3:+74284992 | None:intergenic |
GAGTGGTAGAGTTAGTGCAT+TGG | 0.561799 | 1_3:-74285469 | Msa0140130:five_prime_UTR |
ATAGTTGAATTGATTGTGGC+TGG | 0.561841 | 1_3:+74279525 | None:intergenic |
GGAGAAGCACATCATTCTCC+CGG | 0.562050 | 1_3:+74278571 | None:intergenic |
GAAATGCATGGACTAGGCTC+AGG | 0.562764 | 1_3:-74278340 | Msa0140130:CDS |
GCCAGTGACACCAGCACACA+TGG | 0.563705 | 1_3:-74284344 | Msa0140130:CDS |
GGAATGCAGAACATGGGTAG+TGG | 0.565667 | 1_3:-74279638 | Msa0140130:CDS |
GAAACTTCCATTCAACATCA+TGG | 0.566654 | 1_3:+74284148 | None:intergenic |
CTATCGAGTCTAACGAGAAG+TGG | 0.569823 | 1_3:-74279194 | Msa0140130:CDS |
ATAGGTTTACAAATCGGGAT+CGG | 0.571157 | 1_3:-74278724 | Msa0140130:intron |
GTAGAAGTTGGAACATTCAA+AGG | 0.571674 | 1_3:+74277908 | None:intergenic |
CTGCTGTGAATAGGTTGGAT+GGG | 0.572286 | 1_3:-74280823 | Msa0140130:intron |
ACTGTTCATTCATCAATGAC+TGG | 0.577646 | 1_3:+74279171 | None:intergenic |
GCCACAATCAATTCAACTAT+CGG | 0.578034 | 1_3:-74279522 | Msa0140130:CDS |
GGATGGGATGAATCAACAGC+AGG | 0.579902 | 1_3:-74280807 | Msa0140130:CDS |
TGAAGATGAATCTTGCATGC+AGG | 0.583324 | 1_3:+74278878 | None:intergenic |
AGCAGGAGAGAGACAGCCAC+GGG | 0.584100 | 1_3:-74280790 | Msa0140130:CDS |
AAGACCCTCTTAGATCAGGC+TGG | 0.586173 | 1_3:-74278611 | Msa0140130:CDS |
AGAGAATCCTCCATGTGTGC+TGG | 0.589174 | 1_3:+74284334 | None:intergenic |
TTAGTGTCCCTACCAACTGC+AGG | 0.589428 | 1_3:-74284999 | Msa0140130:CDS |
GACACTACAGCCATTGACTC+CGG | 0.591291 | 1_3:-74284545 | Msa0140130:intron |
CCTGATTGAAGGTAATGGGT+AGG | 0.593050 | 1_3:+74279575 | None:intergenic |
ACAACTAACCGAGAAATCGA+TGG | 0.593493 | 1_3:-74284784 | Msa0140130:CDS |
AATGTAACCTTCAGGTTCCA+CGG | 0.595104 | 1_3:-74278221 | Msa0140130:three_prime_UTR |
AAGCAACAACTGCTCTAATG+TGG | 0.597526 | 1_3:-74279805 | Msa0140130:CDS |
ACTTTCTCAGCTGCGCGACG+AGG | 0.597999 | 1_3:+74284308 | None:intergenic |
AGCACAAGAACTAATTGCTA+GGG | 0.598008 | 1_3:-74284175 | Msa0140130:CDS |
AGTGCTAAGAGACTTGTAGC+TGG | 0.598514 | 1_3:-74282479 | Msa0140130:CDS |
TCACTGGACAGAACAGATGA+TGG | 0.599608 | 1_3:+74282279 | None:intergenic |
ATGGACTAGGCTCAGGACAA+AGG | 0.599712 | 1_3:-74278333 | Msa0140130:CDS |
CACGAGTTCCTGCAGTTGGT+AGG | 0.600545 | 1_3:+74284991 | None:intergenic |
TCAACAATACCAAGCCATGT+TGG | 0.601545 | 1_3:-74279669 | Msa0140130:CDS |
TTAGGGGAGTCTGGATTCCA+GGG | 0.601940 | 1_3:-74278912 | Msa0140130:CDS |
GATCAGGCGGTAGAAATGCA+TGG | 0.603040 | 1_3:-74278352 | Msa0140130:CDS |
ACCACACGAGTTCCTGCAGT+TGG | 0.604462 | 1_3:+74284987 | None:intergenic |
AGTGGTATGACAAACTCAGA+TGG | 0.604732 | 1_3:+74282084 | None:intergenic |
CGTGTGGTTTACTTCCCTCA+GGG | 0.606712 | 1_3:-74284972 | Msa0140130:CDS |
GACTCGATCCAACTTTACTC+GGG | 0.608927 | 1_3:-74279703 | Msa0140130:CDS |
ATATGAAGCTTTCAACATCA+GGG | 0.611135 | 1_3:-74285281 | Msa0140130:CDS |
ACATCAGGGTTGGGTCAGCA+GGG | 0.612751 | 1_3:-74285267 | Msa0140130:CDS |
ATGTGACATTGCGCTGCCAA+AGG | 0.613369 | 1_3:+74279100 | None:intergenic |
CAGAAACAGCATGACCCAGT+TGG | 0.614530 | 1_3:+74285651 | None:intergenic |
ACTGCTTCAACAACTGACAC+TGG | 0.614943 | 1_3:-74278948 | Msa0140130:CDS |
AGCTATGGCATGCATGTGCG+GGG | 0.615544 | 1_3:-74285025 | Msa0140130:CDS |
AATCTGAGGGGAAACAATGA+CGG | 0.616725 | 1_3:+74280723 | None:intergenic |
CTGAAGAGTCAAGTGTCCGC+AGG | 0.618203 | 1_3:-74281990 | Msa0140130:intron |
TGTAATTCGGGACAGTGGTG+GGG | 0.618990 | 1_3:+74278970 | None:intergenic |
ACCGATAGTTGAATTGATTG+TGG | 0.620991 | 1_3:+74279521 | None:intergenic |
CGTGCAGGTTAAGTCCAACT+GGG | 0.621805 | 1_3:-74285665 | Msa0140130:five_prime_UTR |
AGTGTAATTCGGGACAGTGG+TGG | 0.621924 | 1_3:+74278968 | None:intergenic |
CAACTAACCGAGAAATCGAT+GGG | 0.622225 | 1_3:-74284783 | Msa0140130:CDS |
ACTCCCACGGATCGTCGCCA+AGG | 0.622867 | 1_3:+74278550 | None:intergenic |
TTTGGAGTCCATGATTGTTG+TGG | 0.623560 | 1_3:+74279146 | None:intergenic |
GTATGAACATTACCAGCGGA+GGG | 0.624407 | 1_3:+74284282 | None:intergenic |
TGCAGGCATATAGAGAACCC+TGG | 0.624512 | 1_3:+74278895 | None:intergenic |
ATAGTGATAGGCCACAAAAG+AGG | 0.625150 | 1_3:-74285751 | Msa0140130:five_prime_UTR |
ATATGACGGTGACGGCACAT+TGG | 0.626796 | 1_3:+74279325 | None:intergenic |
CTGCTATCGTGAGCTGCGAG+AGG | 0.627205 | 1_3:-74278670 | Msa0140130:CDS |
CAATCACCATATGAAAAGCA+CGG | 0.627382 | 1_3:+74282451 | None:intergenic |
CAGCAGGAGAGAGACAGCCA+CGG | 0.630554 | 1_3:-74280791 | Msa0140130:CDS |
TAATCAAGTGAGCCAATCGA+TGG | 0.632439 | 1_3:+74278265 | None:intergenic |
GCTGCCAGCCTGATCTAAGA+GGG | 0.635102 | 1_3:+74278607 | None:intergenic |
ATGGATGTAGGAAGAGCAGA+AGG | 0.635306 | 1_3:-74284438 | Msa0140130:intron |
TCCAGTGATAGTATGCACAT+TGG | 0.639677 | 1_3:-74282264 | Msa0140130:CDS |
GAAACCGATACTTACTCCCA+CGG | 0.639696 | 1_3:+74278537 | None:intergenic |
TGTACTTGTGTACTCTAAGG+AGG | 0.643551 | 1_3:-74277979 | Msa0140130:three_prime_UTR |
AAATGTACCAAGCAAAGATG+AGG | 0.645243 | 1_3:+74280677 | None:intergenic |
TCAAGTGAGCCAATCGATGG+TGG | 0.647291 | 1_3:+74278268 | None:intergenic |
GTCAAATGTTTGGAATTGAG+GGG | 0.651017 | 1_3:-74278641 | Msa0140130:CDS |
GCTCTAATGTGGATGAGAGG+TGG | 0.652265 | 1_3:-74279794 | Msa0140130:CDS |
TTTGTGTCAATCTGAACTTG+AGG | 0.652883 | 1_3:-74278055 | Msa0140130:three_prime_UTR |
TCAGAAGATGGGAGATCAGG+CGG | 0.653224 | 1_3:-74278365 | Msa0140130:CDS |
AGTATGAACATTACCAGCGG+AGG | 0.659622 | 1_3:+74284281 | None:intergenic |
GTCTTGACCGTGGAACCTGA+AGG | 0.660515 | 1_3:+74278214 | None:intergenic |
CAAAGAAATTGTCTTGACCG+TGG | 0.660754 | 1_3:+74278204 | None:intergenic |
TGAAGTTGGCAAACCAACTG+AGG | 0.662508 | 1_3:+74284733 | None:intergenic |
ACCTGCTCACTATGACCCTG+AGG | 0.662847 | 1_3:+74284957 | None:intergenic |
AGTTGGCAAACCAACTGAGG+TGG | 0.663588 | 1_3:+74284736 | None:intergenic |
TGGGTAGTGGATATCTCATG+AGG | 0.664146 | 1_3:-74279625 | Msa0140130:CDS |
TGTGGCTGGTGAAGTTGCAA+AGG | 0.664859 | 1_3:+74279539 | None:intergenic |
ACCAACTGCAGGAACTCGTG+TGG | 0.664970 | 1_3:-74284988 | Msa0140130:CDS |
CTATCGATTGAGACCGAGTG+AGG | 0.666510 | 1_3:+74285770 | None:intergenic |
AGAGGTGGAACTGCAGACCA+AGG | 0.666574 | 1_3:-74279779 | Msa0140130:CDS |
AGTTGCTGAAGCATGAGCAG+CGG | 0.669024 | 1_3:+74282230 | None:intergenic |
TGGTGCATCAACACAATTAG+GGG | 0.669040 | 1_3:-74278928 | Msa0140130:CDS |
ATTTCCCATAATGACACCCG+TGG | 0.669764 | 1_3:+74280774 | None:intergenic |
GCAGTTGGTAGGGACACTAA+GGG | 0.670395 | 1_3:+74285002 | None:intergenic |
AGAAATACGTGTATGGTACA+CGG | 0.672449 | 1_3:+74282044 | None:intergenic |
AGCAGTGTAATTCGGGACAG+TGG | 0.673487 | 1_3:+74278965 | None:intergenic |
CCTGCTCACTATGACCCTGA+GGG | 0.674698 | 1_3:+74284958 | None:intergenic |
GCAGCTGGAATGCAGAACAT+GGG | 0.677904 | 1_3:-74279644 | Msa0140130:CDS |
GAAGTTGGAACATTCAAAGG+AGG | 0.681937 | 1_3:+74277911 | None:intergenic |
GCATCTGAATCACAATGTGG+AGG | 0.684419 | 1_3:+74279044 | None:intergenic |
GTGATCTGGATGCTGTTCGG+TGG | 0.685536 | 1_3:-74281647 | Msa0140130:CDS |
ACTGCTCTAATGTGGATGAG+AGG | 0.692595 | 1_3:-74279797 | Msa0140130:CDS |
TAAATAATAAAGATGGCACG+TGG | 0.713144 | 1_3:+74278135 | None:intergenic |
CATGGACGTTTCAATCTGAG+GGG | 0.715415 | 1_3:+74280711 | None:intergenic |
TGGGCATCTGAATCACAATG+TGG | 0.724623 | 1_3:+74279041 | None:intergenic |
AGTGACACCAGCACACATGG+AGG | 0.749790 | 1_3:-74284341 | Msa0140130:CDS |
GTGGTTGTCCAGAAACAATG+TGG | 0.765957 | 1_3:+74278287 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTTTCATTATTGTTT+TGG | - | chr1_3:74278239-74278258 | Msa0140130:three_prime_UTR | 10.0% |
!!! | TTTTTTTTCATTATTGTTTT+GGG | - | chr1_3:74278240-74278259 | Msa0140130:three_prime_UTR | 10.0% |
!! | GAAAAAAAAATATATGTATA+GGG | + | chr1_3:74279962-74279981 | None:intergenic | 10.0% |
!! | TGAAAAAAAAATATATGTAT+AGG | + | chr1_3:74279963-74279982 | None:intergenic | 10.0% |
!!! | GTTAAACAATTTAATATTTT+CGG | + | chr1_3:74280159-74280178 | None:intergenic | 10.0% |
!! | TAGAATTTGAAAAAATAATT+AGG | + | chr1_3:74282572-74282591 | None:intergenic | 10.0% |
!!! | ACTTTTTAATAAATTCTTAC+AGG | - | chr1_3:74279984-74280003 | Msa0140130:intron | 15.0% |
!!! | ACTCAATATTTTTAAACAAT+AGG | - | chr1_3:74280071-74280090 | Msa0140130:intron | 15.0% |
!!! | CTTTTTGAAAACTTTTAAAT+AGG | + | chr1_3:74280100-74280119 | None:intergenic | 15.0% |
!!! | ATATTTTTTTTTTGTGAAGA+AGG | - | chr1_3:74280570-74280589 | Msa0140130:intron | 15.0% |
!!! | TATTTTTTTTTTGTGAAGAA+GGG | - | chr1_3:74280571-74280590 | Msa0140130:intron | 15.0% |
!! | ATTAAAATAGAGAAAAACAT+GGG | + | chr1_3:74282346-74282365 | None:intergenic | 15.0% |
!!! | TAAGCAAAAATTTACATTTT+AGG | + | chr1_3:74283783-74283802 | None:intergenic | 15.0% |
!! | TTATGTATGATAAGAAATTT+AGG | - | chr1_3:74285694-74285713 | Msa0140130:five_prime_UTR | 15.0% |
!!! | TCTTTTCTTTGCATATATAA+GGG | + | chr1_3:74277903-74277922 | None:intergenic | 20.0% |
!!! | TTCTTTTCTTTGCATATATA+AGG | + | chr1_3:74277904-74277923 | None:intergenic | 20.0% |
!! | AAACTGAAAAACAAAGTAAA+GGG | + | chr1_3:74278054-74278073 | None:intergenic | 20.0% |
!! | AAAACTGAAAAACAAAGTAA+AGG | + | chr1_3:74278055-74278074 | None:intergenic | 20.0% |
!!! | TTTTTAGTGTTTTACCTTAA+AGG | - | chr1_3:74278212-74278231 | Msa0140130:three_prime_UTR | 20.0% |
!!! | TTTTAGTGTTTTACCTTAAA+GGG | - | chr1_3:74278213-74278232 | Msa0140130:three_prime_UTR | 20.0% |
!! | TGAAGTTAATTGAAAGTTTA+TGG | - | chr1_3:74278376-74278395 | Msa0140130:CDS | 20.0% |
!! | ACTCAATAGTACTATAAATT+TGG | + | chr1_3:74278427-74278446 | None:intergenic | 20.0% |
!! | AAAGAAGATATAAAGGAAAA+GGG | - | chr1_3:74278462-74278481 | Msa0140130:intron | 20.0% |
!!! | CATTTCTTAGTATTTTGTTT+TGG | - | chr1_3:74278578-74278597 | Msa0140130:CDS | 20.0% |
!! | AAACAATTCAATAGATTCTA+TGG | - | chr1_3:74278926-74278945 | Msa0140130:CDS | 20.0% |
!!! | ATGCATTTCTCTTAAATTTT+GGG | - | chr1_3:74279553-74279572 | Msa0140130:CDS | 20.0% |
!! | AACTTAATCTTTCTTTAGTA+TGG | + | chr1_3:74279823-74279842 | None:intergenic | 20.0% |
!! | TACTAAAGAAAGATTAAGTT+AGG | - | chr1_3:74279823-74279842 | Msa0140130:intron | 20.0% |
!!! | TCTACTATCATTTTAACAAT+GGG | + | chr1_3:74280327-74280346 | None:intergenic | 20.0% |
!!! | TTGTTTTTGCTAGTTTATAT+CGG | + | chr1_3:74280803-74280822 | None:intergenic | 20.0% |
!! | TAAACTAGCAAAAACAAAAT+TGG | - | chr1_3:74280806-74280825 | Msa0140130:CDS | 20.0% |
!!! | GTTTATTTGTTGTTATGTAT+TGG | + | chr1_3:74281174-74281193 | None:intergenic | 20.0% |
!! | AAAGAAAAATAAGTAGCTTT+AGG | + | chr1_3:74281842-74281861 | None:intergenic | 20.0% |
!! | TTATATTAAATCGCATATCA+CGG | + | chr1_3:74281916-74281935 | None:intergenic | 20.0% |
!! | TAAGTAAATGAGAAATAGTT+TGG | + | chr1_3:74282061-74282080 | None:intergenic | 20.0% |
!! | GAAGTTTACATAATAACAAT+AGG | + | chr1_3:74282241-74282260 | None:intergenic | 20.0% |
!! | CATTAAAATAGAGAAAAACA+TGG | + | chr1_3:74282347-74282366 | None:intergenic | 20.0% |
!!! | CATGTTTTTCTCTATTTTAA+TGG | - | chr1_3:74282345-74282364 | Msa0140130:intron | 20.0% |
!!! | ATTAAACAGAATACGTTTTA+AGG | + | chr1_3:74282491-74282510 | None:intergenic | 20.0% |
!! | AAAAAATAATTAGGACATGA+AGG | + | chr1_3:74282563-74282582 | None:intergenic | 20.0% |
!! | AATCAGATATTTATAAACTC+TGG | - | chr1_3:74282642-74282661 | Msa0140130:intron | 20.0% |
!! | ATTCACAAATAATATAGAAC+AGG | + | chr1_3:74282685-74282704 | None:intergenic | 20.0% |
!!! | GTTTTACAACTTTCTTATAT+TGG | - | chr1_3:74282785-74282804 | Msa0140130:intron | 20.0% |
!! | TCCACTTATTAATGTTATTA+TGG | - | chr1_3:74282809-74282828 | Msa0140130:intron | 20.0% |
!! | ATAGTCAAAAAGAAAAACTA+CGG | + | chr1_3:74283171-74283190 | None:intergenic | 20.0% |
!!! | ATTTTTTAGTTAAATGGAGA+TGG | - | chr1_3:74283262-74283281 | Msa0140130:intron | 20.0% |
!!! | TATTGTTGATCCATTTTTTT+TGG | - | chr1_3:74283412-74283431 | Msa0140130:intron | 20.0% |
!!! | ATTGTTGATCCATTTTTTTT+GGG | - | chr1_3:74283413-74283432 | Msa0140130:intron | 20.0% |
!!! | GTTTAATTTTGTCTTTTCAT+AGG | - | chr1_3:74285037-74285056 | Msa0140130:CDS | 20.0% |
!!! | GTTGACATTTTCTTTATTTT+TGG | - | chr1_3:74285325-74285344 | Msa0140130:five_prime_UTR | 20.0% |
!!! | TTATAGTTGTGATTTTAATG+AGG | + | chr1_3:74285896-74285915 | None:intergenic | 20.0% |
!! | TTTTCTTTGCATATATAAGG+GGG | + | chr1_3:74277901-74277920 | None:intergenic | 25.0% |
!! | CTTTTCTTTGCATATATAAG+GGG | + | chr1_3:74277902-74277921 | None:intergenic | 25.0% |
!!! | AGTTTTTTTTTCTGTCTTCA+TGG | - | chr1_3:74278069-74278088 | Msa0140130:three_prime_UTR | 25.0% |
! | GAAAAAAAAACAACCCTTTA+AGG | + | chr1_3:74278229-74278248 | None:intergenic | 25.0% |
!!! | ATTATTGTTTTGGGATGTTT+TGG | - | chr1_3:74278249-74278268 | Msa0140130:exon | 25.0% |
!!! | GTTTTGATAGATGAAATGAT+TGG | - | chr1_3:74278332-74278351 | Msa0140130:CDS | 25.0% |
!!! | AAAGTTTATGGCTTTAAGTT+AGG | - | chr1_3:74278388-74278407 | Msa0140130:CDS | 25.0% |
!!! | AAGTTTATGGCTTTAAGTTA+GGG | - | chr1_3:74278389-74278408 | Msa0140130:CDS | 25.0% |
! | GAAAGAGAAAGAAGATATAA+AGG | - | chr1_3:74278455-74278474 | Msa0140130:intron | 25.0% |
! | GAAAGAAGATATAAAGGAAA+AGG | - | chr1_3:74278461-74278480 | Msa0140130:intron | 25.0% |
! | GCAAAAAGAAAGAATTGAAA+TGG | + | chr1_3:74278550-74278569 | None:intergenic | 25.0% |
! | AGGAAATGAAAAAACTTACA+AGG | + | chr1_3:74278678-74278697 | None:intergenic | 25.0% |
! | AAGCAAATTGAAACATTGTA+GGG | + | chr1_3:74278863-74278882 | None:intergenic | 25.0% |
! | AATTCAATAGATTCTATGGA+TGG | - | chr1_3:74278930-74278949 | Msa0140130:CDS | 25.0% |
!! | GTAATTTGTGTTTGTAACTA+TGG | - | chr1_3:74279322-74279341 | Msa0140130:CDS | 25.0% |
!! | GATGCATTTCTCTTAAATTT+TGG | - | chr1_3:74279552-74279571 | Msa0140130:CDS | 25.0% |
! | AAATAACAAGATCGTAAGAA+TGG | + | chr1_3:74279686-74279705 | None:intergenic | 25.0% |
!!! | ACGATCTTGTTATTTATATC+AGG | - | chr1_3:74279691-74279710 | Msa0140130:CDS | 25.0% |
!!! | CGATCTTGTTATTTATATCA+GGG | - | chr1_3:74279692-74279711 | Msa0140130:CDS | 25.0% |
! | AAAAATGACATTTCTGATCT+TGG | - | chr1_3:74280040-74280059 | Msa0140130:intron | 25.0% |
! | GCACATGATAATTAGAATAA+AGG | - | chr1_3:74280269-74280288 | Msa0140130:intron | 25.0% |
!!! | CTCTACTATCATTTTAACAA+TGG | + | chr1_3:74280328-74280347 | None:intergenic | 25.0% |
! | AAATTCATATAACTAGAGAG+CGG | - | chr1_3:74280423-74280442 | Msa0140130:intron | 25.0% |
!! | TTATACCTAATTGTTTTCCT+TGG | + | chr1_3:74280449-74280468 | None:intergenic | 25.0% |
! | TTGAGAGATTTAGATGTAAA+TGG | - | chr1_3:74280471-74280490 | Msa0140130:intron | 25.0% |
! | AGTAGTTAGCAATATATATG+TGG | + | chr1_3:74280697-74280716 | None:intergenic | 25.0% |
!! | GATTTTCCATATACTTACAT+TGG | + | chr1_3:74280752-74280771 | None:intergenic | 25.0% |
!!! | TGTTTTTGCTAGTTTATATC+GGG | + | chr1_3:74280802-74280821 | None:intergenic | 25.0% |
! | TGAGATTAACTTAAAACAAC+AGG | + | chr1_3:74281031-74281050 | None:intergenic | 25.0% |
! | TCTAATTTAGAGAAATGTAC+TGG | - | chr1_3:74281128-74281147 | Msa0140130:intron | 25.0% |
!! | ATTGTTTCCTTTTTCTCTTT+TGG | - | chr1_3:74281347-74281366 | Msa0140130:intron | 25.0% |
! | TCCTAAAAGCAAAAATACAT+GGG | + | chr1_3:74281421-74281440 | None:intergenic | 25.0% |
! | TTCCTAAAAGCAAAAATACA+TGG | + | chr1_3:74281422-74281441 | None:intergenic | 25.0% |
!! | TCTTTTGACAGTTTATATCA+TGG | - | chr1_3:74281661-74281680 | Msa0140130:CDS | 25.0% |
!! | CTTTTGACAGTTTATATCAT+GGG | - | chr1_3:74281662-74281681 | Msa0140130:CDS | 25.0% |
!!! | GCTTTGATATATTTTGAAAG+TGG | + | chr1_3:74281716-74281735 | None:intergenic | 25.0% |
!!! | TATAAAGTGTTGTCAAATAG+TGG | - | chr1_3:74281931-74281950 | Msa0140130:intron | 25.0% |
! | GAATTTGATTGGGAATTAAA+AGG | + | chr1_3:74282411-74282430 | None:intergenic | 25.0% |
! | GCCATAATAACATTAATAAG+TGG | + | chr1_3:74282813-74282832 | None:intergenic | 25.0% |
! | TATTACACAGATAAACTGTA+AGG | + | chr1_3:74283130-74283149 | None:intergenic | 25.0% |
! | TACAGTTTATCTGTGTAATA+TGG | - | chr1_3:74283130-74283149 | Msa0140130:intron | 25.0% |
! | GATGGAAAAAAGTGAAAATA+AGG | - | chr1_3:74283280-74283299 | Msa0140130:intron | 25.0% |
! | ATGAAAGCTACAAAATCTAA+AGG | + | chr1_3:74283357-74283376 | None:intergenic | 25.0% |
!! | AAGTCAAATTGTTTTCATGT+AGG | + | chr1_3:74283591-74283610 | None:intergenic | 25.0% |
!! | TTTTTGCTTATAATAGTGAC+CGG | + | chr1_3:74283686-74283705 | None:intergenic | 25.0% |
!!! | AAATAACCACAGGTTTTTTT+GGG | + | chr1_3:74283895-74283914 | None:intergenic | 25.0% |
!!! | AAAATAACCACAGGTTTTTT+TGG | + | chr1_3:74283896-74283915 | None:intergenic | 25.0% |
! | AATTATTGTTTCCTGATTGA+AGG | + | chr1_3:74284218-74284237 | None:intergenic | 25.0% |
!!! | AAATCTGGTTTTGAATATGA+CGG | + | chr1_3:74284471-74284490 | None:intergenic | 25.0% |
!! | ATATTCAAAACCAGATTTTC+TGG | - | chr1_3:74284473-74284492 | Msa0140130:intron | 25.0% |
! | ATCATACCTTTACAAATGTT+GGG | + | chr1_3:74284968-74284987 | None:intergenic | 25.0% |
! | AATCATACCTTTACAAATGT+TGG | + | chr1_3:74284969-74284988 | None:intergenic | 25.0% |
!! | CTTTTCATAGGTTTACAAAT+CGG | - | chr1_3:74285049-74285068 | Msa0140130:CDS | 25.0% |
!! | TTTTCATAGGTTTACAAATC+GGG | - | chr1_3:74285050-74285069 | Msa0140130:CDS | 25.0% |
! | GTATATCAAAATACTTTCAC+CGG | - | chr1_3:74285384-74285403 | Msa0140130:five_prime_UTR | 25.0% |
! | CCTGACATAAATAATAAAGA+TGG | + | chr1_3:74285654-74285673 | None:intergenic | 25.0% |
! | CCATCTTTATTATTTATGTC+AGG | - | chr1_3:74285651-74285670 | Msa0140130:five_prime_UTR | 25.0% |
AAGAGAGAATTAAAGGAAGA+GGG | + | chr1_3:74277931-74277950 | None:intergenic | 30.0% | |
AAAGAGAGAATTAAAGGAAG+AGG | + | chr1_3:74277932-74277951 | None:intergenic | 30.0% | |
AGAGAGAAAGAGAGAATTAA+AGG | + | chr1_3:74277938-74277957 | None:intergenic | 30.0% | |
!! | TTTTGGTTGTGTTTGGATTT+TGG | - | chr1_3:74278266-74278285 | Msa0140130:CDS | 30.0% |
! | TTTGGTTGTGTTTGGATTTT+GGG | - | chr1_3:74278267-74278286 | Msa0140130:CDS | 30.0% |
!! | GGTTTGTTTGATTTTGAGTA+TGG | - | chr1_3:74278288-74278307 | Msa0140130:CDS | 30.0% |
TTGGTGAATGTGAATTGAAA+TGG | - | chr1_3:74278351-74278370 | Msa0140130:CDS | 30.0% | |
ATATGAAGCTTTCAACATCA+GGG | - | chr1_3:74278498-74278517 | Msa0140130:intron | 30.0% | |
GGTTGTTTAAACAACACAAA+AGG | + | chr1_3:74278657-74278676 | None:intergenic | 30.0% | |
CCATCATCAAAAAGAGAAAA+AGG | + | chr1_3:74278698-74278717 | None:intergenic | 30.0% | |
! | CCTTTTTCTCTTTTTGATGA+TGG | - | chr1_3:74278695-74278714 | Msa0140130:CDS | 30.0% |
!!! | TTTCTCTTTTTGATGATGGT+AGG | - | chr1_3:74278699-74278718 | Msa0140130:CDS | 30.0% |
CAAGCAAATTGAAACATTGT+AGG | + | chr1_3:74278864-74278883 | None:intergenic | 30.0% | |
! | ATGTTTCAATTTGCTTGCTA+TGG | - | chr1_3:74278867-74278886 | Msa0140130:CDS | 30.0% |
CAAAACAAAGTTTGCAAGAA+AGG | + | chr1_3:74278905-74278924 | None:intergenic | 30.0% | |
!! | CTTTCTTGCAAACTTTGTTT+TGG | - | chr1_3:74278903-74278922 | Msa0140130:CDS | 30.0% |
!!! | AACATGTTTTGATTGATTCC+AGG | - | chr1_3:74278964-74278983 | Msa0140130:CDS | 30.0% |
CTTGTTTGATTAACTCTTGT+TGG | - | chr1_3:74279131-74279150 | Msa0140130:CDS | 30.0% | |
TACATTTCTTCCTATGGAAT+TGG | - | chr1_3:74279365-74279384 | Msa0140130:CDS | 30.0% | |
ACATTTCTTCCTATGGAATT+GGG | - | chr1_3:74279366-74279385 | Msa0140130:CDS | 30.0% | |
! | AAGTTTCGACATATTTTTCG+AGG | - | chr1_3:74279647-74279666 | Msa0140130:CDS | 30.0% |
CAGTAATCTAAGTATTTCAC+AGG | + | chr1_3:74279783-74279802 | None:intergenic | 30.0% | |
CTGTGAAATACTTAGATTAC+TGG | - | chr1_3:74279781-74279800 | Msa0140130:CDS | 30.0% | |
!! | TTTTCGGTTGTTTTGCATTA+TGG | + | chr1_3:74280143-74280162 | None:intergenic | 30.0% |
!!! | TAGTAGAGTCTCTTTTTTGA+TGG | - | chr1_3:74280340-74280359 | Msa0140130:intron | 30.0% |
!!! | AGTCTCTTTTTTGATGGTTT+GGG | - | chr1_3:74280346-74280365 | Msa0140130:intron | 30.0% |
TTCCTTTCTCATTATGAATC+CGG | + | chr1_3:74280545-74280564 | None:intergenic | 30.0% | |
GTATCACCAATGTAAGTATA+TGG | - | chr1_3:74280743-74280762 | Msa0140130:CDS | 30.0% | |
TGAAAGGAAGATTTGTGTTA+CGG | - | chr1_3:74280935-74280954 | Msa0140130:intron | 30.0% | |
!! | TCCCATGTATTTTTGCTTTT+AGG | - | chr1_3:74281417-74281436 | Msa0140130:intron | 30.0% |
GAAGGAAAAATACTATCATC+TGG | - | chr1_3:74282025-74282044 | Msa0140130:CDS | 30.0% | |
TACAAAATGAAAGTGAGACA+CGG | + | chr1_3:74282085-74282104 | None:intergenic | 30.0% | |
! | ACTTTCATTTTGTAGGTACA+TGG | - | chr1_3:74282091-74282110 | Msa0140130:CDS | 30.0% |
! | CTTTCATTTTGTAGGTACAT+GGG | - | chr1_3:74282092-74282111 | Msa0140130:CDS | 30.0% |
TAAGTAAAGATGTCAATGCA+AGG | - | chr1_3:74282183-74282202 | Msa0140130:intron | 30.0% | |
ATAACTAAATAGTGGCATAG+TGG | + | chr1_3:74282268-74282287 | None:intergenic | 30.0% | |
CAAGGCATATAACTAAATAG+TGG | + | chr1_3:74282276-74282295 | None:intergenic | 30.0% | |
AAAAACATGGGAAGATATCT+AGG | + | chr1_3:74282334-74282353 | None:intergenic | 30.0% | |
TTGATTGGGAATTAAAAGGA+AGG | + | chr1_3:74282407-74282426 | None:intergenic | 30.0% | |
!!! | CAGAATACGTTTTAAGGATT+AGG | + | chr1_3:74282485-74282504 | None:intergenic | 30.0% |
! | TAACTTCCTGAATATTTTGC+TGG | + | chr1_3:74282608-74282627 | None:intergenic | 30.0% |
TTCAGGAAGTTATGTTTGTA+AGG | - | chr1_3:74282616-74282635 | Msa0140130:intron | 30.0% | |
ATAATATAGAACAGGCAAAG+TGG | + | chr1_3:74282677-74282696 | None:intergenic | 30.0% | |
AACTGTACCATATCTCTAAA+TGG | - | chr1_3:74282730-74282749 | Msa0140130:intron | 30.0% | |
TCAGAAACCATTTAGAGATA+TGG | + | chr1_3:74282740-74282759 | None:intergenic | 30.0% | |
TTTAACTGTGACAATCACAA+AGG | + | chr1_3:74282891-74282910 | None:intergenic | 30.0% | |
! | TCTTTTTATCTGCTGTGAAT+AGG | - | chr1_3:74282947-74282966 | Msa0140130:intron | 30.0% |
TACATTGGGAATGTTGTTAA+AGG | + | chr1_3:74283035-74283054 | None:intergenic | 30.0% | |
TCAAAAAGAAAAACTACGGA+TGG | + | chr1_3:74283167-74283186 | None:intergenic | 30.0% | |
ATATATACAAACACACACAC+AGG | + | chr1_3:74283332-74283351 | None:intergenic | 30.0% | |
! | AAAATCCTGTCTCTATGTTT+TGG | + | chr1_3:74283391-74283410 | None:intergenic | 30.0% |
TTCAAACAGCCCAAAAAAAA+TGG | + | chr1_3:74283425-74283444 | None:intergenic | 30.0% | |
!!! | TGACTTTTGAGTTTATCTAC+TGG | - | chr1_3:74283446-74283465 | Msa0140130:intron | 30.0% |
ACTTATTCATAAGCACATGT+AGG | - | chr1_3:74283636-74283655 | Msa0140130:intron | 30.0% | |
! | TTTTTGCTTATACTAGTGAC+CGG | - | chr1_3:74283793-74283812 | Msa0140130:intron | 30.0% |
TTTATCCAAACAGTGTCTTA+GGG | - | chr1_3:74283841-74283860 | Msa0140130:intron | 30.0% | |
!! | AAAAACCTGTGGTTATTTTG+AGG | - | chr1_3:74283897-74283916 | Msa0140130:intron | 30.0% |
!!! | AAAACCTGTGGTTATTTTGA+GGG | - | chr1_3:74283898-74283917 | Msa0140130:intron | 30.0% |
TGTTGAAAATTCACCATTTG+TGG | + | chr1_3:74284180-74284199 | None:intergenic | 30.0% | |
! | TATTACTTGGTTTCTGAAGA+AGG | + | chr1_3:74284344-74284363 | None:intergenic | 30.0% |
TGGAGTTCTTGATTATTACT+TGG | + | chr1_3:74284357-74284376 | None:intergenic | 30.0% | |
ATGTTTGAATCCAGAAAATC+TGG | + | chr1_3:74284486-74284505 | None:intergenic | 30.0% | |
CGATCAAAACTTCTAATCTT+TGG | - | chr1_3:74285293-74285312 | Msa0140130:exon | 30.0% | |
ATTCACGAATGATCTACAAA+GGG | + | chr1_3:74285356-74285375 | None:intergenic | 30.0% | |
TATTCACGAATGATCTACAA+AGG | + | chr1_3:74285357-74285376 | None:intergenic | 30.0% | |
TAAATAATAAAGATGGCACG+TGG | + | chr1_3:74285647-74285666 | None:intergenic | 30.0% | |
!! | GATTTTAATGAGGTAGAAGT+TGG | + | chr1_3:74285886-74285905 | None:intergenic | 30.0% |
!! | GTTTGATTTTGAGTATGGAG+TGG | - | chr1_3:74278293-74278312 | Msa0140130:CDS | 35.0% |
GATATGAAGCTTTCAACATC+AGG | - | chr1_3:74278497-74278516 | Msa0140130:intron | 35.0% | |
AATGTCTGAATTCTGAGCTA+TGG | - | chr1_3:74278739-74278758 | Msa0140130:intron | 35.0% | |
GCATTGTGACATTATGAAGT+TGG | + | chr1_3:74279063-74279082 | None:intergenic | 35.0% | |
GTGTTTGTAACTATGGATGT+AGG | - | chr1_3:74279329-74279348 | Msa0140130:CDS | 35.0% | |
GAAGGATACATTTCTTCCTA+TGG | - | chr1_3:74279359-74279378 | Msa0140130:CDS | 35.0% | |
GTCTTGCAAAAATAGTTCGA+GGG | + | chr1_3:74279408-74279427 | None:intergenic | 35.0% | |
AGTCTTGCAAAAATAGTTCG+AGG | + | chr1_3:74279409-74279428 | None:intergenic | 35.0% | |
CAAAGTATGAACATTACCAG+CGG | + | chr1_3:74279504-74279523 | None:intergenic | 35.0% | |
CCATCAAGAATCAAACACAA+AGG | + | chr1_3:74279527-74279546 | None:intergenic | 35.0% | |
CCTTTGTGTTTGATTCTTGA+TGG | - | chr1_3:74279524-74279543 | Msa0140130:CDS | 35.0% | |
! | TCTTAAATTTTGGGCTACAC+AGG | - | chr1_3:74279562-74279581 | Msa0140130:CDS | 35.0% |
AGCACAAGAACTAATTGCTA+GGG | - | chr1_3:74279604-74279623 | Msa0140130:CDS | 35.0% | |
GAAACTTCCATTCAACATCA+TGG | + | chr1_3:74279634-74279653 | None:intergenic | 35.0% | |
AAGTATTTCACAGGTGTCAA+AGG | + | chr1_3:74279774-74279793 | None:intergenic | 35.0% | |
ACAAAATTCCCTGTCAAAAC+TGG | + | chr1_3:74279854-74279873 | None:intergenic | 35.0% | |
! | GAATTTTGTGTAAGACCTTG+AGG | - | chr1_3:74279865-74279884 | Msa0140130:intron | 35.0% |
ACATTTCTGATCTTGGCATT+TGG | - | chr1_3:74280047-74280066 | Msa0140130:intron | 35.0% | |
CATTTCTGATCTTGGCATTT+GGG | - | chr1_3:74280048-74280067 | Msa0140130:intron | 35.0% | |
ATATCATTAAAGAGAACGCC+AGG | - | chr1_3:74280295-74280314 | Msa0140130:intron | 35.0% | |
!!! | GAGTCTCTTTTTTGATGGTT+TGG | - | chr1_3:74280345-74280364 | Msa0140130:intron | 35.0% |
CTTATACACACCAAGGAATA+GGG | - | chr1_3:74280385-74280404 | Msa0140130:intron | 35.0% | |
ACTTCGATTGGTATTGTTGT+TGG | - | chr1_3:74280594-74280613 | Msa0140130:intron | 35.0% | |
TATGTGGAACATGTACAAAC+AGG | + | chr1_3:74280681-74280700 | None:intergenic | 35.0% | |
GCATCTAATGATGAAGTTGA+TGG | + | chr1_3:74280774-74280793 | None:intergenic | 35.0% | |
! | TGCTAGTTTATATCGGGATT+TGG | + | chr1_3:74280796-74280815 | None:intergenic | 35.0% |
TAAATCCCAAACTTGAACCA+TGG | - | chr1_3:74280891-74280910 | Msa0140130:intron | 35.0% | |
! | ACAATCCATGGTTCAAGTTT+GGG | + | chr1_3:74280899-74280918 | None:intergenic | 35.0% |
TTAAAGATGCGTTTCTGTTG+TGG | + | chr1_3:74281098-74281117 | None:intergenic | 35.0% | |
AAATGACATGCAAGCAACAA+AGG | + | chr1_3:74281230-74281249 | None:intergenic | 35.0% | |
CAATCACCATATGAAAAGCA+CGG | + | chr1_3:74281331-74281350 | None:intergenic | 35.0% | |
AATTAATGTCCAGCTCTCAA+GGG | + | chr1_3:74281386-74281405 | None:intergenic | 35.0% | |
! | TGAGAAGAATCAGCTTCTTT+TGG | - | chr1_3:74281442-74281461 | Msa0140130:intron | 35.0% |
! | GAGAAGAATCAGCTTCTTTT+GGG | - | chr1_3:74281443-74281462 | Msa0140130:intron | 35.0% |
TTACTGTCTTCTACAATCCA+AGG | - | chr1_3:74281582-74281601 | Msa0140130:intron | 35.0% | |
AGAAATACGTGTATGGTACA+CGG | + | chr1_3:74281738-74281757 | None:intergenic | 35.0% | |
! | TACCATACACGTATTTCTGT+TGG | - | chr1_3:74281740-74281759 | Msa0140130:intron | 35.0% |
TACCAACAGAAATACGTGTA+TGG | + | chr1_3:74281745-74281764 | None:intergenic | 35.0% | |
!! | AAACCGCTATTTTATGCGAT+CGG | - | chr1_3:74281986-74282005 | Msa0140130:intron | 35.0% |
ACAAAATGAAAGTGAGACAC+GGG | + | chr1_3:74282084-74282103 | None:intergenic | 35.0% | |
! | GTGTCTCACTTTCATTTTGT+AGG | - | chr1_3:74282084-74282103 | Msa0140130:CDS | 35.0% |
AATAACAGGCATAAGTGATC+TGG | - | chr1_3:74282118-74282137 | Msa0140130:intron | 35.0% | |
TGAAGGTTGGGAATTTGATT+GGG | + | chr1_3:74282421-74282440 | None:intergenic | 35.0% | |
ATGAAGGTTGGGAATTTGAT+TGG | + | chr1_3:74282422-74282441 | None:intergenic | 35.0% | |
! | GAATATTTTGCTGGCAAAAG+AGG | + | chr1_3:74282599-74282618 | None:intergenic | 35.0% |
! | CTTTTGCCAGCAAAATATTC+AGG | - | chr1_3:74282599-74282618 | Msa0140130:intron | 35.0% |
TTGTGAATGTAAGCCAACAT+AGG | - | chr1_3:74282697-74282716 | Msa0140130:intron | 35.0% | |
GTTCTTCAATTGTCCTATGT+TGG | + | chr1_3:74282713-74282732 | None:intergenic | 35.0% | |
TTTATCTGCTGTGAATAGGT+TGG | - | chr1_3:74282951-74282970 | Msa0140130:intron | 35.0% | |
!! | GAAACAATGACGGATACATT+GGG | + | chr1_3:74283049-74283068 | None:intergenic | 35.0% |
AAATGTACCAAGCAAAGATG+AGG | + | chr1_3:74283105-74283124 | None:intergenic | 35.0% | |
! | AGACTAGTTGGGAGAATTTA+TGG | - | chr1_3:74283483-74283502 | Msa0140130:intron | 35.0% |
GTTTATCCAAACAGTGTCTT+AGG | - | chr1_3:74283840-74283859 | Msa0140130:intron | 35.0% | |
TTATCCAAACAGTGTCTTAG+GGG | - | chr1_3:74283842-74283861 | Msa0140130:intron | 35.0% | |
ACAAGATTCTAGGTAAGTAG+AGG | + | chr1_3:74283937-74283956 | None:intergenic | 35.0% | |
ACCTAGAATCTTGTTACAGA+TGG | - | chr1_3:74283943-74283962 | Msa0140130:intron | 35.0% | |
ACCATCTGTAACAAGATTCT+AGG | + | chr1_3:74283947-74283966 | None:intergenic | 35.0% | |
GTTTCCTGATTGAAGGTAAT+GGG | + | chr1_3:74284211-74284230 | None:intergenic | 35.0% | |
TGTTTCCTGATTGAAGGTAA+TGG | + | chr1_3:74284212-74284231 | None:intergenic | 35.0% | |
ATAGTTGAATTGATTGTGGC+TGG | + | chr1_3:74284257-74284276 | None:intergenic | 35.0% | |
GCCACAATCAATTCAACTAT+CGG | - | chr1_3:74284257-74284276 | Msa0140130:intron | 35.0% | |
ACCGATAGTTGAATTGATTG+TGG | + | chr1_3:74284261-74284280 | None:intergenic | 35.0% | |
! | CAGGTTTTCTGTAAGTACTT+GGG | + | chr1_3:74284313-74284332 | None:intergenic | 35.0% |
! | ACAGGTTTTCTGTAAGTACT+TGG | + | chr1_3:74284314-74284333 | None:intergenic | 35.0% |
ACTGTTCATTCATCAATGAC+TGG | + | chr1_3:74284611-74284630 | None:intergenic | 35.0% | |
AACAGTTACCACAACAATCA+TGG | - | chr1_3:74284625-74284644 | Msa0140130:intron | 35.0% | |
TCCAAAGTATGGAAATATGC+AGG | - | chr1_3:74284650-74284669 | Msa0140130:intron | 35.0% | |
ACCTGCATATTTCCATACTT+TGG | + | chr1_3:74284654-74284673 | None:intergenic | 35.0% | |
ATGTCACATGCACAATATTC+TGG | - | chr1_3:74284693-74284712 | Msa0140130:intron | 35.0% | |
TTGTTGAAGCAGTGTAATTC+GGG | + | chr1_3:74284824-74284843 | None:intergenic | 35.0% | |
GTTGTTGAAGCAGTGTAATT+CGG | + | chr1_3:74284825-74284844 | None:intergenic | 35.0% | |
AAGAACAAACAAAAGCTGTG+CGG | + | chr1_3:74285002-74285021 | None:intergenic | 35.0% | |
ATAGGTTTACAAATCGGGAT+CGG | - | chr1_3:74285055-74285074 | Msa0140130:CDS | 35.0% | |
! | GGTCAAATGTTTGGAATTGA+GGG | - | chr1_3:74285137-74285156 | Msa0140130:intron | 35.0% |
! | GTCAAATGTTTGGAATTGAG+GGG | - | chr1_3:74285138-74285157 | Msa0140130:intron | 35.0% |
GATCATTCGTGAATAACGTT+TGG | - | chr1_3:74285362-74285381 | Msa0140130:five_prime_UTR | 35.0% | |
TTTGTGTCAATCTGAACTTG+AGG | - | chr1_3:74285724-74285743 | Msa0140130:five_prime_UTR | 35.0% | |
GTAGAAGTTGGAACATTCAA+AGG | + | chr1_3:74285874-74285893 | None:intergenic | 35.0% | |
!!! | GGAAGTGTTTTACAGTCACA+GGG | + | chr1_3:74277991-74278010 | None:intergenic | 40.0% |
!!! | AGGAAGTGTTTTACAGTCAC+AGG | + | chr1_3:74277992-74278011 | None:intergenic | 40.0% |
CTGTAAAACACTTCCTCACT+CGG | - | chr1_3:74277996-74278015 | Msa0140130:three_prime_UTR | 40.0% | |
ATAGTGATAGGCCACAAAAG+AGG | - | chr1_3:74278028-74278047 | Msa0140130:three_prime_UTR | 40.0% | |
! | AAAGTAAAGGGCCTCTTTTG+TGG | + | chr1_3:74278042-74278061 | None:intergenic | 40.0% |
!!! | TGGGATGTTTTGGTTGTGTT+TGG | - | chr1_3:74278259-74278278 | Msa0140130:exon | 40.0% |
AAGCTTTCAACATCAGGGTT+GGG | - | chr1_3:74278503-74278522 | Msa0140130:intron | 40.0% | |
!!! | CTCTTTTTGATGATGGTAGG+AGG | - | chr1_3:74278702-74278721 | Msa0140130:CDS | 40.0% |
!!! | TTTTTGATGATGGTAGGAGG+AGG | - | chr1_3:74278705-74278724 | Msa0140130:CDS | 40.0% |
ACAACTAACCGAGAAATCGA+TGG | - | chr1_3:74278995-74279014 | Msa0140130:CDS | 40.0% | |
CAACTAACCGAGAAATCGAT+GGG | - | chr1_3:74278996-74279015 | Msa0140130:CDS | 40.0% | |
!! | GTATTTGCCCATCGATTTCT+CGG | + | chr1_3:74279006-74279025 | None:intergenic | 40.0% |
!!! | TTGAGCGTGTGTTGATTTTC+AGG | - | chr1_3:74279177-74279196 | Msa0140130:CDS | 40.0% |
GTCAAAGAAAACCACCATAC+CGG | + | chr1_3:74279256-74279275 | None:intergenic | 40.0% | |
TCAGAACACATAATGCCAAC+AGG | + | chr1_3:74279278-74279297 | None:intergenic | 40.0% | |
TCTGAACCTCGCTTTATCTT+TGG | - | chr1_3:74279293-74279312 | Msa0140130:CDS | 40.0% | |
AGTTCTCCAAAGATAAAGCG+AGG | + | chr1_3:74279302-74279321 | None:intergenic | 40.0% | |
! | CTAGCAATTAGTTCTTGTGC+TGG | + | chr1_3:74279605-74279624 | None:intergenic | 40.0% |
CAGCACAAGAACTAATTGCT+AGG | - | chr1_3:74279603-74279622 | Msa0140130:CDS | 40.0% | |
!! | TAGGATTCTCCAGTTTTGAC+AGG | - | chr1_3:74279842-74279861 | Msa0140130:intron | 40.0% |
!! | AGGATTCTCCAGTTTTGACA+GGG | - | chr1_3:74279843-74279862 | Msa0140130:intron | 40.0% |
GTAAGACCTTGAGGAAACTA+AGG | - | chr1_3:74279874-74279893 | Msa0140130:intron | 40.0% | |
! | AAAGTGCCTTAGTTTCCTCA+AGG | + | chr1_3:74279883-74279902 | None:intergenic | 40.0% |
!! | AAAAGTATTGCTAAGCGCCT+CGG | - | chr1_3:74280115-74280134 | Msa0140130:intron | 40.0% |
CATTGTAGTTCGCAATTGCA+TGG | + | chr1_3:74280205-74280224 | None:intergenic | 40.0% | |
TTTAACAATGGGAGCTAACC+TGG | + | chr1_3:74280316-74280335 | None:intergenic | 40.0% | |
! | TTTGATGGTTTGGGCATGTA+TGG | - | chr1_3:74280355-74280374 | Msa0140130:intron | 40.0% |
AGAAGACCTTATACACACCA+AGG | - | chr1_3:74280378-74280397 | Msa0140130:intron | 40.0% | |
! | CCTATTCCTTGGTGTGTATA+AGG | + | chr1_3:74280387-74280406 | None:intergenic | 40.0% |
CCTTATACACACCAAGGAAT+AGG | - | chr1_3:74280384-74280403 | Msa0140130:intron | 40.0% | |
ATCTAGTATGCCCTATTCCT+TGG | + | chr1_3:74280398-74280417 | None:intergenic | 40.0% | |
ACTAGACTTGTGCCATACTA+TGG | - | chr1_3:74280500-74280519 | Msa0140130:intron | 40.0% | |
AGCCGGATTCATAATGAGAA+AGG | - | chr1_3:74280540-74280559 | Msa0140130:intron | 40.0% | |
AAATCTTGGACACTCGTGAT+AGG | + | chr1_3:74280650-74280669 | None:intergenic | 40.0% | |
TATCACGAGTGTCCAAGATT+TGG | - | chr1_3:74280649-74280668 | Msa0140130:intron | 40.0% | |
ATCACGAGTGTCCAAGATTT+GGG | - | chr1_3:74280650-74280669 | Msa0140130:intron | 40.0% | |
AACAGGAGTTTCCCAAATCT+TGG | + | chr1_3:74280664-74280683 | None:intergenic | 40.0% | |
AAAAACGATGGCTACTGTTG+GGG | + | chr1_3:74280855-74280874 | None:intergenic | 40.0% | |
CAAAAACGATGGCTACTGTT+GGG | + | chr1_3:74280856-74280875 | None:intergenic | 40.0% | |
ACAAAAACGATGGCTACTGT+TGG | + | chr1_3:74280857-74280876 | None:intergenic | 40.0% | |
!! | GTAGCCATCGTTTTTGTATG+AGG | - | chr1_3:74280860-74280879 | Msa0140130:intron | 40.0% |
AGCTCCTCATACAAAAACGA+TGG | + | chr1_3:74280867-74280886 | None:intergenic | 40.0% | |
! | CACAATCCATGGTTCAAGTT+TGG | + | chr1_3:74280900-74280919 | None:intergenic | 40.0% |
TTCTGTTGTGGCAGAAAGAA+TGG | + | chr1_3:74281086-74281105 | None:intergenic | 40.0% | |
! | TGTTGCTTGCATGTCATTTC+AGG | - | chr1_3:74281231-74281250 | Msa0140130:intron | 40.0% |
!!! | GTTGTAAGAAGGTGTCGTTT+TGG | + | chr1_3:74281261-74281280 | None:intergenic | 40.0% |
AAACGACACCTTCTTACAAC+AGG | - | chr1_3:74281261-74281280 | Msa0140130:intron | 40.0% | |
! | GAGATTCCGTGCTTTTCATA+TGG | - | chr1_3:74281322-74281341 | Msa0140130:intron | 40.0% |
ACGGTAGCCAAAAGAGAAAA+AGG | + | chr1_3:74281357-74281376 | None:intergenic | 40.0% | |
ATTAATGTCCAGCTCTCAAG+GGG | + | chr1_3:74281385-74281404 | None:intergenic | 40.0% | |
GAATTAATGTCCAGCTCTCA+AGG | + | chr1_3:74281387-74281406 | None:intergenic | 40.0% | |
! | GATGATGGCATTACAGTTTG+CGG | + | chr1_3:74281488-74281507 | None:intergenic | 40.0% |
TCCAGTGATAGTATGCACAT+TGG | - | chr1_3:74281515-74281534 | Msa0140130:intron | 40.0% | |
TCCAATGTGCATACTATCAC+TGG | + | chr1_3:74281519-74281538 | None:intergenic | 40.0% | |
TCAGACAACATTGACAACCT+TGG | + | chr1_3:74281602-74281621 | None:intergenic | 40.0% | |
TGACAGTTTATATCATGGGC+AGG | - | chr1_3:74281666-74281685 | Msa0140130:CDS | 40.0% | |
GACAGTTTATATCATGGGCA+GGG | - | chr1_3:74281667-74281686 | Msa0140130:CDS | 40.0% | |
AGTGGTATGACAAACTCAGA+TGG | + | chr1_3:74281698-74281717 | None:intergenic | 40.0% | |
GCTGTAGTGTTGTCAAATAG+CGG | - | chr1_3:74281867-74281886 | Msa0140130:intron | 40.0% | |
TTGCCGATCGCATAAAATAG+CGG | + | chr1_3:74281992-74282011 | None:intergenic | 40.0% | |
GGCAATTGATATGTGAGAGA+AGG | - | chr1_3:74282007-74282026 | Msa0140130:CDS | 40.0% | |
TAAGTGATCTGGATGCTGTT+CGG | - | chr1_3:74282129-74282148 | Msa0140130:intron | 40.0% | |
GTTACATGCTTACGTTTCAG+AGG | - | chr1_3:74282371-74282390 | Msa0140130:intron | 40.0% | |
AATTCCCAACCTTCATGCAT+CGG | - | chr1_3:74282426-74282445 | Msa0140130:intron | 40.0% | |
GGATTAGGTCAATGCTTTCA+AGG | + | chr1_3:74282470-74282489 | None:intergenic | 40.0% | |
!! | GGAAACAATGACGGATACAT+TGG | + | chr1_3:74283050-74283069 | None:intergenic | 40.0% |
AATCTGAGGGGAAACAATGA+CGG | + | chr1_3:74283059-74283078 | None:intergenic | 40.0% | |
CATGTCCAAAACATAGAGAC+AGG | - | chr1_3:74283383-74283402 | Msa0140130:intron | 40.0% | |
TATCTACTGGCATAGACACT+TGG | - | chr1_3:74283459-74283478 | Msa0140130:intron | 40.0% | |
ATCTACTGGCATAGACACTT+GGG | - | chr1_3:74283460-74283479 | Msa0140130:intron | 40.0% | |
TACTTATGCTATACACCCTC+CGG | - | chr1_3:74283664-74283683 | Msa0140130:intron | 40.0% | |
TGCTTATAATAGTGACCGGA+GGG | + | chr1_3:74283682-74283701 | None:intergenic | 40.0% | |
TTGCTTATAATAGTGACCGG+AGG | + | chr1_3:74283683-74283702 | None:intergenic | 40.0% | |
AATTAAGCACATACACCCTC+CGG | + | chr1_3:74283815-74283834 | None:intergenic | 40.0% | |
AAGACCCTCAAAATAACCAC+AGG | + | chr1_3:74283905-74283924 | None:intergenic | 40.0% | |
AAGCAACAACTGCTCTAATG+TGG | - | chr1_3:74283974-74283993 | Msa0140130:intron | 40.0% | |
CTCAATTCCCTAAGCTTTCA+AGG | - | chr1_3:74284024-74284043 | Msa0140130:intron | 40.0% | |
AGACTCGATCCAACTTTACT+CGG | - | chr1_3:74284075-74284094 | Msa0140130:intron | 40.0% | |
TGATCATTCCCGAGTAAAGT+TGG | + | chr1_3:74284087-74284106 | None:intergenic | 40.0% | |
TCAACAATACCAAGCCATGT+TGG | - | chr1_3:74284110-74284129 | Msa0140130:intron | 40.0% | |
ATATCTCATGAGGCCACAAA+TGG | - | chr1_3:74284164-74284183 | Msa0140130:CDS | 40.0% | |
TTGTGGCTGCATCATATTAG+AGG | + | chr1_3:74284286-74284305 | None:intergenic | 40.0% | |
!! | GTAAGTACTTGGGTTTGTTG+TGG | + | chr1_3:74284303-74284322 | None:intergenic | 40.0% |
! | TGGATTGTTGTTGTCTCTGA+TGG | + | chr1_3:74284437-74284456 | None:intergenic | 40.0% |
!!! | GGTTTTGAATATGACGGTGA+CGG | + | chr1_3:74284465-74284484 | None:intergenic | 40.0% |
! | TTTGGAGTCCATGATTGTTG+TGG | + | chr1_3:74284636-74284655 | None:intergenic | 40.0% |
CAATCATGGACTCCAAAGTA+TGG | - | chr1_3:74284639-74284658 | Msa0140130:intron | 40.0% | |
AATATGCAGGTCAATGCCTT+TGG | - | chr1_3:74284663-74284682 | Msa0140130:intron | 40.0% | |
TGCCCAAAATCATGTTCTCT+CGG | - | chr1_3:74284755-74284774 | Msa0140130:CDS | 40.0% | |
! | ACCCGAGAGAACATGATTTT+GGG | + | chr1_3:74284760-74284779 | None:intergenic | 40.0% |
!! | GGTGTCAATATCGATTCATC+TGG | - | chr1_3:74284777-74284796 | Msa0140130:CDS | 40.0% |
ACTGGTGCATCAACACAATT+AGG | - | chr1_3:74284849-74284868 | Msa0140130:intron | 40.0% | |
CTGGTGCATCAACACAATTA+GGG | - | chr1_3:74284850-74284869 | Msa0140130:intron | 40.0% | |
TGGTGCATCAACACAATTAG+GGG | - | chr1_3:74284851-74284870 | Msa0140130:intron | 40.0% | |
TGAAGATGAATCTTGCATGC+AGG | + | chr1_3:74284904-74284923 | None:intergenic | 40.0% | |
!!! | ATGTTGGGTTCTGGTTTTGT+GGG | + | chr1_3:74284953-74284972 | None:intergenic | 40.0% |
!!! | AATGTTGGGTTCTGGTTTTG+TGG | + | chr1_3:74284954-74284973 | None:intergenic | 40.0% |
CCTTTACAAATGTTGGGTTC+TGG | + | chr1_3:74284962-74284981 | None:intergenic | 40.0% | |
CCAGAACCCAACATTTGTAA+AGG | - | chr1_3:74284959-74284978 | Msa0140130:CDS | 40.0% | |
TTTACAAATCGGGATCGGTT+GGG | - | chr1_3:74285060-74285079 | Msa0140130:CDS | 40.0% | |
! | GGGTCAAATGTTTGGAATTG+AGG | - | chr1_3:74285136-74285155 | Msa0140130:intron | 40.0% |
TTAGAAGACCCTCTTAGATC+AGG | - | chr1_3:74285164-74285183 | Msa0140130:intron | 40.0% | |
AAATTCAGCGAAAGTCTTGG+TGG | + | chr1_3:74285272-74285291 | None:intergenic | 40.0% | |
ACCGGAAGATATTCAGAAGA+TGG | - | chr1_3:74285402-74285421 | Msa0140130:five_prime_UTR | 40.0% | |
CCCATCTTCTGAATATCTTC+CGG | + | chr1_3:74285406-74285425 | None:intergenic | 40.0% | |
CCGGAAGATATTCAGAAGAT+GGG | - | chr1_3:74285403-74285422 | Msa0140130:five_prime_UTR | 40.0% | |
TATTCAGAAGATGGGAGATC+AGG | - | chr1_3:74285411-74285430 | Msa0140130:five_prime_UTR | 40.0% | |
GAATCTCACCACATTGTTTC+TGG | - | chr1_3:74285484-74285503 | Msa0140130:five_prime_UTR | 40.0% | |
TAATCAAGTGAGCCAATCGA+TGG | + | chr1_3:74285517-74285536 | None:intergenic | 40.0% | |
GATTCCCAAATGTAACCTTC+AGG | - | chr1_3:74285550-74285569 | Msa0140130:five_prime_UTR | 40.0% | |
GGAACCTGAAGGTTACATTT+GGG | + | chr1_3:74285557-74285576 | None:intergenic | 40.0% | |
TGGAACCTGAAGGTTACATT+TGG | + | chr1_3:74285558-74285577 | None:intergenic | 40.0% | |
! | AATGTAACCTTCAGGTTCCA+CGG | - | chr1_3:74285558-74285577 | Msa0140130:five_prime_UTR | 40.0% |
CAAAGAAATTGTCTTGACCG+TGG | + | chr1_3:74285578-74285597 | None:intergenic | 40.0% | |
GCTTGTACTTGTGTACTCTA+AGG | - | chr1_3:74285797-74285816 | Msa0140130:five_prime_UTR | 40.0% | |
! | TGTACTTGTGTACTCTAAGG+AGG | - | chr1_3:74285800-74285819 | Msa0140130:five_prime_UTR | 40.0% |
GAAGTTGGAACATTCAAAGG+AGG | + | chr1_3:74285871-74285890 | None:intergenic | 40.0% | |
CGGTCTCAATCGATAGTGAT+AGG | - | chr1_3:74278016-74278035 | Msa0140130:three_prime_UTR | 45.0% | |
!! | AACTGGGTCATGCTGTTTCT+GGG | - | chr1_3:74278130-74278149 | Msa0140130:three_prime_UTR | 45.0% |
GAGTGGTAGAGTTAGTGCAT+TGG | - | chr1_3:74278310-74278329 | Msa0140130:CDS | 45.0% | |
GAAGCTTTCAACATCAGGGT+TGG | - | chr1_3:74278502-74278521 | Msa0140130:intron | 45.0% | |
GGTGGCAAACTAGGGTAATT+TGG | + | chr1_3:74279028-74279047 | None:intergenic | 45.0% | |
TGAAGTTGGCAAACCAACTG+AGG | + | chr1_3:74279049-74279068 | None:intergenic | 45.0% | |
! | GGTGGTTTTCTTTGACCTGT+TGG | - | chr1_3:74279260-74279279 | Msa0140130:CDS | 45.0% |
ATGGATGTAGGAAGAGCAGA+AGG | - | chr1_3:74279341-74279360 | Msa0140130:CDS | 45.0% | |
CTTGGAATGCCCAATTCCAT+AGG | + | chr1_3:74279378-74279397 | None:intergenic | 45.0% | |
GTATGAACATTACCAGCGGA+GGG | + | chr1_3:74279500-74279519 | None:intergenic | 45.0% | |
AGTATGAACATTACCAGCGG+AGG | + | chr1_3:74279501-74279520 | None:intergenic | 45.0% | |
! | GCAATTAGTTCTTGTGCTGG+TGG | + | chr1_3:74279602-74279621 | None:intergenic | 45.0% |
GGGATCTCCATGATGTTGAA+TGG | - | chr1_3:74279624-74279643 | Msa0140130:CDS | 45.0% | |
CTTTAGTAGTCAGTGCTGTC+TGG | - | chr1_3:74279899-74279918 | Msa0140130:intron | 45.0% | |
!! | AAAGTATTGCTAAGCGCCTC+GGG | - | chr1_3:74280116-74280135 | Msa0140130:intron | 45.0% |
! | TGTTTTGCATTATGGACCCG+AGG | + | chr1_3:74280135-74280154 | None:intergenic | 45.0% |
ATATAACTAGAGAGCGGCCA+AGG | - | chr1_3:74280429-74280448 | Msa0140130:intron | 45.0% | |
AGCGGCCAAGGAAAACAATT+AGG | - | chr1_3:74280441-74280460 | Msa0140130:intron | 45.0% | |
AGCTGGGCAATTCCATAGTA+TGG | + | chr1_3:74280515-74280534 | None:intergenic | 45.0% | |
TGTGAAGAAGGGACTTCGAT+TGG | - | chr1_3:74280582-74280601 | Msa0140130:intron | 45.0% | |
ACAGTTCAGAGTTCGAAGGT+TGG | + | chr1_3:74280832-74280851 | None:intergenic | 45.0% | |
AGTGCTAAGAGACTTGTAGC+TGG | - | chr1_3:74281300-74281319 | Msa0140130:intron | 45.0% | |
TCACTGGACAGAACAGATGA+TGG | + | chr1_3:74281503-74281522 | None:intergenic | 45.0% | |
TTTCTGTTGGTATGCGCTTC+AGG | - | chr1_3:74281753-74281772 | Msa0140130:intron | 45.0% | |
CTGATGTCTACATGTACCTG+CGG | + | chr1_3:74281808-74281827 | None:intergenic | 45.0% | |
CGCATATCACGGAACAATAG+TGG | + | chr1_3:74281905-74281924 | None:intergenic | 45.0% | |
AGGTACATGGGCACAATAAC+AGG | - | chr1_3:74282104-74282123 | Msa0140130:intron | 45.0% | |
! | ACAGAGCGCCAATGAGAATT+CGG | + | chr1_3:74282158-74282177 | None:intergenic | 45.0% |
TAGGCACAGTCAACAGAACA+AGG | + | chr1_3:74282294-74282313 | None:intergenic | 45.0% | |
! | TGTTCTGTTGACTGTGCCTA+AGG | - | chr1_3:74282294-74282313 | Msa0140130:CDS | 45.0% |
GATACCGATGCATGAAGGTT+GGG | + | chr1_3:74282433-74282452 | None:intergenic | 45.0% | |
AGATACCGATGCATGAAGGT+TGG | + | chr1_3:74282434-74282453 | None:intergenic | 45.0% | |
AAGCAGATACCGATGCATGA+AGG | + | chr1_3:74282438-74282457 | None:intergenic | 45.0% | |
! | CCTGAAATGACGTTGACTGA+AGG | + | chr1_3:74282525-74282544 | None:intergenic | 45.0% |
CCTTCAGTCAACGTCATTTC+AGG | - | chr1_3:74282522-74282541 | Msa0140130:CDS | 45.0% | |
! | TCTGCTGTGAATAGGTTGGA+TGG | - | chr1_3:74282955-74282974 | Msa0140130:intron | 45.0% |
! | CTGCTGTGAATAGGTTGGAT+GGG | - | chr1_3:74282956-74282975 | Msa0140130:intron | 45.0% |
ATTTCCCATAATGACACCCG+TGG | + | chr1_3:74283008-74283027 | None:intergenic | 45.0% | |
CATGGACGTTTCAATCTGAG+GGG | + | chr1_3:74283071-74283090 | None:intergenic | 45.0% | |
CCATGGACGTTTCAATCTGA+GGG | + | chr1_3:74283072-74283091 | None:intergenic | 45.0% | |
TAGACACTTGGGAGACTAGT+TGG | - | chr1_3:74283471-74283490 | Msa0140130:intron | 45.0% | |
! | AGACACTTGGGAGACTAGTT+GGG | - | chr1_3:74283472-74283491 | Msa0140130:intron | 45.0% |
TTGCTTATACTAGTGACCGG+AGG | - | chr1_3:74283796-74283815 | Msa0140130:intron | 45.0% | |
TGCTTATACTAGTGACCGGA+GGG | - | chr1_3:74283797-74283816 | Msa0140130:intron | 45.0% | |
ATGACCCCTAAGACACTGTT+TGG | + | chr1_3:74283849-74283868 | None:intergenic | 45.0% | |
!!! | CCACAGGTTTTTTTGGGAAG+AGG | + | chr1_3:74283889-74283908 | None:intergenic | 45.0% |
CCTCTTCCCAAAAAAACCTG+TGG | - | chr1_3:74283886-74283905 | Msa0140130:intron | 45.0% | |
ACTGCTCTAATGTGGATGAG+AGG | - | chr1_3:74283982-74284001 | Msa0140130:intron | 45.0% | |
AGCTTAGGGAATTGAGACCT+TGG | + | chr1_3:74284020-74284039 | None:intergenic | 45.0% | |
ACCAGCACCTTGAAAGCTTA+GGG | + | chr1_3:74284034-74284053 | None:intergenic | 45.0% | |
TACCAGCACCTTGAAAGCTT+AGG | + | chr1_3:74284035-74284054 | None:intergenic | 45.0% | |
GACTCGATCCAACTTTACTC+GGG | - | chr1_3:74284076-74284095 | Msa0140130:intron | 45.0% | |
!! | TGGGTAGTGGATATCTCATG+AGG | - | chr1_3:74284154-74284173 | Msa0140130:CDS | 45.0% |
!! | CCTGATTGAAGGTAATGGGT+AGG | + | chr1_3:74284207-74284226 | None:intergenic | 45.0% |
CCTACCCATTACCTTCAATC+AGG | - | chr1_3:74284204-74284223 | Msa0140130:intron | 45.0% | |
! | CATGTTGCTGTTGTTGAGCT+TGG | + | chr1_3:74284377-74284396 | None:intergenic | 45.0% |
AGAGATTGCCAGTTCCTTCA+GGG | + | chr1_3:74284560-74284579 | None:intergenic | 45.0% | |
AAGAGATTGCCAGTTCCTTC+AGG | + | chr1_3:74284561-74284580 | None:intergenic | 45.0% | |
CTATCGAGTCTAACGAGAAG+TGG | - | chr1_3:74284585-74284604 | Msa0140130:intron | 45.0% | |
GCATCTGAATCACAATGTGG+AGG | + | chr1_3:74284738-74284757 | None:intergenic | 45.0% | |
TGGGCATCTGAATCACAATG+TGG | + | chr1_3:74284741-74284760 | None:intergenic | 45.0% | |
GCCCAAAATCATGTTCTCTC+GGG | - | chr1_3:74284756-74284775 | Msa0140130:CDS | 45.0% | |
! | CACCCGAGAGAACATGATTT+TGG | + | chr1_3:74284761-74284780 | None:intergenic | 45.0% |
ACTGCTTCAACAACTGACAC+TGG | - | chr1_3:74284831-74284850 | Msa0140130:intron | 45.0% | |
TCAACACAATTAGGGGAGTC+TGG | - | chr1_3:74284858-74284877 | Msa0140130:intron | 45.0% | |
GTTTACAAATCGGGATCGGT+TGG | - | chr1_3:74285059-74285078 | Msa0140130:CDS | 45.0% | |
GAGGAGTTGGGTCAAATGTT+TGG | - | chr1_3:74285128-74285147 | Msa0140130:intron | 45.0% | |
GAGAATGATGTGCTTCTCCT+TGG | - | chr1_3:74285212-74285231 | Msa0140130:intron | 45.0% | |
GAAACCGATACTTACTCCCA+CGG | + | chr1_3:74285245-74285264 | None:intergenic | 45.0% | |
CGCAAATTCAGCGAAAGTCT+TGG | + | chr1_3:74285275-74285294 | None:intergenic | 45.0% | |
GTGGTTGTCCAGAAACAATG+TGG | + | chr1_3:74285495-74285514 | None:intergenic | 45.0% | |
!!! | AAATTAATTTTTTAGTTAAA+TGG | - | chr1_3:74283256-74283275 | Msa0140130:intron | 5.0% |
!!! | TTATTATTAATTATTTTCTT+TGG | - | chr1_3:74285602-74285621 | Msa0140130:five_prime_UTR | 5.0% |
!!! | TATTATTAATTATTTTCTTT+GGG | - | chr1_3:74285603-74285622 | Msa0140130:five_prime_UTR | 5.0% |
! | CTATCGATTGAGACCGAGTG+AGG | + | chr1_3:74278012-74278031 | None:intergenic | 50.0% |
TCGTGCAGGTTAAGTCCAAC+TGG | - | chr1_3:74278113-74278132 | Msa0140130:three_prime_UTR | 50.0% | |
CGTGCAGGTTAAGTCCAACT+GGG | - | chr1_3:74278114-74278133 | Msa0140130:three_prime_UTR | 50.0% | |
CAGAAACAGCATGACCCAGT+TGG | + | chr1_3:74278131-74278150 | None:intergenic | 50.0% | |
!! | CAACTGGGTCATGCTGTTTC+TGG | - | chr1_3:74278129-74278148 | Msa0140130:three_prime_UTR | 50.0% |
!! | TTGATGATGGTAGGAGGAGG+AGG | - | chr1_3:74278708-74278727 | Msa0140130:CDS | 50.0% |
!! | TGATGATGGTAGGAGGAGGA+GGG | - | chr1_3:74278709-74278728 | Msa0140130:CDS | 50.0% |
TGAGCTATGGCATGCATGTG+CGG | - | chr1_3:74278752-74278771 | Msa0140130:intron | 50.0% | |
!! | GCAGTTGGTAGGGACACTAA+GGG | + | chr1_3:74278780-74278799 | None:intergenic | 50.0% |
!! | TGCAGTTGGTAGGGACACTA+AGG | + | chr1_3:74278781-74278800 | None:intergenic | 50.0% |
TTAGTGTCCCTACCAACTGC+AGG | - | chr1_3:74278780-74278799 | Msa0140130:intron | 50.0% | |
! | ACGAGTTCCTGCAGTTGGTA+GGG | + | chr1_3:74278790-74278809 | None:intergenic | 50.0% |
TCGTGTGGTTTACTTCCCTC+AGG | - | chr1_3:74278806-74278825 | Msa0140130:intron | 50.0% | |
CGTGTGGTTTACTTCCCTCA+GGG | - | chr1_3:74278807-74278826 | Msa0140130:intron | 50.0% | |
! | GGTTAGTTGTAGCAGACACC+TGG | + | chr1_3:74278985-74279004 | None:intergenic | 50.0% |
CCAACTGAGGTGGCAAACTA+GGG | + | chr1_3:74279036-74279055 | None:intergenic | 50.0% | |
ACCAACTGAGGTGGCAAACT+AGG | + | chr1_3:74279037-74279056 | None:intergenic | 50.0% | |
AGTTGGCAAACCAACTGAGG+TGG | + | chr1_3:74279046-74279065 | None:intergenic | 50.0% | |
!! | GACACTACAGCCATTGACTC+CGG | - | chr1_3:74279234-74279253 | Msa0140130:CDS | 50.0% |
!! | TACAGCCATTGACTCCGGTA+TGG | - | chr1_3:74279239-74279258 | Msa0140130:CDS | 50.0% |
AACCACCATACCGGAGTCAA+TGG | + | chr1_3:74279247-74279266 | None:intergenic | 50.0% | |
AGAGAATCCTCCATGTGTGC+TGG | + | chr1_3:74279448-74279467 | None:intergenic | 50.0% | |
! | TGAGAAAGTTTTCCCTCCGC+TGG | - | chr1_3:74279485-74279504 | Msa0140130:CDS | 50.0% |
AATTGCCCAGCTCATGTAGC+CGG | - | chr1_3:74280523-74280542 | Msa0140130:intron | 50.0% | |
TGAATCCGGCTACATGAGCT+GGG | + | chr1_3:74280531-74280550 | None:intergenic | 50.0% | |
ATGAATCCGGCTACATGAGC+TGG | + | chr1_3:74280532-74280551 | None:intergenic | 50.0% | |
! | ACCATGGATTGTGACCGTGA+CGG | - | chr1_3:74280907-74280926 | Msa0140130:intron | 50.0% |
TTCCTTTCAGCCAACCGTCA+CGG | + | chr1_3:74280924-74280943 | None:intergenic | 50.0% | |
GACACCTTCTTACAACAGGC+TGG | - | chr1_3:74281265-74281284 | Msa0140130:intron | 50.0% | |
TGCTCCAGCCTGTTGTAAGA+AGG | + | chr1_3:74281272-74281291 | None:intergenic | 50.0% | |
CAGCTCTCAAGGGGAAGAAA+CGG | + | chr1_3:74281376-74281395 | None:intergenic | 50.0% | |
CATTACAGTTTGCGGTCGAC+TGG | + | chr1_3:74281480-74281499 | None:intergenic | 50.0% | |
AGTTGCTGAAGCATGAGCAG+CGG | + | chr1_3:74281552-74281571 | None:intergenic | 50.0% | |
CTATAGCAGCGCTAGCATAG+CGG | - | chr1_3:74281954-74281973 | Msa0140130:intron | 50.0% | |
TTCGGTGGCCGAATTCTCAT+TGG | - | chr1_3:74282147-74282166 | Msa0140130:intron | 50.0% | |
TTCTCATTGGCGCTCTGTCA+AGG | - | chr1_3:74282160-74282179 | Msa0140130:intron | 50.0% | |
! | TCTGTTGACTGTGCCTAAGG+AGG | - | chr1_3:74282297-74282316 | Msa0140130:CDS | 50.0% |
GGATGGGATGAATCAACAGC+AGG | - | chr1_3:74282972-74282991 | Msa0140130:intron | 50.0% | |
!! | ACAGCCACGGGTGTCATTAT+GGG | - | chr1_3:74283001-74283020 | Msa0140130:intron | 50.0% |
CCCTCAGATTGAAACGTCCA+TGG | - | chr1_3:74283069-74283088 | Msa0140130:intron | 50.0% | |
GCCATGGACGTTTCAATCTG+AGG | + | chr1_3:74283073-74283092 | None:intergenic | 50.0% | |
TTGAAACGTCCATGGCATCC+TGG | - | chr1_3:74283077-74283096 | Msa0140130:intron | 50.0% | |
AAGAGCTGTCACAGAGCTTC+TGG | + | chr1_3:74283551-74283570 | None:intergenic | 50.0% | |
GCTCTAATGTGGATGAGAGG+TGG | - | chr1_3:74283985-74284004 | Msa0140130:intron | 50.0% | |
TCCCTAAGCTTTCAAGGTGC+TGG | - | chr1_3:74284030-74284049 | Msa0140130:intron | 50.0% | |
AGCAGCTGGAATGCAGAACA+TGG | - | chr1_3:74284134-74284153 | Msa0140130:CDS | 50.0% | |
GCAGCTGGAATGCAGAACAT+GGG | - | chr1_3:74284135-74284154 | Msa0140130:CDS | 50.0% | |
GGAATGCAGAACATGGGTAG+TGG | - | chr1_3:74284141-74284160 | Msa0140130:CDS | 50.0% | |
TGTGGCTGGTGAAGTTGCAA+AGG | + | chr1_3:74284243-74284262 | None:intergenic | 50.0% | |
!! | TCTGAAGAAGGTGCTGAGAC+AGG | + | chr1_3:74284332-74284351 | None:intergenic | 50.0% |
! | ATATGACGGTGACGGCACAT+TGG | + | chr1_3:74284457-74284476 | None:intergenic | 50.0% |
GTTTCCTGCTTCAGTTCCCT+CGG | - | chr1_3:74284509-74284528 | Msa0140130:intron | 50.0% | |
TTTCCTGCTTCAGTTCCCTC+GGG | - | chr1_3:74284510-74284529 | Msa0140130:intron | 50.0% | |
! | CCAAGCATGTTTTGTCCCGA+GGG | + | chr1_3:74284528-74284547 | None:intergenic | 50.0% |
CCTCGGGACAAAACATGCTT+GGG | - | chr1_3:74284526-74284545 | Msa0140130:intron | 50.0% | |
ATGTGACATTGCGCTGCCAA+AGG | + | chr1_3:74284682-74284701 | None:intergenic | 50.0% | |
TGTAATTCGGGACAGTGGTG+GGG | + | chr1_3:74284812-74284831 | None:intergenic | 50.0% | |
GTGTAATTCGGGACAGTGGT+GGG | + | chr1_3:74284813-74284832 | None:intergenic | 50.0% | |
AGTGTAATTCGGGACAGTGG+TGG | + | chr1_3:74284814-74284833 | None:intergenic | 50.0% | |
AGCAGTGTAATTCGGGACAG+TGG | + | chr1_3:74284817-74284836 | None:intergenic | 50.0% | |
ATTAGGGGAGTCTGGATTCC+AGG | - | chr1_3:74284866-74284885 | Msa0140130:intron | 50.0% | |
TTAGGGGAGTCTGGATTCCA+GGG | - | chr1_3:74284867-74284886 | Msa0140130:intron | 50.0% | |
TGCAGGCATATAGAGAACCC+TGG | + | chr1_3:74284887-74284906 | None:intergenic | 50.0% | |
GGCGTTCACTTGACATCTCT+CGG | - | chr1_3:74285081-74285100 | Msa0140130:intron | 50.0% | |
AAGACCCTCTTAGATCAGGC+TGG | - | chr1_3:74285168-74285187 | Msa0140130:intron | 50.0% | |
! | GGAGAAGCACATCATTCTCC+CGG | + | chr1_3:74285211-74285230 | None:intergenic | 50.0% |
CGATCCGTGGGAGTAAGTAT+CGG | - | chr1_3:74285238-74285257 | Msa0140130:intron | 50.0% | |
TCAGAAGATGGGAGATCAGG+CGG | - | chr1_3:74285414-74285433 | Msa0140130:five_prime_UTR | 50.0% | |
GATCAGGCGGTAGAAATGCA+TGG | - | chr1_3:74285427-74285446 | Msa0140130:five_prime_UTR | 50.0% | |
GCGGTAGAAATGCATGGACT+AGG | - | chr1_3:74285433-74285452 | Msa0140130:five_prime_UTR | 50.0% | |
!! | GAAATGCATGGACTAGGCTC+AGG | - | chr1_3:74285439-74285458 | Msa0140130:five_prime_UTR | 50.0% |
!! | ATGGACTAGGCTCAGGACAA+AGG | - | chr1_3:74285446-74285465 | Msa0140130:five_prime_UTR | 50.0% |
GGCTCAGGACAAAGGCTTAA+TGG | - | chr1_3:74285454-74285473 | Msa0140130:five_prime_UTR | 50.0% | |
GGACAAAGGCTTAATGGCAC+TGG | - | chr1_3:74285460-74285479 | Msa0140130:five_prime_UTR | 50.0% | |
TCTGGACAACCACCATCGAT+TGG | - | chr1_3:74285502-74285521 | Msa0140130:five_prime_UTR | 50.0% | |
TCAAGTGAGCCAATCGATGG+TGG | + | chr1_3:74285514-74285533 | None:intergenic | 50.0% | |
! | GAACAACGTGTCACTCGTGC+AGG | - | chr1_3:74278099-74278118 | Msa0140130:three_prime_UTR | 55.0% |
AACATCAGGGTTGGGTCAGC+AGG | - | chr1_3:74278511-74278530 | Msa0140130:intron | 55.0% | |
ACATCAGGGTTGGGTCAGCA+GGG | - | chr1_3:74278512-74278531 | Msa0140130:intron | 55.0% | |
TTGGGTCAGCAGGGACATGA+AGG | - | chr1_3:74278521-74278540 | Msa0140130:intron | 55.0% | |
! | GATGATGGTAGGAGGAGGAG+GGG | - | chr1_3:74278710-74278729 | Msa0140130:CDS | 55.0% |
GAGCTATGGCATGCATGTGC+GGG | - | chr1_3:74278753-74278772 | Msa0140130:intron | 55.0% | |
AGCTATGGCATGCATGTGCG+GGG | - | chr1_3:74278754-74278773 | Msa0140130:intron | 55.0% | |
CACGAGTTCCTGCAGTTGGT+AGG | + | chr1_3:74278791-74278810 | None:intergenic | 55.0% | |
ACCAACTGCAGGAACTCGTG+TGG | - | chr1_3:74278791-74278810 | Msa0140130:intron | 55.0% | |
ACCACACGAGTTCCTGCAGT+TGG | + | chr1_3:74278795-74278814 | None:intergenic | 55.0% | |
CCTGCTCACTATGACCCTGA+GGG | + | chr1_3:74278824-74278843 | None:intergenic | 55.0% | |
ACCTGCTCACTATGACCCTG+AGG | + | chr1_3:74278825-74278844 | None:intergenic | 55.0% | |
! | CCCTAGTTTGCCACCTCAGT+TGG | - | chr1_3:74279033-74279052 | Msa0140130:CDS | 55.0% |
!! | AGCCATTGACTCCGGTATGG+TGG | - | chr1_3:74279242-74279261 | Msa0140130:CDS | 55.0% |
TAGTTCGAGGGCTGCTTGCT+TGG | + | chr1_3:74279396-74279415 | None:intergenic | 55.0% | |
!! | TCCATGTGTGCTGGTGTCAC+TGG | + | chr1_3:74279439-74279458 | None:intergenic | 55.0% |
AGTGACACCAGCACACATGG+AGG | - | chr1_3:74279438-74279457 | Msa0140130:CDS | 55.0% | |
GGGGACAGTTCAGAGTTCGA+AGG | + | chr1_3:74280836-74280855 | None:intergenic | 55.0% | |
ACCGTCACGGTCACAATCCA+TGG | + | chr1_3:74280911-74280930 | None:intergenic | 55.0% | |
TGGATTGTGACCGTGACGGT+TGG | - | chr1_3:74280911-74280930 | Msa0140130:intron | 55.0% | |
CGTTTCTTCCCCTTGAGAGC+TGG | - | chr1_3:74281374-74281393 | Msa0140130:intron | 55.0% | |
CTGAAGAGTCAAGTGTCCGC+AGG | - | chr1_3:74281789-74281808 | Msa0140130:intron | 55.0% | |
GTGATCTGGATGCTGTTCGG+TGG | - | chr1_3:74282132-74282151 | Msa0140130:intron | 55.0% | |
!! | GACAGCCACGGGTGTCATTA+TGG | - | chr1_3:74283000-74283019 | Msa0140130:intron | 55.0% |
! | CCAAGCAAAGATGAGGTGCC+AGG | + | chr1_3:74283098-74283117 | None:intergenic | 55.0% |
CCTGGCACCTCATCTTTGCT+TGG | - | chr1_3:74283095-74283114 | Msa0140130:intron | 55.0% | |
AGAGGTGGAACTGCAGACCA+AGG | - | chr1_3:74284000-74284019 | Msa0140130:intron | 55.0% | |
!! | AAGGTGCTGGTATGTTGCCC+TGG | - | chr1_3:74284043-74284062 | Msa0140130:intron | 55.0% |
TCGAGTCTCTGCTGCATCCA+GGG | + | chr1_3:74284063-74284082 | None:intergenic | 55.0% | |
ATCGAGTCTCTGCTGCATCC+AGG | + | chr1_3:74284064-74284083 | None:intergenic | 55.0% | |
CATTCCAGCTGCTGCCAACA+TGG | + | chr1_3:74284127-74284146 | None:intergenic | 55.0% | |
CCCTCGGGACAAAACATGCT+TGG | - | chr1_3:74284525-74284544 | Msa0140130:intron | 55.0% | |
! | CCCAAGCATGTTTTGTCCCG+AGG | + | chr1_3:74284529-74284548 | None:intergenic | 55.0% |
TCGCTTTGCCCTGAAGGAAC+TGG | - | chr1_3:74284549-74284568 | Msa0140130:CDS | 55.0% | |
GCTGCCAGCCTGATCTAAGA+GGG | + | chr1_3:74285175-74285194 | None:intergenic | 55.0% | |
AGCTGCCAGCCTGATCTAAG+AGG | + | chr1_3:74285176-74285195 | None:intergenic | 55.0% | |
GTCTTGACCGTGGAACCTGA+AGG | + | chr1_3:74285568-74285587 | None:intergenic | 55.0% | |
CCCTCAGGGTCATAGTGAGC+AGG | - | chr1_3:74278821-74278840 | Msa0140130:CDS | 60.0% | |
GCCAGTGACACCAGCACACA+TGG | - | chr1_3:74279435-74279454 | Msa0140130:CDS | 60.0% | |
ACTTTCTCAGCTGCGCGACG+AGG | + | chr1_3:74279474-74279493 | None:intergenic | 60.0% | |
! | GACCGTGACGGTTGGCTGAA+AGG | - | chr1_3:74280919-74280938 | Msa0140130:intron | 60.0% |
ACTGTGCCTAAGGAGGAGCG+CGG | - | chr1_3:74282304-74282323 | Msa0140130:CDS | 60.0% | |
CAGCAGGAGAGAGACAGCCA+CGG | - | chr1_3:74282988-74283007 | Msa0140130:intron | 60.0% | |
AGCAGGAGAGAGACAGCCAC+GGG | - | chr1_3:74282989-74283008 | Msa0140130:intron | 60.0% | |
! | GATGAGGTGCCAGGATGCCA+TGG | + | chr1_3:74283089-74283108 | None:intergenic | 60.0% |
CAGCTGCTGCCAACATGGCT+TGG | + | chr1_3:74284122-74284141 | None:intergenic | 60.0% | |
CAAGCCATGTTGGCAGCAGC+TGG | - | chr1_3:74284120-74284139 | Msa0140130:intron | 60.0% | |
TGTCCCGAGGGAACTGAAGC+AGG | + | chr1_3:74284516-74284535 | None:intergenic | 60.0% | |
! | CTTGGGTCGCTTTGCCCTGA+AGG | - | chr1_3:74284543-74284562 | Msa0140130:intron | 60.0% |
CTGCTATCGTGAGCTGCGAG+AGG | - | chr1_3:74285109-74285128 | Msa0140130:intron | 60.0% | |
TCGTGAGCTGCGAGAGGAGT+TGG | - | chr1_3:74285115-74285134 | Msa0140130:intron | 60.0% | |
CGTGAGCTGCGAGAGGAGTT+GGG | - | chr1_3:74285116-74285135 | Msa0140130:intron | 60.0% | |
GGCAGCTTGTGTTCGTCGAC+CGG | - | chr1_3:74285189-74285208 | Msa0140130:intron | 60.0% | |
GCAGCTTGTGTTCGTCGACC+GGG | - | chr1_3:74285190-74285209 | Msa0140130:intron | 60.0% | |
TTCTCCTTGGCGACGATCCG+TGG | - | chr1_3:74285225-74285244 | Msa0140130:intron | 60.0% | |
TCTCCTTGGCGACGATCCGT+GGG | - | chr1_3:74285226-74285245 | Msa0140130:intron | 60.0% | |
GGAAGACCGCGCTCCTCCTT+AGG | + | chr1_3:74282313-74282332 | None:intergenic | 65.0% | |
ACTCCCACGGATCGTCGCCA+AGG | + | chr1_3:74285232-74285251 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_3 | gene | 74277884 | 74285917 | 74277884 | ID=Msa0140130;Name=Msa0140130 |
chr1_3 | mRNA | 74277884 | 74285917 | 74277884 | ID=Msa0140130-mRNA-1;Parent=Msa0140130;Name=Msa0140130-mRNA-1;_AED=0.05;_eAED=0.05;_QI=616|1|1|1|1|1|14|377|850 |
chr1_3 | exon | 74277884 | 74278438 | 74277884 | ID=Msa0140130-mRNA-1:exon:25807;Parent=Msa0140130-mRNA-1 |
chr1_3 | exon | 74278552 | 74278742 | 74278552 | ID=Msa0140130-mRNA-1:exon:25806;Parent=Msa0140130-mRNA-1 |
chr1_3 | exon | 74278821 | 74279839 | 74278821 | ID=Msa0140130-mRNA-1:exon:25805;Parent=Msa0140130-mRNA-1 |
chr1_3 | exon | 74280685 | 74280832 | 74280685 | ID=Msa0140130-mRNA-1:exon:25804;Parent=Msa0140130-mRNA-1 |
chr1_3 | exon | 74281620 | 74281695 | 74281620 | ID=Msa0140130-mRNA-1:exon:25803;Parent=Msa0140130-mRNA-1 |
chr1_3 | exon | 74281991 | 74282113 | 74281991 | ID=Msa0140130-mRNA-1:exon:25802;Parent=Msa0140130-mRNA-1 |
chr1_3 | exon | 74282198 | 74282362 | 74282198 | ID=Msa0140130-mRNA-1:exon:25801;Parent=Msa0140130-mRNA-1 |
chr1_3 | exon | 74282458 | 74282548 | 74282458 | ID=Msa0140130-mRNA-1:exon:25800;Parent=Msa0140130-mRNA-1 |
chr1_3 | exon | 74284133 | 74284217 | 74284133 | ID=Msa0140130-mRNA-1:exon:25799;Parent=Msa0140130-mRNA-1 |
chr1_3 | exon | 74284295 | 74284450 | 74284295 | ID=Msa0140130-mRNA-1:exon:25798;Parent=Msa0140130-mRNA-1 |
chr1_3 | exon | 74284546 | 74284602 | 74284546 | ID=Msa0140130-mRNA-1:exon:25797;Parent=Msa0140130-mRNA-1 |
chr1_3 | exon | 74284717 | 74284815 | 74284717 | ID=Msa0140130-mRNA-1:exon:25796;Parent=Msa0140130-mRNA-1 |
chr1_3 | exon | 74284959 | 74285080 | 74284959 | ID=Msa0140130-mRNA-1:exon:25795;Parent=Msa0140130-mRNA-1 |
chr1_3 | exon | 74285259 | 74285917 | 74285259 | ID=Msa0140130-mRNA-1:exon:25794;Parent=Msa0140130-mRNA-1 |
chr1_3 | five_prime_UTR | 74285302 | 74285917 | 74285302 | ID=Msa0140130-mRNA-1:five_prime_utr;Parent=Msa0140130-mRNA-1 |
chr1_3 | CDS | 74285259 | 74285301 | 74285259 | ID=Msa0140130-mRNA-1:cds;Parent=Msa0140130-mRNA-1 |
chr1_3 | CDS | 74284959 | 74285080 | 74284959 | ID=Msa0140130-mRNA-1:cds;Parent=Msa0140130-mRNA-1 |
chr1_3 | CDS | 74284717 | 74284815 | 74284717 | ID=Msa0140130-mRNA-1:cds;Parent=Msa0140130-mRNA-1 |
chr1_3 | CDS | 74284546 | 74284602 | 74284546 | ID=Msa0140130-mRNA-1:cds;Parent=Msa0140130-mRNA-1 |
chr1_3 | CDS | 74284295 | 74284450 | 74284295 | ID=Msa0140130-mRNA-1:cds;Parent=Msa0140130-mRNA-1 |
chr1_3 | CDS | 74284133 | 74284217 | 74284133 | ID=Msa0140130-mRNA-1:cds;Parent=Msa0140130-mRNA-1 |
chr1_3 | CDS | 74282458 | 74282548 | 74282458 | ID=Msa0140130-mRNA-1:cds;Parent=Msa0140130-mRNA-1 |
chr1_3 | CDS | 74282198 | 74282362 | 74282198 | ID=Msa0140130-mRNA-1:cds;Parent=Msa0140130-mRNA-1 |
chr1_3 | CDS | 74281991 | 74282113 | 74281991 | ID=Msa0140130-mRNA-1:cds;Parent=Msa0140130-mRNA-1 |
chr1_3 | CDS | 74281620 | 74281695 | 74281620 | ID=Msa0140130-mRNA-1:cds;Parent=Msa0140130-mRNA-1 |
chr1_3 | CDS | 74280685 | 74280832 | 74280685 | ID=Msa0140130-mRNA-1:cds;Parent=Msa0140130-mRNA-1 |
chr1_3 | CDS | 74278821 | 74279839 | 74278821 | ID=Msa0140130-mRNA-1:cds;Parent=Msa0140130-mRNA-1 |
chr1_3 | CDS | 74278552 | 74278742 | 74278552 | ID=Msa0140130-mRNA-1:cds;Parent=Msa0140130-mRNA-1 |
chr1_3 | CDS | 74278261 | 74278438 | 74278261 | ID=Msa0140130-mRNA-1:cds;Parent=Msa0140130-mRNA-1 |
chr1_3 | three_prime_UTR | 74277884 | 74278260 | 74277884 | ID=Msa0140130-mRNA-1:three_prime_utr;Parent=Msa0140130-mRNA-1 |
Gene Sequence |
Protein sequence |