AlfalfaGEDB | Msa1002350

M. sativa cultivar zhongmu-4 / Msa1002350

KEGG: -
GO: GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005911 GO:0006091 GO:0006810 GO:0008150 GO:0008152 GO:0009506 GO:0009507 GO:0009536 GO:0009767 GO:0009773 GO:0009987 GO:0010496 GO:0010497 GO:0010598 GO:0015979 GO:0016020 GO:0016032 GO:0019684 GO:0022900 GO:0030054 GO:0032991 GO:0040011 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044000 GO:0044237 GO:0044403 GO:0044419 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0044766 GO:0046739 GO:0046794 GO:0051179 GO:0051234 GO:0051701 GO:0051704 GO:0051814 GO:0052126 GO:0052192 GO:0055044 GO:0055114 GO:0098796 GO:1902579
PFAM: PF01657.20

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1002350	AES60997.1	98.418	316	5	0	1	316	1	316	0.0	632

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1002350	sp\|Q6NM73\|PDLP2_ARATH	67.230	296	89	2	8	297	10	303	1.25e-134	387

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1002350	G7I3U3	98.418	316	5	0	1	316	1	316	0.0	632

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0029380	Msa1002350	0.839289	1.731973e-57	-8.615850e-47
Msa0040790	Msa1002350	0.822790	1.962080e-53	-8.615850e-47
Msa0077340	Msa1002350	0.836713	7.964295e-57	-8.615850e-47
Msa0077560	Msa1002350	0.829015	6.518921e-55	-8.615850e-47
Msa0093850	Msa1002350	0.806369	8.505110e-50	-8.615850e-47
Msa0608700	Msa1002350	0.834056	3.737836e-56	-8.615850e-47
Msa0624900	Msa1002350	0.821922	3.120560e-53	-8.615850e-47
Msa0649200	Msa1002350	0.838972	2.093142e-57	-8.615850e-47
Msa0652770	Msa1002350	0.813118	3.008740e-51	-8.615850e-47
Msa0664090	Msa1002350	0.808777	2.620960e-50	-8.615850e-47
Msa0693330	Msa1002350	0.824725	6.906485e-54	-8.615850e-47
Msa0693340	Msa1002350	-0.811883	5.602173e-51	-8.615850e-47
Msa0703950	Msa1002350	0.834278	3.288441e-56	-8.615850e-47
Msa0709440	Msa1002350	0.800266	1.562424e-48	-8.615850e-47
Msa0804250	Msa1002350	0.810572	1.078332e-50	-8.615850e-47
Msa0124910	Msa1002350	0.889799	1.751993e-73	-8.615850e-47
Msa0125360	Msa1002350	0.800979	1.117876e-48	-8.615850e-47
Msa0169410	Msa1002350	0.865363	6.233543e-65	-8.615850e-47
Msa0209140	Msa1002350	0.830099	3.552730e-55	-8.615850e-47
Msa0225480	Msa1002350	0.815877	7.380194e-52	-8.615850e-47
Msa0375640	Msa1002350	0.813565	2.399781e-51	-8.615850e-47
Msa0408380	Msa1002350	0.819518	1.113764e-52	-8.615850e-47
Msa0414880	Msa1002350	0.801467	8.883389e-49	-8.615850e-47
Msa0424160	Msa1002350	0.825369	4.865933e-54	-8.615850e-47
Msa1002350	Msa1072940	0.825532	4.453733e-54	-8.615850e-47
Msa1002350	Msa1074900	0.820489	6.677490e-53	-8.615850e-47
Msa1002350	Msa1127590	0.810383	1.184330e-50	-8.615850e-47
Msa1002350	Msa1160920	0.830909	2.251994e-55	-8.615850e-47
Msa1002350	Msa1169660	0.805834	1.102411e-49	-8.615850e-47
Msa1002350	Msa1171290	0.807261	5.509826e-50	-8.615850e-47
Msa1002350	Msa1207330	0.815877	7.380194e-52	-8.615850e-47
Msa1002350	Msa1268240	0.801776	7.675407e-49	-8.615850e-47
Msa1002350	Msa1331300	0.802316	5.944950e-49	-8.615850e-47
Msa1002350	Msa1391500	0.804501	2.095365e-49	-8.615850e-47
Msa1002350	Msa1398810	0.804100	2.539862e-49	-8.615850e-47
Msa1002350	Msa1405460	0.801552	8.531791e-49	-8.615850e-47
Msa1002350	Msa1407840	0.827905	1.208635e-54	-8.615850e-47
Msa1002350	Msa1412000	0.826656	2.407391e-54	-8.615850e-47
Msa1002350	Msa1427110	0.813723	2.215300e-51	-8.615850e-47
Msa1002350	Msa1437810	0.823949	1.051782e-53	-8.615850e-47
Msa1002350	Msa1454500	0.806006	1.014344e-49	-8.615850e-47
Msa0241830	Msa1002350	0.821092	4.851143e-53	-8.615850e-47
Msa0261170	Msa1002350	0.810934	9.004580e-51	-8.615850e-47
Msa0269210	Msa1002350	0.813548	2.420438e-51	-8.615850e-47
Msa0279850	Msa1002350	0.816777	4.642948e-52	-8.615850e-47
Msa0281470	Msa1002350	0.808643	2.799675e-50	-8.615850e-47
Msa0288620	Msa1002350	0.813652	2.296200e-51	-8.615850e-47
Msa0307270	Msa1002350	0.842659	2.258624e-58	-8.615850e-47
Msa0322900	Msa1002350	0.810094	1.367626e-50	-8.615850e-47
Msa0341690	Msa1002350	0.808737	2.673603e-50	-8.615850e-47
Msa0361910	Msa1002350	0.827871	1.231056e-54	-8.615850e-47
Msa0500650	Msa1002350	0.810772	9.759703e-51	-8.615850e-47
Msa0515800	Msa1002350	0.819271	1.267549e-52	-8.615850e-47
Msa0519760	Msa1002350	0.820500	6.637890e-53	-8.615850e-47
Msa0519810	Msa1002350	0.809280	2.045837e-50	-8.615850e-47
Msa0519840	Msa1002350	0.818574	1.825903e-52	-8.615850e-47
Msa0527820	Msa1002350	0.811002	8.706049e-51	-8.615850e-47
Msa0582480	Msa1002350	0.809215	2.112450e-50	-8.615850e-47
Msa0586220	Msa1002350	0.805278	1.442076e-49	-8.615850e-47
Msa0878280	Msa1002350	0.816046	6.766622e-52	-8.615850e-47
Msa0902360	Msa1002350	0.807532	4.827169e-50	-8.615850e-47
Msa0921000	Msa1002350	0.802187	6.320007e-49	-8.615850e-47
Msa0945190	Msa1002350	0.813213	2.867847e-51	-8.615850e-47
Msa0959520	Msa1002350	0.811936	5.454814e-51	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1002350	MtrunA17_Chr1g0186151	98.418	316	5	0	1	316	1	316	0.0	632
Msa1002350	MtrunA17_Chr1g0168311	69.868	302	75	3	1	298	1	290	1.90e-146	414
Msa1002350	MtrunA17_Chr7g0262011	48.789	289	131	4	11	298	83	355	1.65e-88	269
Msa1002350	MtrunA17_Chr1g0190321	39.130	299	156	9	12	298	10	294	2.57e-63	202
Msa1002350	MtrunA17_Chr5g0434531	29.553	291	185	5	9	297	4	276	3.49e-34	126
Msa1002350	MtrunA17_Chr3g0110311	30.822	292	172	6	6	293	5	270	1.07e-33	124
Msa1002350	MtrunA17_Chr7g0230381	28.826	281	166	8	5	275	11	267	1.51e-30	116
Msa1002350	MtrunA17_Chr8g0391511	28.881	277	182	5	26	299	25	289	1.79e-30	116
Msa1002350	MtrunA17_Chr7g0234231	22.835	254	158	4	8	241	4	239	1.17e-16	78.2
Msa1002350	MtrunA17_Chr1g0205771	25.769	260	166	8	47	290	54	302	1.37e-15	77.4
Msa1002350	MtrunA17_Chr1g0206291	25.101	247	160	9	9	237	23	262	5.99e-15	75.5
Msa1002350	MtrunA17_Chr6g0475001	24.149	323	188	11	1	281	1	308	9.77e-15	74.7
Msa1002350	MtrunA17_Chr5g0394001	26.168	214	143	4	38	237	35	247	3.29e-14	73.2
Msa1002350	MtrunA17_Chr3g0109411	27.679	224	149	5	21	234	18	238	4.61e-14	72.8
Msa1002350	MtrunA17_Chr6g0474901	23.462	260	159	5	44	270	33	285	9.32e-14	72.0
Msa1002350	MtrunA17_Chr6g0475201	23.108	251	175	6	1	237	1	247	2.08e-13	70.9
Msa1002350	MtrunA17_Chr3g0081001	22.785	237	170	5	8	234	7	240	2.02e-12	67.8
Msa1002350	MtrunA17_Chr5g0428531	25.103	243	160	9	9	236	9	244	2.26e-12	66.6
Msa1002350	MtrunA17_Chr5g0394021	23.045	243	154	6	68	292	68	295	2.32e-12	67.8
Msa1002350	MtrunA17_Chr1g0206351	25.541	231	135	7	32	237	33	251	2.77e-12	67.4
Msa1002350	MtrunA17_Chr6g0475091	26.050	238	143	7	23	237	30	257	4.08e-12	67.0
Msa1002350	MtrunA17_Chr6g0474871	25.581	301	172	12	6	270	5	289	1.33e-11	65.5
Msa1002350	MtrunA17_Chr6g0474861	25.000	240	161	7	11	236	6	240	3.15e-11	64.3
Msa1002350	MtrunA17_Chr6g0474971	24.809	262	153	9	44	270	33	285	3.40e-11	63.2
Msa1002350	MtrunA17_Chr3g0081031	23.792	269	167	9	12	252	22	280	4.70e-11	63.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1002350	AT1G04520.1	67.230	296	89	2	8	297	10	303	1.27e-135	387
Msa1002350	AT2G33330.1	65.116	301	100	3	1	297	1	300	9.08e-134	382
Msa1002350	AT5G43980.1	44.330	291	136	5	25	300	20	299	7.48e-78	240
Msa1002350	AT3G04370.1	35.738	305	154	6	24	298	25	317	7.97e-59	192
Msa1002350	AT3G04370.2	35.197	304	156	5	24	298	25	316	9.01e-59	191
Msa1002350	AT5G37660.1	30.996	271	168	6	11	279	15	268	4.51e-34	126
Msa1002350	AT5G37660.2	30.996	271	168	6	11	279	15	268	5.23e-34	126
Msa1002350	AT3G60720.3	29.044	272	165	6	33	296	29	280	2.68e-31	119
Msa1002350	AT3G60720.1	28.889	270	164	6	33	294	29	278	2.83e-30	116
Msa1002350	AT2G01660.3	29.966	297	185	9	11	300	7	287	5.05e-29	113
Msa1002350	AT2G01660.1	30.201	298	184	10	11	300	7	288	5.54e-29	113
Msa1002350	AT2G01660.2	31.034	232	142	7	26	250	20	240	7.82e-26	103
Msa1002350	AT1G70690.1	28.571	301	183	8	10	296	9	291	2.05e-24	100
Msa1002350	AT3G60720.2	27.885	208	139	4	33	233	29	232	7.11e-24	98.2
Msa1002350	AT5G48540.1	23.077	221	156	5	34	241	24	243	1.88e-16	78.2
Msa1002350	AT5G40380.1	27.946	297	175	12	9	296	12	278	4.55e-15	76.3
Msa1002350	AT5G40380.3	27.946	297	175	12	9	296	12	278	5.43e-15	75.9
Msa1002350	AT5G40380.2	27.946	297	175	12	9	296	12	278	5.80e-15	75.9
Msa1002350	AT4G05200.1	23.125	320	221	10	12	309	11	327	8.97e-15	75.5
Msa1002350	AT4G05200.2	23.125	320	221	10	12	309	29	345	9.16e-15	75.5
Msa1002350	AT5G41290.1	24.468	282	192	6	6	272	5	280	7.87e-13	68.2

Find 87 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCCCATATGAATGAATATTT+TGG	0.162498	6_4:-87967794	Msa1002350:three_prime_UTR
TCTGCAAGAGTTCAGCTTTC+AGG	0.163538	6_4:-87969202	Msa1002350:CDS
GCTCTCTCTTCTTCTGGTTT+TGG	0.207236	6_4:+87969793	None:intergenic
TGCATTGCTCTCTCTTCTTC+TGG	0.207247	6_4:+87969787	None:intergenic
TCTGGTTACTCTTCATCTTT+TGG	0.217123	6_4:-87968788	Msa1002350:CDS
AGATACCTGTGATGCTATTT+TGG	0.228242	6_4:+87969317	None:intergenic
ATCCAAAATATTCATTCATA+TGG	0.266393	6_4:+87967792	None:intergenic
GGAAAAGAATCAAATGGTTT+TGG	0.277426	6_4:+87969703	None:intergenic
GAATGTGGAAGTTCTATTTC+AGG	0.278336	6_4:-87968908	Msa1002350:CDS
GATTCTTGATATATATCTTT+TGG	0.281699	6_4:-87968000	Msa1002350:three_prime_UTR
GAATCAAAACATGGTTGTTT+TGG	0.289029	6_4:+87969598	None:intergenic
AAGACTGTGGCAATAATATT+AGG	0.324267	6_4:-87968281	Msa1002350:CDS
GGTGGTGGATCATCTTCTTC+TGG	0.327218	6_4:-87968806	Msa1002350:CDS
CCACCCTTTGGAACCCCATT+AGG	0.331693	6_4:+87968842	None:intergenic
AATCCACCTCAAGAAGAATT+TGG	0.332910	6_4:+87968023	None:intergenic
TAGACCAAAGTTGTGTAATC+AGG	0.371990	6_4:+87969469	None:intergenic
AAGATGATGATTTAGAGAAA+TGG	0.375671	6_4:+87969494	None:intergenic
CAAGACTAATTCTTGTAGTT+AGG	0.381469	6_4:-87967909	Msa1002350:three_prime_UTR
GATTGTGAATATGCACCATT+TGG	0.394933	6_4:+87969415	None:intergenic
TCCAAAATATTCATTCATAT+GGG	0.397991	6_4:+87967793	None:intergenic
AGATGATGATTTAGAGAAAT+GGG	0.405156	6_4:+87969495	None:intergenic
TACATGCTGTATGAGGTTGC+TGG	0.420117	6_4:-87969175	Msa1002350:CDS
AAGGGTGGTCATTCTTCATC+TGG	0.421635	6_4:-87968827	Msa1002350:CDS
TTCTCCTGATTACACAACTT+TGG	0.429549	6_4:-87969473	Msa1002350:CDS
TGGTATCATTACAAGGGAAA+AGG	0.439290	6_4:-87967825	Msa1002350:three_prime_UTR
AGATTCTTCAAAACAACAAC+TGG	0.449417	6_4:-87969346	Msa1002350:CDS
GAAGAACAAAAGAAGAAAGA+GGG	0.456695	6_4:+87969531	None:intergenic
TTATCAAGCTTTGTATGTGA+TGG	0.456880	6_4:-87969005	Msa1002350:CDS
AATGGTGTTGTGAGTAATCA+TGG	0.467963	6_4:-87969043	Msa1002350:CDS
CATAGTTTGTCTGAGAGAAC+TGG	0.468018	6_4:+87969238	None:intergenic
ACAACAAATGCTGCTGGAAG+AGG	0.468669	6_4:-87969106	Msa1002350:CDS
GGGAGATAGAGAAAGAATCT+AGG	0.469905	6_4:-87967949	Msa1002350:three_prime_UTR
GGTCAGTGTGAGGGTGATGT+TGG	0.474760	6_4:-87968983	Msa1002350:CDS
GATGAAGAATGACCACCCTT+TGG	0.474944	6_4:+87968830	None:intergenic
TTCAAAACAACAACTGGTAA+TGG	0.481327	6_4:-87969340	Msa1002350:CDS
AAGCTGAACTCTTGCAGAGA+TGG	0.484956	6_4:+87969207	None:intergenic
TGAAGAACAAAAGAAGAAAG+AGG	0.494984	6_4:+87969530	None:intergenic
TTGTGTTGAGATTCAGAGAG+GGG	0.500297	6_4:+87969668	None:intergenic
TCACAGGTATCTTCCAATGC+AGG	0.502297	6_4:-87969306	Msa1002350:CDS
GGTTAAGGAAAAGAATCAAA+TGG	0.504695	6_4:+87969697	None:intergenic
TTGTGAGATCTCCCCTGCAT+TGG	0.508708	6_4:+87969293	None:intergenic
AGATTTGTGGTAAATAGACT+TGG	0.510548	6_4:-87967970	Msa1002350:three_prime_UTR
GGTCATTCTTCATCTGGTGG+TGG	0.515877	6_4:-87968821	Msa1002350:CDS
AATGGCCAAAATAGCATCAC+AGG	0.519556	6_4:-87969322	Msa1002350:CDS
AATCTAGGACTGTTGAATGT+GGG	0.519681	6_4:-87967934	Msa1002350:three_prime_UTR
GCTATGACAGGACAAAATAC+AGG	0.532912	6_4:-87968305	Msa1002350:intron
ATCTGCATCCCTGAAACTTG+TGG	0.533086	6_4:+87969148	None:intergenic
TTATCCTAATGGGGTTCCAA+AGG	0.535083	6_4:-87968846	Msa1002350:CDS
TATCAAGCTTTGTATGTGAT+GGG	0.536644	6_4:-87969004	Msa1002350:CDS
AGGTTGTTACATGCTGTATG+AGG	0.538390	6_4:-87969182	Msa1002350:CDS
GATGTTGGTGATTCTGATTG+TGG	0.539277	6_4:-87968968	Msa1002350:CDS
TATCCTAATGGGGTTCCAAA+GGG	0.541401	6_4:-87968845	Msa1002350:CDS
GAAACATTCACAGATCCAAA+TGG	0.542666	6_4:-87969430	Msa1002350:CDS
TTATATGCTTGCTATTTGCA+AGG	0.544026	6_4:-87968232	Msa1002350:CDS
CACAGGTATCTTCCAATGCA+GGG	0.549377	6_4:-87969305	Msa1002350:CDS
TGTGGAACAACAAATGCTGC+TGG	0.551763	6_4:-87969112	Msa1002350:CDS
TTATTGACTGTAGAAGAAGA+TGG	0.558415	6_4:-87968059	Msa1002350:CDS
AGGCCAAATTCTTCTTGAGG+TGG	0.559342	6_4:-87968026	Msa1002350:exon
GAATCTAGGACTGTTGAATG+TGG	0.563094	6_4:-87967935	Msa1002350:three_prime_UTR
TACACAACTTTGGTCTACAA+AGG	0.569043	6_4:-87969463	Msa1002350:CDS
TGTGTTGAGATTCAGAGAGG+GGG	0.574643	6_4:+87969669	None:intergenic
GATTTGTGGTAAATAGACTT+GGG	0.575361	6_4:-87967969	Msa1002350:three_prime_UTR
CAACAAATGCTGCTGGAAGA+GGG	0.576463	6_4:-87969105	Msa1002350:CDS
TATGTGATGGGTCAGTGTGA+GGG	0.578918	6_4:-87968992	Msa1002350:CDS
TTTGTGTTGAGATTCAGAGA+GGG	0.582808	6_4:+87969667	None:intergenic
GGTGGTCATTCTTCATCTGG+TGG	0.587392	6_4:-87968824	Msa1002350:CDS
GTATGTGATGGGTCAGTGTG+AGG	0.592839	6_4:-87968993	Msa1002350:CDS
AAGAACAAAAGAAGAAAGAG+GGG	0.594004	6_4:+87969532	None:intergenic
CAAAGAGCTCAAGTTGAATG+TGG	0.597170	6_4:-87968923	Msa1002350:CDS
TGGAGGCCAAATTCTTCTTG+AGG	0.599401	6_4:-87968029	Msa1002350:exon
AAGAAGATGGTTTACTGTGG+AGG	0.604602	6_4:-87968046	Msa1002350:CDS
GTGTTGAGATTCAGAGAGGG+GGG	0.605267	6_4:+87969670	None:intergenic
CCAAAATATTCATTCATATG+GGG	0.607107	6_4:+87967794	None:intergenic
ATCTAGGACTGTTGAATGTG+GGG	0.608364	6_4:-87967933	Msa1002350:three_prime_UTR
ATTAGGAGGTATAGCTGCTG+TGG	0.619016	6_4:-87968264	Msa1002350:CDS
AAATATTCATTCATATGGGG+AGG	0.619547	6_4:+87967797	None:intergenic
CCTAATGGGGTTCCAAAGGG+TGG	0.628137	6_4:-87968842	Msa1002350:CDS
TGTTGAGATTCAGAGAGGGG+GGG	0.631211	6_4:+87969671	None:intergenic
GTTTGTGTTGAGATTCAGAG+AGG	0.635997	6_4:+87969666	None:intergenic
ACTGTGGCAATAATATTAGG+AGG	0.641949	6_4:-87968278	Msa1002350:CDS
TGATGAAGAAACGTGATGGT+AGG	0.645756	6_4:-87968205	Msa1002350:intron
ACAGGTATCTTCCAATGCAG+GGG	0.657277	6_4:-87969304	Msa1002350:CDS
AATTTGATGAAGAAACGTGA+TGG	0.662013	6_4:-87968209	Msa1002350:CDS
GTTCTCTCAGACAAACTATG+TGG	0.667348	6_4:-87969235	Msa1002350:CDS
ATGGAGAGAGAATCAAAACA+TGG	0.673903	6_4:+87969589	None:intergenic
TAGAAGAAGATGGTTTACTG+TGG	0.689143	6_4:-87968049	Msa1002350:CDS
ACAAAATACAGGAAAGACTG+TGG	0.709113	6_4:-87968294	Msa1002350:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	CAATTTTCTCAAATTATTAT+CGG	+	chr6_4:87968983-87969002	None:intergenic	15.0%
!!!	CAATTTTCTCAAATTATTAT+CGG	+	chr6_4:87968983-87969002	None:intergenic	15.0%
!!	ATTTCTCAAAAACCAAAAAT+GGG	-	chr6_4:87968012-87968031	Msa1002350:exon	20.0%
!!!	AGTTTTAGTTATTATCCTAA+TGG	-	chr6_4:87968723-87968742	Msa1002350:intron	20.0%
!!!	GTTTTAGTTATTATCCTAAT+GGG	-	chr6_4:87968724-87968743	Msa1002350:intron	20.0%
!!!	TTTTAGTTATTATCCTAATG+GGG	-	chr6_4:87968725-87968744	Msa1002350:intron	20.0%
!!	TATATATAGTTTCACAAAGA+AGG	-	chr6_4:87969111-87969130	Msa1002350:CDS	20.0%
!!	GTTTCATACATATTAGTAAA+TGG	+	chr6_4:87969219-87969238	None:intergenic	20.0%
!!!	GATTCTTGATATATATCTTT+TGG	-	chr6_4:87969580-87969599	Msa1002350:five_prime_UTR	20.0%
!!!	AGATTTTGTTGTGAAAAAAA+TGG	-	chr6_4:87969699-87969718	Msa1002350:five_prime_UTR	20.0%
!!	TCCAAAATATTCATTCATAT+GGG	+	chr6_4:87969790-87969809	None:intergenic	20.0%
!!	ATCCAAAATATTCATTCATA+TGG	+	chr6_4:87969791-87969810	None:intergenic	20.0%
!!	ATTTCTCAAAAACCAAAAAT+GGG	-	chr6_4:87968012-87968031	Msa1002350:exon	20.0%
!!!	AGTTTTAGTTATTATCCTAA+TGG	-	chr6_4:87968723-87968742	Msa1002350:intron	20.0%
!!!	GTTTTAGTTATTATCCTAAT+GGG	-	chr6_4:87968724-87968743	Msa1002350:intron	20.0%
!!!	TTTTAGTTATTATCCTAATG+GGG	-	chr6_4:87968725-87968744	Msa1002350:intron	20.0%
!!	TATATATAGTTTCACAAAGA+AGG	-	chr6_4:87969111-87969130	Msa1002350:CDS	20.0%
!!	GTTTCATACATATTAGTAAA+TGG	+	chr6_4:87969219-87969238	None:intergenic	20.0%
!!!	GATTCTTGATATATATCTTT+TGG	-	chr6_4:87969580-87969599	Msa1002350:five_prime_UTR	20.0%
!!!	AGATTTTGTTGTGAAAAAAA+TGG	-	chr6_4:87969699-87969718	Msa1002350:five_prime_UTR	20.0%
!!	TCCAAAATATTCATTCATAT+GGG	+	chr6_4:87969790-87969809	None:intergenic	20.0%
!!	ATCCAAAATATTCATTCATA+TGG	+	chr6_4:87969791-87969810	None:intergenic	20.0%
!!!	AATCAAATGGTTTTGGTTTT+TGG	+	chr6_4:87967873-87967892	None:intergenic	25.0%
!!!	CATTTTTGGTTTTTGAGAAA+TGG	+	chr6_4:87968013-87968032	None:intergenic	25.0%
!	CATTTCTCAAAAACCAAAAA+TGG	-	chr6_4:87968011-87968030	Msa1002350:three_prime_UTR	25.0%
!!!	TTTTTTGGAAAACCCATTTT+TGG	+	chr6_4:87968027-87968046	None:intergenic	25.0%
!	AGATGATGATTTAGAGAAAT+GGG	+	chr6_4:87968088-87968107	None:intergenic	25.0%
!	AAGATGATGATTTAGAGAAA+TGG	+	chr6_4:87968089-87968108	None:intergenic	25.0%
!!!	TTTGAAGAATCTTGTTTTTG+TGG	+	chr6_4:87968226-87968245	None:intergenic	25.0%
!!!	TATCTATTGATTCTGAATGA+TGG	+	chr6_4:87968835-87968854	None:intergenic	25.0%
!	TCAGAATCAATAGATAAGAT+TGG	-	chr6_4:87968839-87968858	Msa1002350:CDS	25.0%
!!!	ATAAGATTGGTTTCAATTCT+GGG	-	chr6_4:87968852-87968871	Msa1002350:CDS	25.0%
!!!	TTGTACATGGTTTTACTATA+TGG	-	chr6_4:87969405-87969424	Msa1002350:CDS	25.0%
!!!	TGAAAGTGAGAATTGTTTTT+TGG	-	chr6_4:87969735-87969754	Msa1002350:five_prime_UTR	25.0%
!!!	TGTTTTTTGGTATCATTACA+AGG	-	chr6_4:87969748-87969767	Msa1002350:five_prime_UTR	25.0%
!!!	GTTTTTTGGTATCATTACAA+GGG	-	chr6_4:87969749-87969768	Msa1002350:five_prime_UTR	25.0%
!	CCAAAATATTCATTCATATG+GGG	+	chr6_4:87969789-87969808	None:intergenic	25.0%
!!!	AATCAAATGGTTTTGGTTTT+TGG	+	chr6_4:87967873-87967892	None:intergenic	25.0%
!!!	CATTTTTGGTTTTTGAGAAA+TGG	+	chr6_4:87968013-87968032	None:intergenic	25.0%
!	CATTTCTCAAAAACCAAAAA+TGG	-	chr6_4:87968011-87968030	Msa1002350:three_prime_UTR	25.0%
!!!	TTTTTTGGAAAACCCATTTT+TGG	+	chr6_4:87968027-87968046	None:intergenic	25.0%
!	AGATGATGATTTAGAGAAAT+GGG	+	chr6_4:87968088-87968107	None:intergenic	25.0%
!	AAGATGATGATTTAGAGAAA+TGG	+	chr6_4:87968089-87968108	None:intergenic	25.0%
!!!	TTTGAAGAATCTTGTTTTTG+TGG	+	chr6_4:87968226-87968245	None:intergenic	25.0%
!!!	TATCTATTGATTCTGAATGA+TGG	+	chr6_4:87968835-87968854	None:intergenic	25.0%
!	TCAGAATCAATAGATAAGAT+TGG	-	chr6_4:87968839-87968858	Msa1002350:CDS	25.0%
!!!	ATAAGATTGGTTTCAATTCT+GGG	-	chr6_4:87968852-87968871	Msa1002350:CDS	25.0%
!!!	TTGTACATGGTTTTACTATA+TGG	-	chr6_4:87969405-87969424	Msa1002350:CDS	25.0%
!!!	TGAAAGTGAGAATTGTTTTT+TGG	-	chr6_4:87969735-87969754	Msa1002350:five_prime_UTR	25.0%
!!!	TGTTTTTTGGTATCATTACA+AGG	-	chr6_4:87969748-87969767	Msa1002350:five_prime_UTR	25.0%
!!!	GTTTTTTGGTATCATTACAA+GGG	-	chr6_4:87969749-87969768	Msa1002350:five_prime_UTR	25.0%
!	CCAAAATATTCATTCATATG+GGG	+	chr6_4:87969789-87969808	None:intergenic	25.0%
!!!	ATGGTTTTGGTTTTTGGTTT+GGG	+	chr6_4:87967867-87967886	None:intergenic	30.0%
!!!	AATGGTTTTGGTTTTTGGTT+TGG	+	chr6_4:87967868-87967887	None:intergenic	30.0%
!	GGAAAAGAATCAAATGGTTT+TGG	+	chr6_4:87967880-87967899	None:intergenic	30.0%
	GGTTAAGGAAAAGAATCAAA+TGG	+	chr6_4:87967886-87967905	None:intergenic	30.0%
!!!	TTTGGTTTTTGGAGGAAAAA+AGG	+	chr6_4:87967967-87967986	None:intergenic	30.0%
!!!	AACATGGTTGTTTTGGTTTT+TGG	+	chr6_4:87967978-87967997	None:intergenic	30.0%
!	GAATCAAAACATGGTTGTTT+TGG	+	chr6_4:87967985-87968004	None:intergenic	30.0%
	AAGAACAAAAGAAGAAAGAG+GGG	+	chr6_4:87968051-87968070	None:intergenic	30.0%
	GAAGAACAAAAGAAGAAAGA+GGG	+	chr6_4:87968052-87968071	None:intergenic	30.0%
	TGAAGAACAAAAGAAGAAAG+AGG	+	chr6_4:87968053-87968072	None:intergenic	30.0%
!!	TTTTGTGGATTGTGAAACTA+AGG	+	chr6_4:87968211-87968230	None:intergenic	30.0%
	AGATTCTTCAAAACAACAAC+TGG	-	chr6_4:87968234-87968253	Msa1002350:CDS	30.0%
	TTCAAAACAACAACTGGTAA+TGG	-	chr6_4:87968240-87968259	Msa1002350:CDS	30.0%
!	TTATCAAGCTTTGTATGTGA+TGG	-	chr6_4:87968575-87968594	Msa1002350:intron	30.0%
!	TATCAAGCTTTGTATGTGAT+GGG	-	chr6_4:87968576-87968595	Msa1002350:intron	30.0%
!!	GATAAGATTGGTTTCAATTC+TGG	-	chr6_4:87968851-87968870	Msa1002350:CDS	30.0%
	TCTCAAATTATTATCGGTGT+CGG	+	chr6_4:87968977-87968996	None:intergenic	30.0%
!	ATTAATCATTGAGTTGTGTG+TGG	-	chr6_4:87969243-87969262	Msa1002350:CDS	30.0%
	AAGACTGTGGCAATAATATT+AGG	-	chr6_4:87969299-87969318	Msa1002350:CDS	30.0%
!!	TTATATGCTTGCTATTTGCA+AGG	-	chr6_4:87969348-87969367	Msa1002350:CDS	30.0%
	AATTTGATGAAGAAACGTGA+TGG	-	chr6_4:87969371-87969390	Msa1002350:CDS	30.0%
!	TTATTGACTGTAGAAGAAGA+TGG	-	chr6_4:87969521-87969540	Msa1002350:CDS	30.0%
	AGATTTGTGGTAAATAGACT+TGG	-	chr6_4:87969610-87969629	Msa1002350:five_prime_UTR	30.0%
	GATTTGTGGTAAATAGACTT+GGG	-	chr6_4:87969611-87969630	Msa1002350:five_prime_UTR	30.0%
	CAAGACTAATTCTTGTAGTT+AGG	-	chr6_4:87969671-87969690	Msa1002350:five_prime_UTR	30.0%
	AAATATTCATTCATATGGGG+AGG	+	chr6_4:87969786-87969805	None:intergenic	30.0%
!	CCCCATATGAATGAATATTT+TGG	-	chr6_4:87969786-87969805	Msa1002350:five_prime_UTR	30.0%
!!!	ATGGTTTTGGTTTTTGGTTT+GGG	+	chr6_4:87967867-87967886	None:intergenic	30.0%
!!!	AATGGTTTTGGTTTTTGGTT+TGG	+	chr6_4:87967868-87967887	None:intergenic	30.0%
!	GGAAAAGAATCAAATGGTTT+TGG	+	chr6_4:87967880-87967899	None:intergenic	30.0%
	GGTTAAGGAAAAGAATCAAA+TGG	+	chr6_4:87967886-87967905	None:intergenic	30.0%
!!!	TTTGGTTTTTGGAGGAAAAA+AGG	+	chr6_4:87967967-87967986	None:intergenic	30.0%
!!!	AACATGGTTGTTTTGGTTTT+TGG	+	chr6_4:87967978-87967997	None:intergenic	30.0%
!	GAATCAAAACATGGTTGTTT+TGG	+	chr6_4:87967985-87968004	None:intergenic	30.0%
	AAGAACAAAAGAAGAAAGAG+GGG	+	chr6_4:87968051-87968070	None:intergenic	30.0%
	GAAGAACAAAAGAAGAAAGA+GGG	+	chr6_4:87968052-87968071	None:intergenic	30.0%
	TGAAGAACAAAAGAAGAAAG+AGG	+	chr6_4:87968053-87968072	None:intergenic	30.0%
!!	TTTTGTGGATTGTGAAACTA+AGG	+	chr6_4:87968211-87968230	None:intergenic	30.0%
	AGATTCTTCAAAACAACAAC+TGG	-	chr6_4:87968234-87968253	Msa1002350:CDS	30.0%
	TTCAAAACAACAACTGGTAA+TGG	-	chr6_4:87968240-87968259	Msa1002350:CDS	30.0%
!	TTATCAAGCTTTGTATGTGA+TGG	-	chr6_4:87968575-87968594	Msa1002350:intron	30.0%
!	TATCAAGCTTTGTATGTGAT+GGG	-	chr6_4:87968576-87968595	Msa1002350:intron	30.0%
!!	GATAAGATTGGTTTCAATTC+TGG	-	chr6_4:87968851-87968870	Msa1002350:CDS	30.0%
	TCTCAAATTATTATCGGTGT+CGG	+	chr6_4:87968977-87968996	None:intergenic	30.0%
!	ATTAATCATTGAGTTGTGTG+TGG	-	chr6_4:87969243-87969262	Msa1002350:CDS	30.0%
	AAGACTGTGGCAATAATATT+AGG	-	chr6_4:87969299-87969318	Msa1002350:CDS	30.0%
!!	TTATATGCTTGCTATTTGCA+AGG	-	chr6_4:87969348-87969367	Msa1002350:CDS	30.0%
	AATTTGATGAAGAAACGTGA+TGG	-	chr6_4:87969371-87969390	Msa1002350:CDS	30.0%
!	TTATTGACTGTAGAAGAAGA+TGG	-	chr6_4:87969521-87969540	Msa1002350:CDS	30.0%
	AGATTTGTGGTAAATAGACT+TGG	-	chr6_4:87969610-87969629	Msa1002350:five_prime_UTR	30.0%
	GATTTGTGGTAAATAGACTT+GGG	-	chr6_4:87969611-87969630	Msa1002350:five_prime_UTR	30.0%
	CAAGACTAATTCTTGTAGTT+AGG	-	chr6_4:87969671-87969690	Msa1002350:five_prime_UTR	30.0%
	AAATATTCATTCATATGGGG+AGG	+	chr6_4:87969786-87969805	None:intergenic	30.0%
!	CCCCATATGAATGAATATTT+TGG	-	chr6_4:87969786-87969805	Msa1002350:five_prime_UTR	30.0%
!!!	TCTTCTGGTTTTGGTGTATT+GGG	+	chr6_4:87967781-87967800	None:intergenic	35.0%
!!!	TTCTTCTGGTTTTGGTGTAT+TGG	+	chr6_4:87967782-87967801	None:intergenic	35.0%
!!!	TTTTGGTTTGGGTTGATTGT+TGG	+	chr6_4:87967856-87967875	None:intergenic	35.0%
	TTTGTGTTGAGATTCAGAGA+GGG	+	chr6_4:87967916-87967935	None:intergenic	35.0%
!	TGGAGGAAAAAAGGTTTTCT+AGG	+	chr6_4:87967958-87967977	None:intergenic	35.0%
!!!	ATGGTTGTTTTGGTTTTTGG+AGG	+	chr6_4:87967975-87967994	None:intergenic	35.0%
	ATGGAGAGAGAATCAAAACA+TGG	+	chr6_4:87967994-87968013	None:intergenic	35.0%
!!!	AGAAGAAAGAGGGGTTTTTT+TGG	+	chr6_4:87968042-87968061	None:intergenic	35.0%
	TTCTCCTGATTACACAACTT+TGG	-	chr6_4:87968107-87968126	Msa1002350:intron	35.0%
	TAGACCAAAGTTGTGTAATC+AGG	+	chr6_4:87968114-87968133	None:intergenic	35.0%
	TACACAACTTTGGTCTACAA+AGG	-	chr6_4:87968117-87968136	Msa1002350:intron	35.0%
	GAAACATTCACAGATCCAAA+TGG	-	chr6_4:87968150-87968169	Msa1002350:intron	35.0%
	GATTGTGAATATGCACCATT+TGG	+	chr6_4:87968168-87968187	None:intergenic	35.0%
!	CAATCTCTTTCAGCACTTTT+TGG	-	chr6_4:87968183-87968202	Msa1002350:intron	35.0%
!!	AGATACCTGTGATGCTATTT+TGG	+	chr6_4:87968266-87968285	None:intergenic	35.0%
!!	CAGATTCTTTTCAAGACATG+TGG	-	chr6_4:87968450-87968469	Msa1002350:intron	35.0%
!!	GCTTTTTCTGTGATGGAAAA+TGG	-	chr6_4:87968519-87968538	Msa1002350:intron	35.0%
!!	AATGGTGTTGTGAGTAATCA+TGG	-	chr6_4:87968537-87968556	Msa1002350:intron	35.0%
	GAATGTGGAAGTTCTATTTC+AGG	-	chr6_4:87968672-87968691	Msa1002350:intron	35.0%
!	TCTGGTTACTCTTCATCTTT+TGG	-	chr6_4:87968792-87968811	Msa1002350:CDS	35.0%
!	ACCTTCAATCTGAAGTGTTA+AGG	-	chr6_4:87969087-87969106	Msa1002350:CDS	35.0%
	ACCTTAACACTTCAGATTGA+AGG	+	chr6_4:87969091-87969110	None:intergenic	35.0%
	ACAAAATACAGGAAAGACTG+TGG	-	chr6_4:87969286-87969305	Msa1002350:CDS	35.0%
	ACTGTGGCAATAATATTAGG+AGG	-	chr6_4:87969302-87969321	Msa1002350:CDS	35.0%
	TAGAAGAAGATGGTTTACTG+TGG	-	chr6_4:87969531-87969550	Msa1002350:CDS	35.0%
	AATCCACCTCAAGAAGAATT+TGG	+	chr6_4:87969560-87969579	None:intergenic	35.0%
!!	TTTTGGCTGAAAGAGATTTG+TGG	-	chr6_4:87969597-87969616	Msa1002350:five_prime_UTR	35.0%
!	AATCTAGGACTGTTGAATGT+GGG	-	chr6_4:87969646-87969665	Msa1002350:five_prime_UTR	35.0%
	TGGTATCATTACAAGGGAAA+AGG	-	chr6_4:87969755-87969774	Msa1002350:five_prime_UTR	35.0%
!!!	TCTTCTGGTTTTGGTGTATT+GGG	+	chr6_4:87967781-87967800	None:intergenic	35.0%
!!!	TTCTTCTGGTTTTGGTGTAT+TGG	+	chr6_4:87967782-87967801	None:intergenic	35.0%
!!!	TTTTGGTTTGGGTTGATTGT+TGG	+	chr6_4:87967856-87967875	None:intergenic	35.0%
	TTTGTGTTGAGATTCAGAGA+GGG	+	chr6_4:87967916-87967935	None:intergenic	35.0%
!	TGGAGGAAAAAAGGTTTTCT+AGG	+	chr6_4:87967958-87967977	None:intergenic	35.0%
!!!	ATGGTTGTTTTGGTTTTTGG+AGG	+	chr6_4:87967975-87967994	None:intergenic	35.0%
	ATGGAGAGAGAATCAAAACA+TGG	+	chr6_4:87967994-87968013	None:intergenic	35.0%
!!!	AGAAGAAAGAGGGGTTTTTT+TGG	+	chr6_4:87968042-87968061	None:intergenic	35.0%
	TTCTCCTGATTACACAACTT+TGG	-	chr6_4:87968107-87968126	Msa1002350:intron	35.0%
	TAGACCAAAGTTGTGTAATC+AGG	+	chr6_4:87968114-87968133	None:intergenic	35.0%
	TACACAACTTTGGTCTACAA+AGG	-	chr6_4:87968117-87968136	Msa1002350:intron	35.0%
	GAAACATTCACAGATCCAAA+TGG	-	chr6_4:87968150-87968169	Msa1002350:intron	35.0%
	GATTGTGAATATGCACCATT+TGG	+	chr6_4:87968168-87968187	None:intergenic	35.0%
!	CAATCTCTTTCAGCACTTTT+TGG	-	chr6_4:87968183-87968202	Msa1002350:intron	35.0%
!!	AGATACCTGTGATGCTATTT+TGG	+	chr6_4:87968266-87968285	None:intergenic	35.0%
!!	CAGATTCTTTTCAAGACATG+TGG	-	chr6_4:87968450-87968469	Msa1002350:intron	35.0%
!!	GCTTTTTCTGTGATGGAAAA+TGG	-	chr6_4:87968519-87968538	Msa1002350:intron	35.0%
!!	AATGGTGTTGTGAGTAATCA+TGG	-	chr6_4:87968537-87968556	Msa1002350:intron	35.0%
	GAATGTGGAAGTTCTATTTC+AGG	-	chr6_4:87968672-87968691	Msa1002350:intron	35.0%
!	TCTGGTTACTCTTCATCTTT+TGG	-	chr6_4:87968792-87968811	Msa1002350:CDS	35.0%
!	ACCTTCAATCTGAAGTGTTA+AGG	-	chr6_4:87969087-87969106	Msa1002350:CDS	35.0%
	ACCTTAACACTTCAGATTGA+AGG	+	chr6_4:87969091-87969110	None:intergenic	35.0%
	ACAAAATACAGGAAAGACTG+TGG	-	chr6_4:87969286-87969305	Msa1002350:CDS	35.0%
	ACTGTGGCAATAATATTAGG+AGG	-	chr6_4:87969302-87969321	Msa1002350:CDS	35.0%
	TAGAAGAAGATGGTTTACTG+TGG	-	chr6_4:87969531-87969550	Msa1002350:CDS	35.0%
	AATCCACCTCAAGAAGAATT+TGG	+	chr6_4:87969560-87969579	None:intergenic	35.0%
!!	TTTTGGCTGAAAGAGATTTG+TGG	-	chr6_4:87969597-87969616	Msa1002350:five_prime_UTR	35.0%
!	AATCTAGGACTGTTGAATGT+GGG	-	chr6_4:87969646-87969665	Msa1002350:five_prime_UTR	35.0%
	TGGTATCATTACAAGGGAAA+AGG	-	chr6_4:87969755-87969774	Msa1002350:five_prime_UTR	35.0%
	TTGTGTTGAGATTCAGAGAG+GGG	+	chr6_4:87967915-87967934	None:intergenic	40.0%
	GTTTGTGTTGAGATTCAGAG+AGG	+	chr6_4:87967917-87967936	None:intergenic	40.0%
	AATGGCCAAAATAGCATCAC+AGG	-	chr6_4:87968258-87968277	Msa1002350:CDS	40.0%
!	CATAGTTTGTCTGAGAGAAC+TGG	+	chr6_4:87968345-87968364	None:intergenic	40.0%
	GTTCTCTCAGACAAACTATG+TGG	-	chr6_4:87968345-87968364	Msa1002350:intron	40.0%
	AGGTTGTTACATGCTGTATG+AGG	-	chr6_4:87968398-87968417	Msa1002350:intron	40.0%
!!	CTGGTTTTCCACAAGTTTCA+GGG	-	chr6_4:87968424-87968443	Msa1002350:intron	40.0%
!!!	AGACACTGCTTTTTCTGTGA+TGG	-	chr6_4:87968512-87968531	Msa1002350:intron	40.0%
!!	GATGTTGGTGATTCTGATTG+TGG	-	chr6_4:87968612-87968631	Msa1002350:intron	40.0%
!!	CAAAGAGCTCAAGTTGAATG+TGG	-	chr6_4:87968657-87968676	Msa1002350:intron	40.0%
	TTATCCTAATGGGGTTCCAA+AGG	-	chr6_4:87968734-87968753	Msa1002350:intron	40.0%
	TATCCTAATGGGGTTCCAAA+GGG	-	chr6_4:87968735-87968754	Msa1002350:intron	40.0%
!	GGTTACTCTTCATCTTTTGG+TGG	-	chr6_4:87968795-87968814	Msa1002350:CDS	40.0%
!!	GTCAACTTGTTGTGTTGTGT+AGG	-	chr6_4:87969024-87969043	Msa1002350:CDS	40.0%
	TTGTTGTGTTGTGTAGGTGT+CGG	-	chr6_4:87969030-87969049	Msa1002350:CDS	40.0%
	TGTATGTGTCTGACATGTGT+TGG	+	chr6_4:87969059-87969078	None:intergenic	40.0%
!	CTTCAGATTGAAGGTGTGTT+TGG	+	chr6_4:87969082-87969101	None:intergenic	40.0%
	GAAGGAGCTCAATTTAGCAA+TGG	-	chr6_4:87969129-87969148	Msa1002350:CDS	40.0%
	TGGCTAAATGATGCTATGAC+AGG	-	chr6_4:87969263-87969282	Msa1002350:CDS	40.0%
	GCTATGACAGGACAAAATAC+AGG	-	chr6_4:87969275-87969294	Msa1002350:CDS	40.0%
	TGATGAAGAAACGTGATGGT+AGG	-	chr6_4:87969375-87969394	Msa1002350:CDS	40.0%
	AAGAAGATGGTTTACTGTGG+AGG	-	chr6_4:87969534-87969553	Msa1002350:CDS	40.0%
	GGGAGATAGAGAAAGAATCT+AGG	-	chr6_4:87969631-87969650	Msa1002350:five_prime_UTR	40.0%
!	GAATCTAGGACTGTTGAATG+TGG	-	chr6_4:87969645-87969664	Msa1002350:five_prime_UTR	40.0%
!	ATCTAGGACTGTTGAATGTG+GGG	-	chr6_4:87969647-87969666	Msa1002350:five_prime_UTR	40.0%
!!!	TTCTGGTTTTGGTGTATTGG+GGG	+	chr6_4:87967779-87967798	None:intergenic	40.0%
!!!	CTTCTGGTTTTGGTGTATTG+GGG	+	chr6_4:87967780-87967799	None:intergenic	40.0%
	TTGTGTTGAGATTCAGAGAG+GGG	+	chr6_4:87967915-87967934	None:intergenic	40.0%
	GTTTGTGTTGAGATTCAGAG+AGG	+	chr6_4:87967917-87967936	None:intergenic	40.0%
	AATGGCCAAAATAGCATCAC+AGG	-	chr6_4:87968258-87968277	Msa1002350:CDS	40.0%
!	CATAGTTTGTCTGAGAGAAC+TGG	+	chr6_4:87968345-87968364	None:intergenic	40.0%
	GTTCTCTCAGACAAACTATG+TGG	-	chr6_4:87968345-87968364	Msa1002350:intron	40.0%
	AGGTTGTTACATGCTGTATG+AGG	-	chr6_4:87968398-87968417	Msa1002350:intron	40.0%
!!	CTGGTTTTCCACAAGTTTCA+GGG	-	chr6_4:87968424-87968443	Msa1002350:intron	40.0%
!!!	AGACACTGCTTTTTCTGTGA+TGG	-	chr6_4:87968512-87968531	Msa1002350:intron	40.0%
!!	GATGTTGGTGATTCTGATTG+TGG	-	chr6_4:87968612-87968631	Msa1002350:intron	40.0%
!!	CAAAGAGCTCAAGTTGAATG+TGG	-	chr6_4:87968657-87968676	Msa1002350:intron	40.0%
	TTATCCTAATGGGGTTCCAA+AGG	-	chr6_4:87968734-87968753	Msa1002350:intron	40.0%
	TATCCTAATGGGGTTCCAAA+GGG	-	chr6_4:87968735-87968754	Msa1002350:intron	40.0%
!	GGTTACTCTTCATCTTTTGG+TGG	-	chr6_4:87968795-87968814	Msa1002350:CDS	40.0%
!!	GTCAACTTGTTGTGTTGTGT+AGG	-	chr6_4:87969024-87969043	Msa1002350:CDS	40.0%
	TTGTTGTGTTGTGTAGGTGT+CGG	-	chr6_4:87969030-87969049	Msa1002350:CDS	40.0%
	TGTATGTGTCTGACATGTGT+TGG	+	chr6_4:87969059-87969078	None:intergenic	40.0%
!	CTTCAGATTGAAGGTGTGTT+TGG	+	chr6_4:87969082-87969101	None:intergenic	40.0%
	GAAGGAGCTCAATTTAGCAA+TGG	-	chr6_4:87969129-87969148	Msa1002350:CDS	40.0%
	TGGCTAAATGATGCTATGAC+AGG	-	chr6_4:87969263-87969282	Msa1002350:CDS	40.0%
	GCTATGACAGGACAAAATAC+AGG	-	chr6_4:87969275-87969294	Msa1002350:CDS	40.0%
	TGATGAAGAAACGTGATGGT+AGG	-	chr6_4:87969375-87969394	Msa1002350:CDS	40.0%
	AAGAAGATGGTTTACTGTGG+AGG	-	chr6_4:87969534-87969553	Msa1002350:CDS	40.0%
	GGGAGATAGAGAAAGAATCT+AGG	-	chr6_4:87969631-87969650	Msa1002350:five_prime_UTR	40.0%
!	GAATCTAGGACTGTTGAATG+TGG	-	chr6_4:87969645-87969664	Msa1002350:five_prime_UTR	40.0%
!	ATCTAGGACTGTTGAATGTG+GGG	-	chr6_4:87969647-87969666	Msa1002350:five_prime_UTR	40.0%
!!!	GCTCTCTCTTCTTCTGGTTT+TGG	+	chr6_4:87967790-87967809	None:intergenic	45.0%
	TGCATTGCTCTCTCTTCTTC+TGG	+	chr6_4:87967796-87967815	None:intergenic	45.0%
	TGTGTTGAGATTCAGAGAGG+GGG	+	chr6_4:87967914-87967933	None:intergenic	45.0%
	TCACAGGTATCTTCCAATGC+AGG	-	chr6_4:87968274-87968293	Msa1002350:CDS	45.0%
	CACAGGTATCTTCCAATGCA+GGG	-	chr6_4:87968275-87968294	Msa1002350:CDS	45.0%
	ACAGGTATCTTCCAATGCAG+GGG	-	chr6_4:87968276-87968295	Msa1002350:CDS	45.0%
	AAGCTGAACTCTTGCAGAGA+TGG	+	chr6_4:87968376-87968395	None:intergenic	45.0%
	TCTGCAAGAGTTCAGCTTTC+AGG	-	chr6_4:87968378-87968397	Msa1002350:intron	45.0%
	TACATGCTGTATGAGGTTGC+TGG	-	chr6_4:87968405-87968424	Msa1002350:intron	45.0%
!!!	GCTGGTTTTCCACAAGTTTC+AGG	-	chr6_4:87968423-87968442	Msa1002350:intron	45.0%
	ATCTGCATCCCTGAAACTTG+TGG	+	chr6_4:87968435-87968454	None:intergenic	45.0%
	TGTGGAACAACAAATGCTGC+TGG	-	chr6_4:87968468-87968487	Msa1002350:intron	45.0%
	ACAACAAATGCTGCTGGAAG+AGG	-	chr6_4:87968474-87968493	Msa1002350:intron	45.0%
	CAACAAATGCTGCTGGAAGA+GGG	-	chr6_4:87968475-87968494	Msa1002350:intron	45.0%
!!	TATGTGATGGGTCAGTGTGA+GGG	-	chr6_4:87968588-87968607	Msa1002350:intron	45.0%
	GATGAAGAATGACCACCCTT+TGG	+	chr6_4:87968753-87968772	None:intergenic	45.0%
	AAGGGTGGTCATTCTTCATC+TGG	-	chr6_4:87968753-87968772	Msa1002350:intron	45.0%
!	ATTAGGAGGTATAGCTGCTG+TGG	-	chr6_4:87969316-87969335	Msa1002350:CDS	45.0%
!	TATAGCTGCTGTGGCGTTTT+TGG	-	chr6_4:87969325-87969344	Msa1002350:CDS	45.0%
!	GGTAGGTGTTGTGTTGTACA+TGG	-	chr6_4:87969392-87969411	Msa1002350:CDS	45.0%
	TGGAGGCCAAATTCTTCTTG+AGG	-	chr6_4:87969551-87969570	Msa1002350:CDS	45.0%
	AGGCCAAATTCTTCTTGAGG+TGG	-	chr6_4:87969554-87969573	Msa1002350:exon	45.0%
!!!	GCTCTCTCTTCTTCTGGTTT+TGG	+	chr6_4:87967790-87967809	None:intergenic	45.0%
	TGCATTGCTCTCTCTTCTTC+TGG	+	chr6_4:87967796-87967815	None:intergenic	45.0%
	TGTGTTGAGATTCAGAGAGG+GGG	+	chr6_4:87967914-87967933	None:intergenic	45.0%
	TCACAGGTATCTTCCAATGC+AGG	-	chr6_4:87968274-87968293	Msa1002350:CDS	45.0%
	CACAGGTATCTTCCAATGCA+GGG	-	chr6_4:87968275-87968294	Msa1002350:CDS	45.0%
	ACAGGTATCTTCCAATGCAG+GGG	-	chr6_4:87968276-87968295	Msa1002350:CDS	45.0%
	AAGCTGAACTCTTGCAGAGA+TGG	+	chr6_4:87968376-87968395	None:intergenic	45.0%
	TCTGCAAGAGTTCAGCTTTC+AGG	-	chr6_4:87968378-87968397	Msa1002350:intron	45.0%
	TACATGCTGTATGAGGTTGC+TGG	-	chr6_4:87968405-87968424	Msa1002350:intron	45.0%
!!!	GCTGGTTTTCCACAAGTTTC+AGG	-	chr6_4:87968423-87968442	Msa1002350:intron	45.0%
	ATCTGCATCCCTGAAACTTG+TGG	+	chr6_4:87968435-87968454	None:intergenic	45.0%
	TGTGGAACAACAAATGCTGC+TGG	-	chr6_4:87968468-87968487	Msa1002350:intron	45.0%
	ACAACAAATGCTGCTGGAAG+AGG	-	chr6_4:87968474-87968493	Msa1002350:intron	45.0%
	CAACAAATGCTGCTGGAAGA+GGG	-	chr6_4:87968475-87968494	Msa1002350:intron	45.0%
!!	TATGTGATGGGTCAGTGTGA+GGG	-	chr6_4:87968588-87968607	Msa1002350:intron	45.0%
	GATGAAGAATGACCACCCTT+TGG	+	chr6_4:87968753-87968772	None:intergenic	45.0%
	AAGGGTGGTCATTCTTCATC+TGG	-	chr6_4:87968753-87968772	Msa1002350:intron	45.0%
!	ATTAGGAGGTATAGCTGCTG+TGG	-	chr6_4:87969316-87969335	Msa1002350:CDS	45.0%
!	TATAGCTGCTGTGGCGTTTT+TGG	-	chr6_4:87969325-87969344	Msa1002350:CDS	45.0%
!	GGTAGGTGTTGTGTTGTACA+TGG	-	chr6_4:87969392-87969411	Msa1002350:CDS	45.0%
	TGGAGGCCAAATTCTTCTTG+AGG	-	chr6_4:87969551-87969570	Msa1002350:CDS	45.0%
	AGGCCAAATTCTTCTTGAGG+TGG	-	chr6_4:87969554-87969573	Msa1002350:exon	45.0%
	TGTTGAGATTCAGAGAGGGG+GGG	+	chr6_4:87967912-87967931	None:intergenic	50.0%
	GTGTTGAGATTCAGAGAGGG+GGG	+	chr6_4:87967913-87967932	None:intergenic	50.0%
	TTGTGAGATCTCCCCTGCAT+TGG	+	chr6_4:87968290-87968309	None:intergenic	50.0%
!!	GTATGTGATGGGTCAGTGTG+AGG	-	chr6_4:87968587-87968606	Msa1002350:intron	50.0%
	GGTGGTCATTCTTCATCTGG+TGG	-	chr6_4:87968756-87968775	Msa1002350:intron	50.0%
	GGTCATTCTTCATCTGGTGG+TGG	-	chr6_4:87968759-87968778	Msa1002350:intron	50.0%
!!	GGTGGTGGATCATCTTCTTC+TGG	-	chr6_4:87968774-87968793	Msa1002350:intron	50.0%
	TGTTGAGATTCAGAGAGGGG+GGG	+	chr6_4:87967912-87967931	None:intergenic	50.0%
	GTGTTGAGATTCAGAGAGGG+GGG	+	chr6_4:87967913-87967932	None:intergenic	50.0%
	TTGTGAGATCTCCCCTGCAT+TGG	+	chr6_4:87968290-87968309	None:intergenic	50.0%
!!	GTATGTGATGGGTCAGTGTG+AGG	-	chr6_4:87968587-87968606	Msa1002350:intron	50.0%
	GGTGGTCATTCTTCATCTGG+TGG	-	chr6_4:87968756-87968775	Msa1002350:intron	50.0%
	GGTCATTCTTCATCTGGTGG+TGG	-	chr6_4:87968759-87968778	Msa1002350:intron	50.0%
!!	GGTGGTGGATCATCTTCTTC+TGG	-	chr6_4:87968774-87968793	Msa1002350:intron	50.0%
	GGTCAGTGTGAGGGTGATGT+TGG	-	chr6_4:87968597-87968616	Msa1002350:intron	55.0%
!!	CCACCCTTTGGAACCCCATT+AGG	+	chr6_4:87968741-87968760	None:intergenic	55.0%
	CCTAATGGGGTTCCAAAGGG+TGG	-	chr6_4:87968738-87968757	Msa1002350:intron	55.0%
	GGTCAGTGTGAGGGTGATGT+TGG	-	chr6_4:87968597-87968616	Msa1002350:intron	55.0%
!!	CCACCCTTTGGAACCCCATT+AGG	+	chr6_4:87968741-87968760	None:intergenic	55.0%
	CCTAATGGGGTTCCAAAGGG+TGG	-	chr6_4:87968738-87968757	Msa1002350:intron	55.0%
	AGAGAGGGGGGGACAGGTTA+AGG	+	chr6_4:87967901-87967920	None:intergenic	60.0%
	AGATTCAGAGAGGGGGGGAC+AGG	+	chr6_4:87967907-87967926	None:intergenic	60.0%
	AGAGAGGGGGGGACAGGTTA+AGG	+	chr6_4:87967901-87967920	None:intergenic	60.0%
	AGATTCAGAGAGGGGGGGAC+AGG	+	chr6_4:87967907-87967926	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr6_4	gene	87967778	87969824	87967778	ID=Msa1002350;Name=Msa1002350
chr6_4	mRNA	87967778	87969824	87967778	ID=Msa1002350-mRNA-1;Parent=Msa1002350;Name=Msa1002350-mRNA-1;_AED=0.04;_eAED=0.04;_QI=252\|0.5\|0.66\|1\|1\|1\|3\|253\|316
chr6_4	exon	87967778	87968082	87967778	ID=Msa1002350-mRNA-1:exon:17127;Parent=Msa1002350-mRNA-1
chr6_4	exon	87968206	87968317	87968206	ID=Msa1002350-mRNA-1:exon:17126;Parent=Msa1002350-mRNA-1
chr6_4	exon	87968786	87969824	87968786	ID=Msa1002350-mRNA-1:exon:17125;Parent=Msa1002350-mRNA-1
chr6_4	five_prime_UTR	87969573	87969824	87969573	ID=Msa1002350-mRNA-1:five_prime_utr;Parent=Msa1002350-mRNA-1
chr6_4	CDS	87968786	87969572	87968786	ID=Msa1002350-mRNA-1:cds;Parent=Msa1002350-mRNA-1
chr6_4	CDS	87968206	87968317	87968206	ID=Msa1002350-mRNA-1:cds;Parent=Msa1002350-mRNA-1
chr6_4	CDS	87968031	87968082	87968031	ID=Msa1002350-mRNA-1:cds;Parent=Msa1002350-mRNA-1
chr6_4	three_prime_UTR	87967778	87968030	87967778	ID=Msa1002350-mRNA-1:three_prime_utr;Parent=Msa1002350-mRNA-1

Gene Sequence

>Msa1002350

ATGGGTTTTCCAAAAAAACCCCTCTTTCTTCTTTTGTTCTTCATTTTCTTCACAACCCATTTCTCTAAATCATCATCTTCTCCTGATTACACAACTTTGGTCTACAAAGGTTGTTCAAAAGAAACATTCACAGATCCAAATGGTGCATATTCACAATCTCTTTCAGCACTTTTTGGTTCCTTAGTTTCACAATCCACAAAAACAAGATTCTTCAAAACAACAACTGGTAATGGCCAAAATAGCATCACAGGTATCTTCCAATGCAGGGGAGATCTCACAAACTCAGATTGCTACAGCTGTGTTAGCAAGCTTCCAGTTCTCTCAGACAAACTATGTGGCAAAACCATCTCTGCAAGAGTTCAGCTTTCAGGTTGTTACATGCTGTATGAGGTTGCTGGTTTTCCACAAGTTTCAGGGATGCAGATTCTTTTCAAGACATGTGGAACAACAAATGCTGCTGGAAGAGGGTTTGAAGAGAGAAGAGACACTGCTTTTTCTGTGATGGAAAATGGTGTTGTGAGTAATCATGGTTTTTATGTTACTACTTATCAAGCTTTGTATGTGATGGGTCAGTGTGAGGGTGATGTTGGTGATTCTGATTGTGGTGAGTGTGTTAAATCTGCTGTTCAAAGAGCTCAAGTTGAATGTGGAAGTTCTATTTCAGGACAAATTTATTTGCATAAGTGCTTTATTAGTTTTAGTTATTATCCTAATGGGGTTCCAAAGGGTGGTCATTCTTCATCTGGTGGTGGATCATCTTCTTCTGGTTACTCTTCATCTTTTGGTGGACAAAATACAGGAAAGACTGTGGCAATAATATTAGGAGGTATAGCTGCTGTGGCGTTTTTGGTTATATGCTTGCTATTTGCAAGGAATTTGATGAAGAAACGTGATGGTAGATTATTGACTGTAGAAGAAGATGGTTTACTGTGGAGGCCAAATTCTTCTTGA

Protein sequence

>Msa1002350

MGFPKKPLFLLLFFIFFTTHFSKSSSSPDYTTLVYKGCSKETFTDPNGAYSQSLSALFGSLVSQSTKTRFFKTTTGNGQNSITGIFQCRGDLTNSDCYSCVSKLPVLSDKLCGKTISARVQLSGCYMLYEVAGFPQVSGMQILFKTCGTTNAAGRGFEERRDTAFSVMENGVVSNHGFYVTTYQALYVMGQCEGDVGDSDCGECVKSAVQRAQVECGSSISGQIYLHKCFISFSYYPNGVPKGGHSSSGGGSSSSGYSSSFGGQNTGKTVAIILGGIAAVAFLVICLLFARNLMKKRDGRLLTVEEDGLLWRPNSS*