AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0075530


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0075530 MtrunA17_Chr1g0184201 92.188 640 18 1 1 608 1 640 0.0 1164
Msa0075530 MtrunA17_Chr6g0482501 28.571 546 313 12 88 604 25 522 2.29e-49 179
Msa0075530 MtrunA17_Chr5g0409391 47.561 82 42 1 116 197 33 113 4.02e-17 78.2
Msa0075530 MtrunA17_Chr6g0482481 40.909 88 50 1 519 604 92 179 2.72e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0075530 AT2G31270.1 52.830 212 82 3 410 606 352 560 7.56e-57 201
Msa0075530 AT2G31270.1 51.389 216 89 4 39 245 41 249 8.91e-49 179
Msa0075530 AT3G54710.1 50.311 161 77 3 87 247 27 184 2.05e-43 162
Msa0075530 AT3G54710.1 42.205 263 110 8 384 607 218 477 1.26e-40 154

Find 141 sgRNAs with CRISPR-Local

Find 237 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTTGCAGGTATGAGAATT+TGG 0.208186 1_2:+50958334 Msa0075530:intron
AGTGATGCTCTTAAGGATTC+AGG 0.231310 1_2:-50960673 None:intergenic
ATTAGATTGTTGCGATTAAA+AGG 0.237039 1_2:+50958386 Msa0075530:CDS
TCAGTTAAAGTTTCAATCTT+TGG 0.243781 1_2:-50958437 None:intergenic
TGAGTGAAGAAGAAGAATTT+TGG 0.250730 1_2:-50957807 None:intergenic
TGGGTGAATGTAAGAGAAAT+TGG 0.259359 1_2:-50957787 None:intergenic
ACTTTCATATTGGTATATTT+AGG 0.260467 1_2:+50960814 Msa0075530:three_prime_UTR
TGTTGCAGGTATGAGAATTT+GGG 0.273987 1_2:+50958335 Msa0075530:intron
TCCATTCTTAATTAATTTCA+TGG 0.281488 1_2:-50960901 None:intergenic
AAGCGCAACGCCGCGGTTGC+GGG 0.283254 1_2:-50958001 None:intergenic
GTGCGCGACTCAATGAGTTT+TGG 0.299833 1_2:+50958752 Msa0075530:CDS
GCTAAGTTGTTGTCTGAATC+TGG 0.304619 1_2:+50958703 Msa0075530:CDS
TTCTTCAAGTGATGCTCTTA+AGG 0.317807 1_2:-50960680 None:intergenic
GAGAGGCAACTGCCGGCTTC+TGG 0.332877 1_2:-50959514 None:intergenic
CGGCGTTGCGCTTTCGATAT+CGG 0.348179 1_2:+50958011 Msa0075530:CDS
GGGTGAATGTAAGAGAAATT+GGG 0.355405 1_2:-50957786 None:intergenic
TCTGCAACAAGAAACATTTC+CGG 0.356727 1_2:-50960924 None:intergenic
GAGGTTTACCCATGCTCATT+TGG 0.363872 1_2:+50958555 Msa0075530:CDS
GGTTTGATCTACTTTCATAT+TGG 0.365309 1_2:+50960804 Msa0075530:three_prime_UTR
GCATCAAACTCAACTGCATC+AGG 0.365765 1_2:-50958682 None:intergenic
GAAGCACATCCTGCGCTTCA+TGG 0.367874 1_2:+50959719 Msa0075530:CDS
ATATTTAGGAGAGGTAAAAT+TGG 0.373592 1_2:+50960828 Msa0075530:three_prime_UTR
CGCAGGATGTGCTTCACTAC+TGG 0.375185 1_2:-50959711 None:intergenic
AGCTGGTAGAGTTGTCGTCT+GGG 0.393195 1_2:-50959934 None:intergenic
AGATTGAAACTTTAACTGAT+AGG 0.395153 1_2:+50958441 Msa0075530:CDS
GAGCTGGTAGAGTTGTCGTC+TGG 0.402340 1_2:-50959935 None:intergenic
CTCAAGCTTGACTCTGAAAC+AGG 0.405661 1_2:-50959629 None:intergenic
AAAGCGCAACGCCGCGGTTG+CGG 0.415732 1_2:-50958002 None:intergenic
TTTGCTTTCTGTATACTCAA+TGG 0.428293 1_2:-50959795 None:intergenic
ACCGAATGGAGAAGATTATC+CGG 0.434254 1_2:-50960076 None:intergenic
CGCCTTCTCAGAAATCCATT+CGG 0.435905 1_2:-50960510 None:intergenic
TGAATCATGTTAAAGAGCTT+AGG 0.436584 1_2:-50960276 None:intergenic
CCCGGATAATCTTCTCCATT+CGG 0.449170 1_2:+50960075 Msa0075530:CDS
GTTAAAGAGCTTAGGGAGGC+TGG 0.452098 1_2:-50960268 None:intergenic
GTAGCTGACATCAGCCTGGC+TGG 0.454247 1_2:-50959875 None:intergenic
GCCTTCTCAGAAATCCATTC+GGG 0.459518 1_2:-50960509 None:intergenic
CAATGAAATGACGTCGTTGA+AGG 0.463806 1_2:+50958080 Msa0075530:CDS
ACATGACTTTCTGAGTTAGC+AGG 0.467209 1_2:-50959455 None:intergenic
GGCTCAGGCAGCATTTCCTC+TGG 0.468683 1_2:-50959317 None:intergenic
TTGCGGGTTCGCATCGGTGG+TGG 0.469410 1_2:-50957985 None:intergenic
AAGAATAGCAATGGAGGAAA+GGG 0.469721 1_2:+50960203 Msa0075530:CDS
ACCATGAAATTAATTAAGAA+TGG 0.469813 1_2:+50960900 Msa0075530:three_prime_UTR
TGAAGGGAAAATCTGCTAGA+AGG 0.477915 1_2:+50958097 Msa0075530:CDS
GTGATGCTCTTAAGGATTCA+GGG 0.478740 1_2:-50960672 None:intergenic
GAGTATACAGAAAGCAAAGA+TGG 0.479585 1_2:+50959800 Msa0075530:CDS
TCATGCTTTGGACGACTGAA+TGG 0.481298 1_2:-50959338 None:intergenic
AAAGAATAGCAATGGAGGAA+AGG 0.482688 1_2:+50960202 Msa0075530:CDS
GGAGTAGATACAAATTTAGC+TGG 0.483928 1_2:-50959854 None:intergenic
GAATCATGTTAAAGAGCTTA+GGG 0.484737 1_2:-50960275 None:intergenic
CTGAGAAAACCGCCTTCTGA+AGG 0.492237 1_2:-50959549 None:intergenic
AACCAACTTGTCCGGCGAGC+TGG 0.493098 1_2:-50959951 None:intergenic
TGTACAAGAGGATCATGCTT+TGG 0.499528 1_2:-50959350 None:intergenic
TTTATACTAACATGAAGATC+CGG 0.500484 1_2:-50958658 None:intergenic
CCGCGGTTGCGGGTTCGCAT+CGG 0.503017 1_2:-50957991 None:intergenic
TTAAGCGCCCACCTCGTTCA+AGG 0.503396 1_2:+50959972 Msa0075530:CDS
GATTGCTATTAAGAAGTTGT+TGG 0.505832 1_2:+50958606 Msa0075530:CDS
TTCTTAGCTTGTGAGATAGC+TGG 0.511965 1_2:-50960228 None:intergenic
TAAAATATCGCCATCTGAGT+TGG 0.516325 1_2:+50959676 Msa0075530:CDS
GCTTCAGCTGATGTCTCAGC+AGG 0.517698 1_2:-50959485 None:intergenic
CTAAGTTGTTGTCTGAATCT+GGG 0.523632 1_2:+50958704 Msa0075530:CDS
GTTGCAGGTATGAGAATTTG+GGG 0.525927 1_2:+50958336 Msa0075530:intron
TTCTTAATAGCAATCGCCTC+AGG 0.526378 1_2:-50958598 None:intergenic
AATGAAATGACGTCGTTGAA+GGG 0.529956 1_2:+50958081 Msa0075530:CDS
AAAAGAAAGAATAGCAATGG+AGG 0.531135 1_2:+50960197 Msa0075530:CDS
AGGTGTAGCTAGTGTAACTC+TGG 0.532203 1_2:-50959765 None:intergenic
AATCCATGCTTACTGACTGC+TGG 0.534347 1_2:+50960949 Msa0075530:three_prime_UTR
CCGTTCTGTTATCACAAAAG+AGG 0.537384 1_2:+50960320 Msa0075530:CDS
TTTGGATCTGGTGTTGTGTG+AGG 0.537780 1_2:-50957878 None:intergenic
TGAAGAAGCAAAATGAGTAA+AGG 0.538290 1_2:+50960696 Msa0075530:exon
TTATTAGGGTTTAATAGCGC+GGG 0.539220 1_2:-50957751 None:intergenic
TCCCGAATGGATTTCTGAGA+AGG 0.541497 1_2:+50960508 Msa0075530:CDS
GAAATTAATTAAGAATGGAC+CGG 0.542580 1_2:+50960905 Msa0075530:three_prime_UTR
TTTGGACGACTGAATGGCTC+AGG 0.542814 1_2:-50959332 None:intergenic
TCAACTGTGCCAAATGAGCA+TGG 0.543850 1_2:-50958564 None:intergenic
GGGCGCTTAACCAACTTGTC+CGG 0.545875 1_2:-50959959 None:intergenic
CGAGACTAGCATATCTCCAC+TGG 0.546554 1_2:-50960537 None:intergenic
TACCAGCTCGCCGGACAAGT+TGG 0.547251 1_2:+50959949 Msa0075530:CDS
GGATATTAGAAAAGTTGCTA+AGG 0.548634 1_2:+50958032 Msa0075530:CDS
GATGATTCATTGCTCTTCCG+AGG 0.549354 1_2:-50958138 None:intergenic
CGGTTGCGGGTTCGCATCGG+TGG 0.552701 1_2:-50957988 None:intergenic
CCGAATGGAGAAGATTATCC+GGG 0.552846 1_2:-50960075 None:intergenic
TTCATATCCATGTAAAACAA+AGG 0.559207 1_2:+50960984 Msa0075530:three_prime_UTR
GGCATAAGAGAGGCAACTGC+CGG 0.559596 1_2:-50959521 None:intergenic
TAACCAGCAGTCAGTAAGCA+TGG 0.562965 1_2:-50960952 None:intergenic
TGCCTCAATCCTTCAGAAGG+CGG 0.563769 1_2:+50959540 Msa0075530:CDS
TGTTAGAATTAGTTCCCGAA+TGG 0.564240 1_2:+50960495 Msa0075530:CDS
GGTGAATGTAAGAGAAATTG+GGG 0.565693 1_2:-50957785 None:intergenic
AGAAGCAAAATGAGTAAAGG+AGG 0.566110 1_2:+50960699 Msa0075530:exon
TCAATGACCTTGAACGAGGT+GGG 0.568176 1_2:-50959979 None:intergenic
TCTGAAGAACCATGAAGCGC+AGG 0.570831 1_2:-50959728 None:intergenic
AAACAGGCACAACTGAGGGT+TGG 0.574849 1_2:-50959613 None:intergenic
TTCAATGACCTTGAACGAGG+TGG 0.577604 1_2:-50959980 None:intergenic
AAATCACATTGGCTTCTCCT+CGG 0.580298 1_2:+50958121 Msa0075530:CDS
TCTGAGAAGGCGGCCTCCAG+TGG 0.580751 1_2:+50960521 Msa0075530:CDS
AACCGCCTTCTGAAGGATTG+AGG 0.583856 1_2:-50959542 None:intergenic
CATATTGGTATATTTAGGAG+AGG 0.584678 1_2:+50960819 Msa0075530:three_prime_UTR
TCTGAAACAGGCACAACTGA+GGG 0.587099 1_2:-50959617 None:intergenic
GATATTAGAAAAGTTGCTAA+GGG 0.589889 1_2:+50958033 Msa0075530:CDS
TTATGCCTCAATCCTTCAGA+AGG 0.598089 1_2:+50959537 Msa0075530:CDS
CGACAACTCTACCAGCTCGC+CGG 0.599025 1_2:+50959940 Msa0075530:CDS
AATTTGTATCTACTCCAGCC+AGG 0.603332 1_2:+50959861 Msa0075530:CDS
CTATCTCACAAGCTAAGAAG+CGG 0.603356 1_2:+50960232 Msa0075530:CDS
TGCTAGAAGGCAAATCACAT+TGG 0.603766 1_2:+50958110 Msa0075530:CDS
CATGACTTTCTGAGTTAGCA+GGG 0.605336 1_2:-50959454 None:intergenic
TGGAGTTGACATAGCATCAA+CGG 0.606325 1_2:-50959834 None:intergenic
AGTATACAGAAAGCAAAGAT+GGG 0.606980 1_2:+50959801 Msa0075530:CDS
AGGTGTAGCTGACATCAGCC+TGG 0.607269 1_2:-50959879 None:intergenic
TTTATTAGGGTTTAATAGCG+CGG 0.607539 1_2:-50957752 None:intergenic
GGTTTCATCATGTGTACAAG+AGG 0.610647 1_2:-50959362 None:intergenic
CATCAAACTCAACTGCATCA+GGG 0.610741 1_2:-50958681 None:intergenic
ACACTATCATACCTCTGGGT+GGG 0.612575 1_2:-50958779 None:intergenic
CAACTGTGCCAAATGAGCAT+GGG 0.612717 1_2:-50958563 None:intergenic
GCGAACGAGTTGTATGAAGC+CGG 0.612998 1_2:+50958639 Msa0075530:CDS
CTCTGAAACAGGCACAACTG+AGG 0.615353 1_2:-50959618 None:intergenic
TTCACTGCAGAGAATGATGA+GGG 0.616272 1_2:-50959386 None:intergenic
CCGATGCGAACCCGCAACCG+CGG 0.620178 1_2:+50957991 Msa0075530:CDS
CGAATGGATTTCTGAGAAGG+CGG 0.621345 1_2:+50960511 Msa0075530:CDS
GATTCTGTAACCAACTCAGA+TGG 0.624141 1_2:-50959686 None:intergenic
TACTTCTATCAACAATATCA+CGG 0.628510 1_2:-50960371 None:intergenic
TTTCACTGCAGAGAATGATG+AGG 0.630337 1_2:-50959387 None:intergenic
CACACTATCATACCTCTGGG+TGG 0.639190 1_2:-50958780 None:intergenic
GTAGCTAGTGTAACTCTGGA+TGG 0.641322 1_2:-50959761 None:intergenic
GCTGGTAGAGTTGTCGTCTG+GGG 0.645341 1_2:-50959933 None:intergenic
TGGATTGAAACAGATTGAAG+TGG 0.649528 1_2:-50959593 None:intergenic
CTGTTTCAGAGTCAAGCTTG+AGG 0.653446 1_2:+50959630 Msa0075530:CDS
AATTTCAATGACCTTGAACG+AGG 0.653533 1_2:-50959983 None:intergenic
TTGCAGGTATGAGAATTTGG+GGG 0.655048 1_2:+50958337 Msa0075530:intron
GACTAGCATATCTCCACTGG+AGG 0.665848 1_2:-50960534 None:intergenic
ACGTGCTTCTAGTGACATTG+CGG 0.666388 1_2:+50959421 Msa0075530:CDS
ACTGCAGAGAATGATGAGGG+AGG 0.673341 1_2:-50959383 None:intergenic
GAGGATAAATTCCACCTCTG+AGG 0.675454 1_2:+50959649 Msa0075530:CDS
AGTAGATCAAACCAACTACA+CGG 0.677064 1_2:-50960794 None:intergenic
AATCTGGGACTATGTCTCTG+AGG 0.683217 1_2:+50958719 Msa0075530:CDS
ATAGGCTGATGAAGTTCCAG+AGG 0.688686 1_2:+50959301 Msa0075530:intron
GTGTTGTGTGAGGATTGTGA+AGG 0.688886 1_2:-50957868 None:intergenic
ATATCGAAAGCGCAACGCCG+CGG 0.697463 1_2:-50958008 None:intergenic
GAAGGATTGAGGCATAAGAG+AGG 0.703019 1_2:-50959531 None:intergenic
AATGGAGAAGATTATCCGGG+AGG 0.714359 1_2:-50960072 None:intergenic
TCATGTTAAAGAGCTTAGGG+AGG 0.717982 1_2:-50960272 None:intergenic
TTCTATCAACAATATCACGG+TGG 0.721589 1_2:-50960368 None:intergenic
GTGAATGTAAGAGAAATTGG+GGG 0.824620 1_2:-50957784 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTGTTGATTTATTTTA+TGG + chr1_2:50958304-50958323 Msa0075530:intron 10.0%
!!! TTTTTGTTGATTTATTTTAT+GGG + chr1_2:50958305-50958324 Msa0075530:intron 10.0%
!!! TTTTTCAAAAATTTGTATTT+AGG + chr1_2:50958495-50958514 Msa0075530:intron 10.0%
!! AATAATATGCAATTTCTAAA+AGG - chr1_2:50959259-50959278 None:intergenic 15.0%
!! TCACTCATAAAAATAAATAA+AGG - chr1_2:50960141-50960160 None:intergenic 15.0%
!!! AGTATATTGTTTTTTTCTTT+TGG + chr1_2:50960733-50960752 Msa0075530:three_prime_UTR 15.0%
!!! GTATATTGTTTTTTTCTTTT+GGG + chr1_2:50960734-50960753 Msa0075530:three_prime_UTR 15.0%
!!! ATTTTGAATTTTCAGATCTA+GGG + chr1_2:50958182-50958201 Msa0075530:intron 20.0%
!!! TTTTTATGATTTGTTTGATG+TGG + chr1_2:50958224-50958243 Msa0075530:intron 20.0%
!!! TCTTAAGCATTTTGAAATTT+TGG + chr1_2:50958257-50958276 Msa0075530:intron 20.0%
!!! TAGTTTTGCATTTTATTTGT+GGG + chr1_2:50958908-50958927 Msa0075530:intron 20.0%
!! ATATAATCAATACAATGACA+GGG - chr1_2:50960615-50960634 None:intergenic 20.0%
!! AATATAATCAATACAATGAC+AGG - chr1_2:50960616-50960635 None:intergenic 20.0%
!! ACTTTCATATTGGTATATTT+AGG + chr1_2:50960814-50960833 Msa0075530:three_prime_UTR 20.0%
!! ACCATGAAATTAATTAAGAA+TGG + chr1_2:50960900-50960919 Msa0075530:three_prime_UTR 20.0%
!! TCCATTCTTAATTAATTTCA+TGG - chr1_2:50960904-50960923 None:intergenic 20.0%
! GATATTAGAAAAGTTGCTAA+GGG + chr1_2:50958033-50958052 Msa0075530:CDS 25.0%
!!! ATTCAAAATGCTTACTTTTC+AGG - chr1_2:50958171-50958190 None:intergenic 25.0%
!! CATTTTGAATTTTCAGATCT+AGG + chr1_2:50958181-50958200 Msa0075530:intron 25.0%
!!! CATTTTGAAATTTTGGATCT+AGG + chr1_2:50958264-50958283 Msa0075530:intron 25.0%
!! AAATTTTGGATCTAGGTTTT+TGG + chr1_2:50958271-50958290 Msa0075530:intron 25.0%
! ATTAGATTGTTGCGATTAAA+AGG + chr1_2:50958386-50958405 Msa0075530:CDS 25.0%
! TCAGTTAAAGTTTCAATCTT+TGG - chr1_2:50958440-50958459 None:intergenic 25.0%
! AGATTGAAACTTTAACTGAT+AGG + chr1_2:50958441-50958460 Msa0075530:CDS 25.0%
!!! TAGGATTTTTTTTCTGATTG+TGG + chr1_2:50958514-50958533 Msa0075530:intron 25.0%
!!! TTTTTTTCTGATTGTGGTTT+TGG + chr1_2:50958520-50958539 Msa0075530:intron 25.0%
! TTTATACTAACATGAAGATC+CGG - chr1_2:50958661-50958680 None:intergenic 25.0%
!! TTGATATTTCATTTTGCTTG+TGG + chr1_2:50958858-50958877 Msa0075530:intron 25.0%
!!! CTAGTTTTGCATTTTATTTG+TGG + chr1_2:50958907-50958926 Msa0075530:intron 25.0%
! TATCCACTTATTATGTTGAT+TGG + chr1_2:50958946-50958965 Msa0075530:intron 25.0%
! AAACCAATCAACATAATAAG+TGG - chr1_2:50958952-50958971 None:intergenic 25.0%
!! ACTTATTATGTTGATTGGTT+TGG + chr1_2:50958951-50958970 Msa0075530:intron 25.0%
! TAATGCTAATTCTGAGTAAA+AGG + chr1_2:50959103-50959122 Msa0075530:intron 25.0%
! TGAAAGTAACTTAAAGTCTA+AGG + chr1_2:50959163-50959182 Msa0075530:intron 25.0%
!! CTAAAGATGCTTTTATGTAT+AGG + chr1_2:50959283-50959302 Msa0075530:intron 25.0%
!!! GCATCATTTTCATTTTTCAT+AGG - chr1_2:50960016-50960035 None:intergenic 25.0%
! ATGAAAAATGAAAATGATGC+TGG + chr1_2:50960016-50960035 Msa0075530:CDS 25.0%
! TACTTCTATCAACAATATCA+CGG - chr1_2:50960374-50960393 None:intergenic 25.0%
! TCTCTATGAAACATAATTGA+CGG + chr1_2:50960401-50960420 Msa0075530:intron 25.0%
! TGGAATTGTAAATTCATAAC+AGG - chr1_2:50960588-50960607 None:intergenic 25.0%
! ATATTTAGGAGAGGTAAAAT+TGG + chr1_2:50960828-50960847 Msa0075530:three_prime_UTR 25.0%
!! GTAGATCAACTCATATTTTT+GGG + chr1_2:50960850-50960869 Msa0075530:three_prime_UTR 25.0%
! GAAATTAATTAAGAATGGAC+CGG + chr1_2:50960905-50960924 Msa0075530:three_prime_UTR 25.0%
!! TGTTTTACATGGATATGAAA+AGG - chr1_2:50960983-50961002 None:intergenic 25.0%
! TTCATATCCATGTAAAACAA+AGG + chr1_2:50960984-50961003 Msa0075530:three_prime_UTR 25.0%
!!! CTATTTTCCTTTGTTTTACA+TGG - chr1_2:50960994-50961013 None:intergenic 25.0%
TTTATTAGGGTTTAATAGCG+CGG - chr1_2:50957755-50957774 None:intergenic 30.0%
!! GGGGTGGATTTTATTTATTA+GGG - chr1_2:50957768-50957787 None:intergenic 30.0%
! GAGTGAAGAAGAAGAATTTT+GGG - chr1_2:50957809-50957828 None:intergenic 30.0%
! TGAGTGAAGAAGAAGAATTT+TGG - chr1_2:50957810-50957829 None:intergenic 30.0%
! TGAAGAAGTTTTCATGGTTA+TGG - chr1_2:50957842-50957861 None:intergenic 30.0%
!! AGTTTCTGAAGAAGTTTTCA+TGG - chr1_2:50957848-50957867 None:intergenic 30.0%
!!! GTTTTTGAGGTTAGTTCAAT+TGG - chr1_2:50957943-50957962 None:intergenic 30.0%
GGATATTAGAAAAGTTGCTA+AGG + chr1_2:50958032-50958051 Msa0075530:CDS 30.0%
!! ATTTTCAGATCTAGGGTTTT+TGG + chr1_2:50958189-50958208 Msa0075530:intron 30.0%
!!! TTATGGGTTTTTTTTGTTGC+AGG + chr1_2:50958321-50958340 Msa0075530:intron 30.0%
!!! GTTGAAGTTTATTTTACCTG+AGG + chr1_2:50958582-50958601 Msa0075530:CDS 30.0%
! GATTGCTATTAAGAAGTTGT+TGG + chr1_2:50958606-50958625 Msa0075530:CDS 30.0%
! TTGTCACTATGAGATTTTGA+TGG + chr1_2:50959038-50959057 Msa0075530:intron 30.0%
!!! TAACTTTTGATGATGAGTTG+AGG + chr1_2:50959210-50959229 Msa0075530:intron 30.0%
TTTGCTTTCTGTATACTCAA+TGG - chr1_2:50959798-50959817 None:intergenic 30.0%
AGTATACAGAAAGCAAAGAT+GGG + chr1_2:50959801-50959820 Msa0075530:CDS 30.0%
! GTCATAAAACTTCTTTTAGG+TGG - chr1_2:50959914-50959933 None:intergenic 30.0%
AAAAATGAAAATGATGCTGG+CGG + chr1_2:50960019-50960038 Msa0075530:CDS 30.0%
GGAAAAAGAAAGAATAGCAA+TGG + chr1_2:50960194-50960213 Msa0075530:CDS 30.0%
AAAAGAAAGAATAGCAATGG+AGG + chr1_2:50960197-50960216 Msa0075530:CDS 30.0%
GAATCATGTTAAAGAGCTTA+GGG - chr1_2:50960278-50960297 None:intergenic 30.0%
TGAATCATGTTAAAGAGCTT+AGG - chr1_2:50960279-50960298 None:intergenic 30.0%
CTCTATGAAACATAATTGAC+GGG + chr1_2:50960402-50960421 Msa0075530:intron 30.0%
AACTTCACCTAAGAAAACAA+GGG - chr1_2:50960456-50960475 None:intergenic 30.0%
TGAAGAAGCAAAATGAGTAA+AGG + chr1_2:50960696-50960715 Msa0075530:exon 30.0%
GGTTTGATCTACTTTCATAT+TGG + chr1_2:50960804-50960823 Msa0075530:three_prime_UTR 30.0%
CATATTGGTATATTTAGGAG+AGG + chr1_2:50960819-50960838 Msa0075530:three_prime_UTR 30.0%
! GGTAGATCAACTCATATTTT+TGG + chr1_2:50960849-50960868 Msa0075530:three_prime_UTR 30.0%
!!! AACTCATATTTTTGGGCAAA+TGG + chr1_2:50960857-50960876 Msa0075530:three_prime_UTR 30.0%
!! GGGGGTGGATTTTATTTATT+AGG - chr1_2:50957769-50957788 None:intergenic 35.0%
GTGAATGTAAGAGAAATTGG+GGG - chr1_2:50957787-50957806 None:intergenic 35.0%
GGTGAATGTAAGAGAAATTG+GGG - chr1_2:50957788-50957807 None:intergenic 35.0%
GGGTGAATGTAAGAGAAATT+GGG - chr1_2:50957789-50957808 None:intergenic 35.0%
TGGGTGAATGTAAGAGAAAT+TGG - chr1_2:50957790-50957809 None:intergenic 35.0%
!!! AAGATTGGGTTTTTTGGATC+TGG - chr1_2:50957893-50957912 None:intergenic 35.0%
! GATTTTGAGCTACGAAGATT+GGG - chr1_2:50957907-50957926 None:intergenic 35.0%
! AGATTTTGAGCTACGAAGAT+TGG - chr1_2:50957908-50957927 None:intergenic 35.0%
!!! TGATTTTTCTGGGGTTTTTG+AGG - chr1_2:50957956-50957975 None:intergenic 35.0%
AAAAACCCCAGAAAAATCAC+TGG + chr1_2:50957957-50957976 Msa0075530:CDS 35.0%
AATGAAATGACGTCGTTGAA+GGG + chr1_2:50958081-50958100 Msa0075530:CDS 35.0%
TTGTTGCAGGTATGAGAATT+TGG + chr1_2:50958334-50958353 Msa0075530:intron 35.0%
TGTTGCAGGTATGAGAATTT+GGG + chr1_2:50958335-50958354 Msa0075530:intron 35.0%
!!! GTGGTTTTGGATGAGTTTTT+AGG + chr1_2:50958533-50958552 Msa0075530:intron 35.0%
!! GTTTTGGATGAGTTTTTAGG+AGG + chr1_2:50958536-50958555 Msa0075530:intron 35.0%
CTAAGTTGTTGTCTGAATCT+GGG + chr1_2:50958704-50958723 Msa0075530:CDS 35.0%
GTTTGGTAGAAAGAATAGTC+AGG + chr1_2:50958968-50958987 Msa0075530:intron 35.0%
! GCGGTTTTCTCAGAAATTAA+AGG + chr1_2:50959559-50959578 Msa0075530:CDS 35.0%
TGGATTGAAACAGATTGAAG+TGG - chr1_2:50959596-50959615 None:intergenic 35.0%
! ACTCAGATGGCGATATTTTA+GGG - chr1_2:50959676-50959695 None:intergenic 35.0%
! AACTCAGATGGCGATATTTT+AGG - chr1_2:50959677-50959696 None:intergenic 35.0%
TAAAATATCGCCATCTGAGT+TGG + chr1_2:50959676-50959695 Msa0075530:CDS 35.0%
!! GTATACTCAATGGTTTTGCT+AGG - chr1_2:50959788-50959807 None:intergenic 35.0%
GAGTATACAGAAAGCAAAGA+TGG + chr1_2:50959800-50959819 Msa0075530:CDS 35.0%
GGAGTAGATACAAATTTAGC+TGG - chr1_2:50959857-50959876 None:intergenic 35.0%
! GGGGTCATAAAACTTCTTTT+AGG - chr1_2:50959917-50959936 None:intergenic 35.0%
AATTTCAATGACCTTGAACG+AGG - chr1_2:50959986-50960005 None:intergenic 35.0%
! TGACATTTTTGATATCCTCC+CGG + chr1_2:50960057-50960076 Msa0075530:CDS 35.0%
! AAACAAAAGAGCATACCGAA+TGG - chr1_2:50960093-50960112 None:intergenic 35.0%
AAAGAATAGCAATGGAGGAA+AGG + chr1_2:50960202-50960221 Msa0075530:CDS 35.0%
AAGAATAGCAATGGAGGAAA+GGG + chr1_2:50960203-50960222 Msa0075530:CDS 35.0%
! CCTCTTTTGTGATAACAGAA+CGG - chr1_2:50960323-50960342 None:intergenic 35.0%
TTCTATCAACAATATCACGG+TGG - chr1_2:50960371-50960390 None:intergenic 35.0%
!!! ACTAAACCCCTTGTTTTCTT+AGG + chr1_2:50960446-50960465 Msa0075530:intron 35.0%
ACTTCACCTAAGAAAACAAG+GGG - chr1_2:50960455-50960474 None:intergenic 35.0%
CAACTTCACCTAAGAAAACA+AGG - chr1_2:50960457-50960476 None:intergenic 35.0%
TGTTAGAATTAGTTCCCGAA+TGG + chr1_2:50960495-50960514 Msa0075530:CDS 35.0%
TCTCGTAAGTGTCTTTCTTT+AGG + chr1_2:50960555-50960574 Msa0075530:intron 35.0%
TTCTTCAAGTGATGCTCTTA+AGG - chr1_2:50960683-50960702 None:intergenic 35.0%
AGAAGCAAAATGAGTAAAGG+AGG + chr1_2:50960699-50960718 Msa0075530:exon 35.0%
AGTAGATCAAACCAACTACA+CGG - chr1_2:50960797-50960816 None:intergenic 35.0%
TCTGCAACAAGAAACATTTC+CGG - chr1_2:50960927-50960946 None:intergenic 35.0%
AATGTAAGAGAAATTGGGGG+TGG - chr1_2:50957784-50957803 None:intergenic 40.0%
!!! GCTACGAAGATTGGGTTTTT+TGG - chr1_2:50957899-50957918 None:intergenic 40.0%
! CTTCTCCAGTGATTTTTCTG+GGG - chr1_2:50957965-50957984 None:intergenic 40.0%
! GCTTCTCCAGTGATTTTTCT+GGG - chr1_2:50957966-50957985 None:intergenic 40.0%
CAATGAAATGACGTCGTTGA+AGG + chr1_2:50958080-50958099 Msa0075530:CDS 40.0%
TGAAGGGAAAATCTGCTAGA+AGG + chr1_2:50958097-50958116 Msa0075530:CDS 40.0%
TGCTAGAAGGCAAATCACAT+TGG + chr1_2:50958110-50958129 Msa0075530:CDS 40.0%
!! AAATCACATTGGCTTCTCCT+CGG + chr1_2:50958121-50958140 Msa0075530:CDS 40.0%
GTTGCAGGTATGAGAATTTG+GGG + chr1_2:50958336-50958355 Msa0075530:intron 40.0%
TTGCAGGTATGAGAATTTGG+GGG + chr1_2:50958337-50958356 Msa0075530:intron 40.0%
TTCTTAATAGCAATCGCCTC+AGG - chr1_2:50958601-50958620 None:intergenic 40.0%
CATCAAACTCAACTGCATCA+GGG - chr1_2:50958684-50958703 None:intergenic 40.0%
GCTAAGTTGTTGTCTGAATC+TGG + chr1_2:50958703-50958722 Msa0075530:CDS 40.0%
ATGCACACTATCATACCTCT+GGG - chr1_2:50958786-50958805 None:intergenic 40.0%
GTAGAAAGAATAGTCAGGTG+TGG + chr1_2:50958973-50958992 Msa0075530:intron 40.0%
AAAGAATAGTCAGGTGTGGT+GGG + chr1_2:50958977-50958996 Msa0075530:intron 40.0%
TGTACAAGAGGATCATGCTT+TGG - chr1_2:50959353-50959372 None:intergenic 40.0%
GGTTTCATCATGTGTACAAG+AGG - chr1_2:50959365-50959384 None:intergenic 40.0%
TTCACTGCAGAGAATGATGA+GGG - chr1_2:50959389-50959408 None:intergenic 40.0%
TTTCACTGCAGAGAATGATG+AGG - chr1_2:50959390-50959409 None:intergenic 40.0%
CATGACTTTCTGAGTTAGCA+GGG - chr1_2:50959457-50959476 None:intergenic 40.0%
ACATGACTTTCTGAGTTAGC+AGG - chr1_2:50959458-50959477 None:intergenic 40.0%
! TGAAGCTTTTAACCAGAAGC+CGG + chr1_2:50959502-50959521 Msa0075530:CDS 40.0%
TTATGCCTCAATCCTTCAGA+AGG + chr1_2:50959537-50959556 Msa0075530:CDS 40.0%
GATTCTGTAACCAACTCAGA+TGG - chr1_2:50959689-50959708 None:intergenic 40.0%
!! CATAGCATCAACGGTTTTGA+AGG - chr1_2:50959828-50959847 None:intergenic 40.0%
TGGAGTTGACATAGCATCAA+CGG - chr1_2:50959837-50959856 None:intergenic 40.0%
AATTTGTATCTACTCCAGCC+AGG + chr1_2:50959861-50959880 Msa0075530:CDS 40.0%
ACCGAATGGAGAAGATTATC+CGG - chr1_2:50960079-50960098 None:intergenic 40.0%
! CTTTTTCCTGAATCTGCAGA+AGG - chr1_2:50960182-50960201 None:intergenic 40.0%
!! TTCTTAGCTTGTGAGATAGC+TGG - chr1_2:50960231-50960250 None:intergenic 40.0%
CTATCTCACAAGCTAAGAAG+CGG + chr1_2:50960232-50960251 Msa0075530:CDS 40.0%
TCATGTTAAAGAGCTTAGGG+AGG - chr1_2:50960275-50960294 None:intergenic 40.0%
CCGTTCTGTTATCACAAAAG+AGG + chr1_2:50960320-50960339 Msa0075530:CDS 40.0%
CAATACAATGACAGGGTTGT+TGG - chr1_2:50960608-50960627 None:intergenic 40.0%
GTGATGCTCTTAAGGATTCA+GGG - chr1_2:50960675-50960694 None:intergenic 40.0%
AGTGATGCTCTTAAGGATTC+AGG - chr1_2:50960676-50960695 None:intergenic 40.0%
! CTTTTGACATTCCGTGTAGT+TGG + chr1_2:50960783-50960802 Msa0075530:three_prime_UTR 40.0%
GTGTTGTGTGAGGATTGTGA+AGG - chr1_2:50957871-50957890 None:intergenic 45.0%
!! TTTGGATCTGGTGTTGTGTG+AGG - chr1_2:50957881-50957900 None:intergenic 45.0%
! GGCTTCTCCAGTGATTTTTC+TGG - chr1_2:50957967-50957986 None:intergenic 45.0%
GATGATTCATTGCTCTTCCG+AGG - chr1_2:50958141-50958160 None:intergenic 45.0%
!!! GGGGGAGTTTTTTGATAGCT+TGG + chr1_2:50958355-50958374 Msa0075530:CDS 45.0%
GAGGTTTACCCATGCTCATT+TGG + chr1_2:50958555-50958574 Msa0075530:CDS 45.0%
CAACTGTGCCAAATGAGCAT+GGG - chr1_2:50958566-50958585 None:intergenic 45.0%
TCAACTGTGCCAAATGAGCA+TGG - chr1_2:50958567-50958586 None:intergenic 45.0%
GCATCAAACTCAACTGCATC+AGG - chr1_2:50958685-50958704 None:intergenic 45.0%
! AATCTGGGACTATGTCTCTG+AGG + chr1_2:50958719-50958738 Msa0075530:CDS 45.0%
ACACTATCATACCTCTGGGT+GGG - chr1_2:50958782-50958801 None:intergenic 45.0%
CATGCACACTATCATACCTC+TGG - chr1_2:50958787-50958806 None:intergenic 45.0%
GAAAGAATAGTCAGGTGTGG+TGG + chr1_2:50958976-50958995 Msa0075530:intron 45.0%
TGAGTAAAAGGCCAAGTCTG+TGG + chr1_2:50959115-50959134 Msa0075530:intron 45.0%
GAGTAAAAGGCCAAGTCTGT+GGG + chr1_2:50959116-50959135 Msa0075530:intron 45.0%
! AACAAAGTGTCCCACAGACT+TGG - chr1_2:50959129-50959148 None:intergenic 45.0%
ATAGGCTGATGAAGTTCCAG+AGG + chr1_2:50959301-50959320 Msa0075530:intron 45.0%
! TCATGCTTTGGACGACTGAA+TGG - chr1_2:50959341-50959360 None:intergenic 45.0%
ACGTGCTTCTAGTGACATTG+CGG + chr1_2:50959421-50959440 Msa0075530:CDS 45.0%
GAAGGATTGAGGCATAAGAG+AGG - chr1_2:50959534-50959553 None:intergenic 45.0%
! TCTGAAACAGGCACAACTGA+GGG - chr1_2:50959620-50959639 None:intergenic 45.0%
!! CTCAAGCTTGACTCTGAAAC+AGG - chr1_2:50959632-50959651 None:intergenic 45.0%
CTGTTTCAGAGTCAAGCTTG+AGG + chr1_2:50959630-50959649 Msa0075530:CDS 45.0%
GAGGATAAATTCCACCTCTG+AGG + chr1_2:50959649-50959668 Msa0075530:CDS 45.0%
!! TATTTTAGGGACCTCAGAGG+TGG - chr1_2:50959663-50959682 None:intergenic 45.0%
!! CGATATTTTAGGGACCTCAG+AGG - chr1_2:50959666-50959685 None:intergenic 45.0%
GTAGCTAGTGTAACTCTGGA+TGG - chr1_2:50959764-50959783 None:intergenic 45.0%
AGGTGTAGCTAGTGTAACTC+TGG - chr1_2:50959768-50959787 None:intergenic 45.0%
!! CTTTTAGGTGGCTTCAATGC+AGG - chr1_2:50959902-50959921 None:intergenic 45.0%
TCAATGACCTTGAACGAGGT+GGG - chr1_2:50959982-50960001 None:intergenic 45.0%
TTCAATGACCTTGAACGAGG+TGG - chr1_2:50959983-50960002 None:intergenic 45.0%
AATGGAGAAGATTATCCGGG+AGG - chr1_2:50960075-50960094 None:intergenic 45.0%
CCGAATGGAGAAGATTATCC+GGG - chr1_2:50960078-50960097 None:intergenic 45.0%
CCCGGATAATCTTCTCCATT+CGG + chr1_2:50960075-50960094 Msa0075530:CDS 45.0%
ACCATTCCTTCTGCAGATTC+AGG + chr1_2:50960173-50960192 Msa0075530:intron 45.0%
TCCTGAATCTGCAGAAGGAA+TGG - chr1_2:50960177-50960196 None:intergenic 45.0%
! TCCCGAATGGATTTCTGAGA+AGG + chr1_2:50960508-50960527 Msa0075530:CDS 45.0%
GCCTTCTCAGAAATCCATTC+GGG - chr1_2:50960512-50960531 None:intergenic 45.0%
CGCCTTCTCAGAAATCCATT+CGG - chr1_2:50960513-50960532 None:intergenic 45.0%
! CGAATGGATTTCTGAGAAGG+CGG + chr1_2:50960511-50960530 Msa0075530:CDS 45.0%
! AATCCATGCTTACTGACTGC+TGG + chr1_2:50960949-50960968 Msa0075530:three_prime_UTR 45.0%
TAACCAGCAGTCAGTAAGCA+TGG - chr1_2:50960955-50960974 None:intergenic 45.0%
GCGAACGAGTTGTATGAAGC+CGG + chr1_2:50958639-50958658 Msa0075530:CDS 50.0%
! GTGCGCGACTCAATGAGTTT+TGG + chr1_2:50958752-50958771 Msa0075530:CDS 50.0%
!!! GTTTTGGAAATCCCACCCAG+AGG + chr1_2:50958768-50958787 Msa0075530:CDS 50.0%
CACACTATCATACCTCTGGG+TGG - chr1_2:50958783-50958802 None:intergenic 50.0%
TTTGGACGACTGAATGGCTC+AGG - chr1_2:50959335-50959354 None:intergenic 50.0%
ACTGCAGAGAATGATGAGGG+AGG - chr1_2:50959386-50959405 None:intergenic 50.0%
TGCCTCAATCCTTCAGAAGG+CGG + chr1_2:50959540-50959559 Msa0075530:CDS 50.0%
! AACCGCCTTCTGAAGGATTG+AGG - chr1_2:50959545-50959564 None:intergenic 50.0%
CTGAGAAAACCGCCTTCTGA+AGG - chr1_2:50959552-50959571 None:intergenic 50.0%
AAACAGGCACAACTGAGGGT+TGG - chr1_2:50959616-50959635 None:intergenic 50.0%
!! CTCTGAAACAGGCACAACTG+AGG - chr1_2:50959621-50959640 None:intergenic 50.0%
TCTGAAGAACCATGAAGCGC+AGG - chr1_2:50959731-50959750 None:intergenic 50.0%
AGCTGGTAGAGTTGTCGTCT+GGG - chr1_2:50959937-50959956 None:intergenic 50.0%
GTTAAAGAGCTTAGGGAGGC+TGG - chr1_2:50960271-50960290 None:intergenic 50.0%
GACTAGCATATCTCCACTGG+AGG - chr1_2:50960537-50960556 None:intergenic 50.0%
CGAGACTAGCATATCTCCAC+TGG - chr1_2:50960540-50960559 None:intergenic 50.0%
! ATATCGAAAGCGCAACGCCG+CGG - chr1_2:50958011-50958030 None:intergenic 55.0%
CGGCGTTGCGCTTTCGATAT+CGG + chr1_2:50958011-50958030 Msa0075530:CDS 55.0%
GCTTCAGCTGATGTCTCAGC+AGG - chr1_2:50959488-50959507 None:intergenic 55.0%
GGCATAAGAGAGGCAACTGC+CGG - chr1_2:50959524-50959543 None:intergenic 55.0%
CGCAGGATGTGCTTCACTAC+TGG - chr1_2:50959714-50959733 None:intergenic 55.0%
GAAGCACATCCTGCGCTTCA+TGG + chr1_2:50959719-50959738 Msa0075530:CDS 55.0%
AGGTGTAGCTGACATCAGCC+TGG - chr1_2:50959882-50959901 None:intergenic 55.0%
GCTGGTAGAGTTGTCGTCTG+GGG - chr1_2:50959936-50959955 None:intergenic 55.0%
GAGCTGGTAGAGTTGTCGTC+TGG - chr1_2:50959938-50959957 None:intergenic 55.0%
GGGCGCTTAACCAACTTGTC+CGG - chr1_2:50959962-50959981 None:intergenic 55.0%
TTAAGCGCCCACCTCGTTCA+AGG + chr1_2:50959972-50959991 Msa0075530:CDS 55.0%
GGCTCAGGCAGCATTTCCTC+TGG - chr1_2:50959320-50959339 None:intergenic 60.0%
GTAGCTGACATCAGCCTGGC+TGG - chr1_2:50959878-50959897 None:intergenic 60.0%
CGACAACTCTACCAGCTCGC+CGG + chr1_2:50959940-50959959 Msa0075530:CDS 60.0%
TACCAGCTCGCCGGACAAGT+TGG + chr1_2:50959949-50959968 Msa0075530:CDS 60.0%
AACCAACTTGTCCGGCGAGC+TGG - chr1_2:50959954-50959973 None:intergenic 60.0%
! TTGCGGGTTCGCATCGGTGG+TGG - chr1_2:50957988-50958007 None:intergenic 65.0%
AAAGCGCAACGCCGCGGTTG+CGG - chr1_2:50958005-50958024 None:intergenic 65.0%
!! GAGAGGCAACTGCCGGCTTC+TGG - chr1_2:50959517-50959536 None:intergenic 65.0%
TCTGAGAAGGCGGCCTCCAG+TGG + chr1_2:50960521-50960540 Msa0075530:CDS 65.0%
CGGTTGCGGGTTCGCATCGG+TGG - chr1_2:50957991-50958010 None:intergenic 70.0%
CCGCGGTTGCGGGTTCGCAT+CGG - chr1_2:50957994-50958013 None:intergenic 70.0%
CCGATGCGAACCCGCAACCG+CGG + chr1_2:50957991-50958010 Msa0075530:CDS 70.0%
AAGCGCAACGCCGCGGTTGC+GGG - chr1_2:50958004-50958023 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 50957752 50961016 50957752 ID=Msa0075530;Name=Msa0075530
chr1_2 mRNA 50957752 50961016 50957752 ID=Msa0075530-mRNA-1;Parent=Msa0075530;Name=Msa0075530-mRNA-1;_AED=0.05;_eAED=0.05;_QI=95|1|1|1|1|1|7|305|608
chr1_2 exon 50957752 50958175 50957752 ID=Msa0075530-mRNA-1:exon:15655;Parent=Msa0075530-mRNA-1
chr1_2 exon 50958343 50958462 50958343 ID=Msa0075530-mRNA-1:exon:15656;Parent=Msa0075530-mRNA-1
chr1_2 exon 50958555 50958789 50958555 ID=Msa0075530-mRNA-1:exon:15657;Parent=Msa0075530-mRNA-1
chr1_2 exon 50959305 50960096 50959305 ID=Msa0075530-mRNA-1:exon:15658;Parent=Msa0075530-mRNA-1
chr1_2 exon 50960189 50960390 50960189 ID=Msa0075530-mRNA-1:exon:15659;Parent=Msa0075530-mRNA-1
chr1_2 exon 50960468 50960558 50960468 ID=Msa0075530-mRNA-1:exon:15660;Parent=Msa0075530-mRNA-1
chr1_2 exon 50960654 50961016 50960654 ID=Msa0075530-mRNA-1:exon:15661;Parent=Msa0075530-mRNA-1
chr1_2 five_prime_UTR 50957752 50957846 50957752 ID=Msa0075530-mRNA-1:five_prime_utr;Parent=Msa0075530-mRNA-1
chr1_2 CDS 50957847 50958175 50957847 ID=Msa0075530-mRNA-1:cds;Parent=Msa0075530-mRNA-1
chr1_2 CDS 50958343 50958462 50958343 ID=Msa0075530-mRNA-1:cds;Parent=Msa0075530-mRNA-1
chr1_2 CDS 50958555 50958789 50958555 ID=Msa0075530-mRNA-1:cds;Parent=Msa0075530-mRNA-1
chr1_2 CDS 50959305 50960096 50959305 ID=Msa0075530-mRNA-1:cds;Parent=Msa0075530-mRNA-1
chr1_2 CDS 50960189 50960390 50960189 ID=Msa0075530-mRNA-1:cds;Parent=Msa0075530-mRNA-1
chr1_2 CDS 50960468 50960558 50960468 ID=Msa0075530-mRNA-1:cds;Parent=Msa0075530-mRNA-1
chr1_2 CDS 50960654 50960711 50960654 ID=Msa0075530-mRNA-1:cds;Parent=Msa0075530-mRNA-1
chr1_2 three_prime_UTR 50960712 50961016 50960712 ID=Msa0075530-mRNA-1:three_prime_utr;Parent=Msa0075530-mRNA-1
Gene Sequence

>Msa0075530

ATGAAAACTTCTTCAGAAACTCCTTCACAATCCTCACACAACACCAGATCCAAAAAACCCAATCTTCGTAGCTCAAAATCTTTATTCAAAGATCCAATTGAACTAACCTCAAAAACCCCAGAAAAATCACTGGAGAAGCCACCACCGATGCGAACCCGCAACCGCGGCGTTGCGCTTTCGATATCGGATATTAGAAAAGTTGCTAAGGGTCTTCAAGATCAGAAAAAACAAAGCAATGAAATGACGTCGTTGAAGGGAAAATCTGCTAGAAGGCAAATCACATTGGCTTCTCCTCGGAAGAGCAATGAATCATCTAATCTTCCTGAAAAGTATGAGAATTTGGGGGAGTTTTTTGATAGCTTGGATAGTTCGATTAGATTGTTGCGATTAAAAGGATCGATGACGTCGTTTAATAATATCAGACCAAAGATTGAAACTTTAACTGATAGGAGGTTTACCCATGCTCATTTGGCACAGTTGAAGTTTATTTTACCTGAGGCGATTGCTATTAAGAAGTTGTTGGTGTTCGATGAGCGAACGAGTTGTATGAAGCCGGATCTTCATGTTAGTATAAACCCTGATGCAGTTGAGTTTGATGCTAAGTTGTTGTCTGAATCTGGGACTATGTCTCTGAGGAAGTTGTTTCGTGCGCGACTCAATGAGTTTTGGAAATCCCACCCAGAGGCTGATGAAGTTCCAGAGGAAATGCTGCCTGAGCCATTCAGTCGTCCAAAGCATGATCCTCTTGTACACATGATGAAACCTCCCTCATCATTCTCTGCAGTGAAATTATCTGTTGCACGTGCTTCTAGTGACATTGCGGATAATACAGACCCTGCTAACTCAGAAAGTCATGTGTCAGTGCCTGCTGAGACATCAGCTGAAGCTTTTAACCAGAAGCCGGCAGTTGCCTCTCTTATGCCTCAATCCTTCAGAAGGCGGTTTTCTCAGAAATTAAAGGAAAATGTACAGCCACTTCAATCTGTTTCAATCCAACCCTCAGTTGTGCCTGTTTCAGAGTCAAGCTTGAGGATAAATTCCACCTCTGAGGTCCCTAAAATATCGCCATCTGAGTTGGTTACAGAATCATCCAGTAGTGAAGCACATCCTGCGCTTCATGGTTCTTCAGACTGCTTCACACCATCCAGAGTTACACTAGCTACACCTAGCAAAACCATTGAGTATACAGAAAGCAAAGATGGGTCCTTCAAAACCGTTGATGCTATGTCAACTCCAGCTAAATTTGTATCTACTCCAGCCAGGCTGATGTCAGCTACACCTGCATTGAAGCCACCTAAAAGAAGTTTTATGACCCCAGACGACAACTCTACCAGCTCGCCGGACAAGTTGGTTAAGCGCCCACCTCGTTCAAGGTCATTGAAATTTGACACTCCTATGAAAAATGAAAATGATGCTGGCGGTTTGTCAATTGATGATGACATTTTTGATATCCTCCCGGATAATCTTCTCCATTCGATTCAGGAAAAAGAAAGAATAGCAATGGAGGAAAGGGATCCAGCTATCTCACAAGCTAAGAAGCGGAAGAAAATTATTGCCAGCCTCCCTAAGCTCTTTAACATGATTCACATGATGTTTCATTCAATAAACCGTTCTGTTATCACAAAAGAGGAGCTGATGAGCAAGATAATCTCAAGCCACCGTGATATTGTTGATAGAAGTGAAGTTGAAGAACAGTTGCATTTGTTGTTAGAATTAGTTCCCGAATGGATTTCTGAGAAGGCGGCCTCCAGTGGAGATATGCTAGTCTCCGTAAACAAAATGTTGAACCCTGAATCCTTAAGAGCATCACTTGAAGAAGCAAAATGA

Protein sequence

>Msa0075530

MKTSSETPSQSSHNTRSKKPNLRSSKSLFKDPIELTSKTPEKSLEKPPPMRTRNRGVALSISDIRKVAKGLQDQKKQSNEMTSLKGKSARRQITLASPRKSNESSNLPEKYENLGEFFDSLDSSIRLLRLKGSMTSFNNIRPKIETLTDRRFTHAHLAQLKFILPEAIAIKKLLVFDERTSCMKPDLHVSINPDAVEFDAKLLSESGTMSLRKLFRARLNEFWKSHPEADEVPEEMLPEPFSRPKHDPLVHMMKPPSSFSAVKLSVARASSDIADNTDPANSESHVSVPAETSAEAFNQKPAVASLMPQSFRRRFSQKLKENVQPLQSVSIQPSVVPVSESSLRINSTSEVPKISPSELVTESSSSEAHPALHGSSDCFTPSRVTLATPSKTIEYTESKDGSFKTVDAMSTPAKFVSTPARLMSATPALKPPKRSFMTPDDNSTSSPDKLVKRPPRSRSLKFDTPMKNENDAGGLSIDDDIFDILPDNLLHSIQEKERIAMEERDPAISQAKKRKKIIASLPKLFNMIHMMFHSINRSVITKEELMSKIISSHRDIVDRSEVEEQLHLLLELVPEWISEKAASSGDMLVSVNKMLNPESLRASLEEAK*