AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0878280


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0878280 MtrunA17_Chr6g0460791 96.928 1009 31 0 1 1009 1 1009 0.0 2017
Msa0878280 MtrunA17_Chr4g0060191 46.000 1050 493 21 8 1009 15 1038 0.0 900
Msa0878280 MtrunA17_Chr6g0461151 43.102 1051 526 25 6 1009 1 1026 0.0 832
Msa0878280 MtrunA17_Chr8g0349231 42.065 1046 512 21 11 1009 5 1003 0.0 811
Msa0878280 MtrunA17_Chr7g0258331 51.432 768 324 13 271 1009 28 775 0.0 784
Msa0878280 MtrunA17_Chr1g0174761 51.765 765 324 12 271 1009 29 774 0.0 781
Msa0878280 MtrunA17_Chr5g0397601 49.217 766 342 14 271 1009 262 1007 0.0 758
Msa0878280 MtrunA17_Chr5g0397601 45.312 128 69 1 11 138 5 131 3.75e-29 125
Msa0878280 MtrunA17_Chr1g0174581 48.961 770 344 14 271 1009 46 797 0.0 747
Msa0878280 MtrunA17_Chr4g0033151 49.935 769 342 15 263 1009 23 770 0.0 745
Msa0878280 MtrunA17_Chr3g0087501 46.034 832 395 15 212 1009 11 822 0.0 739
Msa0878280 MtrunA17_Chr4g0010751 48.828 768 346 14 271 1009 445 1194 0.0 737
Msa0878280 MtrunA17_Chr4g0010751 46.512 129 69 0 11 139 2 130 8.96e-29 124
Msa0878280 MtrunA17_Chr4g0014711 48.168 764 353 12 271 1009 299 1044 0.0 720
Msa0878280 MtrunA17_Chr4g0014711 40.310 129 67 4 9 134 1 122 7.87e-18 89.4
Msa0878280 MtrunA17_Chr7g0247271 47.801 705 319 12 333 1009 283 966 0.0 653
Msa0878280 MtrunA17_Chr7g0247271 25.079 630 321 24 7 537 78 655 3.48e-27 119
Msa0878280 MtrunA17_Chr4g0028371 42.308 780 392 14 262 1009 30 783 0.0 606
Msa0878280 MtrunA17_Chr4g0035961 40.868 783 348 15 262 1009 30 732 0.0 585
Msa0878280 MtrunA17_Chr1g0151051 39.657 817 420 18 225 1003 11 792 2.37e-173 526
Msa0878280 MtrunA17_Chr5g0447321 34.034 761 452 15 275 1009 27 763 5.10e-143 446
Msa0878280 MtrunA17_Chr4g0010641 51.538 130 61 1 879 1008 1 128 2.67e-40 145
Msa0878280 MtrunA17_Chr6g0461171 48.951 143 72 1 6 147 1 143 4.18e-40 147
Msa0878280 MtrunA17_Chr4g0010701 41.489 94 33 1 892 985 26 97 2.98e-16 75.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0878280 AT3G03680.1 69.599 1023 278 14 9 1009 6 1017 0.0 1398
Msa0878280 AT4G11610.2 44.069 1037 516 17 6 1009 2 1007 0.0 874
Msa0878280 AT4G11610.1 43.900 1041 516 17 6 1009 2 1011 0.0 873
Msa0878280 AT5G17980.1 42.686 1087 502 30 6 1009 1 1049 0.0 838
Msa0878280 AT5G48060.1 43.633 1068 496 25 11 1009 6 1036 0.0 831
Msa0878280 AT1G04150.1 43.938 1031 516 22 11 1009 12 1012 0.0 822
Msa0878280 AT1G22610.1 41.412 1048 548 16 9 1009 1 1029 0.0 799
Msa0878280 AT3G57880.4 51.111 765 328 13 271 1009 29 773 0.0 777
Msa0878280 AT3G57880.2 51.111 765 328 13 271 1009 29 773 0.0 777
Msa0878280 AT3G57880.3 51.111 765 328 13 271 1009 29 773 0.0 777
Msa0878280 AT3G57880.1 51.111 765 328 13 271 1009 29 773 0.0 777
Msa0878280 AT5G12970.1 50.856 759 334 12 271 1009 30 769 0.0 775
Msa0878280 AT1G74720.1 51.421 774 318 13 274 1009 328 1081 0.0 772
Msa0878280 AT1G51570.1 49.283 767 342 13 271 1009 29 776 0.0 757
Msa0878280 AT4G11610.3 44.608 881 433 15 154 1009 24 874 0.0 751
Msa0878280 AT4G00700.1 40.670 1045 531 22 11 1009 5 1006 0.0 741
Msa0878280 AT4G00700.2 40.670 1045 531 22 11 1009 5 1006 0.0 741
Msa0878280 AT5G06850.1 48.249 771 347 14 271 1009 44 794 0.0 729
Msa0878280 AT3G61300.1 40.155 1031 531 26 6 1009 1 972 0.0 712
Msa0878280 AT4G20080.1 46.316 760 366 13 271 1009 36 774 0.0 671
Msa0878280 AT3G61720.1 33.960 798 429 23 271 1006 31 792 2.02e-127 406
Msa0878280 AT5G03435.1 35.509 766 406 27 271 1003 30 740 4.73e-124 395
Msa0878280 AT5G03435.2 36.332 567 293 19 271 809 30 556 3.08e-96 316
Msa0878280 AT5G44760.1 38.660 388 187 12 262 640 19 364 1.56e-68 238

Find 232 sgRNAs with CRISPR-Local

Find 296 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTATGCTGTGCCGTTTAA+AGG 0.159382 6_1:+19028263 Msa0878280:CDS
CAGCTGGGTTTGGGTGGTTT+GGG 0.207939 6_1:+19026333 Msa0878280:CDS
TCTGCTGGAGTTTCTTCTTT+TGG 0.208232 6_1:-19025565 None:intergenic
GTCCTAGTTCGAACCCATTT+TGG 0.213836 6_1:-19027282 None:intergenic
ACAGCTGGGTTTGGGTGGTT+TGG 0.238014 6_1:+19026332 Msa0878280:CDS
CTTGACCGTCTTTCGGCATT+AGG 0.238833 6_1:-19025036 None:intergenic
AGCTCGGTCTGAACCGGCTT+TGG 0.243409 6_1:+19027698 Msa0878280:CDS
GATTGGAAGCTTTGTTTAGT+TGG 0.245110 6_1:+19028183 Msa0878280:CDS
GTTTAAAGGGTTTGTGCTTT+TGG 0.255765 6_1:+19028277 Msa0878280:CDS
CATATCCGTGCTTGTTTAGA+AGG 0.272163 6_1:+19027072 Msa0878280:CDS
TTTGAGCTACTTTGGGAAAA+TGG 0.275712 6_1:+19028533 Msa0878280:three_prime_UTR
TAATGCATTCTTGGTAGAAT+TGG 0.304819 6_1:-19027603 None:intergenic
GGTTTAACATAATGCATTCT+TGG 0.306858 6_1:-19027612 None:intergenic
CCAGGATTTACAGCTGGGTT+TGG 0.309363 6_1:+19026323 Msa0878280:CDS
TAATATGATTTGAGCTACTT+TGG 0.314910 6_1:+19028525 Msa0878280:three_prime_UTR
GATAGGGTGCGTGCTCTTGC+GGG 0.324280 6_1:+19028116 Msa0878280:CDS
TCCGGTGCAGGCGGAATTGC+CGG 0.332209 6_1:-19025625 None:intergenic
GCGAATTGGTTTAGATTAGT+TGG 0.335655 6_1:+19027786 Msa0878280:CDS
GTGGTCTGAATGTGTATAAA+AGG 0.343755 6_1:+19028589 Msa0878280:three_prime_UTR
GCTCGGTCTGAACCGGCTTT+GGG 0.345208 6_1:+19027699 Msa0878280:CDS
GTTTCGAATTCAAGATCAAT+TGG 0.348596 6_1:+19026531 Msa0878280:CDS
GCTTATGTGGTGGCGAAATA+TGG 0.356278 6_1:+19027258 Msa0878280:CDS
AGTAGTTTAATTAGTACTTA+AGG 0.358100 6_1:+19028439 Msa0878280:three_prime_UTR
TCTATATGTTCGCGTTGTTA+AGG 0.359422 6_1:+19025819 Msa0878280:CDS
TGGCGAAATATGGTCCAAAA+TGG 0.360595 6_1:+19027268 Msa0878280:CDS
CTCACTATCACCGGCTGATT+CGG 0.367845 6_1:-19025461 None:intergenic
TCACCGGCTGATTCGGTTAC+CGG 0.369695 6_1:-19025454 None:intergenic
GTGAAAATGAAGGTAAAGAT+TGG 0.376505 6_1:+19025923 Msa0878280:CDS
TCACCGGCTGGTTCGGTAAC+CGG 0.376781 6_1:-19025502 None:intergenic
TGAACTAAAACCGTTGTTGC+CGG 0.377060 6_1:-19027870 None:intergenic
AGGGTCTGAATGTGTATAAA+AGG 0.377898 6_1:+19028609 Msa0878280:three_prime_UTR
CAGGATTTACAGCTGGGTTT+GGG 0.378911 6_1:+19026324 Msa0878280:CDS
GAGTCGTGGCAGTCGGATTC+CGG 0.386228 6_1:+19026222 Msa0878280:CDS
TTAGGAAAAGTTAAAATCTC+TGG 0.386303 6_1:+19025253 Msa0878280:CDS
ATCCTCGGATCCATGTTCTT+TGG 0.388714 6_1:-19027999 None:intergenic
AATATGATTTGAGCTACTTT+GGG 0.390454 6_1:+19028526 Msa0878280:three_prime_UTR
CTTCTGTTCACCGGCTGGTT+CGG 0.392245 6_1:-19025509 None:intergenic
CCAATTGGTTTACTTGAAGT+TGG 0.392682 6_1:+19027171 Msa0878280:CDS
TCTATGCTGTGCCGTTTAAA+GGG 0.398920 6_1:+19028264 Msa0878280:CDS
TCACCGGCTGAATCGGTAAC+AGG 0.400370 6_1:-19025397 None:intergenic
CCTTGCACGGTTCTCACAAT+TGG 0.400687 6_1:+19027363 Msa0878280:CDS
CAATTGGTTTACTTGAAGTT+GGG 0.401660 6_1:+19027172 Msa0878280:CDS
GATTGGCGACGTTGCAGCCC+AGG 0.404597 6_1:+19028154 Msa0878280:CDS
TCGAGATGGTTTAATCTTTG+TGG 0.407465 6_1:+19026615 Msa0878280:CDS
GGTGCTGAAAATGAGGAAAA+AGG 0.410640 6_1:+19028554 Msa0878280:three_prime_UTR
CTGTGGAAGTGGTTCGAATC+AGG 0.410881 6_1:+19028090 Msa0878280:CDS
TTTACTATCCGTTAGAGAAA+AGG 0.414602 6_1:+19025311 Msa0878280:CDS
CTTCTTTAGAAGTTTCTGTT+TGG 0.420548 6_1:+19025986 Msa0878280:CDS
GTATACCATTGCGGTGCTAA+TGG 0.421746 6_1:-19026120 None:intergenic
TGCAGCCCAGGGTGAGAGAT+TGG 0.421788 6_1:+19028166 Msa0878280:CDS
CCAGCTGTAAATCCTGGGTT+TGG 0.421812 6_1:-19026317 None:intergenic
GATTCGCACGTGGGTGAATC+CGG 0.422576 6_1:+19027851 Msa0878280:CDS
GGGAGGGCACAAAGTTTGAT+TGG 0.422832 6_1:+19028137 Msa0878280:CDS
GATGTTTGCGATATTCTGTT+TGG 0.424069 6_1:+19028226 Msa0878280:CDS
GAGTCCTGAACTTTATGTTA+AGG 0.424579 6_1:+19026374 Msa0878280:CDS
TGAGGAAAAGTAAAGCGAAT+TGG 0.426414 6_1:+19027772 Msa0878280:CDS
GGTGCGTGCTCTTGCGGGGA+GGG 0.427713 6_1:+19028121 Msa0878280:CDS
TAAACTTTCGCTCGTGTCTC+CGG 0.428687 6_1:-19026255 None:intergenic
CCAAACCCAGCTGTAAATCC+TGG 0.433014 6_1:-19026323 None:intergenic
CTACGTGGACATGGTAAGTT+TGG 0.434355 6_1:+19028025 Msa0878280:CDS
GCAATCATGACGTCATTTCC+CGG 0.435734 6_1:-19026162 None:intergenic
ATTGATGAATTATTTGATTG+AGG 0.438601 6_1:-19024953 None:intergenic
AGTTCAGGACTCCGAACCTT+AGG 0.439184 6_1:-19026363 None:intergenic
GGTTCAGTTCATGCTTGATT+CGG 0.439464 6_1:+19027731 Msa0878280:CDS
TCGTTTAGCTCGGTCTGAAC+CGG 0.441535 6_1:+19027692 Msa0878280:CDS
ACATCCTTCGTTTCAGCTAC+CGG 0.443201 6_1:-19025661 None:intergenic
ACTTCCACAGACCTCATTGT+TGG 0.444809 6_1:-19028077 None:intergenic
ACTGTTGGTAGAATCAAATA+AGG 0.446566 6_1:-19027921 None:intergenic
GTCAATGACCTCTGAGACGA+TGG 0.447157 6_1:+19025180 Msa0878280:CDS
CGATAGGGTGCGTGCTCTTG+CGG 0.447912 6_1:+19028115 Msa0878280:CDS
CCAAACCCAGGATTTACAGC+TGG 0.448616 6_1:+19026317 Msa0878280:CDS
ATGCATTATGTTAAACCATT+CGG 0.448741 6_1:+19027618 Msa0878280:CDS
TGCGGTGCTAATGGACTATC+CGG 0.452139 6_1:-19026111 None:intergenic
GAACTTGATGAAGAGTTTGA+TGG 0.452182 6_1:+19028050 Msa0878280:CDS
TTTCGAATTCAAGATCAATT+GGG 0.452813 6_1:+19026532 Msa0878280:CDS
TGGAGCAACGAATCTTCTTC+CGG 0.452951 6_1:+19027200 Msa0878280:CDS
AGATGCTAGAGATGTTAGAA+TGG 0.455686 6_1:+19027413 Msa0878280:CDS
GATGCTAGAGATGTTAGAAT+GGG 0.456619 6_1:+19027414 Msa0878280:CDS
AACAATGAGGTCTGTGGAAG+TGG 0.457588 6_1:+19028079 Msa0878280:CDS
CTATCCGGTGGAACTCTCTT+CGG 0.457963 6_1:-19026096 None:intergenic
TTCATGGTTGAGTTTAATGC+AGG 0.457985 6_1:+19027569 Msa0878280:CDS
TGAGCCTTAACATAAAGTTC+AGG 0.461491 6_1:-19026378 None:intergenic
TAAGGCTCAGCTTGGTGCAC+AGG 0.461853 6_1:+19026392 Msa0878280:CDS
TGAGGTTTAGGAACAGAATG+AGG 0.463797 6_1:+19027973 Msa0878280:CDS
TTACTTGAAGTTGGGATTCG+TGG 0.464302 6_1:+19027180 Msa0878280:CDS
TGAAAATGAAGGTAAAGATT+GGG 0.466816 6_1:+19025924 Msa0878280:CDS
ACAACGCGAACATATAGAAA+TGG 0.467257 6_1:-19025814 None:intergenic
CATTCCATCTCGGGTTAAAC+CGG 0.467359 6_1:-19027314 None:intergenic
GTGTATTGCTCATTCCATCT+CGG 0.471544 6_1:-19027324 None:intergenic
TTATGTTAAACCATTCGGTC+CGG 0.472094 6_1:+19027623 Msa0878280:CDS
TGTATTGCTCATTCCATCTC+GGG 0.473085 6_1:-19027323 None:intergenic
GCTGTTCCTTGACCGTCTTT+CGG 0.475271 6_1:-19025043 None:intergenic
TCTCAGATTAAAGGTGAACT+TGG 0.475536 6_1:+19025343 Msa0878280:CDS
CCAACTTCAAGTAAACCAAT+TGG 0.475732 6_1:-19027171 None:intergenic
CTGAGGCATCCGAGGTTTCG+TGG 0.481796 6_1:+19028314 Msa0878280:CDS
ATTCTGTTTGGTAATGTCGT+TGG 0.483815 6_1:+19028238 Msa0878280:CDS
ACCGGCAATTCCGCCTGCAC+CGG 0.485309 6_1:+19025624 Msa0878280:CDS
TGGTTTGGGCTCCGAACCTA+AGG 0.485892 6_1:+19026347 Msa0878280:CDS
TGAAGGTAAAGATTGGGATC+AGG 0.487382 6_1:+19025930 Msa0878280:CDS
CCCATTCTCCTCGCACCACC+TGG 0.489919 6_1:-19027513 None:intergenic
AAAAGCACAAACCCTTTAAA+CGG 0.491505 6_1:-19028275 None:intergenic
TCATGATTGCTGTATGGATT+GGG 0.495653 6_1:+19026175 Msa0878280:CDS
TCCGACGTGGAATGAAGATC+TGG 0.495816 6_1:+19026455 Msa0878280:CDS
CTCAAAACGTCTTGTTGACC+CGG 0.496992 6_1:-19027642 None:intergenic
GCCAGGTGGTGCGAGGAGAA+TGG 0.497164 6_1:+19027512 Msa0878280:CDS
GATTTACAGCTGGGTTTGGG+TGG 0.500175 6_1:+19026327 Msa0878280:CDS
CCAGGTGGTGCGAGGAGAAT+GGG 0.500720 6_1:+19027513 Msa0878280:CDS
GGCGAAATATGGTCCAAAAT+GGG 0.500863 6_1:+19027269 Msa0878280:CDS
TGGGCTCCGAACCTAAGGTT+CGG 0.502057 6_1:+19026352 Msa0878280:CDS
CGACGGAAGTAGTTTCTGTA+AGG 0.503747 6_1:+19024981 Msa0878280:CDS
GGCAATTCCGCCTGCACCGG+AGG 0.503883 6_1:+19025627 Msa0878280:CDS
AGCTTCCAATCTCTCACCCT+GGG 0.505653 6_1:-19028171 None:intergenic
GTCCAAAATGGGTTCGAACT+AGG 0.506579 6_1:+19027280 Msa0878280:CDS
CAGTTAACGAAGCCTCCAAT+TGG 0.508014 6_1:+19027156 Msa0878280:CDS
GGATTAACAACCTCCGGTGC+AGG 0.508272 6_1:-19025637 None:intergenic
AGCAGAGAAAACTCCGGCAC+CGG 0.509315 6_1:+19025582 Msa0878280:CDS
ACCGGTGGATTAACAACCTC+CGG 0.513220 6_1:-19025643 None:intergenic
ATGACTAGAAACGGTTCAAA+CGG 0.513831 6_1:-19026495 None:intergenic
TATGTTAAACCATTCGGTCC+GGG 0.515413 6_1:+19027624 Msa0878280:CDS
CAAACCCAGGATTTACAGCT+GGG 0.518498 6_1:+19026318 Msa0878280:CDS
AAATCCACCGGCGAATCCAC+CGG 0.518908 6_1:+19025606 Msa0878280:CDS
AGGACTCCGAACCTTAGGTT+CGG 0.519500 6_1:-19026358 None:intergenic
TCTAATGTAATGACTAGAAA+CGG 0.519759 6_1:-19026504 None:intergenic
GAGGAAAATCTTTCTTACAC+AGG 0.520301 6_1:+19026642 Msa0878280:CDS
AGTCTCAAATACCACAGCTT+GGG 0.521141 6_1:-19026285 None:intergenic
TCTTGTTGACCCGGACCGAA+TGG 0.521610 6_1:-19027633 None:intergenic
AAGAGATTTGAATCCACAAT+GGG 0.525082 6_1:+19025123 Msa0878280:CDS
TAAAAGGTTACCGTTGATTG+TGG 0.528483 6_1:+19028625 Msa0878280:three_prime_UTR
GGATTCCGGTGGTTTGATAC+CGG 0.531419 6_1:+19026236 Msa0878280:CDS
ATTGGCGACGTTGCAGCCCA+GGG 0.533947 6_1:+19028155 Msa0878280:CDS
TCCACCGGTAGCTGAAACGA+AGG 0.537813 6_1:+19025657 Msa0878280:CDS
GGAATTGCCGGTGGATTCGC+CGG 0.539605 6_1:-19025613 None:intergenic
GTCATGATTGCTGTATGGAT+TGG 0.539909 6_1:+19026174 Msa0878280:CDS
TCCATGTGGCGTCGATCGAG+AGG 0.541235 6_1:+19026565 Msa0878280:CDS
ACTTCAAGTAAACCAATTGG+AGG 0.542639 6_1:-19027168 None:intergenic
ACCGGCTTTGGGTTCAGAAG+TGG 0.542962 6_1:+19027710 Msa0878280:CDS
TGGTTCGAATCAGGTACGAT+AGG 0.544765 6_1:+19028099 Msa0878280:CDS
GGGTGCGTGCTCTTGCGGGG+AGG 0.546936 6_1:+19028120 Msa0878280:CDS
AAACAAAGAGAAGCAAATAA+CGG 0.548286 6_1:+19026032 Msa0878280:CDS
AGAAGAAAATACAAAAGAAG+AGG 0.548452 6_1:+19025537 Msa0878280:CDS
AGGTCATTGACTCTTGATCA+AGG 0.551626 6_1:-19025168 None:intergenic
CTTTATGTTAAGGCTCAGCT+TGG 0.551843 6_1:+19026384 Msa0878280:CDS
TAGTAACGGCTCGTTTAGCT+CGG 0.551888 6_1:+19027682 Msa0878280:CDS
TTAACTGCTTCGCAGAAGCA+CGG 0.552505 6_1:-19027140 None:intergenic
ATGACGTCATGATTGCTGTA+TGG 0.553152 6_1:+19026169 Msa0878280:CDS
ACCACTTCTGAACCCAAAGC+CGG 0.553210 6_1:-19027711 None:intergenic
GTTTAATCTTTGTGGTTCAG+AGG 0.554034 6_1:+19026623 Msa0878280:CDS
TTCCGGTGAAAACGAAAGAC+GGG 0.555556 6_1:+19027217 Msa0878280:CDS
TGGAACAACTGATGCTTATG+TGG 0.556975 6_1:+19027245 Msa0878280:CDS
CGGATTGGTTTAGTCAACTC+GGG 0.559219 6_1:+19026429 Msa0878280:CDS
TCGGATTGGTTTAGTCAACT+CGG 0.561294 6_1:+19026428 Msa0878280:CDS
CGACTCCTGAAAAGCTTCAT+CGG 0.561784 6_1:-19026205 None:intergenic
CTTGAAACGGAAAATTCACC+GGG 0.567341 6_1:+19026144 Msa0878280:CDS
TGGTCTGAATGTGTATAAAA+GGG 0.568281 6_1:+19028590 Msa0878280:three_prime_UTR
GAACTAGGACTATTGTAGAC+CGG 0.568885 6_1:+19027295 Msa0878280:CDS
CTATTTCAGTCCACAATCAA+CGG 0.570423 6_1:-19028635 None:intergenic
ATCCGTGCTTGTTTAGAAGG+TGG 0.571890 6_1:+19027075 Msa0878280:CDS
AATGAGGGTGCCAAAGAACA+TGG 0.574433 6_1:+19027989 Msa0878280:CDS
GGAAAATGGTGCTGAAAATG+AGG 0.575120 6_1:+19028547 Msa0878280:three_prime_UTR
GCAATGGTATACGCTTGAAA+CGG 0.576982 6_1:+19026131 Msa0878280:CDS
TCGAGTTTCTCGTCCCATTG+TGG 0.578483 6_1:-19025136 None:intergenic
ATTGCCGGTGGATTCGCCGG+TGG 0.579450 6_1:-19025610 None:intergenic
TAGTCTCAAATACCACAGCT+TGG 0.579911 6_1:-19026286 None:intergenic
TAGACCGGTTTAACCCGAGA+TGG 0.580601 6_1:+19027310 Msa0878280:CDS
GCTTGAAACGGAAAATTCAC+CGG 0.581496 6_1:+19026143 Msa0878280:CDS
GTGGGTGAATCCGGCAACAA+CGG 0.581645 6_1:+19027860 Msa0878280:CDS
TTTATTATCTGAGGCATCCG+AGG 0.583279 6_1:+19028306 Msa0878280:CDS
AAGCTTCCAATCTCTCACCC+TGG 0.584206 6_1:-19028172 None:intergenic
ACCGGAGGTTGTTAATCCAC+CGG 0.584801 6_1:+19025642 Msa0878280:CDS
TTACCTGTTACCGATTCAGC+CGG 0.585131 6_1:+19025394 Msa0878280:CDS
GGTTCGAATCAGGTACGATA+GGG 0.586450 6_1:+19028100 Msa0878280:CDS
GAGGATGTCCTACGTGGACA+TGG 0.588871 6_1:+19028016 Msa0878280:CDS
CAAGAGATTTGAATCCACAA+TGG 0.589605 6_1:+19025122 Msa0878280:CDS
CCGGCTGGTTCGGTAACCGG+TGG 0.589713 6_1:-19025499 None:intergenic
TTTATCTTTCTCCCAAGCTG+TGG 0.592083 6_1:+19026274 Msa0878280:CDS
CTTCCGGTGAAAACGAAAGA+CGG 0.595345 6_1:+19027216 Msa0878280:CDS
GAGGTTTAGGAACAGAATGA+GGG 0.595506 6_1:+19027974 Msa0878280:CDS
TCCGGCACCGGAAAATCCAC+CGG 0.596866 6_1:+19025594 Msa0878280:CDS
AGAACAAAGAGTGAAAATGA+AGG 0.597593 6_1:+19025913 Msa0878280:CDS
TCGAGAGGAGATTAGATGAT+CGG 0.599775 6_1:+19026580 Msa0878280:CDS
GCAAACATCGCTGTAGCACG+TGG 0.600043 6_1:-19028212 None:intergenic
CAAACCCAGCTGTAAATCCT+GGG 0.602265 6_1:-19026322 None:intergenic
GGTGCAGGCGGAATTGCCGG+TGG 0.603110 6_1:-19025622 None:intergenic
GGATGTTTATGATCCTTGCA+CGG 0.603723 6_1:+19027350 Msa0878280:CDS
AGTTTAATTAGTACTTAAGG+TGG 0.604988 6_1:+19028442 Msa0878280:three_prime_UTR
TGGTTTGAAAATTTCTTACG+TGG 0.608351 6_1:+19025363 Msa0878280:CDS
GGCATGTCACCACGAAACCT+CGG 0.609287 6_1:-19028323 None:intergenic
GGACGGATGTGAAATCGAGA+TGG 0.611002 6_1:+19026601 Msa0878280:CDS
CCAATTGTGAGAACCGTGCA+AGG 0.616508 6_1:-19027363 None:intergenic
CAAATAACGGAGATTTCACT+CGG 0.617628 6_1:+19026045 Msa0878280:CDS
TCCTTCGTTTCAGCTACCGG+TGG 0.618506 6_1:-19025658 None:intergenic
CCACCGGTTACCGAACCAGC+CGG 0.618550 6_1:+19025499 Msa0878280:CDS
AAAACGAAAGACGGGACACG+TGG 0.618557 6_1:+19027225 Msa0878280:CDS
TGTCTCCGGTATCAAACCAC+CGG 0.619470 6_1:-19026241 None:intergenic
ATGTCCACGTAGGACATCCT+CGG 0.620138 6_1:-19028014 None:intergenic
AGTTCCGAAGAGAGTTCCAC+CGG 0.620502 6_1:+19026092 Msa0878280:CDS
ATACTCATGTGTGGAGCATG+AGG 0.623826 6_1:+19027754 Msa0878280:CDS
GTTAGATGGGATTCGCACGT+GGG 0.625595 6_1:+19027842 Msa0878280:CDS
TTAACAACCTCCGGTGCAGG+CGG 0.629400 6_1:-19025634 None:intergenic
GTTGACTAAACCAATCCGAC+CGG 0.631922 6_1:-19026424 None:intergenic
GAGGAGATTAGATGATCGGA+CGG 0.634983 6_1:+19026584 Msa0878280:CDS
ATGCTAGAGATGTTAGAATG+GGG 0.636316 6_1:+19027415 Msa0878280:CDS
ATAGTCCATTAGCACCGCAA+TGG 0.637924 6_1:+19026115 Msa0878280:CDS
ATCCACCTTCTAAACAAGCA+CGG 0.638012 6_1:-19027077 None:intergenic
AAGAACCTAATGCCGAAAGA+CGG 0.639612 6_1:+19025031 Msa0878280:CDS
GAAAGCTGAAGAGAAGTCAC+CGG 0.642541 6_1:+19025435 Msa0878280:CDS
TGCCAAAGAACATGGATCCG+AGG 0.642801 6_1:+19027997 Msa0878280:CDS
ATTGATCTCCATCGTCTCAG+AGG 0.644785 6_1:-19025188 None:intergenic
AACTGCTATGAAGATAGTAA+CGG 0.650640 6_1:+19027668 Msa0878280:CDS
AAGAAGTTCACGAAAACAGA+CGG 0.651665 6_1:-19028344 None:intergenic
TCACCGGTAACCGAATCAGC+CGG 0.654339 6_1:+19025451 Msa0878280:CDS
TAGAGATCGAAGCAGAAGTG+CGG 0.658980 6_1:+19025768 Msa0878280:CDS
GCTGTGGTATTTGAGACTAA+CGG 0.660341 6_1:+19026290 Msa0878280:CDS
AACTCCAGCAGAGAAAACTC+CGG 0.662938 6_1:+19025576 Msa0878280:CDS
GTTTCAAGCGTATACCATTG+CGG 0.663014 6_1:-19026129 None:intergenic
GAATGGGGAAAATTCGTGTG+CGG 0.663673 6_1:+19027430 Msa0878280:CDS
TAGAGAGAACAGAACAGCAA+CGG 0.670111 6_1:-19024895 None:intergenic
TAATTCATCAATGACTACGA+CGG 0.684352 6_1:+19024964 Msa0878280:exon
ACCAGATCTTCATTCCACGT+CGG 0.689433 6_1:-19026456 None:intergenic
CTAATGCCGAAAGACGGTCA+AGG 0.704793 6_1:+19025037 Msa0878280:CDS
GGTGCTAATGGACTATCCGG+TGG 0.707887 6_1:-19026108 None:intergenic
ATAATCTGATCAGAAAACGA+CGG 0.708907 6_1:-19028377 None:intergenic
ATGGAATGAGCAATACACAT+GGG 0.710143 6_1:+19027329 Msa0878280:CDS
TCAACTCGGGTAATCCGACG+TGG 0.717880 6_1:+19026442 Msa0878280:CDS
ACTAACGGTTATCCAAACCC+AGG 0.721683 6_1:+19026305 Msa0878280:CDS
GATGGAATGAGCAATACACA+TGG 0.725517 6_1:+19027328 Msa0878280:CDS
GGATCCGAGGATGTCCTACG+TGG 0.726968 6_1:+19028010 Msa0878280:CDS
AACAACTGATGCTTATGTGG+TGG 0.739510 6_1:+19027248 Msa0878280:CDS
AATAAGAATTCACGTAGACG+CGG 0.749111 6_1:-19027473 None:intergenic
CAAACTTACCATGTCCACGT+AGG 0.751076 6_1:-19028024 None:intergenic
TTGATTCGGATACTCATGTG+TGG 0.755979 6_1:+19027745 Msa0878280:CDS
TGGGAAAACGAAGATCCATG+TGG 0.766661 6_1:+19026551 Msa0878280:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTAATAGTATTTTTTGA+AGG - chr6_1:19026805-19026824 None:intergenic 10.0%
!! TTCAAAAAATACTATTAATT+AGG + chr6_1:19026804-19026823 Msa0878280:intron 10.0%
!! AGTAAAATATGCAATATATT+TGG - chr6_1:19026685-19026704 None:intergenic 15.0%
!! ATTGATGAATTATTTGATTG+AGG - chr6_1:19024956-19024975 None:intergenic 20.0%
!!! TATATTGCATATTTTACTGT+TGG + chr6_1:19026687-19026706 Msa0878280:intron 20.0%
!! CATATATAAAATGAACACAT+TGG - chr6_1:19026721-19026740 None:intergenic 20.0%
!! AGTAGTTTAATTAGTACTTA+AGG + chr6_1:19028439-19028458 Msa0878280:three_prime_UTR 20.0%
!!! GTGTTTTTATTAATGAGAAG+AGG - chr6_1:19024927-19024946 None:intergenic 25.0%
! TTAGGAAAAGTTAAAATCTC+TGG + chr6_1:19025253-19025272 Msa0878280:CDS 25.0%
! AGAAGAAAATACAAAAGAAG+AGG + chr6_1:19025537-19025556 Msa0878280:CDS 25.0%
! TGAAAATGAAGGTAAAGATT+GGG + chr6_1:19025924-19025943 Msa0878280:CDS 25.0%
! AAACAAAGAGAAGCAAATAA+CGG + chr6_1:19026032-19026051 Msa0878280:CDS 25.0%
! TCTAATGTAATGACTAGAAA+CGG - chr6_1:19026507-19026526 None:intergenic 25.0%
! TTTCGAATTCAAGATCAATT+GGG + chr6_1:19026532-19026551 Msa0878280:CDS 25.0%
! AATGAGCTTATATTTAGAGA+CGG + chr6_1:19026871-19026890 Msa0878280:intron 25.0%
! AATCCAAAATGTCAATTAGT+GGG - chr6_1:19027031-19027050 None:intergenic 25.0%
! AAATCCAAAATGTCAATTAG+TGG - chr6_1:19027032-19027051 None:intergenic 25.0%
!! TTAGATTTTCATGTTCTTCA+TGG + chr6_1:19027553-19027572 Msa0878280:CDS 25.0%
! ATGCATTATGTTAAACCATT+CGG + chr6_1:19027618-19027637 Msa0878280:CDS 25.0%
! AAAGCATACATAAAAACTGT+TGG - chr6_1:19027939-19027958 None:intergenic 25.0%
! AGTTTAATTAGTACTTAAGG+TGG + chr6_1:19028442-19028461 Msa0878280:three_prime_UTR 25.0%
! TAATATGATTTGAGCTACTT+TGG + chr6_1:19028525-19028544 Msa0878280:three_prime_UTR 25.0%
!! AATATGATTTGAGCTACTTT+GGG + chr6_1:19028526-19028545 Msa0878280:three_prime_UTR 25.0%
TAATTCATCAATGACTACGA+CGG + chr6_1:19024964-19024983 Msa0878280:exon 30.0%
AAGAGATTTGAATCCACAAT+GGG + chr6_1:19025123-19025142 Msa0878280:CDS 30.0%
TACAACGACAAAAAAACAAC+TGG + chr6_1:19025214-19025233 Msa0878280:CDS 30.0%
ACAACGACAAAAAAACAACT+GGG + chr6_1:19025215-19025234 Msa0878280:CDS 30.0%
TTTACTATCCGTTAGAGAAA+AGG + chr6_1:19025311-19025330 Msa0878280:CDS 30.0%
TGGTTTGAAAATTTCTTACG+TGG + chr6_1:19025363-19025382 Msa0878280:CDS 30.0%
!!! CTTTTTTCAAAGCTTGTGAT+TGG + chr6_1:19025877-19025896 Msa0878280:CDS 30.0%
AGAACAAAGAGTGAAAATGA+AGG + chr6_1:19025913-19025932 Msa0878280:CDS 30.0%
GTGAAAATGAAGGTAAAGAT+TGG + chr6_1:19025923-19025942 Msa0878280:CDS 30.0%
!! GTTTTCGCTTTTGATAAAGA+AGG + chr6_1:19025952-19025971 Msa0878280:CDS 30.0%
! CTTCTTTAGAAGTTTCTGTT+TGG + chr6_1:19025986-19026005 Msa0878280:CDS 30.0%
GTTTCGAATTCAAGATCAAT+TGG + chr6_1:19026531-19026550 Msa0878280:CDS 30.0%
! CAATTGGTTTACTTGAAGTT+GGG + chr6_1:19027172-19027191 Msa0878280:CDS 30.0%
!! ACAATTGGTGTTTTCGATAA+TGG + chr6_1:19027378-19027397 Msa0878280:CDS 30.0%
TAATGCATTCTTGGTAGAAT+TGG - chr6_1:19027606-19027625 None:intergenic 30.0%
GGTTTAACATAATGCATTCT+TGG - chr6_1:19027615-19027634 None:intergenic 30.0%
AACTGCTATGAAGATAGTAA+CGG + chr6_1:19027668-19027687 Msa0878280:CDS 30.0%
!! ACTGTGTTTTATTGGTTAGA+TGG + chr6_1:19027828-19027847 Msa0878280:CDS 30.0%
!! CTGTGTTTTATTGGTTAGAT+GGG + chr6_1:19027829-19027848 Msa0878280:CDS 30.0%
! ACTGTTGGTAGAATCAAATA+AGG - chr6_1:19027924-19027943 None:intergenic 30.0%
! CTTTCTTGATTCTGATTTTG+AGG + chr6_1:19027955-19027974 Msa0878280:CDS 30.0%
!!! TGATTCTGATTTTGAGGTTT+AGG + chr6_1:19027961-19027980 Msa0878280:CDS 30.0%
! AAAAGCACAAACCCTTTAAA+CGG - chr6_1:19028278-19028297 None:intergenic 30.0%
ATAATCTGATCAGAAAACGA+CGG - chr6_1:19028380-19028399 None:intergenic 30.0%
TGGTCTGAATGTGTATAAAA+GGG + chr6_1:19028590-19028609 Msa0878280:three_prime_UTR 30.0%
CAAGAGATTTGAATCCACAA+TGG + chr6_1:19025122-19025141 Msa0878280:CDS 35.0%
!!! GGGAAGAGAAGTACTTTTTT+AGG + chr6_1:19025235-19025254 Msa0878280:CDS 35.0%
! AAAACGCTCCTTTTCTCTAA+CGG - chr6_1:19025322-19025341 None:intergenic 35.0%
! AGCGTTTTCTCTCAGATTAA+AGG + chr6_1:19025334-19025353 Msa0878280:CDS 35.0%
TCTCAGATTAAAGGTGAACT+TGG + chr6_1:19025343-19025362 Msa0878280:CDS 35.0%
! CTCATCTTTCTTTTCATCAC+CGG - chr6_1:19025416-19025435 None:intergenic 35.0%
!!! GTCTTTTTTCTCACTATCAC+CGG - chr6_1:19025473-19025492 None:intergenic 35.0%
! TTCTGTTTTCTTCTGTTCAC+CGG - chr6_1:19025521-19025540 None:intergenic 35.0%
ACAACGCGAACATATAGAAA+TGG - chr6_1:19025817-19025836 None:intergenic 35.0%
TCTATATGTTCGCGTTGTTA+AGG + chr6_1:19025819-19025838 Msa0878280:CDS 35.0%
! CAAATAACGGAGATTTCACT+CGG + chr6_1:19026045-19026064 Msa0878280:CDS 35.0%
TCATGATTGCTGTATGGATT+GGG + chr6_1:19026175-19026194 Msa0878280:CDS 35.0%
GAGTCCTGAACTTTATGTTA+AGG + chr6_1:19026374-19026393 Msa0878280:CDS 35.0%
TGAGCCTTAACATAAAGTTC+AGG - chr6_1:19026381-19026400 None:intergenic 35.0%
ATGACTAGAAACGGTTCAAA+CGG - chr6_1:19026498-19026517 None:intergenic 35.0%
TCGAGATGGTTTAATCTTTG+TGG + chr6_1:19026615-19026634 Msa0878280:CDS 35.0%
GTTTAATCTTTGTGGTTCAG+AGG + chr6_1:19026623-19026642 Msa0878280:CDS 35.0%
GAGGAAAATCTTTCTTACAC+AGG + chr6_1:19026642-19026661 Msa0878280:CDS 35.0%
ACTTCAAGTAAACCAATTGG+AGG - chr6_1:19027171-19027190 None:intergenic 35.0%
CCAACTTCAAGTAAACCAAT+TGG - chr6_1:19027174-19027193 None:intergenic 35.0%
! CCAATTGGTTTACTTGAAGT+TGG + chr6_1:19027171-19027190 Msa0878280:CDS 35.0%
ATGGAATGAGCAATACACAT+GGG + chr6_1:19027329-19027348 Msa0878280:CDS 35.0%
!!! TTGGTGTTTTCGATAATGGA+AGG + chr6_1:19027382-19027401 Msa0878280:CDS 35.0%
AGATGCTAGAGATGTTAGAA+TGG + chr6_1:19027413-19027432 Msa0878280:CDS 35.0%
GATGCTAGAGATGTTAGAAT+GGG + chr6_1:19027414-19027433 Msa0878280:CDS 35.0%
ATGCTAGAGATGTTAGAATG+GGG + chr6_1:19027415-19027434 Msa0878280:CDS 35.0%
AATAAGAATTCACGTAGACG+CGG - chr6_1:19027476-19027495 None:intergenic 35.0%
TTCATGGTTGAGTTTAATGC+AGG + chr6_1:19027569-19027588 Msa0878280:CDS 35.0%
TTATGTTAAACCATTCGGTC+CGG + chr6_1:19027623-19027642 Msa0878280:CDS 35.0%
TGAGGAAAAGTAAAGCGAAT+TGG + chr6_1:19027772-19027791 Msa0878280:CDS 35.0%
! GCGAATTGGTTTAGATTAGT+TGG + chr6_1:19027786-19027805 Msa0878280:CDS 35.0%
GAACTTGATGAAGAGTTTGA+TGG + chr6_1:19028050-19028069 Msa0878280:CDS 35.0%
!! TTGATGGTTTTCCAACAATG+AGG + chr6_1:19028066-19028085 Msa0878280:CDS 35.0%
!! GATTGGAAGCTTTGTTTAGT+TGG + chr6_1:19028183-19028202 Msa0878280:CDS 35.0%
GATGTTTGCGATATTCTGTT+TGG + chr6_1:19028226-19028245 Msa0878280:CDS 35.0%
!! ATTCTGTTTGGTAATGTCGT+TGG + chr6_1:19028238-19028257 Msa0878280:CDS 35.0%
! GTTTAAAGGGTTTGTGCTTT+TGG + chr6_1:19028277-19028296 Msa0878280:CDS 35.0%
AAGAAGTTCACGAAAACAGA+CGG - chr6_1:19028347-19028366 None:intergenic 35.0%
! CTGTTTTCGTGAACTTCTTT+CGG + chr6_1:19028348-19028367 Msa0878280:CDS 35.0%
!!! AGGTGGCACTGTTTTTTTAA+TGG + chr6_1:19028459-19028478 Msa0878280:three_prime_UTR 35.0%
! TTTGAGCTACTTTGGGAAAA+TGG + chr6_1:19028533-19028552 Msa0878280:three_prime_UTR 35.0%
!! AATGAGGAAAAAGGTGTTCT+TGG + chr6_1:19028563-19028582 Msa0878280:three_prime_UTR 35.0%
!! AAAAAGGTGTTCTTGGTATG+TGG + chr6_1:19028570-19028589 Msa0878280:three_prime_UTR 35.0%
GTGGTCTGAATGTGTATAAA+AGG + chr6_1:19028589-19028608 Msa0878280:three_prime_UTR 35.0%
AGGGTCTGAATGTGTATAAA+AGG + chr6_1:19028609-19028628 Msa0878280:three_prime_UTR 35.0%
! TAAAAGGTTACCGTTGATTG+TGG + chr6_1:19028625-19028644 Msa0878280:three_prime_UTR 35.0%
CTATTTCAGTCCACAATCAA+CGG - chr6_1:19028638-19028657 None:intergenic 35.0%
TAGAGAGAACAGAACAGCAA+CGG - chr6_1:19024898-19024917 None:intergenic 40.0%
AAGAACCTAATGCCGAAAGA+CGG + chr6_1:19025031-19025050 Msa0878280:CDS 40.0%
!!! TACGCGATCGTTGATTTTGA+CGG + chr6_1:19025073-19025092 Msa0878280:CDS 40.0%
!! AGGTCATTGACTCTTGATCA+AGG - chr6_1:19025171-19025190 None:intergenic 40.0%
! GGAAGCACGTTTGTGAAAAA+CGG + chr6_1:19025274-19025293 Msa0878280:CDS 40.0%
GAAAAAAGACGAGAATCCAC+CGG + chr6_1:19025483-19025502 Msa0878280:CDS 40.0%
! TCTGCTGGAGTTTCTTCTTT+TGG - chr6_1:19025568-19025587 None:intergenic 40.0%
TGAAGGTAAAGATTGGGATC+AGG + chr6_1:19025930-19025949 Msa0878280:CDS 40.0%
GTTTCAAGCGTATACCATTG+CGG - chr6_1:19026132-19026151 None:intergenic 40.0%
GCAATGGTATACGCTTGAAA+CGG + chr6_1:19026131-19026150 Msa0878280:CDS 40.0%
GCTTGAAACGGAAAATTCAC+CGG + chr6_1:19026143-19026162 Msa0878280:CDS 40.0%
CTTGAAACGGAAAATTCACC+GGG + chr6_1:19026144-19026163 Msa0878280:CDS 40.0%
ATGACGTCATGATTGCTGTA+TGG + chr6_1:19026169-19026188 Msa0878280:CDS 40.0%
GTCATGATTGCTGTATGGAT+TGG + chr6_1:19026174-19026193 Msa0878280:CDS 40.0%
TTTATCTTTCTCCCAAGCTG+TGG + chr6_1:19026274-19026293 Msa0878280:CDS 40.0%
AGTCTCAAATACCACAGCTT+GGG - chr6_1:19026288-19026307 None:intergenic 40.0%
TAGTCTCAAATACCACAGCT+TGG - chr6_1:19026289-19026308 None:intergenic 40.0%
! GCTGTGGTATTTGAGACTAA+CGG + chr6_1:19026290-19026309 Msa0878280:CDS 40.0%
CTTTATGTTAAGGCTCAGCT+TGG + chr6_1:19026384-19026403 Msa0878280:CDS 40.0%
!!! GGTGCACAGGTTTTTAAAAC+CGG + chr6_1:19026405-19026424 Msa0878280:CDS 40.0%
!!! CACAGGTTTTTAAAACCGGT+CGG + chr6_1:19026409-19026428 Msa0878280:CDS 40.0%
!!! GTTTTTAAAACCGGTCGGAT+TGG + chr6_1:19026414-19026433 Msa0878280:CDS 40.0%
!! TCGGATTGGTTTAGTCAACT+CGG + chr6_1:19026428-19026447 Msa0878280:CDS 40.0%
TCGAGAGGAGATTAGATGAT+CGG + chr6_1:19026580-19026599 Msa0878280:CDS 40.0%
AAATGTCAATTAGTGGGAGC+AGG - chr6_1:19027025-19027044 None:intergenic 40.0%
! GCTCCCACTAATTGACATTT+TGG + chr6_1:19027025-19027044 Msa0878280:intron 40.0%
! TTTTGGATTTGTCTCTGCAC+AGG + chr6_1:19027042-19027061 Msa0878280:intron 40.0%
CATATCCGTGCTTGTTTAGA+AGG + chr6_1:19027072-19027091 Msa0878280:CDS 40.0%
ATCCACCTTCTAAACAAGCA+CGG - chr6_1:19027080-19027099 None:intergenic 40.0%
TTACTTGAAGTTGGGATTCG+TGG + chr6_1:19027180-19027199 Msa0878280:CDS 40.0%
TGGAACAACTGATGCTTATG+TGG + chr6_1:19027245-19027264 Msa0878280:CDS 40.0%
AACAACTGATGCTTATGTGG+TGG + chr6_1:19027248-19027267 Msa0878280:CDS 40.0%
TGGCGAAATATGGTCCAAAA+TGG + chr6_1:19027268-19027287 Msa0878280:CDS 40.0%
GGCGAAATATGGTCCAAAAT+GGG + chr6_1:19027269-19027288 Msa0878280:CDS 40.0%
GAACTAGGACTATTGTAGAC+CGG + chr6_1:19027295-19027314 Msa0878280:CDS 40.0%
TGTATTGCTCATTCCATCTC+GGG - chr6_1:19027326-19027345 None:intergenic 40.0%
GTGTATTGCTCATTCCATCT+CGG - chr6_1:19027327-19027346 None:intergenic 40.0%
GATGGAATGAGCAATACACA+TGG + chr6_1:19027328-19027347 Msa0878280:CDS 40.0%
GGATGTTTATGATCCTTGCA+CGG + chr6_1:19027350-19027369 Msa0878280:CDS 40.0%
!! TCGTTGATTGTTTTACTGCC+AGG + chr6_1:19027495-19027514 Msa0878280:CDS 40.0%
!! TTGATTGTTTTACTGCCAGG+TGG + chr6_1:19027498-19027517 Msa0878280:CDS 40.0%
TATGTTAAACCATTCGGTCC+GGG + chr6_1:19027624-19027643 Msa0878280:CDS 40.0%
GGTTCAGTTCATGCTTGATT+CGG + chr6_1:19027731-19027750 Msa0878280:CDS 40.0%
!! TTGATTCGGATACTCATGTG+TGG + chr6_1:19027745-19027764 Msa0878280:CDS 40.0%
! GTTCGACGACTGTGTTTTAT+TGG + chr6_1:19027820-19027839 Msa0878280:CDS 40.0%
TGAACTAAAACCGTTGTTGC+CGG - chr6_1:19027873-19027892 None:intergenic 40.0%
TGAGGTTTAGGAACAGAATG+AGG + chr6_1:19027973-19027992 Msa0878280:CDS 40.0%
GAGGTTTAGGAACAGAATGA+GGG + chr6_1:19027974-19027993 Msa0878280:CDS 40.0%
! TTTTCCAACAATGAGGTCTG+TGG + chr6_1:19028073-19028092 Msa0878280:CDS 40.0%
!! TTCTATGCTGTGCCGTTTAA+AGG + chr6_1:19028263-19028282 Msa0878280:CDS 40.0%
!! TCTATGCTGTGCCGTTTAAA+GGG + chr6_1:19028264-19028283 Msa0878280:CDS 40.0%
!!! TGGCTGGGTTTTATTATCTG+AGG + chr6_1:19028297-19028316 Msa0878280:CDS 40.0%
! TTTATTATCTGAGGCATCCG+AGG + chr6_1:19028306-19028325 Msa0878280:CDS 40.0%
! GGAAAATGGTGCTGAAAATG+AGG + chr6_1:19028547-19028566 Msa0878280:three_prime_UTR 40.0%
! GGTGCTGAAAATGAGGAAAA+AGG + chr6_1:19028554-19028573 Msa0878280:three_prime_UTR 40.0%
CGACGGAAGTAGTTTCTGTA+AGG + chr6_1:19024981-19025000 Msa0878280:CDS 45.0%
ATTGATCTCCATCGTCTCAG+AGG - chr6_1:19025191-19025210 None:intergenic 45.0%
!! TTACCTGTTACCGATTCAGC+CGG + chr6_1:19025394-19025413 Msa0878280:CDS 45.0%
!! CTTTTCATCACCGGCTGAAT+CGG - chr6_1:19025407-19025426 None:intergenic 45.0%
GAAAGCTGAAGAGAAGTCAC+CGG + chr6_1:19025435-19025454 Msa0878280:CDS 45.0%
AACTCCAGCAGAGAAAACTC+CGG + chr6_1:19025576-19025595 Msa0878280:CDS 45.0%
ACATCCTTCGTTTCAGCTAC+CGG - chr6_1:19025664-19025683 None:intergenic 45.0%
TAGAGATCGAAGCAGAAGTG+CGG + chr6_1:19025768-19025787 Msa0878280:CDS 45.0%
ATAGTCCATTAGCACCGCAA+TGG + chr6_1:19026115-19026134 Msa0878280:CDS 45.0%
! GTATACCATTGCGGTGCTAA+TGG - chr6_1:19026123-19026142 None:intergenic 45.0%
GCAATCATGACGTCATTTCC+CGG - chr6_1:19026165-19026184 None:intergenic 45.0%
CGACTCCTGAAAAGCTTCAT+CGG - chr6_1:19026208-19026227 None:intergenic 45.0%
!! ATGAAGCTTTTCAGGAGTCG+TGG + chr6_1:19026208-19026227 Msa0878280:CDS 45.0%
TAAACTTTCGCTCGTGTCTC+CGG - chr6_1:19026258-19026277 None:intergenic 45.0%
ACTAACGGTTATCCAAACCC+AGG + chr6_1:19026305-19026324 Msa0878280:CDS 45.0%
CAAACCCAGGATTTACAGCT+GGG + chr6_1:19026318-19026337 Msa0878280:CDS 45.0%
CAAACCCAGCTGTAAATCCT+GGG - chr6_1:19026325-19026344 None:intergenic 45.0%
CAGGATTTACAGCTGGGTTT+GGG + chr6_1:19026324-19026343 Msa0878280:CDS 45.0%
GTTGACTAAACCAATCCGAC+CGG - chr6_1:19026427-19026446 None:intergenic 45.0%
!! CGGATTGGTTTAGTCAACTC+GGG + chr6_1:19026429-19026448 Msa0878280:CDS 45.0%
ACCAGATCTTCATTCCACGT+CGG - chr6_1:19026459-19026478 None:intergenic 45.0%
TGGGAAAACGAAGATCCATG+TGG + chr6_1:19026551-19026570 Msa0878280:CDS 45.0%
GAGGAGATTAGATGATCGGA+CGG + chr6_1:19026584-19026603 Msa0878280:CDS 45.0%
ATCCGTGCTTGTTTAGAAGG+TGG + chr6_1:19027075-19027094 Msa0878280:CDS 45.0%
TTAACTGCTTCGCAGAAGCA+CGG - chr6_1:19027143-19027162 None:intergenic 45.0%
CAGTTAACGAAGCCTCCAAT+TGG + chr6_1:19027156-19027175 Msa0878280:CDS 45.0%
TGGAGCAACGAATCTTCTTC+CGG + chr6_1:19027200-19027219 Msa0878280:CDS 45.0%
CTTCCGGTGAAAACGAAAGA+CGG + chr6_1:19027216-19027235 Msa0878280:CDS 45.0%
TTCCGGTGAAAACGAAAGAC+GGG + chr6_1:19027217-19027236 Msa0878280:CDS 45.0%
! GCTTATGTGGTGGCGAAATA+TGG + chr6_1:19027258-19027277 Msa0878280:CDS 45.0%
! GTCCAAAATGGGTTCGAACT+AGG + chr6_1:19027280-19027299 Msa0878280:CDS 45.0%
! GTCCTAGTTCGAACCCATTT+TGG - chr6_1:19027285-19027304 None:intergenic 45.0%
CATTCCATCTCGGGTTAAAC+CGG - chr6_1:19027317-19027336 None:intergenic 45.0%
GAATGGGGAAAATTCGTGTG+CGG + chr6_1:19027430-19027449 Msa0878280:CDS 45.0%
! CTCAAAACGTCTTGTTGACC+CGG - chr6_1:19027645-19027664 None:intergenic 45.0%
TAGTAACGGCTCGTTTAGCT+CGG + chr6_1:19027682-19027701 Msa0878280:CDS 45.0%
ATACTCATGTGTGGAGCATG+AGG + chr6_1:19027754-19027773 Msa0878280:CDS 45.0%
!! AATGAGGGTGCCAAAGAACA+TGG + chr6_1:19027989-19028008 Msa0878280:CDS 45.0%
ATCCTCGGATCCATGTTCTT+TGG - chr6_1:19028002-19028021 None:intergenic 45.0%
CAAACTTACCATGTCCACGT+AGG - chr6_1:19028027-19028046 None:intergenic 45.0%
CTACGTGGACATGGTAAGTT+TGG + chr6_1:19028025-19028044 Msa0878280:CDS 45.0%
ACTTCCACAGACCTCATTGT+TGG - chr6_1:19028080-19028099 None:intergenic 45.0%
AACAATGAGGTCTGTGGAAG+TGG + chr6_1:19028079-19028098 Msa0878280:CDS 45.0%
TGGTTCGAATCAGGTACGAT+AGG + chr6_1:19028099-19028118 Msa0878280:CDS 45.0%
GGTTCGAATCAGGTACGATA+GGG + chr6_1:19028100-19028119 Msa0878280:CDS 45.0%
! AAAGGGTTTGTGCTTTTGGC+TGG + chr6_1:19028281-19028300 Msa0878280:CDS 45.0%
!! AAGGGTTTGTGCTTTTGGCT+GGG + chr6_1:19028282-19028301 Msa0878280:CDS 45.0%
CTTGACCGTCTTTCGGCATT+AGG - chr6_1:19025039-19025058 None:intergenic 50.0%
CTAATGCCGAAAGACGGTCA+AGG + chr6_1:19025037-19025056 Msa0878280:CDS 50.0%
GCTGTTCCTTGACCGTCTTT+CGG - chr6_1:19025046-19025065 None:intergenic 50.0%
TCGAGTTTCTCGTCCCATTG+TGG - chr6_1:19025139-19025158 None:intergenic 50.0%
!! GTCAATGACCTCTGAGACGA+TGG + chr6_1:19025180-19025199 Msa0878280:CDS 50.0%
! CTCACTATCACCGGCTGATT+CGG - chr6_1:19025464-19025483 None:intergenic 50.0%
! GTTTTCTTCTGTTCACCGGC+TGG - chr6_1:19025517-19025536 None:intergenic 50.0%
ACCGGAGGTTGTTAATCCAC+CGG + chr6_1:19025642-19025661 Msa0878280:CDS 50.0%
!! ACCGGTGGATTAACAACCTC+CGG - chr6_1:19025646-19025665 None:intergenic 50.0%
AGTTCCGAAGAGAGTTCCAC+CGG + chr6_1:19026092-19026111 Msa0878280:CDS 50.0%
CTATCCGGTGGAACTCTCTT+CGG - chr6_1:19026099-19026118 None:intergenic 50.0%
!! TGCGGTGCTAATGGACTATC+CGG - chr6_1:19026114-19026133 None:intergenic 50.0%
! GCAAGCCGATGAAGCTTTTC+AGG + chr6_1:19026200-19026219 Msa0878280:CDS 50.0%
!! TTTTCAGGAGTCGTGGCAGT+CGG + chr6_1:19026215-19026234 Msa0878280:CDS 50.0%
GGATTCCGGTGGTTTGATAC+CGG + chr6_1:19026236-19026255 Msa0878280:CDS 50.0%
TGTCTCCGGTATCAAACCAC+CGG - chr6_1:19026244-19026263 None:intergenic 50.0%
CCAGCTGTAAATCCTGGGTT+TGG - chr6_1:19026320-19026339 None:intergenic 50.0%
CCAAACCCAGGATTTACAGC+TGG + chr6_1:19026317-19026336 Msa0878280:CDS 50.0%
CCAAACCCAGCTGTAAATCC+TGG - chr6_1:19026326-19026345 None:intergenic 50.0%
CCAGGATTTACAGCTGGGTT+TGG + chr6_1:19026323-19026342 Msa0878280:CDS 50.0%
GATTTACAGCTGGGTTTGGG+TGG + chr6_1:19026327-19026346 Msa0878280:CDS 50.0%
AGGACTCCGAACCTTAGGTT+CGG - chr6_1:19026361-19026380 None:intergenic 50.0%
AGTTCAGGACTCCGAACCTT+AGG - chr6_1:19026366-19026385 None:intergenic 50.0%
TCCGACGTGGAATGAAGATC+TGG + chr6_1:19026455-19026474 Msa0878280:CDS 50.0%
GGACGGATGTGAAATCGAGA+TGG + chr6_1:19026601-19026620 Msa0878280:CDS 50.0%
GGATTTGTCTCTGCACAGGT+AGG + chr6_1:19027046-19027065 Msa0878280:intron 50.0%
! GTCCCGTCTTTCGTTTTCAC+CGG - chr6_1:19027222-19027241 None:intergenic 50.0%
AAAACGAAAGACGGGACACG+TGG + chr6_1:19027225-19027244 Msa0878280:CDS 50.0%
! TAGACCGGTTTAACCCGAGA+TGG + chr6_1:19027310-19027329 Msa0878280:CDS 50.0%
CCAATTGTGAGAACCGTGCA+AGG - chr6_1:19027366-19027385 None:intergenic 50.0%
CCTTGCACGGTTCTCACAAT+TGG + chr6_1:19027363-19027382 Msa0878280:CDS 50.0%
! TCGTTTAGCTCGGTCTGAAC+CGG + chr6_1:19027692-19027711 Msa0878280:CDS 50.0%
ACCACTTCTGAACCCAAAGC+CGG - chr6_1:19027714-19027733 None:intergenic 50.0%
GTTAGATGGGATTCGCACGT+GGG + chr6_1:19027842-19027861 Msa0878280:CDS 50.0%
TGCCAAAGAACATGGATCCG+AGG + chr6_1:19027997-19028016 Msa0878280:CDS 50.0%
ATGTCCACGTAGGACATCCT+CGG - chr6_1:19028017-19028036 None:intergenic 50.0%
CTGTGGAAGTGGTTCGAATC+AGG + chr6_1:19028090-19028109 Msa0878280:CDS 50.0%
! GGGAGGGCACAAAGTTTGAT+TGG + chr6_1:19028137-19028156 Msa0878280:CDS 50.0%
AGCTTCCAATCTCTCACCCT+GGG - chr6_1:19028174-19028193 None:intergenic 50.0%
AAGCTTCCAATCTCTCACCC+TGG - chr6_1:19028175-19028194 None:intergenic 50.0%
CAAACATCGCTGTAGCACGT+GGG - chr6_1:19028214-19028233 None:intergenic 50.0%
! TCACCGGCTGAATCGGTAAC+AGG - chr6_1:19025400-19025419 None:intergenic 55.0%
TCACCGGTAACCGAATCAGC+CGG + chr6_1:19025451-19025470 Msa0878280:CDS 55.0%
!! TCACCGGCTGATTCGGTTAC+CGG - chr6_1:19025457-19025476 None:intergenic 55.0%
! CTTCTGTTCACCGGCTGGTT+CGG - chr6_1:19025512-19025531 None:intergenic 55.0%
AGCAGAGAAAACTCCGGCAC+CGG + chr6_1:19025582-19025601 Msa0878280:CDS 55.0%
!! GGATTCGCCGGTGGATTTTC+CGG - chr6_1:19025604-19025623 None:intergenic 55.0%
AAATCCACCGGCGAATCCAC+CGG + chr6_1:19025606-19025625 Msa0878280:CDS 55.0%
TTAACAACCTCCGGTGCAGG+CGG - chr6_1:19025637-19025656 None:intergenic 55.0%
GGATTAACAACCTCCGGTGC+AGG - chr6_1:19025640-19025659 None:intergenic 55.0%
TCCACCGGTAGCTGAAACGA+AGG + chr6_1:19025657-19025676 Msa0878280:CDS 55.0%
TCCTTCGTTTCAGCTACCGG+TGG - chr6_1:19025661-19025680 None:intergenic 55.0%
!! GGTGCTAATGGACTATCCGG+TGG - chr6_1:19026111-19026130 None:intergenic 55.0%
ACAGCTGGGTTTGGGTGGTT+TGG + chr6_1:19026332-19026351 Msa0878280:CDS 55.0%
CAGCTGGGTTTGGGTGGTTT+GGG + chr6_1:19026333-19026352 Msa0878280:CDS 55.0%
! TGGTTTGGGCTCCGAACCTA+AGG + chr6_1:19026347-19026366 Msa0878280:CDS 55.0%
TGGGCTCCGAACCTAAGGTT+CGG + chr6_1:19026352-19026371 Msa0878280:CDS 55.0%
!! TAAGGCTCAGCTTGGTGCAC+AGG + chr6_1:19026392-19026411 Msa0878280:CDS 55.0%
TCAACTCGGGTAATCCGACG+TGG + chr6_1:19026442-19026461 Msa0878280:CDS 55.0%
! TTTTACTGCCAGGTGGTGCG+AGG + chr6_1:19027505-19027524 Msa0878280:CDS 55.0%
TCTTGTTGACCCGGACCGAA+TGG - chr6_1:19027636-19027655 None:intergenic 55.0%
!! ACCGGCTTTGGGTTCAGAAG+TGG + chr6_1:19027710-19027729 Msa0878280:CDS 55.0%
GGTTAGATGGGATTCGCACG+TGG + chr6_1:19027841-19027860 Msa0878280:CDS 55.0%
GATTCGCACGTGGGTGAATC+CGG + chr6_1:19027851-19027870 Msa0878280:CDS 55.0%
GTGGGTGAATCCGGCAACAA+CGG + chr6_1:19027860-19027879 Msa0878280:CDS 55.0%
GAGGATGTCCTACGTGGACA+TGG + chr6_1:19028016-19028035 Msa0878280:CDS 55.0%
GCAAACATCGCTGTAGCACG+TGG - chr6_1:19028215-19028234 None:intergenic 55.0%
GGCATGTCACCACGAAACCT+CGG - chr6_1:19028326-19028345 None:intergenic 55.0%
!! TCACCGGCTGGTTCGGTAAC+CGG - chr6_1:19025505-19025524 None:intergenic 60.0%
!! GGTGCCGGAGTTTTCTCTGC+TGG - chr6_1:19025583-19025602 None:intergenic 60.0%
! TCCGGCACCGGAAAATCCAC+CGG + chr6_1:19025594-19025613 Msa0878280:CDS 60.0%
! GGAATTGCCGGTGGATTCGC+CGG - chr6_1:19025616-19025635 None:intergenic 60.0%
GAGTCGTGGCAGTCGGATTC+CGG + chr6_1:19026222-19026241 Msa0878280:CDS 60.0%
!! TCCATGTGGCGTCGATCGAG+AGG + chr6_1:19026565-19026584 Msa0878280:CDS 60.0%
TCCTCTCGATCGACGCCACA+TGG - chr6_1:19026569-19026588 None:intergenic 60.0%
CCAGGTGGTGCGAGGAGAAT+GGG + chr6_1:19027513-19027532 Msa0878280:CDS 60.0%
! AGCTCGGTCTGAACCGGCTT+TGG + chr6_1:19027698-19027717 Msa0878280:CDS 60.0%
! GCTCGGTCTGAACCGGCTTT+GGG + chr6_1:19027699-19027718 Msa0878280:CDS 60.0%
GGATCCGAGGATGTCCTACG+TGG + chr6_1:19028010-19028029 Msa0878280:CDS 60.0%
CGATAGGGTGCGTGCTCTTG+CGG + chr6_1:19028115-19028134 Msa0878280:CDS 60.0%
GATAGGGTGCGTGCTCTTGC+GGG + chr6_1:19028116-19028135 Msa0878280:CDS 60.0%
ATAGGGTGCGTGCTCTTGCG+GGG + chr6_1:19028117-19028136 Msa0878280:CDS 60.0%
ATTGGCGACGTTGCAGCCCA+GGG + chr6_1:19028155-19028174 Msa0878280:CDS 60.0%
TGCAGCCCAGGGTGAGAGAT+TGG + chr6_1:19028166-19028185 Msa0878280:CDS 60.0%
! CTGAGGCATCCGAGGTTTCG+TGG + chr6_1:19028314-19028333 Msa0878280:CDS 60.0%
! CCACCGGTTACCGAACCAGC+CGG + chr6_1:19025499-19025518 Msa0878280:CDS 65.0%
!! GCCGGTGGATTTTCCGGTGC+CGG - chr6_1:19025598-19025617 None:intergenic 65.0%
! ATTGCCGGTGGATTCGCCGG+TGG - chr6_1:19025613-19025632 None:intergenic 65.0%
ACCGGCAATTCCGCCTGCAC+CGG + chr6_1:19025624-19025643 Msa0878280:CDS 65.0%
TCCGGTGCAGGCGGAATTGC+CGG - chr6_1:19025628-19025647 None:intergenic 65.0%
TCGTGGCAGTCGGATTCCGG+TGG + chr6_1:19026225-19026244 Msa0878280:CDS 65.0%
GCCAGGTGGTGCGAGGAGAA+TGG + chr6_1:19027512-19027531 Msa0878280:CDS 65.0%
CCCATTCTCCTCGCACCACC+TGG - chr6_1:19027516-19027535 None:intergenic 65.0%
GATTGGCGACGTTGCAGCCC+AGG + chr6_1:19028154-19028173 Msa0878280:CDS 65.0%
!! CCGGCTGGTTCGGTAACCGG+TGG - chr6_1:19025502-19025521 None:intergenic 70.0%
GGTGCAGGCGGAATTGCCGG+TGG - chr6_1:19025625-19025644 None:intergenic 70.0%
GGCAATTCCGCCTGCACCGG+AGG + chr6_1:19025627-19025646 Msa0878280:CDS 70.0%
GGTGCGTGCTCTTGCGGGGA+GGG + chr6_1:19028121-19028140 Msa0878280:CDS 70.0%
GGGTGCGTGCTCTTGCGGGG+AGG + chr6_1:19028120-19028139 Msa0878280:CDS 75.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 19024786 19028659 19024786 ID=Msa0878280;Name=Msa0878280
chr6_1 mRNA 19024786 19028659 19024786 ID=Msa0878280-mRNA-1;Parent=Msa0878280;Name=Msa0878280-mRNA-1;_AED=0.00;_eAED=0.00;_QI=188|1|1|1|1|1|2|256|1009
chr6_1 exon 19024786 19026663 19024786 ID=Msa0878280-mRNA-1:exon:5111;Parent=Msa0878280-mRNA-1
chr6_1 exon 19027064 19028659 19027064 ID=Msa0878280-mRNA-1:exon:5112;Parent=Msa0878280-mRNA-1
chr6_1 five_prime_UTR 19024786 19024973 19024786 ID=Msa0878280-mRNA-1:five_prime_utr;Parent=Msa0878280-mRNA-1
chr6_1 CDS 19024974 19026663 19024974 ID=Msa0878280-mRNA-1:cds;Parent=Msa0878280-mRNA-1
chr6_1 CDS 19027064 19028403 19027064 ID=Msa0878280-mRNA-1:cds;Parent=Msa0878280-mRNA-1
chr6_1 three_prime_UTR 19028404 19028659 19028404 ID=Msa0878280-mRNA-1:three_prime_utr;Parent=Msa0878280-mRNA-1
Gene Sequence

>Msa0878280

ATGACTACGACGGAAGTAGTTTCTGTAAGGAAACTAATCGTCGAAGTCATCAATGCAAAGAACCTAATGCCGAAAGACGGTCAAGGAACAGCGAGCGCTTACGCGATCGTTGATTTTGACGGTCAAAGAAAGCGAACAAAGACAAAATCAAGAGATTTGAATCCACAATGGGACGAGAAACTCGAGTTTTTAGTCCTTGATCAAGAGTCAATGACCTCTGAGACGATGGAGATCAATCTTTACAACGACAAAAAAACAACTGGGAAGAGAAGTACTTTTTTAGGAAAAGTTAAAATCTCTGGAAGCACGTTTGTGAAAAACGGTGAAGAAGTGATTGTTTACTATCCGTTAGAGAAAAGGAGCGTTTTCTCTCAGATTAAAGGTGAACTTGGTTTGAAAATTTCTTACGTGGATGAAATTTTACCTGTTACCGATTCAGCCGGTGATGAAAAGAAAGATGAGAAAGCTGAAGAGAAGTCACCGGTAACCGAATCAGCCGGTGATAGTGAGAAAAAAGACGAGAATCCACCGGTTACCGAACCAGCCGGTGAACAGAAGAAAACAGAAGAAAATACAAAAGAAGAGGAAAAACCAAAAGAAGAAACTCCAGCAGAGAAAACTCCGGCACCGGAAAATCCACCGGCGAATCCACCGGCAATTCCGCCTGCACCGGAGGTTGTTAATCCACCGGTAGCTGAAACGAAGGATGTGAAAATCAAAGAGAAACAATATGAAATTGTTCAGAAACGAGATGATGTGATCAATGTGAGTGATCACGAGCTTCGATCTCTTAGTAGAGATCGAAGCAGAAGTGCGGCATACGATCTAGTTGATCGTATGCCATTTCTATATGTTCGCGTTGTTAAGGCGAAGCGATGTGAATCAAAAGCTGAATCTGTGAAGCTTTTTTCAAAGCTTGTGATTGGAACTCATAGTGTGAGAACAAAGAGTGAAAATGAAGGTAAAGATTGGGATCAGGTTTTCGCTTTTGATAAAGAAGGATTGAATTCAACTTCTTTAGAAGTTTCTGTTTGGTTAGAATCAGAATCAGAATTAGAAAACAAAGAGAAGCAAATAACGGAGATTTCACTCGGTACAGTGTCGTTTGATTTGCAAGAAGTTCCGAAGAGAGTTCCACCGGATAGTCCATTAGCACCGCAATGGTATACGCTTGAAACGGAAAATTCACCGGGAAATGACGTCATGATTGCTGTATGGATTGGGACGCAAGCCGATGAAGCTTTTCAGGAGTCGTGGCAGTCGGATTCCGGTGGTTTGATACCGGAGACACGAGCGAAAGTTTATCTTTCTCCCAAGCTGTGGTATTTGAGACTAACGGTTATCCAAACCCAGGATTTACAGCTGGGTTTGGGTGGTTTGGGCTCCGAACCTAAGGTTCGGAGTCCTGAACTTTATGTTAAGGCTCAGCTTGGTGCACAGGTTTTTAAAACCGGTCGGATTGGTTTAGTCAACTCGGGTAATCCGACGTGGAATGAAGATCTGGTTTTTGTAGCTTCTGAGCCGTTTGAACCGTTTCTAGTCATTACATTAGAAGATGTTTCGAATTCAAGATCAATTGGGAAAACGAAGATCCATGTGGCGTCGATCGAGAGGAGATTAGATGATCGGACGGATGTGAAATCGAGATGGTTTAATCTTTGTGGTTCAGAGGAAAATCTTTCTTACACAGGTAGGATACATATCCGTGCTTGTTTAGAAGGTGGATATCATGTGATAGATGAAGCAGCTCATGTGACTAGCGATGTCCGTGCTTCTGCGAAGCAGTTAACGAAGCCTCCAATTGGTTTACTTGAAGTTGGGATTCGTGGAGCAACGAATCTTCTTCCGGTGAAAACGAAAGACGGGACACGTGGAACAACTGATGCTTATGTGGTGGCGAAATATGGTCCAAAATGGGTTCGAACTAGGACTATTGTAGACCGGTTTAACCCGAGATGGAATGAGCAATACACATGGGATGTTTATGATCCTTGCACGGTTCTCACAATTGGTGTTTTCGATAATGGAAGGTTTCAGAAAGATGCTAGAGATGTTAGAATGGGGAAAATTCGTGTGCGGTTGTCTACACTAGACACTAACCGCGTCTACGTGAATTCTTATTCGTTGATTGTTTTACTGCCAGGTGGTGCGAGGAGAATGGGTGAGATTGAAATCGCAGTTAGATTTTCATGTTCTTCATGGTTGAGTTTAATGCAGGCTTATACAAGTCCAATTCTACCAAGAATGCATTATGTTAAACCATTCGGTCCGGGTCAACAAGACGTTTTGAGACAAACTGCTATGAAGATAGTAACGGCTCGTTTAGCTCGGTCTGAACCGGCTTTGGGTTCAGAAGTGGTTCAGTTCATGCTTGATTCGGATACTCATGTGTGGAGCATGAGGAAAAGTAAAGCGAATTGGTTTAGATTAGTTGGATTTTTGTCACGTTCGACGACTGTGTTTTATTGGTTAGATGGGATTCGCACGTGGGTGAATCCGGCAACAACGGTTTTAGTTCACGCGCTTCTCATAGCGATTGTGTTCTGTCCTTATTTGATTCTACCAACAGTTTTTATGTATGCTTTCTTGATTCTGATTTTGAGGTTTAGGAACAGAATGAGGGTGCCAAAGAACATGGATCCGAGGATGTCCTACGTGGACATGGTAAGTTTGGATGAACTTGATGAAGAGTTTGATGGTTTTCCAACAATGAGGTCTGTGGAAGTGGTTCGAATCAGGTACGATAGGGTGCGTGCTCTTGCGGGGAGGGCACAAAGTTTGATTGGCGACGTTGCAGCCCAGGGTGAGAGATTGGAAGCTTTGTTTAGTTGGAGAGACCCACGTGCTACAGCGATGTTTGCGATATTCTGTTTGGTAATGTCGTTGGTTTTCTATGCTGTGCCGTTTAAAGGGTTTGTGCTTTTGGCTGGGTTTTATTATCTGAGGCATCCGAGGTTTCGTGGTGACATGCCGTCTGTTTTCGTGAACTTCTTTCGGAGACTTCCGTCGTTTTCTGATCAGATTATGTAA

Protein sequence

>Msa0878280

MTTTEVVSVRKLIVEVINAKNLMPKDGQGTASAYAIVDFDGQRKRTKTKSRDLNPQWDEKLEFLVLDQESMTSETMEINLYNDKKTTGKRSTFLGKVKISGSTFVKNGEEVIVYYPLEKRSVFSQIKGELGLKISYVDEILPVTDSAGDEKKDEKAEEKSPVTESAGDSEKKDENPPVTEPAGEQKKTEENTKEEEKPKEETPAEKTPAPENPPANPPAIPPAPEVVNPPVAETKDVKIKEKQYEIVQKRDDVINVSDHELRSLSRDRSRSAAYDLVDRMPFLYVRVVKAKRCESKAESVKLFSKLVIGTHSVRTKSENEGKDWDQVFAFDKEGLNSTSLEVSVWLESESELENKEKQITEISLGTVSFDLQEVPKRVPPDSPLAPQWYTLETENSPGNDVMIAVWIGTQADEAFQESWQSDSGGLIPETRAKVYLSPKLWYLRLTVIQTQDLQLGLGGLGSEPKVRSPELYVKAQLGAQVFKTGRIGLVNSGNPTWNEDLVFVASEPFEPFLVITLEDVSNSRSIGKTKIHVASIERRLDDRTDVKSRWFNLCGSEENLSYTGRIHIRACLEGGYHVIDEAAHVTSDVRASAKQLTKPPIGLLEVGIRGATNLLPVKTKDGTRGTTDAYVVAKYGPKWVRTRTIVDRFNPRWNEQYTWDVYDPCTVLTIGVFDNGRFQKDARDVRMGKIRVRLSTLDTNRVYVNSYSLIVLLPGGARRMGEIEIAVRFSCSSWLSLMQAYTSPILPRMHYVKPFGPGQQDVLRQTAMKIVTARLARSEPALGSEVVQFMLDSDTHVWSMRKSKANWFRLVGFLSRSTTVFYWLDGIRTWVNPATTVLVHALLIAIVFCPYLILPTVFMYAFLILILRFRNRMRVPKNMDPRMSYVDMVSLDELDEEFDGFPTMRSVEVVRIRYDRVRALAGRAQSLIGDVAAQGERLEALFSWRDPRATAMFAIFCLVMSLVFYAVPFKGFVLLAGFYYLRHPRFRGDMPSVFVNFFRRLPSFSDQIM*