AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1058760


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1058760 MtrunA17_Chr7g0257041 98.913 368 4 0 69 436 26 393 0.0 743
Msa1058760 MtrunA17_Chr2g0299491 51.724 319 151 3 108 425 61 377 1.46e-103 314
Msa1058760 MtrunA17_Chr4g0071061 52.424 330 154 3 108 436 55 382 8.98e-100 304
Msa1058760 MtrunA17_Chr8g0358881 37.500 328 194 7 104 427 61 381 9.14e-57 192
Msa1058760 MtrunA17_Chr2g0301341 73.016 63 12 1 6 68 30 87 6.08e-22 91.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1058760 AT3G10140.1 60.665 361 139 2 68 428 22 379 6.30e-141 408
Msa1058760 AT2G19490.1 51.506 332 150 4 108 430 56 385 6.98e-101 308
Msa1058760 AT1G79050.1 38.095 357 210 8 85 436 56 406 2.89e-58 197
Msa1058760 AT3G32920.1 52.727 220 81 5 133 351 3 200 3.05e-54 180
Msa1058760 AT1G79050.2 41.392 273 151 6 85 354 56 322 5.64e-53 181
Msa1058760 AT3G32920.5 54.706 170 60 3 133 301 3 156 4.98e-42 147
Msa1058760 AT3G32920.3 52.349 149 54 3 133 280 3 135 6.29e-31 118
Msa1058760 AT3G32920.2 52.349 149 54 3 133 280 3 135 6.29e-31 118
Msa1058760 AT3G32920.4 61.333 75 27 2 207 280 9 82 2.20e-13 67.8

Find 84 sgRNAs with CRISPR-Local

Find 583 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTAGGATTGTTGAAATTTA+TGG 0.128020 7_2:-43850980 Msa1058760:CDS
TTGAAACCTGCTTATTTATT+AGG 0.148245 7_2:-43845386 Msa1058760:three_prime_UTR
AGTGATGACAATTCTTATTT+TGG 0.153088 7_2:-43852282 Msa1058760:CDS
ATTGATCAAGTTCGCATTTC+GGG 0.189519 7_2:+43849274 None:intergenic
ATCACATAATGTCTCCAATT+TGG 0.210153 7_2:+43848387 None:intergenic
TAGACCATCCATGGAAAATT+TGG 0.229461 7_2:+43848412 None:intergenic
GCTATCATTGTGGAAGCTTT+TGG 0.289850 7_2:-43852402 Msa1058760:CDS
GCAGCTTCTCTACTAGTAAA+AGG 0.322200 7_2:+43848524 None:intergenic
AGATTTAGTCCAAAAGCATT+TGG 0.322232 7_2:-43849029 Msa1058760:CDS
GATTTAGTCCAAAAGCATTT+GGG 0.325462 7_2:-43849028 Msa1058760:CDS
AATCAAAGACCTCTGATTCT+TGG 0.327550 7_2:+43848606 None:intergenic
TTTCAACAGGTTCTTCCTTC+AGG 0.327763 7_2:-43855653 Msa1058760:intron
AATTGATCAAGTTCGCATTT+CGG 0.336745 7_2:+43849273 None:intergenic
CTTGATATAGCTCTTGGAAT+TGG 0.341055 7_2:-43851313 Msa1058760:CDS
CCATGGCTTTCATCTGCAAC+TGG 0.343641 7_2:-43855678 Msa1058760:CDS
AGAATCAGAGGTCTTTGATT+TGG 0.344296 7_2:-43848603 Msa1058760:CDS
GCTGAACTGGGTATCAAGTT+TGG 0.348562 7_2:-43848641 Msa1058760:CDS
TGATTCTCTTAATGTGGTTA+AGG 0.369379 7_2:-43852319 Msa1058760:CDS
ATGGATGGTCTAAGCCAAAT+TGG 0.374989 7_2:-43848401 Msa1058760:three_prime_UTR
CCTTTCACTTGTGGAGTCAA+TGG 0.382583 7_2:-43849952 Msa1058760:CDS
AAATGCGAACTTGATCAATT+AGG 0.383682 7_2:-43849270 Msa1058760:CDS
TCTGCAACTGGGATTTCAAC+AGG 0.414825 7_2:-43855666 Msa1058760:CDS
ACATTAGTATTGCTTTCAAT+AGG 0.415978 7_2:-43848336 Msa1058760:three_prime_UTR
TTGAAGCTTGATATAGCTCT+TGG 0.416783 7_2:-43851319 Msa1058760:CDS
TTTGATTTGGCTTGTGAACA+TGG 0.422308 7_2:-43848590 Msa1058760:CDS
GTTTCTAAAACACATATCAT+AGG 0.423022 7_2:+43852356 None:intergenic
GATTTGTGACAAGTTAGTTA+TGG 0.423315 7_2:-43848474 Msa1058760:CDS
CATCTGGTGTTTCAGGTTGA+GGG 0.426869 7_2:-43848722 Msa1058760:intron
CGTTTGCGACTTTCAAGAAT+GGG 0.430058 7_2:-43848942 Msa1058760:CDS
ATAAATAAGCAGGTTTCAAA+TGG 0.432475 7_2:+43845390 None:intergenic
TTTACATCGCATGTTTCAAA+TGG 0.438444 7_2:+43845311 None:intergenic
GAGCTTCTTTAATAATTTGA+AGG 0.439836 7_2:+43850927 None:intergenic
AAGAGCTATATCAAGCTTCA+AGG 0.445371 7_2:+43851321 None:intergenic
TTTAAGTTACTGGAATTGTC+AGG 0.452483 7_2:-43848281 Msa1058760:three_prime_UTR
ATTAAAGAAGCTCAAAAGCT+TGG 0.461398 7_2:-43850917 Msa1058760:CDS
CTTTCACTTGTGGAGTCAAT+GGG 0.464147 7_2:-43849951 Msa1058760:CDS
AATCAGGATTAGAGATAAGA+AGG 0.474040 7_2:+43849913 None:intergenic
GATATAGCTCTTGGAATTGG+AGG 0.476573 7_2:-43851310 Msa1058760:CDS
CTGCTGCTTTGACATCATCA+TGG 0.480465 7_2:+43851464 None:intergenic
GCTTCCACAATGATAGCATC+AGG 0.483771 7_2:+43852408 None:intergenic
GAGGGAAACTACTTCATTGA+AGG 0.484832 7_2:-43848551 Msa1058760:CDS
TCGTTTGCGACTTTCAAGAA+TGG 0.488748 7_2:-43848943 Msa1058760:CDS
TGCATTAGACCTTTCACTTG+TGG 0.489679 7_2:-43849961 Msa1058760:CDS
AGAGAAATAATGACCAGGAT+TGG 0.498932 7_2:-43851724 Msa1058760:CDS
GTATTTCCTAATAAATAAGC+AGG 0.502500 7_2:+43845380 None:intergenic
ACCATCCATGGAAAATTTGG+AGG 0.504360 7_2:+43848415 None:intergenic
CTGGGTATCAAGTTTGGAAG+AGG 0.509214 7_2:-43848635 Msa1058760:CDS
ACCTGCTCGCTTTCTACTAC+AGG 0.511329 7_2:-43851694 Msa1058760:intron
AATTTGGCTTAGACCATCCA+TGG 0.520387 7_2:+43848403 None:intergenic
TATGCCAATGCGGTATCTAC+AGG 0.522074 7_2:-43851346 Msa1058760:CDS
TGCTGAAAATTTGTTGAGCA+TGG 0.528054 7_2:-43849889 Msa1058760:CDS
AAAGAAGCTCAAAAGCTTGG+AGG 0.529484 7_2:-43850914 Msa1058760:intron
GCAGGTGTTTACACCAATCC+TGG 0.533166 7_2:+43851711 None:intergenic
AGCTTCTTTAATAATTTGAA+GGG 0.537092 7_2:+43850928 None:intergenic
CATGGCTTTCATCTGCAACT+GGG 0.541332 7_2:-43855677 Msa1058760:CDS
AATTAAGAGAGTTTGGGAGC+GGG 0.550676 7_2:+43849176 None:intergenic
AAATTAAGAGAGTTTGGGAG+CGG 0.553612 7_2:+43849175 None:intergenic
ATTTATGGACGAGAAGCAGC+TGG 0.567692 7_2:-43850965 Msa1058760:CDS
GTTTCAGGTTGAGGGTATCA+CGG 0.569224 7_2:-43848714 Msa1058760:intron
ATGGAAGAGGTCACTTGTGG+TGG 0.571209 7_2:-43848993 Msa1058760:CDS
AGGGAAACTACTTCATTGAA+GGG 0.576462 7_2:-43848550 Msa1058760:CDS
TGGACTCATTATGAAAGATG+AGG 0.578843 7_2:-43848570 Msa1058760:CDS
ACCTGTAGTAGAAAGCGAGC+AGG 0.579269 7_2:+43851693 None:intergenic
GGAAGATGATTCTCTTAATG+TGG 0.582040 7_2:-43852325 Msa1058760:CDS
ATTTAGTCCAAAAGCATTTG+GGG 0.585174 7_2:-43849027 Msa1058760:CDS
GCTCGCTAGCGAGTTTAGCA+AGG 0.590899 7_2:-43851407 Msa1058760:CDS
CCACAAGTGACCTCTTCCAT+AGG 0.599800 7_2:+43848996 None:intergenic
CCATTGACTCCACAAGTGAA+AGG 0.606787 7_2:+43849952 None:intergenic
GGACTCATTATGAAAGATGA+GGG 0.607916 7_2:-43848569 Msa1058760:CDS
TATCACGGTCTGTGCGCAAG+TGG 0.613306 7_2:-43848699 Msa1058760:CDS
GGAGCCTGTAGATACCGCAT+TGG 0.615765 7_2:+43851342 None:intergenic
CAGTTTGCTCATCTTCAGAG+TGG 0.619152 7_2:+43848307 None:intergenic
GGAGGAGGTAACAGAAAACA+AGG 0.636948 7_2:+43845278 None:intergenic
TCGTGTACGCTATGCCAATG+CGG 0.638904 7_2:-43851356 Msa1058760:CDS
GAATAATGACTCAAGCACTA+CGG 0.643600 7_2:-43849218 Msa1058760:CDS
GGGACGCGGACCTATGGAAG+AGG 0.646600 7_2:-43849006 Msa1058760:CDS
TGGAGCTGTAGACGTGATTG+TGG 0.653253 7_2:-43849847 Msa1058760:CDS
CCAGTTGCAGATGAAAGCCA+TGG 0.653690 7_2:+43855678 None:intergenic
TGGAATTGGAGGATTACCAA+AGG 0.653796 7_2:-43851299 Msa1058760:intron
CCTATGGAAGAGGTCACTTG+TGG 0.658549 7_2:-43848996 Msa1058760:CDS
TTTAGTCCAAAAGCATTTGG+GGG 0.660428 7_2:-43849026 Msa1058760:CDS
GATTTAGAGAAATAATGACC+AGG 0.664279 7_2:-43851729 Msa1058760:CDS
GGGAAACTACTTCATTGAAG+GGG 0.678034 7_2:-43848549 Msa1058760:CDS
ACTTCCTGATGCTATCATTG+TGG 0.679189 7_2:-43852412 Msa1058760:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATTA+CGG + chr7_2:43845597-43845616 None:intergenic 0.0%
!!! TTAAAATTTTAAAATAATAA+TGG + chr7_2:43847373-43847392 None:intergenic 0.0%
!! GGATATTATAAAATATAATA+TGG + chr7_2:43845524-43845543 None:intergenic 10.0%
!!! GAATAAAATATATGATTTTA+GGG + chr7_2:43846156-43846175 None:intergenic 10.0%
!!! TGAATAAAATATATGATTTT+AGG + chr7_2:43846157-43846176 None:intergenic 10.0%
!!! CTATTTGTATTTAAAATTAA+GGG + chr7_2:43846255-43846274 None:intergenic 10.0%
!! AAAAAAATAATGTTAAAGAT+TGG - chr7_2:43847099-43847118 Msa1058760:intron 10.0%
!!! TCTTTATTTTAAATATATGT+AGG - chr7_2:43847265-43847284 Msa1058760:intron 10.0%
!! AGATAACATATTAAATTTAT+TGG + chr7_2:43847657-43847676 None:intergenic 10.0%
!! ATAAAGAAAATATAAATAGT+TGG + chr7_2:43851305-43851324 None:intergenic 10.0%
!! TTAAATTGGTATTTAAAAAA+TGG + chr7_2:43852850-43852869 None:intergenic 10.0%
!!! TTTTAATTTTCTGATAATTT+TGG - chr7_2:43853384-43853403 Msa1058760:intron 10.0%
!!! ATTAGATTGATTGTTTTTTA+GGG + chr7_2:43846087-43846106 None:intergenic 15.0%
!!! TATTAGATTGATTGTTTTTT+AGG + chr7_2:43846088-43846107 None:intergenic 15.0%
!! TTATAGTCAAATTTATTCAA+GGG - chr7_2:43846111-43846130 Msa1058760:intron 15.0%
!!! TTTAAAATTAAGGGTATTTT+TGG + chr7_2:43846246-43846265 None:intergenic 15.0%
!!! GCTATTTGTATTTAAAATTA+AGG + chr7_2:43846256-43846275 None:intergenic 15.0%
!!! GTAATTAATATGATCAATTT+TGG + chr7_2:43846470-43846489 None:intergenic 15.0%
!! CAAAAAATAATGTTAAAGAT+TGG - chr7_2:43846907-43846926 Msa1058760:intron 15.0%
!!! TGTTACTAATCTTTTTTTTA+GGG + chr7_2:43846942-43846961 None:intergenic 15.0%
!!! TTGTTACTAATCTTTTTTTT+AGG + chr7_2:43846943-43846962 None:intergenic 15.0%
!!! TTACTAATCTTTTTTTTTAG+AGG + chr7_2:43847005-43847024 None:intergenic 15.0%
!! CAAAAAATATTGTTAAAGAT+TGG - chr7_2:43847035-43847054 Msa1058760:intron 15.0%
!!! TGTTATTAATCTTTTTTTAG+AGG + chr7_2:43847134-43847153 None:intergenic 15.0%
!! TTATAAACAAAATATTGTCA+AGG + chr7_2:43847331-43847350 None:intergenic 15.0%
!!! TTTTAAAAAGACACTTAAAA+AGG + chr7_2:43847524-43847543 None:intergenic 15.0%
!!! CAAAATTTTGTTACAAATAA+TGG + chr7_2:43848073-43848092 None:intergenic 15.0%
!!! AATAAAATACTTTTAGTGAA+GGG + chr7_2:43848360-43848379 None:intergenic 15.0%
!!! AAATAAAATACTTTTAGTGA+AGG + chr7_2:43848361-43848380 None:intergenic 15.0%
!!! TATTTGCTATATTATATTGT+TGG - chr7_2:43848452-43848471 Msa1058760:CDS 15.0%
!! ATGGCTATTAAATTATTAAT+AGG - chr7_2:43850145-43850164 Msa1058760:intron 15.0%
!!! TATGTTTAATTTCTTTTAAG+TGG - chr7_2:43850466-43850485 Msa1058760:intron 15.0%
!! ATAGAATTTATAAAATTGAC+AGG + chr7_2:43850934-43850953 None:intergenic 15.0%
!!! AATATTTTAGAGTATCTTAA+AGG + chr7_2:43851541-43851560 None:intergenic 15.0%
!!! AATTTTTGGCTAAAAATAAA+AGG - chr7_2:43852462-43852481 Msa1058760:intron 15.0%
!!! TTTTATCAGATTTAGAAAAA+CGG + chr7_2:43852915-43852934 None:intergenic 15.0%
!! TATTTGAATGATTAATTAAG+AGG - chr7_2:43853605-43853624 Msa1058760:intron 15.0%
!! ATTTGAATGATTAATTAAGA+GGG - chr7_2:43853606-43853625 Msa1058760:intron 15.0%
!! TATTTGAATGATTAATTAAG+AGG - chr7_2:43853605-43853624 Msa1058760:intron 15.0%
!! ATTTGAATGATTAATTAAGA+GGG - chr7_2:43853606-43853625 Msa1058760:intron 15.0%
!! CACAACAATTTAAATTGAAT+TGG + chr7_2:43845824-43845843 None:intergenic 20.0%
!! ATTTCAAAAAGACACTTAAA+AGG - chr7_2:43845926-43845945 Msa1058760:intron 20.0%
!!! TTAGATTGATTGTTTTTTAG+GGG + chr7_2:43846086-43846105 None:intergenic 20.0%
!! CTTATAGTCAAATTTATTCA+AGG - chr7_2:43846110-43846129 Msa1058760:intron 20.0%
!!! TAAAATATATGATTTTAGGG+TGG + chr7_2:43846153-43846172 None:intergenic 20.0%
!! ATAATTACTATGATGAATTC+TGG + chr7_2:43846430-43846449 None:intergenic 20.0%
!! AGAATTCATCATAGTAATTA+TGG - chr7_2:43846429-43846448 Msa1058760:intron 20.0%
!!! TTGTTTAGTTTGAACTTTTT+CGG + chr7_2:43846695-43846714 None:intergenic 20.0%
!! CAAACTAAACAAAATTTGAA+AGG - chr7_2:43846703-43846722 Msa1058760:intron 20.0%
!!! AACATTATTTTTTGCTCAAT+CGG + chr7_2:43846901-43846920 None:intergenic 20.0%
!! ATGTTCAAAAGAAGAAAAAA+TGG + chr7_2:43847941-43847960 None:intergenic 20.0%
!! AAGAAATATAAAAGACATCA+TGG + chr7_2:43847964-43847983 None:intergenic 20.0%
!!! ATAAAGAAAGTACATGAATT+TGG - chr7_2:43848307-43848326 Msa1058760:three_prime_UTR 20.0%
!! NNNNNNNNAGAGATAGTATC+AGG - chr7_2:43848943-43848962 Msa1058760:CDS 20.0%
!! AAATAATCATTTCAGAGATA+GGG + chr7_2:43849164-43849183 None:intergenic 20.0%
!! AAAATAATCATTTCAGAGAT+AGG + chr7_2:43849165-43849184 None:intergenic 20.0%
!! TTGTTAATTTATCCTACATT+CGG + chr7_2:43849858-43849877 None:intergenic 20.0%
!! AGCTTCTTTAATAATTTGAA+GGG + chr7_2:43850033-43850052 None:intergenic 20.0%
!! TTGTACTTCAAATATGAAAA+TGG - chr7_2:43850126-43850145 Msa1058760:intron 20.0%
!! TAAGAAATACTTGATAAGTA+TGG - chr7_2:43850659-43850678 Msa1058760:intron 20.0%
!! ATAAATTCTATTCATTCTGT+TGG - chr7_2:43850943-43850962 Msa1058760:CDS 20.0%
!!! AAGGAATTTTACAAAAATGT+TGG + chr7_2:43851184-43851203 None:intergenic 20.0%
!! TGATCATTTCTTAAAATTGT+AGG - chr7_2:43851356-43851375 Msa1058760:CDS 20.0%
!! GATCATTTCTTAAAATTGTA+GGG - chr7_2:43851357-43851376 Msa1058760:CDS 20.0%
!! TTCTTGATTGTAAATAAGTA+AGG - chr7_2:43851477-43851496 Msa1058760:CDS 20.0%
!! TCTTGATTGTAAATAAGTAA+GGG - chr7_2:43851478-43851497 Msa1058760:CDS 20.0%
!! GTATTAACTGTTAAATATCT+TGG + chr7_2:43851596-43851615 None:intergenic 20.0%
!! AACAAAAATTAAGAGAGTTT+GGG + chr7_2:43851791-43851810 None:intergenic 20.0%
!! TAACAAAAATTAAGAGAGTT+TGG + chr7_2:43851792-43851811 None:intergenic 20.0%
!!! TCTCTTAATTTTTGTTAATC+AGG - chr7_2:43851795-43851814 Msa1058760:intron 20.0%
!! ATTGATAAAAACTGAAGATA+AGG - chr7_2:43852039-43852058 Msa1058760:intron 20.0%
!!! GAACTATAAATTATTTCTTG+AGG - chr7_2:43852098-43852117 Msa1058760:intron 20.0%
!! TAAAAGAATTGATACAAGAT+AGG + chr7_2:43852205-43852224 None:intergenic 20.0%
!!! GTTTTAAACTGAACTTAAAT+TGG + chr7_2:43852864-43852883 None:intergenic 20.0%
!!! AAATGTTAATTTTCGATTTC+TGG - chr7_2:43853289-43853308 Msa1058760:intron 20.0%
!!! AATGTTAATTTTCGATTTCT+GGG - chr7_2:43853290-43853309 Msa1058760:intron 20.0%
!! ATAAAATTTATGAATCTGAC+AGG - chr7_2:43853650-43853669 Msa1058760:intron 20.0%
!! ATAAAATTTATGAATCTGAC+AGG - chr7_2:43853650-43853669 Msa1058760:intron 20.0%
!! TAAACAAACTTACGAAAATA+TGG + chr7_2:43854287-43854306 None:intergenic 20.0%
!!! TATTTTCGTAAGTTTGTTTA+TGG - chr7_2:43854287-43854306 Msa1058760:intron 20.0%
!! AACATAACCTTTAAATGTAA+TGG + chr7_2:43854879-43854898 None:intergenic 20.0%
!! ATTACATTTAAAGGTTATGT+TGG - chr7_2:43854878-43854897 Msa1058760:intron 20.0%
!! TTACATTTAAAGGTTATGTT+GGG - chr7_2:43854879-43854898 Msa1058760:intron 20.0%
!! AACAATATGTTAATGAAATG+AGG - chr7_2:43854996-43855015 Msa1058760:intron 20.0%
!! AGTGACATTAGTAAAAATAT+TGG + chr7_2:43855117-43855136 None:intergenic 20.0%
!! TTACTAATGTCACTAAATAA+TGG - chr7_2:43855123-43855142 Msa1058760:intron 20.0%
!! TACTAATGTCACTAAATAAT+GGG - chr7_2:43855124-43855143 Msa1058760:intron 20.0%
!!! TTAACCAGTTTTTTTTAAAG+TGG - chr7_2:43855418-43855437 Msa1058760:intron 20.0%
!!! AAAACCACTTTAAAAAAAAC+TGG + chr7_2:43855425-43855444 None:intergenic 20.0%
! AAATATAATATGGTAGTCAG+AGG + chr7_2:43845514-43845533 None:intergenic 25.0%
! GAAAGGAAATAATAGCAAAT+TGG + chr7_2:43845554-43845573 None:intergenic 25.0%
! AATTGGAATTCAACTAAAAG+GGG + chr7_2:43845690-43845709 None:intergenic 25.0%
! CAATTGGAATTCAACTAAAA+GGG + chr7_2:43845691-43845710 None:intergenic 25.0%
! ACAATTGGAATTCAACTAAA+AGG + chr7_2:43845692-43845711 None:intergenic 25.0%
! AAGCAATAATGATTCACAAT+TGG + chr7_2:43845707-43845726 None:intergenic 25.0%
! CAATTTAAATTGAATTGGCA+CGG + chr7_2:43845819-43845838 None:intergenic 25.0%
!!! TGCACGTGTTATTTTATAAT+TGG + chr7_2:43846278-43846297 None:intergenic 25.0%
! TGTTAGAAGAATGAATGAAT+CGG - chr7_2:43846542-43846561 Msa1058760:intron 25.0%
! GTGATATCGAAAAAGAAAAT+AGG + chr7_2:43846744-43846763 None:intergenic 25.0%
!! TTCTTTGATCATTTTGAATG+TGG - chr7_2:43846825-43846844 Msa1058760:intron 25.0%
!!! GTTACTGGTATTTTTTTTAG+AGG + chr7_2:43847070-43847089 None:intergenic 25.0%
! TATATAACTAGTGGAAAGAT+GGG + chr7_2:43847490-43847509 None:intergenic 25.0%
! AAAAGACACTTAAAAAGGAA+CGG + chr7_2:43848277-43848296 None:intergenic 25.0%
! AAAAATACACATCGCTAATT+TGG + chr7_2:43847555-43847574 None:intergenic 25.0%
!! GATTAAAATGAGGGTATAAT+AGG + chr7_2:43847590-43847609 None:intergenic 25.0%
! AAAAAATAGGAATTTAGTGG+TGG + chr7_2:43847612-43847631 None:intergenic 25.0%
! GCAAAAAAATAGGAATTTAG+TGG + chr7_2:43847615-43847634 None:intergenic 25.0%
! GTAAATGTGTGCAAAAAAAT+AGG + chr7_2:43847625-43847644 None:intergenic 25.0%
! ATAAGAGAGTAATTGACAAA+GGG - chr7_2:43848186-43848205 Msa1058760:intron 25.0%
!!! GTGTCTTTTTGGTATTTTAA+GGG + chr7_2:43848230-43848249 None:intergenic 25.0%
!!! AGTGTCTTTTTGGTATTTTA+AGG + chr7_2:43848231-43848250 None:intergenic 25.0%
! TACCAAAAAGACACTTAAAT+AGG - chr7_2:43848236-43848255 Msa1058760:intron 25.0%
!! TTCCTATTTAAGTGTCTTTT+TGG + chr7_2:43848241-43848260 None:intergenic 25.0%
!!! CCTTTTTAAGTGTCTTTTTA+GGG + chr7_2:43847521-43847540 None:intergenic 25.0%
!!! TCCTTTTTAAGTGTCTTTTT+AGG + chr7_2:43847520-43847539 None:intergenic 25.0%
! AAAAGACACTTAAAAAGGAA+CGG - chr7_2:43848277-43848296 Msa1058760:three_prime_UTR 25.0%
!! TCACAATTTGAAATAACAAG+CGG - chr7_2:43848501-43848520 Msa1058760:CDS 25.0%
!!! GTTTCTAAAACACATATCAT+AGG + chr7_2:43848605-43848624 None:intergenic 25.0%
!!! AGTGATGACAATTCTTATTT+TGG - chr7_2:43848676-43848695 Msa1058760:CDS 25.0%
! TACAAAAGAAAATGAACTAC+TGG + chr7_2:43849104-43849123 None:intergenic 25.0%
!!! ATGACTATTTTTGAACAGAA+TGG - chr7_2:43849207-43849226 Msa1058760:CDS 25.0%
! TTCAAATGTGATGCATATTA+AGG + chr7_2:43849950-43849969 None:intergenic 25.0%
!! CATCACATTTGAATGTTTTA+GGG - chr7_2:43849957-43849976 Msa1058760:CDS 25.0%
! GAGCTTCTTTAATAATTTGA+AGG + chr7_2:43850034-43850053 None:intergenic 25.0%
!!! GGAGGTACATATTATTATTT+TGG - chr7_2:43850062-43850081 Msa1058760:intron 25.0%
! AAGCAATAATAATGAACTGT+CGG - chr7_2:43850214-43850233 Msa1058760:intron 25.0%
! ATTAAACATAACCATGCAAT+AGG + chr7_2:43850456-43850475 None:intergenic 25.0%
! AAGAACTTGGAATTTCTATA+TGG + chr7_2:43850525-43850544 None:intergenic 25.0%
! CAAAAATGACATTAAGAACT+TGG + chr7_2:43850538-43850557 None:intergenic 25.0%
! TAAGTATGGAAAATGAATAG+AGG - chr7_2:43850673-43850692 Msa1058760:intron 25.0%
! TTATAAGCATCTCCATTATT+TGG - chr7_2:43850699-43850718 Msa1058760:intron 25.0%
! ACTAATCTACTTCCAAATAA+TGG + chr7_2:43850714-43850733 None:intergenic 25.0%
!! ATTAGAGATAAGAAGGTTTT+TGG + chr7_2:43851041-43851060 None:intergenic 25.0%
!!! TGTTTGATTTTCAAGATTAG+AGG - chr7_2:43851230-43851249 Msa1058760:intron 25.0%
!! TTTCTTTATTTATGCTCTCT+TGG - chr7_2:43851316-43851335 Msa1058760:CDS 25.0%
!! TTCTTAAAATTGTAGGGTTT+TGG - chr7_2:43851363-43851382 Msa1058760:CDS 25.0%
! TGATCTGATGTGATTAAATA+TGG - chr7_2:43851430-43851449 Msa1058760:CDS 25.0%
! TCTATTATTAGAACAAGTAG+AGG + chr7_2:43851457-43851476 None:intergenic 25.0%
! AGGGAATTAATCATGAAATA+TGG - chr7_2:43851497-43851516 Msa1058760:CDS 25.0%
!! TAAGATGATTTTGTAATTCC+AGG - chr7_2:43851648-43851667 Msa1058760:intron 25.0%
! CTACTGAATGTTAAATCTAA+CGG + chr7_2:43851890-43851909 None:intergenic 25.0%
!!! AATTTATAGTTCTGAATCAG+AGG + chr7_2:43852090-43852109 None:intergenic 25.0%
! ACTAAGATACAAAAGAAAAG+TGG + chr7_2:43852142-43852161 None:intergenic 25.0%
! ACATTAGTATTGCTTTCAAT+AGG - chr7_2:43852622-43852641 Msa1058760:intron 25.0%
! CAGTTCAAATCTTTATTAAG+TGG + chr7_2:43852825-43852844 None:intergenic 25.0%
!! ATTTGGTGAATTTGTGATTT+GGG + chr7_2:43853063-43853082 None:intergenic 25.0%
! TTAGGTTAAGTGAATTGATT+TGG + chr7_2:43853080-43853099 None:intergenic 25.0%
!!! AAAATGGATTATACGAATTG+GGG + chr7_2:43853125-43853144 None:intergenic 25.0%
!!! GAAAATGGATTATACGAATT+GGG + chr7_2:43853126-43853145 None:intergenic 25.0%
!! TGTTGTTTAGGTTTATTTCT+AGG - chr7_2:43853709-43853728 Msa1058760:intron 25.0%
! CCAATTGTTATCAATGAAAT+GGG + chr7_2:43854489-43854508 None:intergenic 25.0%
! TCCAATTGTTATCAATGAAA+TGG + chr7_2:43854490-43854509 None:intergenic 25.0%
! AACAGATTATACTTAAGTGT+AGG + chr7_2:43855037-43855056 None:intergenic 25.0%
! AAACCAGTTCAAAAAAAATC+TGG - chr7_2:43855182-43855201 Msa1058760:intron 25.0%
!! AAAAAAATCTGGTTCAAAAC+CGG - chr7_2:43855193-43855212 Msa1058760:intron 25.0%
!!! ACTGGATTTTAGTTTTAAAC+CGG + chr7_2:43855234-43855253 None:intergenic 25.0%
! AAAACCAGTTCAAAAAAATC+TGG - chr7_2:43855257-43855276 Msa1058760:intron 25.0%
!! AAAAAAATCTGGTTCAAAAC+CGG - chr7_2:43855193-43855212 Msa1058760:intron 25.0%
! ATAAATAAGCAGGTTTCAAA+TGG + chr7_2:43855571-43855590 None:intergenic 25.0%
! TTGAAACCTGCTTATTTATT+AGG - chr7_2:43855572-43855591 Msa1058760:intron 25.0%
! GTATTTCCTAATAAATAAGC+AGG + chr7_2:43855581-43855600 None:intergenic 25.0%
GAGTCTTCAGTTGTAAAATT+AGG - chr7_2:43845460-43845479 Msa1058760:intron 30.0%
TAATAGCAAATTGGTGTGAA+AGG + chr7_2:43845545-43845564 None:intergenic 30.0%
AGCAATTAAAATGGAGTGAA+AGG + chr7_2:43845571-43845590 None:intergenic 30.0%
TTACGGGAAAGCAATTAAAA+TGG + chr7_2:43845580-43845599 None:intergenic 30.0%
TGGAAACTACATATCTAACA+CGG + chr7_2:43845737-43845756 None:intergenic 30.0%
!! TAATTTTAATGACTGGCAAG+TGG + chr7_2:43845788-43845807 None:intergenic 30.0%
!! ACAGTGGTAATTTTAATGAC+TGG + chr7_2:43845795-43845814 None:intergenic 30.0%
TTAAAGTTTCCATCGTTAAC+AGG - chr7_2:43845877-43845896 Msa1058760:intron 30.0%
!! CAGGTTTGTTGTTACTAATT+TGG - chr7_2:43845896-43845915 Msa1058760:intron 30.0%
TCAAAAAGACACTTAAAAGG+AGG - chr7_2:43845929-43845948 Msa1058760:intron 30.0%
! ATATATTGTTGTTGCCTTGT+TGG + chr7_2:43846023-43846042 None:intergenic 30.0%
TGAATTTGATCTGTGGTTAA+CGG + chr7_2:43846347-43846366 None:intergenic 30.0%
!!! TTTTTCCTGCTTTATTTGCA+GGG - chr7_2:43846502-43846521 Msa1058760:intron 30.0%
!!! TTTTTTCTCACGTTTGTTAC+TGG + chr7_2:43847085-43847104 None:intergenic 30.0%
GTATATAACTAGTGGAAAGA+TGG + chr7_2:43847491-43847510 None:intergenic 30.0%
!! TTAGTGGTGGATTAAAATGA+GGG + chr7_2:43847599-43847618 None:intergenic 30.0%
!! TTTAGTGGTGGATTAAAATG+AGG + chr7_2:43847600-43847619 None:intergenic 30.0%
AGAAAAAATGGAAGACTCAT+TGG + chr7_2:43847929-43847948 None:intergenic 30.0%
GATAAGAGAGTAATTGACAA+AGG - chr7_2:43848185-43848204 Msa1058760:intron 30.0%
CCCTAAAAAGACACTTAAAA+AGG - chr7_2:43848272-43848291 Msa1058760:three_prime_UTR 30.0%
!!! GTGTTTTAGAAACATTATCG+TGG - chr7_2:43848612-43848631 Msa1058760:CDS 30.0%
TGATTCTCTTAATGTGGTTA+AGG - chr7_2:43848639-43848658 Msa1058760:CDS 30.0%
!!! TGACAATTCTTATTTTGGCT+TGG - chr7_2:43848681-43848700 Msa1058760:CDS 30.0%
TTGTGGTGATTATATGCATT+TGG - chr7_2:43849054-43849073 Msa1058760:intron 30.0%
GATTTAGAGAAATAATGACC+AGG - chr7_2:43849229-43849248 Msa1058760:CDS 30.0%
AAGAATAAGAATGATTCCCT+CGG + chr7_2:43849358-43849377 None:intergenic 30.0%
GAAAAATAACGCACTTTGTT+TGG - chr7_2:43849518-43849537 Msa1058760:intron 30.0%
TTATCCTTTAGATCGTTGTT+TGG - chr7_2:43849709-43849728 Msa1058760:intron 30.0%
TATACCAAACAACGATCTAA+AGG + chr7_2:43849716-43849735 None:intergenic 30.0%
TAGATCGTTGTTTGGTATAT+CGG - chr7_2:43849717-43849736 Msa1058760:intron 30.0%
!!! TGTTGCACTTTTTTTTCCTA+AGG - chr7_2:43849789-43849808 Msa1058760:intron 30.0%
!!! ACTTTTTTTTCCTAAGGTGT+TGG - chr7_2:43849795-43849814 Msa1058760:intron 30.0%
GTGGATATGTATTAAAGTGA+AGG + chr7_2:43849921-43849940 None:intergenic 30.0%
TCACTTTAATACATATCCAC+AGG - chr7_2:43849921-43849940 Msa1058760:CDS 30.0%
! GCATCACATTTGAATGTTTT+AGG - chr7_2:43849956-43849975 Msa1058760:CDS 30.0%
!!! ACATTTGAATGTTTTAGGGT+AGG - chr7_2:43849961-43849980 Msa1058760:CDS 30.0%
GGTAGGATTGTTGAAATTTA+TGG - chr7_2:43849978-43849997 Msa1058760:CDS 30.0%
ATTAAAGAAGCTCAAAAGCT+TGG - chr7_2:43850041-43850060 Msa1058760:intron 30.0%
GACAGTTCATTATTATTGCT+TGG + chr7_2:43850215-43850234 None:intergenic 30.0%
ACACACAATAACTTAATGCT+TGG - chr7_2:43850394-43850413 Msa1058760:intron 30.0%
TAATGAGAATTCCTATTGCA+TGG - chr7_2:43850442-43850461 Msa1058760:intron 30.0%
!! CTTTTAAGTGGAAAATGTAC+AGG - chr7_2:43850478-43850497 Msa1058760:intron 30.0%
AATCAGGATTAGAGATAAGA+AGG + chr7_2:43851048-43851067 None:intergenic 30.0%
! AACAAATTTTCAGCACAATC+AGG + chr7_2:43851064-43851083 None:intergenic 30.0%
GTTGATACACTAACAAAAAG+TGG - chr7_2:43851091-43851110 Msa1058760:intron 30.0%
! TGAAAATCAAACACTGCTTT+TGG + chr7_2:43851223-43851242 None:intergenic 30.0%
!! TAAAATTGTAGGGTTTTGGT+AGG - chr7_2:43851367-43851386 Msa1058760:CDS 30.0%
!! AAAATTGTAGGGTTTTGGTA+GGG - chr7_2:43851368-43851387 Msa1058760:CDS 30.0%
ACGATACAATGATGATATGA+TGG - chr7_2:43851563-43851582 Msa1058760:intron 30.0%
AATTGATCAAGTTCGCATTT+CGG + chr7_2:43851688-43851707 None:intergenic 30.0%
AAATGCGAACTTGATCAATT+AGG - chr7_2:43851688-43851707 Msa1058760:intron 30.0%
TGTTAAATCTAACGGTTTCT+TGG + chr7_2:43851882-43851901 None:intergenic 30.0%
!! AGATTTAGTCCAAAAGCATT+TGG - chr7_2:43851929-43851948 Msa1058760:intron 30.0%
!! GATTTAGTCCAAAAGCATTT+GGG - chr7_2:43851930-43851949 Msa1058760:intron 30.0%
!! ATTTAGTCCAAAAGCATTTG+GGG - chr7_2:43851931-43851950 Msa1058760:intron 30.0%
TAAAAACTGAAGATAAGGTG+TGG - chr7_2:43852044-43852063 Msa1058760:intron 30.0%
GAGAAAGAAAAGGAGAAATT+GGG + chr7_2:43852177-43852196 None:intergenic 30.0%
TGAGAAAGAAAAGGAGAAAT+TGG + chr7_2:43852178-43852197 None:intergenic 30.0%
ATAGGTGTTTGAGAAAGAAA+AGG + chr7_2:43852187-43852206 None:intergenic 30.0%
GATTTGTGACAAGTTAGTTA+TGG - chr7_2:43852484-43852503 Msa1058760:intron 30.0%
! TTAAACCTCCAAATTTTCCA+TGG - chr7_2:43852538-43852557 Msa1058760:intron 30.0%
ATCACATAATGTCTCCAATT+TGG + chr7_2:43852574-43852593 None:intergenic 30.0%
!!! CAAACTGCATTTTAAGTTAC+TGG - chr7_2:43852667-43852686 Msa1058760:intron 30.0%
! TTTAAGTTACTGGAATTGTC+AGG - chr7_2:43852677-43852696 Msa1058760:intron 30.0%
ATACAGTTCAGTTAGTAGTT+TGG + chr7_2:43852781-43852800 None:intergenic 30.0%
TAAGTGGTTCAGTTCAAATA+TGG + chr7_2:43852809-43852828 None:intergenic 30.0%
!!! GTTTAAAACCAGTTTTGAAC+CGG - chr7_2:43852875-43852894 Msa1058760:intron 30.0%
AACGGTTCATAAACTTAAAC+CGG + chr7_2:43852897-43852916 None:intergenic 30.0%
!! GATTTGGTGAATTTGTGATT+TGG + chr7_2:43853064-43853083 None:intergenic 30.0%
!! CGAAAATGGATTATACGAAT+TGG + chr7_2:43853127-43853146 None:intergenic 30.0%
AATCGAAAAGCTATAAGCAT+AGG + chr7_2:43853255-43853274 None:intergenic 30.0%
! CTTATAGCTTTTCGATTTCT+GGG - chr7_2:43853258-43853277 Msa1058760:intron 30.0%
TCACAAACTGAATACAACAA+AGG + chr7_2:43853355-43853374 None:intergenic 30.0%
AACAACAACAGAATTAGAGA+GGG + chr7_2:43853696-43853715 None:intergenic 30.0%
AAACAACAACAGAATTAGAG+AGG + chr7_2:43853697-43853716 None:intergenic 30.0%
!! CTCTAATTCTGTTGTTGTTT+AGG - chr7_2:43853697-43853716 Msa1058760:intron 30.0%
AAATTGCAACAGCATCAATA+TGG - chr7_2:43853836-43853855 Msa1058760:intron 30.0%
! TTTGCATTGTTTGAAACTAG+AGG + chr7_2:43853921-43853940 None:intergenic 30.0%
AGTTTCAAACAATGCAAACA+TGG - chr7_2:43853923-43853942 Msa1058760:intron 30.0%
GTTTCAAACAATGCAAACAT+GGG - chr7_2:43853924-43853943 Msa1058760:intron 30.0%
GATTCATGCATCATCATATT+GGG + chr7_2:43854125-43854144 None:intergenic 30.0%
TGATTCATGCATCATCATAT+TGG + chr7_2:43854126-43854145 None:intergenic 30.0%
ACATGTTCACCAAATCAATT+CGG + chr7_2:43854226-43854245 None:intergenic 30.0%
!! ACGTGAGATTTTGAAGAATT+GGG - chr7_2:43854352-43854371 Msa1058760:intron 30.0%
! CCCATTTCATTGATAACAAT+TGG - chr7_2:43854486-43854505 Msa1058760:intron 30.0%
AGAATACACAGGAGAAATTA+TGG - chr7_2:43854547-43854566 Msa1058760:intron 30.0%
AGGAGAAATTATGGCAAAAA+CGG - chr7_2:43854556-43854575 Msa1058760:intron 30.0%
AATTATGGCAAAAACGGTTA+AGG - chr7_2:43854562-43854581 Msa1058760:intron 30.0%
! CAAAATGGTCTAGTTTCAAA+TGG - chr7_2:43854689-43854708 Msa1058760:intron 30.0%
! CACAATAAGGTTTAGAATGT+GGG + chr7_2:43854741-43854760 None:intergenic 30.0%
! TCACAATAAGGTTTAGAATG+TGG + chr7_2:43854742-43854761 None:intergenic 30.0%
CATTCTAAACCTTATTGTGA+AGG - chr7_2:43854742-43854761 Msa1058760:intron 30.0%
!! TTGAATCTCTGAAATCTTGA+AGG + chr7_2:43854836-43854855 None:intergenic 30.0%
CGTGAAACCATTACATTTAA+AGG - chr7_2:43854869-43854888 Msa1058760:intron 30.0%
TGTGAATTCAAGCTCTATAA+AGG + chr7_2:43854972-43854991 None:intergenic 30.0%
AATGAAATGAGGAAAGACAA+AGG - chr7_2:43855007-43855026 Msa1058760:intron 30.0%
!!! TTTTGAACTGGTTTTCAAAC+TGG + chr7_2:43855176-43855195 None:intergenic 30.0%
!!! GAACCAGATTTTTTTTGAAC+TGG + chr7_2:43855188-43855207 None:intergenic 30.0%
!!! CCGGTTTACTTATTTTTAAC+CGG + chr7_2:43855215-43855234 None:intergenic 30.0%
CCGGTTAAAAATAAGTAAAC+CGG - chr7_2:43855212-43855231 Msa1058760:intron 30.0%
!!! TTTTGAACTGGTTTTCAAAC+TGG + chr7_2:43855176-43855195 None:intergenic 30.0%
!!! TGAACCAGATTTTTTTGAAC+TGG + chr7_2:43855264-43855283 None:intergenic 30.0%
!! CCGGTTTACATATTTTTAAC+CGG + chr7_2:43855290-43855309 None:intergenic 30.0%
CCGGTTAAAAATATGTAAAC+CGG - chr7_2:43855287-43855306 Msa1058760:intron 30.0%
! ACCGGTTTAAAACTATAAAC+CGG - chr7_2:43855305-43855324 Msa1058760:intron 30.0%
!!! ACCGGTTTATAGTTTTAAAC+CGG + chr7_2:43855309-43855328 None:intergenic 30.0%
!!! CCGGTTTATTTATTTTGAAC+CGG + chr7_2:43855338-43855357 None:intergenic 30.0%
CCGGTTCAAAATAAATAAAC+CGG - chr7_2:43855335-43855354 Msa1058760:intron 30.0%
! TTTTCAAACCAGTTACAGTT+CGG + chr7_2:43855397-43855416 None:intergenic 30.0%
CTGAATTGTATCCATTAATG+TGG - chr7_2:43855450-43855469 Msa1058760:intron 30.0%
TTTACATCGCATGTTTCAAA+TGG + chr7_2:43855650-43855669 None:intergenic 30.0%
TGGATGACTTGAAATTATCC+TGG + chr7_2:43845396-43845415 None:intergenic 35.0%
TGTGAATCATTATTGCTTGC+TGG - chr7_2:43845709-43845728 Msa1058760:intron 35.0%
AACAACAAACCTGTTAACGA+TGG + chr7_2:43845889-43845908 None:intergenic 35.0%
! CTTTTCAAAGTACACCAACA+AGG - chr7_2:43846006-43846025 Msa1058760:intron 35.0%
CTCTTTGTGAATTTGATCTG+TGG + chr7_2:43846354-43846373 None:intergenic 35.0%
!!! GTTTTTCCTGCTTTATTTGC+AGG - chr7_2:43846501-43846520 Msa1058760:intron 35.0%
TATAACCCTGCAAATAAAGC+AGG + chr7_2:43846510-43846529 None:intergenic 35.0%
AGACTTGTGAGAAATAAAGC+AGG + chr7_2:43846636-43846655 None:intergenic 35.0%
GACCTGAATTCTTCTATCTT+CGG + chr7_2:43846798-43846817 None:intergenic 35.0%
! TGATCATTTTGAATGTGGAC+TGG - chr7_2:43846830-43846849 Msa1058760:intron 35.0%
! GAGAGCGCACAAAAAAAAAT+AGG + chr7_2:43847730-43847749 None:intergenic 35.0%
TCATTGGAACTGTTTATGAG+AGG + chr7_2:43847913-43847932 None:intergenic 35.0%
! TTGTGGAAGCTTTTGGATTT+CGG - chr7_2:43848563-43848582 Msa1058760:CDS 35.0%
GGAAGATGATTCTCTTAATG+TGG - chr7_2:43848633-43848652 Msa1058760:CDS 35.0%
AACAAAATCACTCGAGTCTA+AGG + chr7_2:43848809-43848828 None:intergenic 35.0%
! TAGACTCGAGTGATTTTGTT+TGG - chr7_2:43848809-43848828 Msa1058760:intron 35.0%
!! GAGTGATTTTGTTTGGATTG+AGG - chr7_2:43848816-43848835 Msa1058760:intron 35.0%
AGGTAATCTAACAGCAAATG+AGG - chr7_2:43848963-43848982 Msa1058760:CDS 35.0%
! AACCACTTGTAACACTGATT+AGG - chr7_2:43849003-43849022 Msa1058760:CDS 35.0%
! ACCACTTGTAACACTGATTA+GGG - chr7_2:43849004-43849023 Msa1058760:CDS 35.0%
! CACCTAAGTTTTGCAATTTG+TGG - chr7_2:43849037-43849056 Msa1058760:intron 35.0%
CACCACAAATTGCAAAACTT+AGG + chr7_2:43849042-43849061 None:intergenic 35.0%
AGAGAAATAATGACCAGGAT+TGG - chr7_2:43849234-43849253 Msa1058760:CDS 35.0%
TCCTTGTAGTCTGGAAAATT+AGG - chr7_2:43849409-43849428 Msa1058760:intron 35.0%
! ACCTAATTTTCCAGACTACA+AGG + chr7_2:43849413-43849432 None:intergenic 35.0%
AAGAGCTATATCAAGCTTCA+AGG + chr7_2:43849640-43849659 None:intergenic 35.0%
TTGAAGCTTGATATAGCTCT+TGG - chr7_2:43849639-43849658 Msa1058760:intron 35.0%
CTTGATATAGCTCTTGGAAT+TGG - chr7_2:43849645-43849664 Msa1058760:intron 35.0%
! ACTAGTCTAGTTATCACCTT+TGG + chr7_2:43849678-43849697 None:intergenic 35.0%
AGATCGTTGTTTGGTATATC+GGG - chr7_2:43849718-43849737 Msa1058760:intron 35.0%
! AAAAGTGCAACATTGTCACT+AGG + chr7_2:43849781-43849800 None:intergenic 35.0%
TACATTCGGAGTATAAAGTG+TGG + chr7_2:43849844-43849863 None:intergenic 35.0%
ACACTTTATACTCCGAATGT+AGG - chr7_2:43849843-43849862 Msa1058760:CDS 35.0%
ATGCATATTAAGGAAACCTG+TGG + chr7_2:43849940-43849959 None:intergenic 35.0%
ACATGAAGTGATCTGAGTTA+AGG - chr7_2:43850177-43850196 Msa1058760:intron 35.0%
TGTGTGTGCATGTGTAAAAT+GGG + chr7_2:43850379-43850398 None:intergenic 35.0%
AGTGGAAAATGTACAGGTTA+AGG - chr7_2:43850484-43850503 Msa1058760:intron 35.0%
GTGGAAAATGTACAGGTTAA+GGG - chr7_2:43850485-43850504 Msa1058760:intron 35.0%
TTTACTACGAATCTTGCATG+CGG + chr7_2:43850901-43850920 None:intergenic 35.0%
ATTCTATTCATTCTGTTGGC+AGG - chr7_2:43850947-43850966 Msa1058760:CDS 35.0%
!! TGCTGAAAATTTGTTGAGCA+TGG - chr7_2:43851069-43851088 Msa1058760:intron 35.0%
TGGATCTCATTACAATGCAA+AGG + chr7_2:43851203-43851222 None:intergenic 35.0%
ATTGATCAAGTTCGCATTTC+GGG + chr7_2:43851687-43851706 None:intergenic 35.0%
GAATAATGACTCAAGCACTA+CGG - chr7_2:43851740-43851759 Msa1058760:intron 35.0%
AAATTAAGAGAGTTTGGGAG+CGG + chr7_2:43851786-43851805 None:intergenic 35.0%
CAGTAGTTTCTCTCATATAC+AGG - chr7_2:43851904-43851923 Msa1058760:intron 35.0%
!! TTTAGTCCAAAAGCATTTGG+GGG - chr7_2:43851932-43851951 Msa1058760:intron 35.0%
AGCAATGAAAAAAGCTGAAC+TGG - chr7_2:43852304-43852323 Msa1058760:CDS 35.0%
GCAATGAAAAAAGCTGAACT+GGG - chr7_2:43852305-43852324 Msa1058760:CDS 35.0%
AATCAAAGACCTCTGATTCT+TGG + chr7_2:43852355-43852374 None:intergenic 35.0%
AGAATCAGAGGTCTTTGATT+TGG - chr7_2:43852355-43852374 Msa1058760:CDS 35.0%
!! TTTGATTTGGCTTGTGAACA+TGG - chr7_2:43852368-43852387 Msa1058760:CDS 35.0%
TGGACTCATTATGAAAGATG+AGG - chr7_2:43852388-43852407 Msa1058760:CDS 35.0%
GGACTCATTATGAAAGATGA+GGG - chr7_2:43852389-43852408 Msa1058760:CDS 35.0%
AGGGAAACTACTTCATTGAA+GGG - chr7_2:43852408-43852427 Msa1058760:CDS 35.0%
! AGAAGCTGCTGAACAATTTT+TGG - chr7_2:43852448-43852467 Msa1058760:intron 35.0%
TAGACCATCCATGGAAAATT+TGG + chr7_2:43852549-43852568 None:intergenic 35.0%
!! GTGAAAAACACTTTAGAGCT+AGG - chr7_2:43852717-43852736 Msa1058760:intron 35.0%
! AGTAGTTTGGTTCAGTTAAC+TGG + chr7_2:43852768-43852787 None:intergenic 35.0%
! AACTTAAACCGGTTCAAAAC+TGG + chr7_2:43852886-43852905 None:intergenic 35.0%
TGAAGCCCAAATTCAGAAAA+TGG - chr7_2:43852990-43853009 Msa1058760:intron 35.0%
! GGGTTCCATTTTCTGAATTT+GGG + chr7_2:43852998-43853017 None:intergenic 35.0%
! AGGGTTCCATTTTCTGAATT+TGG + chr7_2:43852999-43853018 None:intergenic 35.0%
! TTGTGATTTGGGATCGATTT+GGG + chr7_2:43853052-43853071 None:intergenic 35.0%
! TTTGTGATTTGGGATCGATT+TGG + chr7_2:43853053-43853072 None:intergenic 35.0%
CACTTAACCTAACCCAAATT+CGG - chr7_2:43853088-43853107 Msa1058760:intron 35.0%
! GCTTATAGCTTTTCGATTTC+TGG - chr7_2:43853257-43853276 Msa1058760:intron 35.0%
TATGATGAAGAAAACTGTGC+TGG - chr7_2:43853444-43853463 Msa1058760:intron 35.0%
GATGGTCATGATAGCATTAT+GGG - chr7_2:43853858-43853877 Msa1058760:intron 35.0%
! TTGTTTGAAACTAGAGGTTG+AGG + chr7_2:43853915-43853934 None:intergenic 35.0%
AAGACAAGAATCCAGTATAG+TGG - chr7_2:43854050-43854069 Msa1058760:intron 35.0%
TGAATCAGATTCAAGCTCAT+TGG - chr7_2:43854139-43854158 Msa1058760:intron 35.0%
GAATCAGATTCAAGCTCATT+GGG - chr7_2:43854140-43854159 Msa1058760:intron 35.0%
ATTCAAGCTCATTGGGAAAT+AGG - chr7_2:43854147-43854166 Msa1058760:intron 35.0%
TTCAAGCTCATTGGGAAATA+GGG - chr7_2:43854148-43854167 Msa1058760:intron 35.0%
CTGACTTCTTGATCAAACTT+CGG + chr7_2:43854203-43854222 None:intergenic 35.0%
!!! CTTTTGAAATGGAAGTTCCA+AGG + chr7_2:43854255-43854274 None:intergenic 35.0%
CTTGGAACTTCCATTTCAAA+AGG - chr7_2:43854253-43854272 Msa1058760:intron 35.0%
! CGAGATGGTAACATGAATTT+TGG + chr7_2:43854320-43854339 None:intergenic 35.0%
!! CACGTGAGATTTTGAAGAAT+TGG - chr7_2:43854351-43854370 Msa1058760:intron 35.0%
CAATTGGAAATTGCAGAAGA+AGG - chr7_2:43854502-43854521 Msa1058760:intron 35.0%
GAATTCGACATCTCAAAAGA+TGG - chr7_2:43854657-43854676 Msa1058760:intron 35.0%
AGATGGCTTCTATCTCAAAA+TGG - chr7_2:43854674-43854693 Msa1058760:intron 35.0%
CTAAACCTTATTGTGAAGGA+CGG - chr7_2:43854746-43854765 Msa1058760:intron 35.0%
TAAACCTTATTGTGAAGGAC+GGG - chr7_2:43854747-43854766 Msa1058760:intron 35.0%
TTGGAACTGAACCACATTAA+TGG + chr7_2:43855464-43855483 None:intergenic 35.0%
!! TTCATGGTTCTAAACTGCAT+TGG + chr7_2:43855483-43855502 None:intergenic 35.0%
TTTCAACAGGTTCTTCCTTC+AGG - chr7_2:43845305-43845324 Msa1058760:three_prime_UTR 40.0%
GTTCTTCCTTCAGGTACTTA+GGG - chr7_2:43845314-43845333 Msa1058760:three_prime_UTR 40.0%
TTTAGACCCTAAGTACCTGA+AGG + chr7_2:43845323-43845342 None:intergenic 40.0%
ATCCTGGAAAAGTTGTTCCT+CGG + chr7_2:43845380-43845399 None:intergenic 40.0%
GTCATCCATATTCGATCCAA+CGG - chr7_2:43845408-43845427 Msa1058760:three_prime_UTR 40.0%
AAGACTCCTAAAAATCGTGC+GGG + chr7_2:43845447-43845466 None:intergenic 40.0%
GAAGACTCCTAAAAATCGTG+CGG + chr7_2:43845448-43845467 None:intergenic 40.0%
! TTGTTGTGAATTGCTTGCTG+CGG - chr7_2:43845836-43845855 Msa1058760:intron 40.0%
! ACCCAAAAGTGTGCTGAAAA+GGG + chr7_2:43846210-43846229 None:intergenic 40.0%
! AACCCAAAAGTGTGCTGAAA+AGG + chr7_2:43846211-43846230 None:intergenic 40.0%
AACGAGGATGATTAGTGACA+TGG + chr7_2:43846309-43846328 None:intergenic 40.0%
ATTTGATCTGTGGTTAACGG+TGG + chr7_2:43846344-43846363 None:intergenic 40.0%
TCGGAGTCTGAGAAAATCAA+AGG - chr7_2:43846561-43846580 Msa1058760:intron 40.0%
CACCGAAGATAGAAGAATTC+AGG - chr7_2:43846793-43846812 Msa1058760:intron 40.0%
AATAACACAGACGAGATAGC+CGG - chr7_2:43846854-43846873 Msa1058760:intron 40.0%
TCTGTTTCAGCAACAACTTC+CGG + chr7_2:43846876-43846895 None:intergenic 40.0%
GACACTTAAAAAGGAACGGA+GGG + chr7_2:43848281-43848300 None:intergenic 40.0%
AGACACTTAAAAAGGAACGG+AGG + chr7_2:43848280-43848299 None:intergenic 40.0%
CTGTTTATGAGAGGTGAAGA+TGG + chr7_2:43847904-43847923 None:intergenic 40.0%
AGACACTTAAAAAGGAACGG+AGG - chr7_2:43848280-43848299 Msa1058760:three_prime_UTR 40.0%
GACACTTAAAAAGGAACGGA+GGG - chr7_2:43848281-43848300 Msa1058760:three_prime_UTR 40.0%
ACTTCCTGATGCTATCATTG+TGG - chr7_2:43848546-43848565 Msa1058760:CDS 40.0%
! GCTATCATTGTGGAAGCTTT+TGG - chr7_2:43848556-43848575 Msa1058760:CDS 40.0%
! CCACTTGTAACACTGATTAG+GGG - chr7_2:43849005-43849024 Msa1058760:CDS 40.0%
! ACACTGATTAGGGGAATTGA+TGG - chr7_2:43849014-43849033 Msa1058760:CDS 40.0%
GTGGGTACATAAGGAGATAT+GGG + chr7_2:43849298-43849317 None:intergenic 40.0%
TATTTCGCATGAACTCTCAG+TGG - chr7_2:43849325-43849344 Msa1058760:intron 40.0%
GATATAGCTCTTGGAATTGG+AGG - chr7_2:43849648-43849667 Msa1058760:intron 40.0%
TGGAATTGGAGGATTACCAA+AGG - chr7_2:43849659-43849678 Msa1058760:intron 40.0%
AAAGAAGCTCAAAAGCTTGG+AGG - chr7_2:43850044-43850063 Msa1058760:intron 40.0%
GTGTGTGTGCATGTGTAAAA+TGG + chr7_2:43850380-43850399 None:intergenic 40.0%
GTCGGCATCATTTCAATTCA+TGG - chr7_2:43850591-43850610 Msa1058760:intron 40.0%
TTCATGGTTACTCAGAAGTG+AGG - chr7_2:43850607-43850626 Msa1058760:intron 40.0%
TGAGGCATAGAGAAAGAACT+GGG - chr7_2:43850625-43850644 Msa1058760:intron 40.0%
AGAAGAAGCTTAATGCAGTC+TGG + chr7_2:43850802-43850821 None:intergenic 40.0%
TGCATTAGACCTTTCACTTG+TGG - chr7_2:43850997-43851016 Msa1058760:intron 40.0%
CTTTCACTTGTGGAGTCAAT+GGG - chr7_2:43851007-43851026 Msa1058760:intron 40.0%
GTTGACAGTGTAAGTTACTG+TGG - chr7_2:43851133-43851152 Msa1058760:intron 40.0%
TGTCTGTTACAGCTACAACA+GGG + chr7_2:43851277-43851296 None:intergenic 40.0%
AATTAAGAGAGTTTGGGAGC+GGG + chr7_2:43851785-43851804 None:intergenic 40.0%
TCGTTTGCGACTTTCAAGAA+TGG - chr7_2:43852015-43852034 Msa1058760:intron 40.0%
CGTTTGCGACTTTCAAGAAT+GGG - chr7_2:43852016-43852035 Msa1058760:intron 40.0%
! TTTTATCCTCTCCTGACATC+TGG - chr7_2:43852220-43852239 Msa1058760:intron 40.0%
!!! TCAGCTTTTTTCATTGCTGC+TGG + chr7_2:43852302-43852321 None:intergenic 40.0%
GAGGGAAACTACTTCATTGA+AGG - chr7_2:43852407-43852426 Msa1058760:CDS 40.0%
GGGAAACTACTTCATTGAAG+GGG - chr7_2:43852409-43852428 Msa1058760:CDS 40.0%
GCAGCTTCTCTACTAGTAAA+AGG + chr7_2:43852437-43852456 None:intergenic 40.0%
! ACCTCCAAATTTTCCATGGA+TGG - chr7_2:43852542-43852561 Msa1058760:intron 40.0%
ACCATCCATGGAAAATTTGG+AGG + chr7_2:43852546-43852565 None:intergenic 40.0%
! AATTTGGCTTAGACCATCCA+TGG + chr7_2:43852558-43852577 None:intergenic 40.0%
ATGGATGGTCTAAGCCAAAT+TGG - chr7_2:43852557-43852576 Msa1058760:intron 40.0%
!! AAACACTTTAGAGCTAGGTG+TGG - chr7_2:43852722-43852741 Msa1058760:intron 40.0%
!! GGTTCTTCATCATCGATTTG+GGG + chr7_2:43853024-43853043 None:intergenic 40.0%
!! GGGTTCTTCATCATCGATTT+GGG + chr7_2:43853025-43853044 None:intergenic 40.0%
! AGGGTTCTTCATCATCGATT+TGG + chr7_2:43853026-43853045 None:intergenic 40.0%
!! TGTGATTTGGGATCGATTTG+GGG + chr7_2:43853051-43853070 None:intergenic 40.0%
GATTATACGAATTGGGGCTA+GGG + chr7_2:43853119-43853138 None:intergenic 40.0%
CAAATCCGCTAAGATAACAC+TGG - chr7_2:43853316-43853335 Msa1058760:intron 40.0%
CAACACCAGTGTTATCTTAG+CGG + chr7_2:43853324-43853343 None:intergenic 40.0%
TAGAGCTCAGAACTTCTTAG+AGG + chr7_2:43853492-43853511 None:intergenic 40.0%
TGCAACAGCATCAATATGGA+TGG - chr7_2:43853840-43853859 Msa1058760:intron 40.0%
GGATGGTCATGATAGCATTA+TGG - chr7_2:43853857-43853876 Msa1058760:intron 40.0%
!! TTTGACCGGTTTTTACGCTT+AGG + chr7_2:43853954-43853973 None:intergenic 40.0%
! TTTTACACCAATGCCAAGAG+TGG - chr7_2:43853995-43854014 Msa1058760:intron 40.0%
ACAAGAATCCAGTATAGTGG+TGG - chr7_2:43854053-43854072 Msa1058760:intron 40.0%
TCATGCATCATCATATTGGG+TGG + chr7_2:43854122-43854141 None:intergenic 40.0%
AGAAGTCAGCCGAATTGATT+TGG - chr7_2:43854214-43854233 Msa1058760:intron 40.0%
!! GGATGCTCTACCTTTTGAAA+TGG + chr7_2:43854266-43854285 None:intergenic 40.0%
! TTTTGTCACAACATTGTCGC+CGG - chr7_2:43854402-43854421 Msa1058760:intron 40.0%
ATGCAAGTCACAGAATACAC+AGG - chr7_2:43854536-43854555 Msa1058760:intron 40.0%
!! TTAAGGAGTGCTTGAATGGT+TGG - chr7_2:43854579-43854598 Msa1058760:intron 40.0%
!! TAAGGAGTGCTTGAATGGTT+GGG - chr7_2:43854580-43854599 Msa1058760:intron 40.0%
AATGCTTCCTCAAATGACGT+TGG - chr7_2:43854635-43854654 Msa1058760:intron 40.0%
TCGAATTCCAACGTCATTTG+AGG + chr7_2:43854645-43854664 None:intergenic 40.0%
GTGGAATGCAACTTACACAA+TGG - chr7_2:43854919-43854938 Msa1058760:intron 40.0%
!! ACTATAAACCGGTTCGAAAC+CGG - chr7_2:43855316-43855335 Msa1058760:intron 40.0%
!! ATTTTGAACCGGTTTCGAAC+CGG + chr7_2:43855327-43855346 None:intergenic 40.0%
! ACCGGTTCAAAACTGTAAAC+CGG - chr7_2:43855353-43855372 Msa1058760:intron 40.0%
!!! ACCGGTTTACAGTTTTGAAC+CGG + chr7_2:43855357-43855376 None:intergenic 40.0%
! TTTTGCAGTACTCCACACTA+GGG + chr7_2:43855509-43855528 None:intergenic 40.0%
! ATTTTGCAGTACTCCACACT+AGG + chr7_2:43855510-43855529 None:intergenic 40.0%
TCTGCAACTGGGATTTCAAC+AGG - chr7_2:43845292-43845311 Msa1058760:three_prime_UTR 45.0%
GGTTCTTCCTTCAGGTACTT+AGG - chr7_2:43845313-43845332 Msa1058760:three_prime_UTR 45.0%
TCCATATTCGATCCAACGGT+TGG - chr7_2:43845412-43845431 Msa1058760:three_prime_UTR 45.0%
ACCAACCGTTGGATCGAATA+TGG + chr7_2:43845416-43845435 None:intergenic 45.0%
! ACATCTCCCGCACGATTTTT+AGG - chr7_2:43845438-43845457 Msa1058760:three_prime_UTR 45.0%
ATGTAGTTTCCACTGTTGCG+TGG - chr7_2:43845745-43845764 Msa1058760:intron 45.0%
ATTTAACAGCCACGCAACAG+TGG + chr7_2:43845757-43845776 None:intergenic 45.0%
! ACCCCTTTTCAGCACACTTT+TGG - chr7_2:43846205-43846224 Msa1058760:intron 45.0%
! CCCAAAAGTGTGCTGAAAAG+GGG + chr7_2:43846209-43846228 None:intergenic 45.0%
! CCCCTTTTCAGCACACTTTT+GGG - chr7_2:43846206-43846225 Msa1058760:intron 45.0%
TGGTTAACGGTGGTAAGAGA+GGG + chr7_2:43846334-43846353 None:intergenic 45.0%
TCTATCTTCGGTGAGAGTGA+GGG + chr7_2:43846786-43846805 None:intergenic 45.0%
TTCTATCTTCGGTGAGAGTG+AGG + chr7_2:43846787-43846806 None:intergenic 45.0%
GCACATCGCAATAGAAAGAG+CGG - chr7_2:43847445-43847464 Msa1058760:intron 45.0%
CAATAGAAAGAGCGGACAGA+CGG - chr7_2:43847453-43847472 Msa1058760:intron 45.0%
AATAGAAAGAGCGGACAGAC+GGG - chr7_2:43847454-43847473 Msa1058760:intron 45.0%
! CGGAGGGAGTATATAACTAG+TGG + chr7_2:43847499-43847518 None:intergenic 45.0%
GCTTCCACAATGATAGCATC+AGG + chr7_2:43848553-43848572 None:intergenic 45.0%
! GGAAGCTTTTGGATTTCGGT+TGG - chr7_2:43848567-43848586 Msa1058760:CDS 45.0%
GTTTCTCATGTGCGAAGAGT+TGG - chr7_2:43848751-43848770 Msa1058760:intron 45.0%
CCCCTAATCAGTGTTACAAG+TGG + chr7_2:43849008-43849027 None:intergenic 45.0%
CGTGGGTACATAAGGAGATA+TGG + chr7_2:43849299-43849318 None:intergenic 45.0%
TAGACACACGTGGGTACATA+AGG + chr7_2:43849307-43849326 None:intergenic 45.0%
CATGCGAAATAGACACACGT+GGG + chr7_2:43849316-43849335 None:intergenic 45.0%
TCATGCGAAATAGACACACG+TGG + chr7_2:43849317-43849336 None:intergenic 45.0%
TGTCTCTCTTCCTTGTAGTC+TGG - chr7_2:43849400-43849419 Msa1058760:intron 45.0%
!! CTGCTGCTTTGACATCATCA+TGG + chr7_2:43849497-43849516 None:intergenic 45.0%
TATGCCAATGCGGTATCTAC+AGG - chr7_2:43849612-43849631 Msa1058760:intron 45.0%
ACCACATGCTTACAGTATGC+TGG - chr7_2:43849747-43849766 Msa1058760:intron 45.0%
ACCAGCATACTGTAAGCATG+TGG + chr7_2:43849751-43849770 None:intergenic 45.0%
CACAAACACACCAACACCTT+AGG + chr7_2:43849808-43849827 None:intergenic 45.0%
ATTTATGGACGAGAAGCAGC+TGG - chr7_2:43849993-43850012 Msa1058760:intron 45.0%
!! TGAACTGTCGGAGCTTGTTA+TGG - chr7_2:43850226-43850245 Msa1058760:intron 45.0%
!! GAACTGTCGGAGCTTGTTAT+GGG - chr7_2:43850227-43850246 Msa1058760:intron 45.0%
AAGATAGCACAGAGTAGCAG+TGG + chr7_2:43850318-43850337 None:intergenic 45.0%
GTGAGGCATAGAGAAAGAAC+TGG - chr7_2:43850624-43850643 Msa1058760:intron 45.0%
!! CCATTGACTCCACAAGTGAA+AGG + chr7_2:43851009-43851028 None:intergenic 45.0%
CCTTTCACTTGTGGAGTCAA+TGG - chr7_2:43851006-43851025 Msa1058760:intron 45.0%
GTGTCTGTTACAGCTACAAC+AGG + chr7_2:43851278-43851297 None:intergenic 45.0%
AACCTGAAACACCAGATGTC+AGG + chr7_2:43852234-43852253 None:intergenic 45.0%
!! ACATCTGGTGTTTCAGGTTG+AGG - chr7_2:43852235-43852254 Msa1058760:intron 45.0%
!! CATCTGGTGTTTCAGGTTGA+GGG - chr7_2:43852236-43852255 Msa1058760:intron 45.0%
!! GTTTCAGGTTGAGGGTATCA+CGG - chr7_2:43852244-43852263 Msa1058760:intron 45.0%
GCTGAACTGGGTATCAAGTT+TGG - chr7_2:43852317-43852336 Msa1058760:CDS 45.0%
CTGGGTATCAAGTTTGGAAG+AGG - chr7_2:43852323-43852342 Msa1058760:CDS 45.0%
! AGGCTTTTGCCAAGAATCAG+AGG - chr7_2:43852343-43852362 Msa1058760:CDS 45.0%
! CAGTTTGCTCATCTTCAGAG+TGG + chr7_2:43852654-43852673 None:intergenic 45.0%
! TTTAGAGCTAGGTGTGGAGT+AGG - chr7_2:43852728-43852747 Msa1058760:intron 45.0%
TTAGAGCTAGGTGTGGAGTA+GGG - chr7_2:43852729-43852748 Msa1058760:intron 45.0%
!! TCATCATCGATTTGGGGCTA+GGG + chr7_2:43853018-43853037 None:intergenic 45.0%
!! TTCATCATCGATTTGGGGCT+AGG + chr7_2:43853019-43853038 None:intergenic 45.0%
GGATTATACGAATTGGGGCT+AGG + chr7_2:43853120-43853139 None:intergenic 45.0%
! GACGGAGAAGAGTACGAAAA+TGG + chr7_2:43853141-43853160 None:intergenic 45.0%
CAGGTATGCTCATTCTACTG+TGG - chr7_2:43853185-43853204 Msa1058760:intron 45.0%
AGCGTAAAAACCGGTCAAAC+CGG - chr7_2:43853955-43853974 Msa1058760:intron 45.0%
AATGATCCCACATTGCTGAC+CGG + chr7_2:43853977-43853996 None:intergenic 45.0%
CACTTGTTCCACCACTATAC+TGG + chr7_2:43854064-43854083 None:intergenic 45.0%
TGGTGGAACAAGTGCAATGA+GGG - chr7_2:43854070-43854089 Msa1058760:intron 45.0%
ATCAAACTTCGGAACTGCAG+GGG + chr7_2:43854192-43854211 None:intergenic 45.0%
GATCAAACTTCGGAACTGCA+GGG + chr7_2:43854193-43854212 None:intergenic 45.0%
TGATCAAACTTCGGAACTGC+AGG + chr7_2:43854194-43854213 None:intergenic 45.0%
GGTGAACATGTTTGTAGCCT+TGG - chr7_2:43854235-43854254 Msa1058760:intron 45.0%
GTTACCATCTCGCACTACAT+TGG - chr7_2:43854328-43854347 Msa1058760:intron 45.0%
TTTGTCACAACATTGTCGCC+GGG - chr7_2:43854403-43854422 Msa1058760:intron 45.0%
!! ACGGTTAAGGAGTGCTTGAA+TGG - chr7_2:43854575-43854594 Msa1058760:intron 45.0%
TGCTTGAATGGTTGGGAACT+TGG - chr7_2:43854587-43854606 Msa1058760:intron 45.0%
TGACATACCTCACAGCTGAT+CGG + chr7_2:43854805-43854824 None:intergenic 45.0%
!! ACTGTAAACCGGTTCTGAAC+CGG - chr7_2:43855364-43855383 Msa1058760:intron 45.0%
GTTACAGTTCGGTTCAGAAC+CGG + chr7_2:43855386-43855405 None:intergenic 45.0%
! GTTCTGAACCGAACTGTAAC+TGG - chr7_2:43855386-43855405 Msa1058760:intron 45.0%
TTTGCAGTACTCCACACTAG+GGG + chr7_2:43855508-43855527 None:intergenic 45.0%
!! TATATATATATATATATTAC+GGG + chr7_2:43845596-43845615 None:intergenic 5.0%
!!! TGTATATATATATTTTTTTA+GGG + chr7_2:43846052-43846071 None:intergenic 5.0%
!!! ATGTATATATATATTTTTTT+AGG + chr7_2:43846053-43846072 None:intergenic 5.0%
!!! TTTTATTATAAATTATTTCA+TGG - chr7_2:43853525-43853544 Msa1058760:intron 5.0%
AAGAGTCATGTCATGAGCCG+AGG - chr7_2:43845360-43845379 Msa1058760:three_prime_UTR 50.0%
! AGCCGAGGAACAACTTTTCC+AGG - chr7_2:43845375-43845394 Msa1058760:three_prime_UTR 50.0%
! ACTAAAAGGGGTGCAGCAAC+AGG + chr7_2:43845678-43845697 None:intergenic 50.0%
ATTGAATTGGCACGGCACAG+TGG + chr7_2:43845811-43845830 None:intergenic 50.0%
GTGGTAAGAGAGGGTTAACG+AGG + chr7_2:43846325-43846344 None:intergenic 50.0%
GTGGTTAACGGTGGTAAGAG+AGG + chr7_2:43846335-43846354 None:intergenic 50.0%
AATAACAAGCGGCTGCTACG+TGG - chr7_2:43848512-43848531 Msa1058760:CDS 50.0%
GCAGGTGTTTACACCAATCC+TGG + chr7_2:43849250-43849269 None:intergenic 50.0%
ACCTGCTCGCTTTCTACTAC+AGG - chr7_2:43849264-43849283 Msa1058760:CDS 50.0%
ACCTGTAGTAGAAAGCGAGC+AGG + chr7_2:43849268-43849287 None:intergenic 50.0%
TCTCAGTGGCTTTCTTCCGA+GGG - chr7_2:43849339-43849358 Msa1058760:intron 50.0%
TCGTGTACGCTATGCCAATG+CGG - chr7_2:43849602-43849621 Msa1058760:intron 50.0%
GTGTAAAATGGGCAGCACAC+TGG + chr7_2:43850368-43850387 None:intergenic 50.0%
TGGAGCTGTAGACGTGATTG+TGG - chr7_2:43851111-43851130 Msa1058760:intron 50.0%
GTTACAGCTACAACAGGGCT+GGG + chr7_2:43851272-43851291 None:intergenic 50.0%
TGTTACAGCTACAACAGGGC+TGG + chr7_2:43851273-43851292 None:intergenic 50.0%
CCACAAGTGACCTCTTCCAT+AGG + chr7_2:43851965-43851984 None:intergenic 50.0%
CCTATGGAAGAGGTCACTTG+TGG - chr7_2:43851962-43851981 Msa1058760:intron 50.0%
ATGGAAGAGGTCACTTGTGG+TGG - chr7_2:43851965-43851984 Msa1058760:intron 50.0%
GAAACACCAGATGTCAGGAG+AGG + chr7_2:43852229-43852248 None:intergenic 50.0%
CTCCTGACATCTGGTGTTTC+AGG - chr7_2:43852229-43852248 Msa1058760:intron 50.0%
TAGAGCTAGGTGTGGAGTAG+GGG - chr7_2:43852730-43852749 Msa1058760:intron 50.0%
!! TTGGGATCGATTTGGGGCTA+GGG + chr7_2:43853045-43853064 None:intergenic 50.0%
!! TTTGGGATCGATTTGGGGCT+AGG + chr7_2:43853046-43853065 None:intergenic 50.0%
! GGTTCGTCCGAATTTGGGTT+AGG + chr7_2:43853098-43853117 None:intergenic 50.0%
GCTAGGGTTCGTCCGAATTT+GGG + chr7_2:43853103-43853122 None:intergenic 50.0%
! TGACGAGAGTACGAAGACGA+CGG + chr7_2:43853159-43853178 None:intergenic 50.0%
ACCACTGTGTGCTTCTGTGT+CGG + chr7_2:43853886-43853905 None:intergenic 50.0%
GTCCGCCTAAGCGTAAAAAC+CGG - chr7_2:43853946-43853965 Msa1058760:intron 50.0%
!! GACCGGTTTTTACGCTTAGG+CGG + chr7_2:43853951-43853970 None:intergenic 50.0%
!! ACATTGCTGACCGGTTTGAC+CGG + chr7_2:43853968-43853987 None:intergenic 50.0%
GTCAAACCGGTCAGCAATGT+GGG - chr7_2:43853968-43853987 Msa1058760:intron 50.0%
ACACCAATGCCAAGAGTGGA+AGG - chr7_2:43853999-43854018 Msa1058760:intron 50.0%
ACTCCTTCCACTCTTGGCAT+TGG + chr7_2:43854005-43854024 None:intergenic 50.0%
GCCAAGAGTGGAAGGAGTAA+AGG - chr7_2:43854007-43854026 Msa1058760:intron 50.0%
GCCTTTACTCCTTCCACTCT+TGG + chr7_2:43854011-43854030 None:intergenic 50.0%
! GTGGTGGAACAAGTGCAATG+AGG - chr7_2:43854069-43854088 Msa1058760:intron 50.0%
TGTCAGTGGTGAGACAAACC+CGG + chr7_2:43854424-43854443 None:intergenic 50.0%
TTTGTCTCACCACTGACACG+TGG - chr7_2:43854426-43854445 Msa1058760:intron 50.0%
TGTTGATGTCCACGTGTCAG+TGG + chr7_2:43854438-43854457 None:intergenic 50.0%
TCGTGTGCTTAGTGTGACAG+TGG - chr7_2:43854610-43854629 Msa1058760:intron 50.0%
!! ATGGAGAGCACCTTCACACA+CGG - chr7_2:43854708-43854727 Msa1058760:intron 50.0%
TCAGCCCGTCCTTCACAATA+AGG + chr7_2:43854754-43854773 None:intergenic 50.0%
TGAGAATCCGATCAGCTGTG+AGG - chr7_2:43854795-43854814 Msa1058760:intron 50.0%
! TTGGGCTAGATTGTGAGACG+CGG - chr7_2:43854897-43854916 Msa1058760:intron 50.0%
! GTTCAGAACCGGTTCAGAAC+CGG + chr7_2:43855375-43855394 None:intergenic 50.0%
AACCATGAACACCCCTAGTG+TGG - chr7_2:43855494-43855513 Msa1058760:intron 50.0%
GGCTGCTACGTGGAACTTTG+AGG - chr7_2:43848522-43848541 Msa1058760:CDS 55.0%
CTCTCAGTGGCTTTCTTCCG+AGG - chr7_2:43849338-43849357 Msa1058760:intron 55.0%
GCTCGCTAGCGAGTTTAGCA+AGG - chr7_2:43849551-43849570 Msa1058760:intron 55.0%
GGAGCCTGTAGATACCGCAT+TGG + chr7_2:43849619-43849638 None:intergenic 55.0%
!! CCAAAAGCATTTGGGGGACG+CGG - chr7_2:43851938-43851957 Msa1058760:intron 55.0%
TATCACGGTCTGTGCGCAAG+TGG - chr7_2:43852259-43852278 Msa1058760:intron 55.0%
GGCTAGGGTTCGTCCGAATT+TGG + chr7_2:43853104-43853123 None:intergenic 55.0%
CGTACTCTCGTCATCGTCAC+AGG - chr7_2:43853166-43853185 Msa1058760:intron 55.0%
! TCCGACACAGAAGCACACAG+TGG - chr7_2:43853882-43853901 Msa1058760:intron 55.0%
GGTCAAACCGGTCAGCAATG+TGG - chr7_2:43853967-43853986 Msa1058760:intron 55.0%
CGTGCCAATGTAGTGCGAGA+TGG + chr7_2:43854335-43854354 None:intergenic 55.0%
!! CTCCACACTAGGGGTGTTCA+TGG + chr7_2:43855499-43855518 None:intergenic 55.0%
GGGAGATGTGCACCAACCGT+TGG + chr7_2:43845427-43845446 None:intergenic 60.0%
! AATGGGCAGCACACTGGCTG+TGG + chr7_2:43850362-43850381 None:intergenic 60.0%
TCGGGACAAGAGCAGCAACC+TGG + chr7_2:43851669-43851688 None:intergenic 60.0%
! CCGCGTCCCCCAAATGCTTT+TGG + chr7_2:43851941-43851960 None:intergenic 60.0%
ATTTGGGGGACGCGGACCTA+TGG - chr7_2:43851946-43851965 Msa1058760:intron 60.0%
GTGCTGGAGCTCGTCGATGA+CGG - chr7_2:43853460-43853479 Msa1058760:intron 60.0%
GGCTAGATTGTGAGACGCGG+TGG - chr7_2:43854900-43854919 Msa1058760:intron 60.0%
GGGACGCGGACCTATGGAAG+AGG - chr7_2:43851952-43851971 Msa1058760:intron 65.0%
GGGCGCAGCACCGTGTGTGA+AGG + chr7_2:43854721-43854740 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 43845282 43855698 43845282 ID=Msa1058760;Name=Msa1058760
chr7_2 mRNA 43845282 43855698 43845282 ID=Msa1058760-mRNA-1;Parent=Msa1058760;Name=Msa1058760-mRNA-1;_AED=0.48;_eAED=0.48;_QI=0|0.77|0.7|0.8|0.88|0.8|10|397|436
chr7_2 exon 43845282 43845469 43845282 ID=Msa1058760-mRNA-1:exon:7966;Parent=Msa1058760-mRNA-1
chr7_2 exon 43848242 43848729 43848242 ID=Msa1058760-mRNA-1:exon:7965;Parent=Msa1058760-mRNA-1
chr7_2 exon 43848920 43849054 43848920 ID=Msa1058760-mRNA-1:exon:7964;Parent=Msa1058760-mRNA-1
chr7_2 exon 43849164 43849310 43849164 ID=Msa1058760-mRNA-1:exon:7963;Parent=Msa1058760-mRNA-1
chr7_2 exon 43849839 43850011 43849839 ID=Msa1058760-mRNA-1:exon:7962;Parent=Msa1058760-mRNA-1
chr7_2 exon 43850915 43851002 43850915 ID=Msa1058760-mRNA-1:exon:7961;Parent=Msa1058760-mRNA-1
chr7_2 exon 43851300 43851523 43851300 ID=Msa1058760-mRNA-1:exon:7960;Parent=Msa1058760-mRNA-1
chr7_2 exon 43851695 43851755 43851695 ID=Msa1058760-mRNA-1:exon:7959;Parent=Msa1058760-mRNA-1
chr7_2 exon 43852278 43852436 43852278 ID=Msa1058760-mRNA-1:exon:7958;Parent=Msa1058760-mRNA-1
chr7_2 exon 43855654 43855698 43855654 ID=Msa1058760-mRNA-1:exon:7957;Parent=Msa1058760-mRNA-1
chr7_2 CDS 43855654 43855698 43855654 ID=Msa1058760-mRNA-1:cds;Parent=Msa1058760-mRNA-1
chr7_2 CDS 43852278 43852436 43852278 ID=Msa1058760-mRNA-1:cds;Parent=Msa1058760-mRNA-1
chr7_2 CDS 43851695 43851755 43851695 ID=Msa1058760-mRNA-1:cds;Parent=Msa1058760-mRNA-1
chr7_2 CDS 43851300 43851523 43851300 ID=Msa1058760-mRNA-1:cds;Parent=Msa1058760-mRNA-1
chr7_2 CDS 43850915 43851002 43850915 ID=Msa1058760-mRNA-1:cds;Parent=Msa1058760-mRNA-1
chr7_2 CDS 43849839 43850011 43849839 ID=Msa1058760-mRNA-1:cds;Parent=Msa1058760-mRNA-1
chr7_2 CDS 43849164 43849310 43849164 ID=Msa1058760-mRNA-1:cds;Parent=Msa1058760-mRNA-1
chr7_2 CDS 43848920 43849054 43848920 ID=Msa1058760-mRNA-1:cds;Parent=Msa1058760-mRNA-1
chr7_2 CDS 43848451 43848729 43848451 ID=Msa1058760-mRNA-1:cds;Parent=Msa1058760-mRNA-1
chr7_2 three_prime_UTR 43848242 43848450 43848242 ID=Msa1058760-mRNA-1:three_prime_utr;Parent=Msa1058760-mRNA-1
chr7_2 three_prime_UTR 43845282 43845469 43845282 ID=Msa1058760-mRNA-1:three_prime_utr;Parent=Msa1058760-mRNA-1
Gene Sequence

>Msa1058760

ATGGCTTTCATCTGCAACTGGGATTTCAACAGGTTCTTCCTTCAGGCACTTCCTGATGCTATCATTGTGGAAGCTTTTGGATTTCGGTTGGCAATTCAATTTGCCTATGATATGTGTTTTAGAAACATTATCGTGGAAGATGATTCTCTTAATGTGGTTAAGGCTTTGAAGTCACATAGTGATGACAATTCTTATTTTGGCTTGAATGGATTTAGAGAAATAATGACCAGGATTGGTGTAAACACCTGCTCGCTTTCTACTACAGTTTCAGCTGAAGCTTCAGATTTAGAATGCGATGCGATCCATGATGATGTCAAAGCAGCAGAGAAAAATAACGCACTTTGTTTGGCTGTCTCACAGCTCGCTAGCGAGTTTAGCAAGGAGTCAATGTTATCTTTGCAGAAGTTTTTTCGTGTACGCTATGCCAATGCGGTATCTACAGGCTCCTTGAAGCTTGATATAGCTCTTGGAATTGGAGGATTACCAAAGGGTAGGATTGTTGAAATTTATGGACGAGAAGCAGCTGGTAAGACAACACTTGCCCTTCAAATTATTAAAGAAGCTCAAAAGCTTGGAGGATATTGTGCATATCTTGATGTAGAAAGTGCATTAGACCTTTCACTTGTGGAGTCAATGGGTGTAAATACCAAAAACCTTCTTATCTCTAATCCTGATTGTGCTGAAAATTTGTTGAGCATGGTTGATACACTAACAAAAAGTGGAGCTGTAGACGTGATTGTGGTTGACAGTGTTGCTGCTCTTGTCCCGAAATGCGAACTTGATCAATTAGGAGTTGCTACAAATCAAGATTTGCATTCGCGAATAATGACTCAAGCACTACGGAAAATTCATTATTCATTATCCCGCTCCCAAACTCTCTTAATTTTTGTTAATCAGGTTAGATTTAGTCCAAAAGCATTTGGGGGACGCGGACCTATGGAAGAGGTCACTTGTGGTGGAAATGCTTTGAGATTCTACGCAGCTGTTCGTTTGCGACTTTCAAGAATGGGATTGATAAAAACTGAAGATAAGGTTGAGGGTATCACGGTCTGTGCGCAAGTGGTAAAAAATAAACTAGCACCAGCAGCAATGAAAAAAGCTGAACTGGGTATCAAGTTTGGAAGAGGCTTTTGCCAAGAATCAGAGGTCTTTGATTTGGCTTGTGAACATGGACTCATTATGAAAGATGAGGGAAACTACTTCATTGAAGGGGAGCCTTTTACTAGTAGAGAAGCTGCTGAACAATTTTTGGCTAAAAATAAAAGGATTTGTGACAAGTTAGTTATGGACATGAAAAGACTTTATCTTTAG

Protein sequence

>Msa1058760

MAFICNWDFNRFFLQALPDAIIVEAFGFRLAIQFAYDMCFRNIIVEDDSLNVVKALKSHSDDNSYFGLNGFREIMTRIGVNTCSLSTTVSAEASDLECDAIHDDVKAAEKNNALCLAVSQLASEFSKESMLSLQKFFRVRYANAVSTGSLKLDIALGIGGLPKGRIVEIYGREAAGKTTLALQIIKEAQKLGGYCAYLDVESALDLSLVESMGVNTKNLLISNPDCAENLLSMVDTLTKSGAVDVIVVDSVAALVPKCELDQLGVATNQDLHSRIMTQALRKIHYSLSRSQTLLIFVNQVRFSPKAFGGRGPMEEVTCGGNALRFYAAVRLRLSRMGLIKTEDKVEGITVCAQVVKNKLAPAAMKKAELGIKFGRGFCQESEVFDLACEHGLIMKDEGNYFIEGEPFTSREAAEQFLAKNKRICDKLVMDMKRLYL*