AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1040890


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1040890 MtrunA17_Chr7g0270251 79.677 433 3 3 1 348 1 433 0.0 666
Msa1040890 MtrunA17_Chr1g0194351 64.183 349 79 4 25 327 60 408 1.40e-148 425
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1040890 AT2G47210.3 55.023 438 105 6 2 348 5 441 1.14e-151 434
Msa1040890 AT2G47210.1 55.023 438 105 6 2 348 5 441 1.14e-151 434
Msa1040890 AT2G47210.2 55.023 438 105 6 2 348 5 441 1.14e-151 434

Find 116 sgRNAs with CRISPR-Local

Find 468 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATACCAATATACCTGTTTC+TGG 0.156332 7_1:-78402539 None:intergenic
AATATCCTTCGCGTCCATTT+AGG 0.193541 7_1:-78398595 None:intergenic
GAGAAATTGAGAGGGAAAAT+TGG 0.199779 7_1:+78398514 Msa1040890:five_prime_UTR
ATTCCCGATTCGTTGAATTT+TGG 0.213340 7_1:+78402961 Msa1040890:CDS
CTTGCCAGGGCTGCATCTTC+CGG 0.253582 7_1:+78400384 Msa1040890:CDS
TTTCTCTTGTTGTCTTGTTT+GGG 0.260220 7_1:-78400643 None:intergenic
ATTTCTTGTGAAACATTATA+TGG 0.283878 7_1:-78400588 None:intergenic
TCGGACTGTAGAGGAGTTAA+AGG 0.299488 7_1:+78400153 Msa1040890:CDS
CAGTCTTATGGATATTTATA+TGG 0.300076 7_1:+78404905 Msa1040890:three_prime_UTR
TTTGACTTCACCTTAATGAT+AGG 0.315672 7_1:-78400423 None:intergenic
TTGCCAGGGCTGCATCTTCC+GGG 0.316334 7_1:+78400385 Msa1040890:CDS
ATATCCTTCGCGTCCATTTA+GGG 0.321840 7_1:-78398594 None:intergenic
AGGCGAAAGGGTTGGCAAAA+AGG 0.324610 7_1:+78403088 Msa1040890:intron
TGTTCCTATGAAACCCTAAA+TGG 0.331803 7_1:+78398581 Msa1040890:exon
TGCAACACATCCTATCATTA+AGG 0.347399 7_1:+78400413 Msa1040890:CDS
ATGGACGCGAAGGATATTCT+TGG 0.347443 7_1:+78398600 Msa1040890:CDS
CAAAACCTTCAAGAGTTTGA+TGG 0.348446 7_1:-78405064 None:intergenic
AATTTGTACAATTCCTTTCA+AGG 0.357978 7_1:+78404870 Msa1040890:three_prime_UTR
GCGTCCATTTAGGGTTTCAT+AGG 0.370836 7_1:-78398585 None:intergenic
CACAAGAAATGGAGCGAAAA+CGG 0.373448 7_1:+78400601 Msa1040890:CDS
ATATAATGTTTCACAAGAAA+TGG 0.380297 7_1:+78400590 Msa1040890:CDS
TTTAGCTACCTTGTTGTACT+TGG 0.384441 7_1:-78399478 None:intergenic
TCCCTGTCATGTAGTGTTGC+GGG 0.387723 7_1:+78400353 Msa1040890:intron
TGACAAATTTAAGCTCTTAC+CGG 0.389119 7_1:-78403316 None:intergenic
CGAGTTACGGATGGCTTCTA+AGG 0.391035 7_1:+78400807 Msa1040890:CDS
ACCTCCAAAATTCAACGAAT+CGG 0.405812 7_1:-78402965 None:intergenic
CTTGTTGTCTTGTTTGGGAG+AGG 0.408483 7_1:-78400638 None:intergenic
TTTCCGACCTTTGGTGTGCC+TGG 0.419064 7_1:-78402831 None:intergenic
TTCAGCTTCGTGTATATTTG+AGG 0.419331 7_1:+78402092 Msa1040890:intron
TCCTCTACAGTCCGAGATGA+TGG 0.419890 7_1:-78400145 None:intergenic
AGCAAACATTGCAAGATCTC+GGG 0.423802 7_1:+78402185 Msa1040890:CDS
ATCAGGACTCAAAATCGAAT+TGG 0.424272 7_1:+78405115 Msa1040890:three_prime_UTR
TGCGGGCTATATTACTTGCC+AGG 0.427836 7_1:+78400370 Msa1040890:CDS
CAAAAGTTAAAAGCTTTCCC+TGG 0.432861 7_1:-78404992 None:intergenic
ACAAGAAATGGAGCGAAAAC+GGG 0.436669 7_1:+78400602 Msa1040890:CDS
GGTTACTGAACAGTCTCAAT+TGG 0.436817 7_1:+78401507 Msa1040890:intron
GTCAATGGTGTTCTACCTAC+TGG 0.449074 7_1:+78399441 Msa1040890:CDS
ATGGCTGAATCTCCAGAAAC+AGG 0.450187 7_1:+78402527 Msa1040890:CDS
GCAGAAGGCACAACCATTTG+TGG 0.456839 7_1:-78401610 None:intergenic
TAATTCATTTGTCTCCTCCT+TGG 0.460992 7_1:-78400068 None:intergenic
AACTGTTGTTTCAGGCGAAA+GGG 0.463388 7_1:+78403076 Msa1040890:intron
CCTCCAAAATTCAACGAATC+GGG 0.465713 7_1:-78402964 None:intergenic
CAAGCTTCAAACTCAACTGC+TGG 0.466195 7_1:+78402139 Msa1040890:CDS
CTGGAGTTCGGACTATCAAA+CGG 0.471345 7_1:+78402158 Msa1040890:CDS
CCTCGGATCTTTAATTCCTC+CGG 0.474183 7_1:+78403297 Msa1040890:exon
GACATATGCACTCGAGCAAA+TGG 0.476593 7_1:+78402114 Msa1040890:CDS
GAATGTGCAACTTCCACAAA+TGG 0.479963 7_1:+78401597 Msa1040890:CDS
GAGCAAACATTGCAAGATCT+CGG 0.481522 7_1:+78402184 Msa1040890:CDS
TAAAAGACCTAGAAAACAAA+AGG 0.485836 7_1:+78403274 Msa1040890:CDS
GCGAAAACGGGCACTGTCCA+TGG 0.488734 7_1:+78400614 Msa1040890:CDS
TTTCAGGTTCGAGTAGTCAA+TGG 0.491064 7_1:+78399426 Msa1040890:intron
ACCTAGAAAACAAAAGGCCT+CGG 0.494235 7_1:+78403280 Msa1040890:CDS
GATATCAATAAAACCTTGAA+AGG 0.501183 7_1:-78404883 None:intergenic
GTCCCCGGAAGATGCAGCCC+TGG 0.501841 7_1:-78400388 None:intergenic
AAACTGTTGTTTCAGGCGAA+AGG 0.502998 7_1:+78403075 Msa1040890:intron
CTTATGGATATTTATATGGA+AGG 0.504130 7_1:+78404909 Msa1040890:three_prime_UTR
AGCAGCCATCAAACTCTTGA+AGG 0.508403 7_1:+78405059 Msa1040890:three_prime_UTR
ACAAGAGAAAAGAGATGAAG+AGG 0.510309 7_1:+78400656 Msa1040890:CDS
CAAACTCAACTGCTGGAGTT+CGG 0.511526 7_1:+78402146 Msa1040890:CDS
ATCACGGAAAGATGAACCTT+CGG 0.512389 7_1:-78402790 None:intergenic
ACCTCGCGTGAAATGCCATC+AGG 0.515608 7_1:-78398696 None:intergenic
GTCCCTGTCATGTAGTGTTG+CGG 0.515697 7_1:+78400352 Msa1040890:intron
ACTTTATTTGTATAGGGGCA+TGG 0.516874 7_1:+78403230 Msa1040890:intron
TTTACCCCAATTGAATTGAA+AGG 0.522303 7_1:+78398550 Msa1040890:five_prime_UTR
ATAGTATAACGTCGAAGCAT+CGG 0.523598 7_1:+78398475 Msa1040890:five_prime_UTR
GAGAGGGAAAATTGGAGCGG+AGG 0.541807 7_1:+78398522 Msa1040890:five_prime_UTR
CGAACAGTTGAGAAATTGAG+AGG 0.542121 7_1:+78398505 Msa1040890:five_prime_UTR
TGGAGTTCGGACTATCAAAC+GGG 0.542516 7_1:+78402159 Msa1040890:CDS
TCTTTCCGTGATGGATCCTA+CGG 0.547451 7_1:+78402801 Msa1040890:CDS
TTAAAGGATCGATATTATAG+TGG 0.547811 7_1:+78400169 Msa1040890:CDS
GAAGGTTCATCTTTCCGTGA+TGG 0.548182 7_1:+78402792 Msa1040890:CDS
AAAACCTTTCAATTCAATTG+GGG 0.548532 7_1:-78398554 None:intergenic
AAAAGTTAAAAGCTTTCCCT+GGG 0.550959 7_1:-78404991 None:intergenic
CTTAGAAGCCATCCGTAACT+CGG 0.558886 7_1:-78400806 None:intergenic
GTTGCAGAGAGGGCTGTCCC+TGG 0.559311 7_1:+78401556 Msa1040890:CDS
TGTGGAAGTTGCACATTCGA+AGG 0.559456 7_1:-78401592 None:intergenic
TATCAGCTATAACAACAAAA+CGG 0.560637 7_1:-78400117 None:intergenic
GTTGTTTCAGGCGAAAGGGT+TGG 0.562497 7_1:+78403080 Msa1040890:intron
TTTCTCTGAGATTCTTTGGG+AGG 0.563303 7_1:-78398672 None:intergenic
TGCCAGGGCTGCATCTTCCG+GGG 0.572929 7_1:+78400386 Msa1040890:CDS
TCCAGGTAAATTTGAAACCG+AGG 0.579026 7_1:+78402448 Msa1040890:intron
CCAGGTAAATTTGAAACCGA+GGG 0.579215 7_1:+78402449 Msa1040890:intron
CTGATAGGTTCCCATCATCT+CGG 0.582805 7_1:+78400134 Msa1040890:CDS
TCTTGTTTGGGAGAGGACCA+TGG 0.585148 7_1:-78400631 None:intergenic
AATGAGAATTATGAATGTTG+TGG 0.587741 7_1:+78405034 Msa1040890:three_prime_UTR
ACCTGATGGCATTTCACGCG+AGG 0.587818 7_1:+78398695 Msa1040890:CDS
GCGGGCTATATTACTTGCCA+GGG 0.590495 7_1:+78400371 Msa1040890:CDS
CCTCTACAGTCCGAGATGAT+GGG 0.592270 7_1:-78400144 None:intergenic
TGTGCCTGGTGTTTCACCGT+AGG 0.598536 7_1:-78402817 None:intergenic
GGATCCTACGGTGAAACACC+AGG 0.600080 7_1:+78402813 Msa1040890:CDS
CTGTCAGGCGCAATGTGGAA+AGG 0.601488 7_1:+78404841 Msa1040890:intron
GTGGCAGGTGCAATATAAAG+AGG 0.604781 7_1:+78402767 Msa1040890:intron
GAAACCCTAAATGGACGCGA+AGG 0.605606 7_1:+78398590 Msa1040890:exon
CCCATCATCTCGGACTGTAG+AGG 0.606561 7_1:+78400144 Msa1040890:CDS
TGATGCAGAAGTTGCAGAGA+GGG 0.607610 7_1:+78401546 Msa1040890:CDS
GAAGGAGATACAGTTTCACC+AGG 0.611694 7_1:-78401574 None:intergenic
AAGAATAGCCGAGTTACGGA+TGG 0.620429 7_1:+78400798 Msa1040890:CDS
GAACAGTTGAGAAATTGAGA+GGG 0.620892 7_1:+78398506 Msa1040890:five_prime_UTR
GCAAAAGAATAGTCTCCAGT+AGG 0.625902 7_1:-78399456 None:intergenic
AATTATTTGATTTGTGTGAG+AGG 0.630139 7_1:+78400086 Msa1040890:CDS
ATTGAGAGGGAAAATTGGAG+CGG 0.634070 7_1:+78398519 Msa1040890:five_prime_UTR
CAAATTTAAGCTCTTACCGG+AGG 0.645111 7_1:-78403313 None:intergenic
GAATCTCAGAGAAAACCTGA+TGG 0.650054 7_1:+78398681 Msa1040890:CDS
GCAAACATTGCAAGATCTCG+GGG 0.655130 7_1:+78402186 Msa1040890:CDS
AGGATGTGTTGCAATGTCCC+CGG 0.656289 7_1:-78400403 None:intergenic
TGAAACACCAGGCACACCAA+AGG 0.660161 7_1:+78402824 Msa1040890:CDS
CCGGAGGAATTAAAGATCCG+AGG 0.665879 7_1:-78403297 None:intergenic
GTGCAATATAAAGAGGCCGA+AGG 0.666909 7_1:+78402774 Msa1040890:CDS
GTATAACGTCGAAGCATCGG+AGG 0.667484 7_1:+78398478 Msa1040890:five_prime_UTR
ATCTACCTAGATGTGGACCA+AGG 0.676327 7_1:+78400051 Msa1040890:intron
GTTATCTGTCAGGCGCAATG+TGG 0.686706 7_1:+78404836 Msa1040890:intron
TAAGAAGAGAAATACTAACA+TGG 0.691447 7_1:+78402508 Msa1040890:CDS
CTGATGCAGAAGTTGCAGAG+AGG 0.692246 7_1:+78401545 Msa1040890:CDS
TTTCACCGTAGGATCCATCA+CGG 0.706383 7_1:-78402806 None:intergenic
AAGGAGATACAGTTTCACCA+GGG 0.739390 7_1:-78401573 None:intergenic
TACCTAGATGTGGACCAAGG+AGG 0.740553 7_1:+78400054 Msa1040890:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTATTCATTTTTTTTTTT+TGG + chr7_1:78398741-78398760 Msa1040890:intron 10.0%
!!! AATTGAATTGTATTATTTTT+AGG + chr7_1:78398787-78398806 Msa1040890:intron 10.0%
!!! TCAAATAATTTTTTTTAATG+AGG + chr7_1:78402007-78402026 Msa1040890:intron 10.0%
!!! CAAATAATTTTTTTTAATGA+GGG + chr7_1:78402008-78402027 Msa1040890:intron 10.0%
!!! AAATAATTTTTTTTAATGAG+GGG + chr7_1:78402009-78402028 Msa1040890:intron 10.0%
!! TAATTAAATCAAAGAAATTT+GGG - chr7_1:78402732-78402751 None:intergenic 10.0%
!!! ATTAATTTTACATTTACTTT+TGG + chr7_1:78403168-78403187 Msa1040890:intron 10.0%
!! AAAACAAAATTAAAAAAACA+AGG + chr7_1:78403832-78403851 Msa1040890:intron 10.0%
!!! TTTTTTTTTTTTTTTTGCAT+AGG + chr7_1:78404684-78404703 Msa1040890:intron 10.0%
!!! TTTTTTTTTTTTTTTGCATA+GGG + chr7_1:78404685-78404704 Msa1040890:intron 10.0%
!! ACATAAAATAAATTTCAGTT+CGG - chr7_1:78399732-78399751 None:intergenic 15.0%
!! TATATGATATATTGTACAAT+GGG - chr7_1:78399892-78399911 None:intergenic 15.0%
!! ATATATGATATATTGTACAA+TGG - chr7_1:78399893-78399912 None:intergenic 15.0%
!!! GTATTATTTTTTTTCTTTGA+AGG - chr7_1:78400688-78400707 None:intergenic 15.0%
!! AATAAGATATTAAATGACTA+AGG - chr7_1:78401236-78401255 None:intergenic 15.0%
!!! ATTGATTTTATACATTTTTC+AGG + chr7_1:78401486-78401505 Msa1040890:intron 15.0%
!! AATTAAATCAAAGAAATTTG+GGG - chr7_1:78402731-78402750 None:intergenic 15.0%
!! GTAATTAAATCAAAGAAATT+TGG - chr7_1:78402733-78402752 None:intergenic 15.0%
!! TTCTAAATTTCTATAAAGTA+AGG + chr7_1:78403017-78403036 Msa1040890:intron 15.0%
!! TCTAAATTTCTATAAAGTAA+GGG + chr7_1:78403018-78403037 Msa1040890:intron 15.0%
!! TATGTTTAATGATAAATAGA+TGG - chr7_1:78403049-78403068 None:intergenic 15.0%
!! TAATTAGACAAAAAAAATTG+TGG - chr7_1:78403133-78403152 None:intergenic 15.0%
!! ATGTAAAATTAATCAATTGA+CGG - chr7_1:78403161-78403180 None:intergenic 15.0%
!! GTAATAGTACATTATTAAAA+TGG - chr7_1:78403195-78403214 None:intergenic 15.0%
!!! TTTTAATAATGTACTATTAC+TGG + chr7_1:78403195-78403214 Msa1040890:intron 15.0%
!!! TTAGTAATTTAAAATACAAG+TGG - chr7_1:78403575-78403594 None:intergenic 15.0%
!!! CTTGTAATTTCAATATTTTT+TGG - chr7_1:78404637-78404656 None:intergenic 15.0%
!! CAAAAAATATTGAAATTACA+AGG + chr7_1:78404635-78404654 Msa1040890:intron 15.0%
!!! TTTTTTTTTTTTTTGCATAG+GGG + chr7_1:78404686-78404705 Msa1040890:intron 15.0%
!! AAAAACCTTTCAATTCAATT+GGG - chr7_1:78398558-78398577 None:intergenic 20.0%
!!! TTTTTATTATCAAGAGAAGA+TGG - chr7_1:78398645-78398664 None:intergenic 20.0%
!! AAAAAATGAATAAAGTGAGT+GGG - chr7_1:78398736-78398755 None:intergenic 20.0%
!! AAAAAAATGAATAAAGTGAG+TGG - chr7_1:78398737-78398756 None:intergenic 20.0%
!! CTTACATATAAGTTTATCTA+TGG + chr7_1:78399028-78399047 Msa1040890:intron 20.0%
!!! TACAGTTTTTTGGAAATTTA+TGG + chr7_1:78399663-78399682 Msa1040890:intron 20.0%
!! GCAATCAATTTATATATCAA+TGG + chr7_1:78399828-78399847 Msa1040890:intron 20.0%
!! ATATGATATATTGTACAATG+GGG - chr7_1:78399891-78399910 None:intergenic 20.0%
!! ATTTCTTGTGAAACATTATA+TGG - chr7_1:78400591-78400610 None:intergenic 20.0%
!! ATATAATGTTTCACAAGAAA+TGG + chr7_1:78400590-78400609 Msa1040890:CDS 20.0%
!!! CTTATATTGTTTTATTTTGC+AGG + chr7_1:78400759-78400778 Msa1040890:intron 20.0%
!! TTAAAAAGTGACACTTAAAA+AGG - chr7_1:78401139-78401158 None:intergenic 20.0%
!! TTAAAAAGTGACAGTTAAAT+AGG + chr7_1:78401379-78401398 Msa1040890:intron 20.0%
!! TAAAAAGTGACAGTTAAATA+GGG + chr7_1:78401380-78401399 Msa1040890:intron 20.0%
!! ATTTGATATTTCGCTATTTA+GGG - chr7_1:78401734-78401753 None:intergenic 20.0%
!! AATTTGATATTTCGCTATTT+AGG - chr7_1:78401735-78401754 None:intergenic 20.0%
!! ATTAAGAAAGATGGTTAATT+TGG - chr7_1:78402311-78402330 None:intergenic 20.0%
!! ATTAAATCAAAGAAATTTGG+GGG - chr7_1:78402730-78402749 None:intergenic 20.0%
!! TTTATAGAAATTTAGAAAGC+AGG - chr7_1:78403014-78403033 None:intergenic 20.0%
!! TGTAAAATTAATCAATTGAC+GGG - chr7_1:78403160-78403179 None:intergenic 20.0%
!! TGTTAAGCATCATATTTAAT+TGG + chr7_1:78403359-78403378 Msa1040890:intron 20.0%
!! GTTAAGCATCATATTTAATT+GGG + chr7_1:78403360-78403379 Msa1040890:intron 20.0%
!! TCATATTTAATTGGGTTAAA+TGG + chr7_1:78403368-78403387 Msa1040890:intron 20.0%
!! TCATATCTTAATTTCAAGAA+CGG + chr7_1:78403688-78403707 Msa1040890:intron 20.0%
!!! TTAATTTTGTTTTTGTACGA+GGG - chr7_1:78403825-78403844 None:intergenic 20.0%
!!! TTTAATTTTGTTTTTGTACG+AGG - chr7_1:78403826-78403845 None:intergenic 20.0%
!! AAATATTGAAATTACAAGGT+TGG + chr7_1:78404639-78404658 Msa1040890:intron 20.0%
!!! TTTTTTTTTTTTTGCATAGG+GGG + chr7_1:78404687-78404706 Msa1040890:intron 20.0%
!!! TTTTATTGATATCAGTCTTA+TGG + chr7_1:78404893-78404912 Msa1040890:three_prime_UTR 20.0%
! AAAACCTTTCAATTCAATTG+GGG - chr7_1:78398557-78398576 None:intergenic 25.0%
! CAAAAACCTTTCAATTCAAT+TGG - chr7_1:78398559-78398578 None:intergenic 25.0%
!! CAATTGAATTGAAAGGTTTT+TGG + chr7_1:78398557-78398576 Msa1040890:five_prime_UTR 25.0%
!! TTGTTTTCATAAGCTATCAT+GGG - chr7_1:78399139-78399158 None:intergenic 25.0%
! TATTACGATGATTATCCAAA+CGG + chr7_1:78399241-78399260 Msa1040890:intron 25.0%
!!! ATTATGTTTTTCAGGTTACT+TGG + chr7_1:78399268-78399287 Msa1040890:intron 25.0%
! CCAAAAATATAGCAATGAAT+AGG - chr7_1:78399531-78399550 None:intergenic 25.0%
!! CCTATTCATTGCTATATTTT+TGG + chr7_1:78399528-78399547 Msa1040890:intron 25.0%
!!! TGTCTAATTGTACAGTTTTT+TGG + chr7_1:78399653-78399672 Msa1040890:intron 25.0%
! AAGTTTAGACATGAAAAATG+AGG + chr7_1:78399797-78399816 Msa1040890:intron 25.0%
! AGTTTAGACATGAAAAATGA+GGG + chr7_1:78399798-78399817 Msa1040890:intron 25.0%
! AATTTATATATCAATGGACC+TGG + chr7_1:78399834-78399853 Msa1040890:intron 25.0%
! TTAACAAATGCAGTTAAAAC+AGG - chr7_1:78399922-78399941 None:intergenic 25.0%
! ATATTAATGCATTGAACACT+TGG - chr7_1:78400016-78400035 None:intergenic 25.0%
!!! AATTATTTGATTTGTGTGAG+AGG + chr7_1:78400086-78400105 Msa1040890:CDS 25.0%
! TATCAGCTATAACAACAAAA+CGG - chr7_1:78400120-78400139 None:intergenic 25.0%
! TTAAAGGATCGATATTATAG+TGG + chr7_1:78400169-78400188 Msa1040890:CDS 25.0%
! TACCAATACACCATTAATTT+AGG + chr7_1:78400850-78400869 Msa1040890:intron 25.0%
! GATAACAACTCCTAAATTAA+TGG - chr7_1:78400863-78400882 None:intergenic 25.0%
! AGAAATCAGAATTAGATCAT+AGG - chr7_1:78400905-78400924 None:intergenic 25.0%
!!! TAATATTCAAAGTGATGGAT+AGG - chr7_1:78400950-78400969 None:intergenic 25.0%
! TATCCATCACTTTGAATATT+AGG + chr7_1:78400949-78400968 Msa1040890:intron 25.0%
! ATCCATCACTTTGAATATTA+GGG + chr7_1:78400950-78400969 Msa1040890:intron 25.0%
! TCTCCACAATAAATAACTAA+GGG + chr7_1:78401269-78401288 Msa1040890:intron 25.0%
! TTACCCTTAGTTATTTATTG+TGG - chr7_1:78401275-78401294 None:intergenic 25.0%
! TAAATAACTAAGGGTAATGT+TGG + chr7_1:78401278-78401297 Msa1040890:intron 25.0%
! TTTGAAAGTGACAGTTAAAT+AGG + chr7_1:78401329-78401348 Msa1040890:intron 25.0%
! ATGTATAAAATCAATATCCC+AGG - chr7_1:78401481-78401500 None:intergenic 25.0%
! TACAATTTCAGAACACAAAA+TGG - chr7_1:78401691-78401710 None:intergenic 25.0%
!!! AATTTTGAAGATCAGAATTC+TGG - chr7_1:78401962-78401981 None:intergenic 25.0%
! GATTCTACTATCTAATTCAT+GGG - chr7_1:78402335-78402354 None:intergenic 25.0%
! AGATTCTACTATCTAATTCA+TGG - chr7_1:78402336-78402355 None:intergenic 25.0%
! GATAGTAGAATCTTATATTG+AGG + chr7_1:78402343-78402362 Msa1040890:intron 25.0%
! CTCGTTACAAAAATTTCATT+TGG - chr7_1:78402385-78402404 None:intergenic 25.0%
! TAAGAAGAGAAATACTAACA+TGG + chr7_1:78402508-78402527 Msa1040890:CDS 25.0%
!!! TTCACTTGTTAGAATTTTCA+TGG + chr7_1:78402629-78402648 Msa1040890:intron 25.0%
!!! TCACTTGTTAGAATTTTCAT+GGG + chr7_1:78402630-78402649 Msa1040890:intron 25.0%
! TAAACAATCATACATTAGAC+AGG - chr7_1:78402667-78402686 None:intergenic 25.0%
! TTAAATCAAAGAAATTTGGG+GGG - chr7_1:78402729-78402748 None:intergenic 25.0%
! AATAATGTACTATTACTGGT+TGG + chr7_1:78403199-78403218 Msa1040890:intron 25.0%
! TAAAAGACCTAGAAAACAAA+AGG + chr7_1:78403274-78403293 Msa1040890:CDS 25.0%
!! TATGAGTTTTTGCATTTTCT+GGG - chr7_1:78403673-78403692 None:intergenic 25.0%
!! ATATGAGTTTTTGCATTTTC+TGG - chr7_1:78403674-78403693 None:intergenic 25.0%
!! GGATTTTCGAATGAATTTTT+GGG - chr7_1:78403727-78403746 None:intergenic 25.0%
!!! TTTGATTTTAAAGGGTATCA+AGG - chr7_1:78403902-78403921 None:intergenic 25.0%
!! TTTGGATGAAGATTTAAGTT+GGG + chr7_1:78404397-78404416 Msa1040890:intron 25.0%
! CGTAATTAATAAATTCATCC+AGG - chr7_1:78404449-78404468 None:intergenic 25.0%
!!! TTCCAGATGGAATATTTTTT+TGG + chr7_1:78404519-78404538 Msa1040890:intron 25.0%
!!! TCCAGATGGAATATTTTTTT+GGG + chr7_1:78404520-78404539 Msa1040890:intron 25.0%
!! TTGAATTTAAAGCTTGTCAA+TGG + chr7_1:78404786-78404805 Msa1040890:intron 25.0%
! AATTTGTACAATTCCTTTCA+AGG + chr7_1:78404870-78404889 Msa1040890:three_prime_UTR 25.0%
! GATATCAATAAAACCTTGAA+AGG - chr7_1:78404886-78404905 None:intergenic 25.0%
!! CAGTCTTATGGATATTTATA+TGG + chr7_1:78404905-78404924 Msa1040890:three_prime_UTR 25.0%
! CTTATGGATATTTATATGGA+AGG + chr7_1:78404909-78404928 Msa1040890:three_prime_UTR 25.0%
! AATGAGAATTATGAATGTTG+TGG + chr7_1:78405034-78405053 Msa1040890:three_prime_UTR 25.0%
!!! TTAGCCTATGTTTTAAAATC+AGG + chr7_1:78405098-78405117 Msa1040890:three_prime_UTR 25.0%
TTTACCCCAATTGAATTGAA+AGG + chr7_1:78398550-78398569 Msa1040890:five_prime_UTR 30.0%
!!! TTTTAGGTTTATGCACTTAC+TGG + chr7_1:78398803-78398822 Msa1040890:intron 30.0%
!! AATTGAGAAGCATCAATTGA+TGG - chr7_1:78398848-78398867 None:intergenic 30.0%
! TGTTTTCATAAGCTATCATG+GGG - chr7_1:78399138-78399157 None:intergenic 30.0%
!! GTTGTTTTCATAAGCTATCA+TGG - chr7_1:78399140-78399159 None:intergenic 30.0%
ATTACGATGATTATCCAAAC+GGG + chr7_1:78399242-78399261 Msa1040890:intron 30.0%
AAAAACATAATAACCCCGTT+TGG - chr7_1:78399259-78399278 None:intergenic 30.0%
ATGATCTTCATCTTTACCAT+TGG + chr7_1:78399325-78399344 Msa1040890:intron 30.0%
TGATCTTCATCTTTACCATT+GGG + chr7_1:78399326-78399345 Msa1040890:intron 30.0%
! TATGTATCAAGTTGTGATTG+TGG + chr7_1:78399752-78399771 Msa1040890:intron 30.0%
! ATGTATCAAGTTGTGATTGT+GGG + chr7_1:78399753-78399772 Msa1040890:intron 30.0%
CTTACAATAGAAGTCAATGA+AGG - chr7_1:78399780-78399799 None:intergenic 30.0%
GTTTAGACATGAAAAATGAG+GGG + chr7_1:78399799-78399818 Msa1040890:intron 30.0%
TAGGTAGATAAAGCAGAATA+AGG - chr7_1:78400040-78400059 None:intergenic 30.0%
!!! GTTTTGTTGTTATAGCTGAT+AGG + chr7_1:78400119-78400138 Msa1040890:CDS 30.0%
GAGTTAAATGACATGAATTG+TGG - chr7_1:78400230-78400249 None:intergenic 30.0%
ACCTTTCAATTCTGATGATA+TGG + chr7_1:78400278-78400297 Msa1040890:intron 30.0%
TCCATATCATCAGAATTGAA+AGG - chr7_1:78400282-78400301 None:intergenic 30.0%
! TTTGACTTCACCTTAATGAT+AGG - chr7_1:78400426-78400445 None:intergenic 30.0%
!! TTTCTCTTGTTGTCTTGTTT+GGG - chr7_1:78400646-78400665 None:intergenic 30.0%
!! TTTTCTCTTGTTGTCTTGTT+TGG - chr7_1:78400647-78400666 None:intergenic 30.0%
CTCCTAAATTAATGGTGTAT+TGG - chr7_1:78400855-78400874 None:intergenic 30.0%
TTCCCTAATATTCAAAGTGA+TGG - chr7_1:78400955-78400974 None:intergenic 30.0%
AAGTGACACTTAAAAAGGAA+CGG - chr7_1:78401134-78401153 None:intergenic 30.0%
GTAACAATTATTGAGTGTCT+TGG - chr7_1:78401175-78401194 None:intergenic 30.0%
CTCTCCACAATAAATAACTA+AGG + chr7_1:78401268-78401287 Msa1040890:intron 30.0%
!!! CACTTTTTAAGTGTCACTTT+TGG - chr7_1:78401369-78401388 None:intergenic 30.0%
ATAGGGAGTAATTACCAATT+TGG + chr7_1:78401397-78401416 Msa1040890:intron 30.0%
TAGGGAGTAATTACCAATTT+GGG + chr7_1:78401398-78401417 Msa1040890:intron 30.0%
CATAAAAAGTTAAGGTAGTC+GGG - chr7_1:78402217-78402236 None:intergenic 30.0%
GCATAAAAAGTTAAGGTAGT+CGG - chr7_1:78402218-78402237 None:intergenic 30.0%
TTCATGGGTATTAAGAAAGA+TGG - chr7_1:78402320-78402339 None:intergenic 30.0%
TTGAGTTTGACCATATGTTT+GGG + chr7_1:78402405-78402424 Msa1040890:intron 30.0%
TATACCAATATACCTGTTTC+TGG - chr7_1:78402542-78402561 None:intergenic 30.0%
CATTCATGTTTATAACCAGA+TGG + chr7_1:78402602-78402621 Msa1040890:intron 30.0%
!! ATTACTTGTTGTGAAATACG+TGG + chr7_1:78402748-78402767 Msa1040890:intron 30.0%
AAATATGAATTTCCGACCTT+TGG - chr7_1:78402843-78402862 None:intergenic 30.0%
! AGTTTCCCTTCTATTGTTTT+AGG + chr7_1:78402878-78402897 Msa1040890:intron 30.0%
!! ATGCATAAAACTGTTGTTTC+AGG + chr7_1:78403068-78403087 Msa1040890:intron 30.0%
! TCGGGAACTTTATTTGTATA+GGG + chr7_1:78403224-78403243 Msa1040890:intron 30.0%
TGACAAATTTAAGCTCTTAC+CGG - chr7_1:78403319-78403338 None:intergenic 30.0%
AGAAGAATCTTCAAATGACA+AGG - chr7_1:78403466-78403485 None:intergenic 30.0%
! CGGATTTTCGAATGAATTTT+TGG - chr7_1:78403728-78403747 None:intergenic 30.0%
!! TTTAAAGGGTATCAAGGTAT+GGG - chr7_1:78403896-78403915 None:intergenic 30.0%
!!! TTTTAAAGGGTATCAAGGTA+TGG - chr7_1:78403897-78403916 None:intergenic 30.0%
!! GGTGAAGGTTTGATTTTAAA+GGG - chr7_1:78403910-78403929 None:intergenic 30.0%
!! AGGTGAAGGTTTGATTTTAA+AGG - chr7_1:78403911-78403930 None:intergenic 30.0%
TCGAAATTAAAGAGAGAACA+AGG + chr7_1:78404065-78404084 Msa1040890:intron 30.0%
AAAGGGAAGAGTGAAAAATA+AGG + chr7_1:78404135-78404154 Msa1040890:intron 30.0%
AAGGGAAGAGTGAAAAATAA+GGG + chr7_1:78404136-78404155 Msa1040890:intron 30.0%
AGAAATGAAGGAAAGAGAAA+AGG + chr7_1:78404163-78404182 Msa1040890:intron 30.0%
GAAATGAAGGAAAGAGAAAA+GGG + chr7_1:78404164-78404183 Msa1040890:intron 30.0%
! TTTTGGATGAAGTTCATTGA+TGG + chr7_1:78404339-78404358 Msa1040890:intron 30.0%
TTTGGATGAAGTTCATTGAT+GGG + chr7_1:78404340-78404359 Msa1040890:intron 30.0%
TGATGTTGGATGATGTTTAT+TGG + chr7_1:78404369-78404388 Msa1040890:intron 30.0%
TTGGATGATGTTTATTGGAT+GGG + chr7_1:78404374-78404393 Msa1040890:intron 30.0%
GTTTGGATGAAGATTTAAGT+TGG + chr7_1:78404396-78404415 Msa1040890:intron 30.0%
TCCCAAAAAAATATTCCATC+TGG - chr7_1:78404524-78404543 None:intergenic 30.0%
AGCTTATTTGTACAAGAAGA+TGG + chr7_1:78404596-78404615 Msa1040890:intron 30.0%
CTTGTCAATTGAACGAAATT+TGG - chr7_1:78404717-78404736 None:intergenic 30.0%
CAAATTTCGTTCAATTGACA+AGG + chr7_1:78404715-78404734 Msa1040890:intron 30.0%
ATAACAAGGAAAACTTCGTT+CGG - chr7_1:78404821-78404840 None:intergenic 30.0%
AAAAGTTAAAAGCTTTCCCT+GGG - chr7_1:78404994-78405013 None:intergenic 30.0%
!!! GAGTCCTGATTTTAAAACAT+AGG - chr7_1:78405105-78405124 None:intergenic 30.0%
ATAGTATAACGTCGAAGCAT+CGG + chr7_1:78398475-78398494 Msa1040890:five_prime_UTR 35.0%
GAACAGTTGAGAAATTGAGA+GGG + chr7_1:78398506-78398525 Msa1040890:five_prime_UTR 35.0%
GAGAAATTGAGAGGGAAAAT+TGG + chr7_1:78398514-78398533 Msa1040890:five_prime_UTR 35.0%
TGTTCCTATGAAACCCTAAA+TGG + chr7_1:78398581-78398600 Msa1040890:exon 35.0%
!!! GGTTTTCTCTGAGATTCTTT+GGG - chr7_1:78398678-78398697 None:intergenic 35.0%
!!! AGGTTTTCTCTGAGATTCTT+TGG - chr7_1:78398679-78398698 None:intergenic 35.0%
! GAAAGAACCTTTTCATGAGT+AGG - chr7_1:78398884-78398903 None:intergenic 35.0%
TTCACAAGTGCTTACTTGAA+TGG - chr7_1:78398951-78398970 None:intergenic 35.0%
TTACGATGATTATCCAAACG+GGG + chr7_1:78399243-78399262 Msa1040890:intron 35.0%
! ACGGGGTTATTATGTTTTTC+AGG + chr7_1:78399260-78399279 Msa1040890:intron 35.0%
!!! TTTTTCAGGTTACTTGGCAA+TGG + chr7_1:78399274-78399293 Msa1040890:intron 35.0%
ATCATCTTTACGAGCAGAAT+TGG - chr7_1:78399310-78399329 None:intergenic 35.0%
!!! TTATGTGTCGCTTCTTTTTC+AGG + chr7_1:78399410-78399429 Msa1040890:intron 35.0%
! TTCTTTTGCCAAGTACAACA+AGG + chr7_1:78399470-78399489 Msa1040890:CDS 35.0%
! TTTAGCTACCTTGTTGTACT+TGG - chr7_1:78399481-78399500 None:intergenic 35.0%
! AAAGTATTTGACAGATCCTG+TGG + chr7_1:78399623-78399642 Msa1040890:intron 35.0%
AAGTATTTGACAGATCCTGT+GGG + chr7_1:78399624-78399643 Msa1040890:intron 35.0%
AATTAGACATGATTACCCAC+AGG - chr7_1:78399642-78399661 None:intergenic 35.0%
ATGCATTGAACACTTGGTAA+AGG - chr7_1:78400010-78400029 None:intergenic 35.0%
TAATTCATTTGTCTCCTCCT+TGG - chr7_1:78400071-78400090 None:intergenic 35.0%
TGCAACACATCCTATCATTA+AGG + chr7_1:78400413-78400432 Msa1040890:CDS 35.0%
TTACTATCAACACATGGCAA+TGG - chr7_1:78400542-78400561 None:intergenic 35.0%
AACAGGTTACTATCAACACA+TGG - chr7_1:78400548-78400567 None:intergenic 35.0%
CTACATTGAAAAGAGAGAAC+AGG - chr7_1:78400565-78400584 None:intergenic 35.0%
! CTGTTCTCTCTTTTCAATGT+AGG + chr7_1:78400563-78400582 Msa1040890:intron 35.0%
ACAAGAGAAAAGAGATGAAG+AGG + chr7_1:78400656-78400675 Msa1040890:CDS 35.0%
ACTTCATACATTTCTGCCAT+CGG + chr7_1:78400706-78400725 Msa1040890:intron 35.0%
TTATTATGAGGGTAAACCGA+TGG - chr7_1:78400725-78400744 None:intergenic 35.0%
CCAGACGTCATTTATTATGA+GGG - chr7_1:78400736-78400755 None:intergenic 35.0%
ACCAGACGTCATTTATTATG+AGG - chr7_1:78400737-78400756 None:intergenic 35.0%
CAAAAAGAATAGCCGAGTTA+CGG + chr7_1:78400794-78400813 Msa1040890:CDS 35.0%
GGAGTTGTTATCATGATTCA+AGG + chr7_1:78400871-78400890 Msa1040890:intron 35.0%
AGGGAGTAATTACCAATTTG+GGG + chr7_1:78401399-78401418 Msa1040890:intron 35.0%
! CAAATTTTGTTGCCCCAAAT+TGG - chr7_1:78401414-78401433 None:intergenic 35.0%
! ATTTGGGGCAACAAAATTTG+TGG + chr7_1:78401414-78401433 Msa1040890:intron 35.0%
!! GTTCTGAAATTGTAAGTGTC+TGG + chr7_1:78401697-78401716 Msa1040890:intron 35.0%
ATTGTAAGTGTCTGGCAATT+TGG + chr7_1:78401705-78401724 Msa1040890:intron 35.0%
TTGTAAGTGTCTGGCAATTT+GGG + chr7_1:78401706-78401725 Msa1040890:intron 35.0%
GACTGTCGTTAGACAATTTA+GGG - chr7_1:78401762-78401781 None:intergenic 35.0%
TGACTGTCGTTAGACAATTT+AGG - chr7_1:78401763-78401782 None:intergenic 35.0%
ATCATGTTAAGCAGAACACT+AGG + chr7_1:78401826-78401845 Msa1040890:intron 35.0%
! AAAACTTCGTTTTGTAGCAC+TGG + chr7_1:78401930-78401949 Msa1040890:intron 35.0%
TTCAGCTTCGTGTATATTTG+AGG + chr7_1:78402092-78402111 Msa1040890:intron 35.0%
GCAAGCTGCATAAAAAGTTA+AGG - chr7_1:78402225-78402244 None:intergenic 35.0%
GTTGAGTTTGACCATATGTT+TGG + chr7_1:78402404-78402423 Msa1040890:intron 35.0%
ATCTCCAGAAACAGGTATAT+TGG + chr7_1:78402535-78402554 Msa1040890:intron 35.0%
TAACAAGTGAAATCACCATC+TGG - chr7_1:78402620-78402639 None:intergenic 35.0%
GAATCAGCAACATTCTATAC+TGG + chr7_1:78402689-78402708 Msa1040890:intron 35.0%
ACGAGCCTAAAACAATAGAA+GGG - chr7_1:78402886-78402905 None:intergenic 35.0%
!! ATTCCCGATTCGTTGAATTT+TGG + chr7_1:78402961-78402980 Msa1040890:CDS 35.0%
ACCTCCAAAATTCAACGAAT+CGG - chr7_1:78402968-78402987 None:intergenic 35.0%
! CTCGGGAACTTTATTTGTAT+AGG + chr7_1:78403223-78403242 Msa1040890:intron 35.0%
! CGGGAACTTTATTTGTATAG+GGG + chr7_1:78403225-78403244 Msa1040890:intron 35.0%
! ACTTTATTTGTATAGGGGCA+TGG + chr7_1:78403230-78403249 Msa1040890:intron 35.0%
AAATTTGTCACAAACGACAC+TGG + chr7_1:78403329-78403348 Msa1040890:intron 35.0%
TAAACCAAAACTCGCTCAAA+TGG - chr7_1:78403411-78403430 None:intergenic 35.0%
GAATCTTCAAATGACAAGGT+TGG - chr7_1:78403462-78403481 None:intergenic 35.0%
!! TTTGCATTTTCTGGGTTGAA+GGG - chr7_1:78403665-78403684 None:intergenic 35.0%
!! TTTTGCATTTTCTGGGTTGA+AGG - chr7_1:78403666-78403685 None:intergenic 35.0%
!!! ATTTTGTTTTTGTACGAGGG+TGG - chr7_1:78403822-78403841 None:intergenic 35.0%
AATATGGTGATCAAGAAGGA+AGG - chr7_1:78403931-78403950 None:intergenic 35.0%
GAAGAATATGGTGATCAAGA+AGG - chr7_1:78403935-78403954 None:intergenic 35.0%
AGTGGTTCAGTTGAAGAATA+TGG - chr7_1:78403947-78403966 None:intergenic 35.0%
AGATTTGATCAATACACGAG+TGG - chr7_1:78403965-78403984 None:intergenic 35.0%
GGTAAGGAAAAAGGAAAGAA+GGG + chr7_1:78404098-78404117 Msa1040890:intron 35.0%
AAAAGGAAAGAAGGGAAACA+AGG + chr7_1:78404106-78404125 Msa1040890:intron 35.0%
AGGGAAGAGTGAAAAATAAG+GGG + chr7_1:78404137-78404156 Msa1040890:intron 35.0%
AATAAGGGGAAGAGAAATGA+AGG + chr7_1:78404151-78404170 Msa1040890:intron 35.0%
!! ATAGATGGTGTTATCGATGT+TGG + chr7_1:78404253-78404272 Msa1040890:intron 35.0%
! ACCAATAGAGTGAGAGTTTT+TGG + chr7_1:78404322-78404341 Msa1040890:intron 35.0%
TCCAAAAACTCTCACTCTAT+TGG - chr7_1:78404326-78404345 None:intergenic 35.0%
GTTGGATGATGTTTATTGGA+TGG + chr7_1:78404373-78404392 Msa1040890:intron 35.0%
! TGATGTTTATTGGATGGGTT+TGG + chr7_1:78404379-78404398 Msa1040890:intron 35.0%
TTCGATAGAAGAATTCCAGA+TGG + chr7_1:78404506-78404525 Msa1040890:intron 35.0%
ACTGTGCAAAATTGATGAGT+TGG - chr7_1:78404563-78404582 None:intergenic 35.0%
CTTGTACAAATAAGCTGACA+TGG - chr7_1:78404592-78404611 None:intergenic 35.0%
CTATAAAGTTAAAGCACGTG+GGG - chr7_1:78404756-78404775 None:intergenic 35.0%
CCTATAAAGTTAAAGCACGT+GGG - chr7_1:78404757-78404776 None:intergenic 35.0%
TCCTATAAAGTTAAAGCACG+TGG - chr7_1:78404758-78404777 None:intergenic 35.0%
!! AGTTTTCCTTGTTATCTGTC+AGG + chr7_1:78404826-78404845 Msa1040890:intron 35.0%
! AATTCATGTTTTCGTTCCCA+GGG + chr7_1:78404975-78404994 Msa1040890:three_prime_UTR 35.0%
CAAAAGTTAAAAGCTTTCCC+TGG - chr7_1:78404995-78405014 None:intergenic 35.0%
CAAAACCTTCAAGAGTTTGA+TGG - chr7_1:78405067-78405086 None:intergenic 35.0%
ATCAGGACTCAAAATCGAAT+TGG + chr7_1:78405115-78405134 Msa1040890:three_prime_UTR 35.0%
CGAACAGTTGAGAAATTGAG+AGG + chr7_1:78398505-78398524 Msa1040890:five_prime_UTR 40.0%
ATTGAGAGGGAAAATTGGAG+CGG + chr7_1:78398519-78398538 Msa1040890:five_prime_UTR 40.0%
ATATCCTTCGCGTCCATTTA+GGG - chr7_1:78398597-78398616 None:intergenic 40.0%
AATATCCTTCGCGTCCATTT+AGG - chr7_1:78398598-78398617 None:intergenic 40.0%
!! TTTCTCTGAGATTCTTTGGG+AGG - chr7_1:78398675-78398694 None:intergenic 40.0%
GAATCTCAGAGAAAACCTGA+TGG + chr7_1:78398681-78398700 Msa1040890:CDS 40.0%
TAGGTTTATGCACTTACTGG+TGG + chr7_1:78398806-78398825 Msa1040890:intron 40.0%
! TCAATTGATGGCATAAGAGG+TGG - chr7_1:78398836-78398855 None:intergenic 40.0%
! GCATCAATTGATGGCATAAG+AGG - chr7_1:78398839-78398858 None:intergenic 40.0%
AAAGCCTCCTACTCATGAAA+AGG + chr7_1:78398874-78398893 Msa1040890:intron 40.0%
! AGAACCTTTTCATGAGTAGG+AGG - chr7_1:78398881-78398900 None:intergenic 40.0%
TTACGAGCAGAATTGGTGAA+AGG - chr7_1:78399303-78399322 None:intergenic 40.0%
!! TTTCAGGTTCGAGTAGTCAA+TGG + chr7_1:78399426-78399445 Msa1040890:intron 40.0%
GCAAAAGAATAGTCTCCAGT+AGG - chr7_1:78399459-78399478 None:intergenic 40.0%
CATCATCAAATACACAGACG+AGG + chr7_1:78399593-78399612 Msa1040890:intron 40.0%
AATGGACCTGGTTATTTGCA+AGG + chr7_1:78399846-78399865 Msa1040890:intron 40.0%
CTGCTTTATCTACCTAGATG+TGG + chr7_1:78400044-78400063 Msa1040890:intron 40.0%
CACAAGAAATGGAGCGAAAA+CGG + chr7_1:78400601-78400620 Msa1040890:CDS 40.0%
ACAAGAAATGGAGCGAAAAC+GGG + chr7_1:78400602-78400621 Msa1040890:CDS 40.0%
CCCTCATAATAAATGACGTC+TGG + chr7_1:78400733-78400752 Msa1040890:intron 40.0%
GAAAATGTGCACAGCATACT+AGG - chr7_1:78400983-78401002 None:intergenic 40.0%
! TGTGCACATTTTCGTTTGCA+TGG + chr7_1:78400990-78401009 Msa1040890:intron 40.0%
! GTGCACATTTTCGTTTGCAT+GGG + chr7_1:78400991-78401010 Msa1040890:intron 40.0%
TGACACTTAAAAAGGAACGG+AGG - chr7_1:78401131-78401150 None:intergenic 40.0%
GGTTACTGAACAGTCTCAAT+TGG + chr7_1:78401507-78401526 Msa1040890:intron 40.0%
AAGGAGATACAGTTTCACCA+GGG - chr7_1:78401576-78401595 None:intergenic 40.0%
GAATGTGCAACTTCCACAAA+TGG + chr7_1:78401597-78401616 Msa1040890:CDS 40.0%
!! GTAGAAGCATTATCTGCAGA+AGG - chr7_1:78401628-78401647 None:intergenic 40.0%
GAGCAAACATTGCAAGATCT+CGG + chr7_1:78402184-78402203 Msa1040890:CDS 40.0%
AGCAAACATTGCAAGATCTC+GGG + chr7_1:78402185-78402204 Msa1040890:CDS 40.0%
GCATCATGAACCCAAACATA+TGG - chr7_1:78402418-78402437 None:intergenic 40.0%
ATGATGCATTCTGTGATTCC+AGG + chr7_1:78402431-78402450 Msa1040890:intron 40.0%
! TCTGCACAAACAGCTTTTGT+TGG - chr7_1:78402477-78402496 None:intergenic 40.0%
ATCACGGAAAGATGAACCTT+CGG - chr7_1:78402793-78402812 None:intergenic 40.0%
CACGAGCCTAAAACAATAGA+AGG - chr7_1:78402887-78402906 None:intergenic 40.0%
!!! CTTCTATTGTTTTAGGCTCG+TGG + chr7_1:78402885-78402904 Msa1040890:intron 40.0%
!!! ATTGTTTTAGGCTCGTGGTT+TGG + chr7_1:78402890-78402909 Msa1040890:intron 40.0%
CTACTGACACATTTGTTTCG+TGG + chr7_1:78402916-78402935 Msa1040890:intron 40.0%
TGACACATTTGTTTCGTGGT+GGG + chr7_1:78402920-78402939 Msa1040890:intron 40.0%
CCTCCAAAATTCAACGAATC+GGG - chr7_1:78402967-78402986 None:intergenic 40.0%
!! AAACTGTTGTTTCAGGCGAA+AGG + chr7_1:78403075-78403094 Msa1040890:intron 40.0%
!! AACTGTTGTTTCAGGCGAAA+GGG + chr7_1:78403076-78403095 Msa1040890:intron 40.0%
CAAAAAGGACCAAAAACGCA+AGG + chr7_1:78403103-78403122 Msa1040890:CDS 40.0%
!! GTACTATTACTGGTTGGTCT+CGG + chr7_1:78403205-78403224 Msa1040890:intron 40.0%
!! TACTATTACTGGTTGGTCTC+GGG + chr7_1:78403206-78403225 Msa1040890:intron 40.0%
ACCTAGAAAACAAAAGGCCT+CGG + chr7_1:78403280-78403299 Msa1040890:CDS 40.0%
CAAATTTAAGCTCTTACCGG+AGG - chr7_1:78403316-78403335 None:intergenic 40.0%
TGTTTGCAGTCATGTCATGA+AGG - chr7_1:78403497-78403516 None:intergenic 40.0%
TCATGACATGACTGCAAACA+TGG + chr7_1:78403497-78403516 Msa1040890:intron 40.0%
! TAAGGTGTTAGAGGAGATGA+AGG - chr7_1:78403623-78403642 None:intergenic 40.0%
! TTTTGTACGAGGGTGGAAAT+GGG - chr7_1:78403815-78403834 None:intergenic 40.0%
! TTTTTGTACGAGGGTGGAAA+TGG - chr7_1:78403816-78403835 None:intergenic 40.0%
!! TGGTGAATGGTGATGGATTT+GGG - chr7_1:78403861-78403880 None:intergenic 40.0%
AGAGAACAAGGAGAGAAAGA+GGG + chr7_1:78404077-78404096 Msa1040890:intron 40.0%
GAGAAAGAGGGTAAGGAAAA+AGG + chr7_1:78404089-78404108 Msa1040890:intron 40.0%
GGGTAAGGAAAAAGGAAAGA+AGG + chr7_1:78404097-78404116 Msa1040890:intron 40.0%
AGGGAAACAAGGAAGGAAAA+AGG + chr7_1:78404117-78404136 Msa1040890:intron 40.0%
GGGAAACAAGGAAGGAAAAA+GGG + chr7_1:78404118-78404137 Msa1040890:intron 40.0%
GAGGGAGATAAAGATGTTTG+TGG + chr7_1:78404212-78404231 Msa1040890:intron 40.0%
GGAGATAAAGATGTTTGTGG+TGG + chr7_1:78404215-78404234 Msa1040890:intron 40.0%
!! AATTGGTCTTGGTGGAAAAG+AGG + chr7_1:78404289-78404308 Msa1040890:intron 40.0%
!! TTGATGGGTTCTGTTGATGT+TGG + chr7_1:78404355-78404374 Msa1040890:intron 40.0%
GATGAAGATCAAGATGAACC+TGG + chr7_1:78404428-78404447 Msa1040890:intron 40.0%
! CCCACGTGCTTTAACTTTAT+AGG + chr7_1:78404754-78404773 Msa1040890:intron 40.0%
! CAATTCATGTTTTCGTTCCC+AGG + chr7_1:78404974-78404993 Msa1040890:three_prime_UTR 40.0%
! GCGTCCATTTAGGGTTTCAT+AGG - chr7_1:78398588-78398607 None:intergenic 45.0%
ATGGACGCGAAGGATATTCT+TGG + chr7_1:78398600-78398619 Msa1040890:CDS 45.0%
GCATATTGTGACTGACCCAA+TGG - chr7_1:78399344-78399363 None:intergenic 45.0%
GTCAATGGTGTTCTACCTAC+TGG + chr7_1:78399441-78399460 Msa1040890:CDS 45.0%
AGAGGTCCTTGCAAATAACC+AGG - chr7_1:78399855-78399874 None:intergenic 45.0%
ATCTACCTAGATGTGGACCA+AGG + chr7_1:78400051-78400070 Msa1040890:intron 45.0%
CTGATAGGTTCCCATCATCT+CGG + chr7_1:78400134-78400153 Msa1040890:CDS 45.0%
TCGGACTGTAGAGGAGTTAA+AGG + chr7_1:78400153-78400172 Msa1040890:CDS 45.0%
CAACACATGGCAATGGCTTA+AGG - chr7_1:78400535-78400554 None:intergenic 45.0%
!! CTTGTTGTCTTGTTTGGGAG+AGG - chr7_1:78400641-78400660 None:intergenic 45.0%
AAGAATAGCCGAGTTACGGA+TGG + chr7_1:78400798-78400817 Msa1040890:CDS 45.0%
CTTAGAAGCCATCCGTAACT+CGG - chr7_1:78400809-78400828 None:intergenic 45.0%
! CACATTTTCGTTTGCATGGG+AGG + chr7_1:78400994-78401013 Msa1040890:intron 45.0%
ATCTGTACTTGCACATGCCT+GGG + chr7_1:78401461-78401480 Msa1040890:intron 45.0%
TGATGCAGAAGTTGCAGAGA+GGG + chr7_1:78401546-78401565 Msa1040890:CDS 45.0%
GAAGGAGATACAGTTTCACC+AGG - chr7_1:78401577-78401596 None:intergenic 45.0%
TGTGGAAGTTGCACATTCGA+AGG - chr7_1:78401595-78401614 None:intergenic 45.0%
! TACTCTAGCTTCTCTTCGCA+TGG + chr7_1:78401645-78401664 Msa1040890:intron 45.0%
CCTCTAACAGAGCTACTTGA+CGG - chr7_1:78401797-78401816 None:intergenic 45.0%
! ATCACTAGTCTCTAACCCGA+AGG + chr7_1:78401874-78401893 Msa1040890:intron 45.0%
ACCCGAAGGAAATTTGTGCT+AGG + chr7_1:78401888-78401907 Msa1040890:intron 45.0%
CCCTAGCACAAATTTCCTTC+GGG - chr7_1:78401892-78401911 None:intergenic 45.0%
CCCGAAGGAAATTTGTGCTA+GGG + chr7_1:78401889-78401908 Msa1040890:intron 45.0%
GCCCTAGCACAAATTTCCTT+CGG - chr7_1:78401893-78401912 None:intergenic 45.0%
GACATATGCACTCGAGCAAA+TGG + chr7_1:78402114-78402133 Msa1040890:CDS 45.0%
CAAGCTTCAAACTCAACTGC+TGG + chr7_1:78402139-78402158 Msa1040890:CDS 45.0%
CAAACTCAACTGCTGGAGTT+CGG + chr7_1:78402146-78402165 Msa1040890:CDS 45.0%
CTGGAGTTCGGACTATCAAA+CGG + chr7_1:78402158-78402177 Msa1040890:CDS 45.0%
TGGAGTTCGGACTATCAAAC+GGG + chr7_1:78402159-78402178 Msa1040890:CDS 45.0%
GCAAACATTGCAAGATCTCG+GGG + chr7_1:78402186-78402205 Msa1040890:CDS 45.0%
! ACAGCTTTTGTTGGAACCCT+CGG - chr7_1:78402468-78402487 None:intergenic 45.0%
ATGGCTGAATCTCCAGAAAC+AGG + chr7_1:78402527-78402546 Msa1040890:CDS 45.0%
CAAAGAAATTTGGGGGGTGA+GGG - chr7_1:78402723-78402742 None:intergenic 45.0%
TCAAAGAAATTTGGGGGGTG+AGG - chr7_1:78402724-78402743 None:intergenic 45.0%
! CTTGTTGTGAAATACGTGGC+AGG + chr7_1:78402752-78402771 Msa1040890:intron 45.0%
GTGGCAGGTGCAATATAAAG+AGG + chr7_1:78402767-78402786 Msa1040890:intron 45.0%
GTGCAATATAAAGAGGCCGA+AGG + chr7_1:78402774-78402793 Msa1040890:CDS 45.0%
GAAGGTTCATCTTTCCGTGA+TGG + chr7_1:78402792-78402811 Msa1040890:CDS 45.0%
!! TCTTTCCGTGATGGATCCTA+CGG + chr7_1:78402801-78402820 Msa1040890:CDS 45.0%
TTTCACCGTAGGATCCATCA+CGG - chr7_1:78402809-78402828 None:intergenic 45.0%
CTGACACATTTGTTTCGTGG+TGG + chr7_1:78402919-78402938 Msa1040890:intron 45.0%
! TTTGTTTCGTGGTGGGAATC+AGG + chr7_1:78402927-78402946 Msa1040890:intron 45.0%
!! CCCGATTCGTTGAATTTTGG+AGG + chr7_1:78402964-78402983 Msa1040890:CDS 45.0%
! TGTGGTGTACCTTGCGTTTT+TGG - chr7_1:78403115-78403134 None:intergenic 45.0%
! CTTTTATGAGCTGCTGTAGG+TGG - chr7_1:78403260-78403279 None:intergenic 45.0%
! GGTCTTTTATGAGCTGCTGT+AGG - chr7_1:78403263-78403282 None:intergenic 45.0%
!!! TCCGAGGCCTTTTGTTTTCT+AGG - chr7_1:78403284-78403303 None:intergenic 45.0%
CCTCGGATCTTTAATTCCTC+CGG + chr7_1:78403297-78403316 Msa1040890:exon 45.0%
CAAAACTCGCTCAAATGGCA+GGG - chr7_1:78403406-78403425 None:intergenic 45.0%
! TGAAGGAGGTAAGGTGTTAG+AGG - chr7_1:78403632-78403651 None:intergenic 45.0%
!! CATTTTCTGGGTTGAAGGGT+TGG - chr7_1:78403661-78403680 None:intergenic 45.0%
AATGGGAAGTGGAAGGGTTT+GGG - chr7_1:78403798-78403817 None:intergenic 45.0%
AAATGGGAAGTGGAAGGGTT+TGG - chr7_1:78403799-78403818 None:intergenic 45.0%
!! GGTGAATGGTGATGGATTTG+GGG - chr7_1:78403860-78403879 None:intergenic 45.0%
!! GTGGTGAATGGTGATGGATT+TGG - chr7_1:78403862-78403881 None:intergenic 45.0%
!! AAGGGTATCAAGGTATGGGT+GGG - chr7_1:78403892-78403911 None:intergenic 45.0%
!! AAAGGGTATCAAGGTATGGG+TGG - chr7_1:78403893-78403912 None:intergenic 45.0%
GTGATCAAGAAGGAAGGTGA+AGG - chr7_1:78403925-78403944 None:intergenic 45.0%
GAGAGAACAAGGAGAGAAAG+AGG + chr7_1:78404076-78404095 Msa1040890:intron 45.0%
ACAAGGAGAGAAAGAGGGTA+AGG + chr7_1:78404082-78404101 Msa1040890:intron 45.0%
GGAAAGAAGGGAAACAAGGA+AGG + chr7_1:78404110-78404129 Msa1040890:intron 45.0%
AGAAAAGGGAGTAGAGAGAG+CGG + chr7_1:78404178-78404197 Msa1040890:intron 45.0%
! AAGATGTTTGTGGTGGTGCA+TGG + chr7_1:78404222-78404241 Msa1040890:intron 45.0%
TGCATGGTGGTACAGATAGA+TGG + chr7_1:78404238-78404257 Msa1040890:intron 45.0%
!! GATGGTGTTATCGATGTTGG+TGG + chr7_1:78404256-78404275 Msa1040890:intron 45.0%
ATTGCGCCTGACAGATAACA+AGG - chr7_1:78404835-78404854 None:intergenic 45.0%
AGCAGCCATCAAACTCTTGA+AGG + chr7_1:78405059-78405078 Msa1040890:three_prime_UTR 45.0%
!! AAAAAAAAAAAAAAATACAA+GGG - chr7_1:78403436-78403455 None:intergenic 5.0%
!! TAAAAAAAAAAAAAAATACA+AGG - chr7_1:78403437-78403456 None:intergenic 5.0%
!!! TTTTGTTTTTTTTTAATTTA+CGG - chr7_1:78403748-78403767 None:intergenic 5.0%
!! GTATAACGTCGAAGCATCGG+AGG + chr7_1:78398478-78398497 Msa1040890:five_prime_UTR 50.0%
GAAACCCTAAATGGACGCGA+AGG + chr7_1:78398590-78398609 Msa1040890:exon 50.0%
TGGGGTGCAGTGTACAAAAG+AGG - chr7_1:78399873-78399892 None:intergenic 50.0%
TACCTAGATGTGGACCAAGG+AGG + chr7_1:78400054-78400073 Msa1040890:intron 50.0%
CCTCTACAGTCCGAGATGAT+GGG - chr7_1:78400147-78400166 None:intergenic 50.0%
TCCTCTACAGTCCGAGATGA+TGG - chr7_1:78400148-78400167 None:intergenic 50.0%
GTCCCTGTCATGTAGTGTTG+CGG + chr7_1:78400352-78400371 Msa1040890:intron 50.0%
TCCCTGTCATGTAGTGTTGC+GGG + chr7_1:78400353-78400372 Msa1040890:intron 50.0%
! TGCGGGCTATATTACTTGCC+AGG + chr7_1:78400370-78400389 Msa1040890:CDS 50.0%
! GCGGGCTATATTACTTGCCA+GGG + chr7_1:78400371-78400390 Msa1040890:CDS 50.0%
AGGATGTGTTGCAATGTCCC+CGG - chr7_1:78400406-78400425 None:intergenic 50.0%
ACATGGCAATGGCTTAAGGC+AGG - chr7_1:78400531-78400550 None:intergenic 50.0%
! TCTTGTTTGGGAGAGGACCA+TGG - chr7_1:78400634-78400653 None:intergenic 50.0%
CGAGTTACGGATGGCTTCTA+AGG + chr7_1:78400807-78400826 Msa1040890:CDS 50.0%
GATCTGTACTTGCACATGCC+TGG + chr7_1:78401460-78401479 Msa1040890:intron 50.0%
CTGATGCAGAAGTTGCAGAG+AGG + chr7_1:78401545-78401564 Msa1040890:CDS 50.0%
! GCAGAAGGCACAACCATTTG+TGG - chr7_1:78401613-78401632 None:intergenic 50.0%
CTAACAGAGCTACTTGACGG+AGG - chr7_1:78401794-78401813 None:intergenic 50.0%
! CCGTCAAGTAGCTCTGTTAG+AGG + chr7_1:78401794-78401813 Msa1040890:intron 50.0%
! AGTAGCTCTGTTAGAGGTGC+TGG + chr7_1:78401800-78401819 Msa1040890:intron 50.0%
TGAAACACCAGGCACACCAA+AGG + chr7_1:78402824-78402843 Msa1040890:CDS 50.0%
! GTTGTTTCAGGCGAAAGGGT+TGG + chr7_1:78403080-78403099 Msa1040890:intron 50.0%
! AGGCGAAAGGGTTGGCAAAA+AGG + chr7_1:78403088-78403107 Msa1040890:intron 50.0%
CCGGAGGAATTAAAGATCCG+AGG - chr7_1:78403300-78403319 None:intergenic 50.0%
CCAAAACTCGCTCAAATGGC+AGG - chr7_1:78403407-78403426 None:intergenic 50.0%
!! CCTGCCATTTGAGCGAGTTT+TGG + chr7_1:78403404-78403423 Msa1040890:intron 50.0%
TGGAGCAGATGAAGGAGGTA+AGG - chr7_1:78403641-78403660 None:intergenic 50.0%
TGAAGGGTTGGAGCAGATGA+AGG - chr7_1:78403649-78403668 None:intergenic 50.0%
ATGGGAAGTGGAAGGGTTTG+GGG - chr7_1:78403797-78403816 None:intergenic 50.0%
GGTGGAAATGGGAAGTGGAA+GGG - chr7_1:78403804-78403823 None:intergenic 50.0%
AGGAAGGTGGTGAATGGTGA+TGG - chr7_1:78403868-78403887 None:intergenic 50.0%
GTATCAAGGTATGGGTGGGA+AGG - chr7_1:78403888-78403907 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGAGA+TGG - chr7_1:78404025-78404044 None:intergenic 50.0%
! ATGTTTGTGGTGGTGCATGG+TGG + chr7_1:78404225-78404244 Msa1040890:intron 50.0%
! GGTGTTATCGATGTTGGTGG+TGG + chr7_1:78404259-78404278 Msa1040890:intron 50.0%
!! GTTATCGATGTTGGTGGTGG+TGG + chr7_1:78404262-78404281 Msa1040890:intron 50.0%
!! TTGGTGGTGGTGGTGGAAAT+TGG + chr7_1:78404272-78404291 Msa1040890:intron 50.0%
!! GTGGTGGTGGAAATTGGTCT+TGG + chr7_1:78404278-78404297 Msa1040890:intron 50.0%
!! GTGGTGGAAATTGGTCTTGG+TGG + chr7_1:78404281-78404300 Msa1040890:intron 50.0%
GTTATCTGTCAGGCGCAATG+TGG + chr7_1:78404836-78404855 Msa1040890:intron 50.0%
GAGAGGGAAAATTGGAGCGG+AGG + chr7_1:78398522-78398541 Msa1040890:five_prime_UTR 55.0%
ACCTGATGGCATTTCACGCG+AGG + chr7_1:78398695-78398714 Msa1040890:CDS 55.0%
ACCTCGCGTGAAATGCCATC+AGG - chr7_1:78398699-78398718 None:intergenic 55.0%
CTCCTCCTTGGTCCACATCT+AGG - chr7_1:78400059-78400078 None:intergenic 55.0%
CCCATCATCTCGGACTGTAG+AGG + chr7_1:78400144-78400163 Msa1040890:CDS 55.0%
GCCCGCAACACTACATGACA+GGG - chr7_1:78400357-78400376 None:intergenic 55.0%
AGCCCGCAACACTACATGAC+AGG - chr7_1:78400358-78400377 None:intergenic 55.0%
GGATCCTACGGTGAAACACC+AGG + chr7_1:78402813-78402832 Msa1040890:CDS 55.0%
TGTGCCTGGTGTTTCACCGT+AGG - chr7_1:78402820-78402839 None:intergenic 55.0%
ACACCAGGCACACCAAAGGT+CGG + chr7_1:78402828-78402847 Msa1040890:intron 55.0%
! TTTCCGACCTTTGGTGTGCC+TGG - chr7_1:78402834-78402853 None:intergenic 55.0%
AGGGTTGGAGCAGATGAAGG+AGG - chr7_1:78403646-78403665 None:intergenic 55.0%
! AAGTGGAAGGGTTTGGGGCT+GGG - chr7_1:78403792-78403811 None:intergenic 55.0%
GGGTGGAAATGGGAAGTGGA+AGG - chr7_1:78403805-78403824 None:intergenic 55.0%
ACGAGGGTGGAAATGGGAAG+TGG - chr7_1:78403809-78403828 None:intergenic 55.0%
GTGGGAAGGAAGGTGGTGAA+TGG - chr7_1:78403874-78403893 None:intergenic 55.0%
CAAGGTATGGGTGGGAAGGA+AGG - chr7_1:78403884-78403903 None:intergenic 55.0%
AGAGAGAGCGGAGAGAGAAG+AGG + chr7_1:78404190-78404209 Msa1040890:intron 55.0%
AGAGCGGAGAGAGAAGAGGA+GGG + chr7_1:78404194-78404213 Msa1040890:intron 55.0%
!! ATCGATGTTGGTGGTGGTGG+TGG + chr7_1:78404265-78404284 Msa1040890:intron 55.0%
CTGTCAGGCGCAATGTGGAA+AGG + chr7_1:78404841-78404860 Msa1040890:intron 55.0%
CTTGCCAGGGCTGCATCTTC+CGG + chr7_1:78400384-78400403 Msa1040890:CDS 60.0%
TTGCCAGGGCTGCATCTTCC+GGG + chr7_1:78400385-78400404 Msa1040890:CDS 60.0%
! GCGAAAACGGGCACTGTCCA+TGG + chr7_1:78400614-78400633 Msa1040890:CDS 60.0%
! AGTGGAAGGGTTTGGGGCTG+GGG - chr7_1:78403791-78403810 None:intergenic 60.0%
! GAAGTGGAAGGGTTTGGGGC+TGG - chr7_1:78403793-78403812 None:intergenic 60.0%
GGTATGGGTGGGAAGGAAGG+TGG - chr7_1:78403881-78403900 None:intergenic 60.0%
GAGAGCGGAGAGAGAAGAGG+AGG + chr7_1:78404193-78404212 Msa1040890:intron 60.0%
TGCCAGGGCTGCATCTTCCG+GGG + chr7_1:78400386-78400405 Msa1040890:CDS 65.0%
GTTGCAGAGAGGGCTGTCCC+TGG + chr7_1:78401556-78401575 Msa1040890:CDS 65.0%
GTCCCCGGAAGATGCAGCCC+TGG - chr7_1:78400391-78400410 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 78398463 78405141 78398463 ID=Msa1040890;Name=Msa1040890
chr7_1 mRNA 78398463 78405141 78398463 ID=Msa1040890-mRNA-1;Parent=Msa1040890;Name=Msa1040890-mRNA-1;_AED=0.26;_eAED=0.26;_QI=137|0.76|0.92|1|0.92|0.85|14|314|348
chr7_1 exon 78398463 78398716 78398463 ID=Msa1040890-mRNA-1:exon:20953;Parent=Msa1040890-mRNA-1
chr7_1 exon 78399432 78399491 78399432 ID=Msa1040890-mRNA-1:exon:20954;Parent=Msa1040890-mRNA-1
chr7_1 exon 78400061 78400190 78400061 ID=Msa1040890-mRNA-1:exon:20955;Parent=Msa1040890-mRNA-1
chr7_1 exon 78400367 78400434 78400367 ID=Msa1040890-mRNA-1:exon:20956;Parent=Msa1040890-mRNA-1
chr7_1 exon 78400585 78400677 78400585 ID=Msa1040890-mRNA-1:exon:20957;Parent=Msa1040890-mRNA-1
chr7_1 exon 78400781 78400828 78400781 ID=Msa1040890-mRNA-1:exon:20958;Parent=Msa1040890-mRNA-1
chr7_1 exon 78401508 78401621 78401508 ID=Msa1040890-mRNA-1:exon:20959;Parent=Msa1040890-mRNA-1
chr7_1 exon 78402097 78402207 78402097 ID=Msa1040890-mRNA-1:exon:20960;Parent=Msa1040890-mRNA-1
chr7_1 exon 78402453 78402548 78402453 ID=Msa1040890-mRNA-1:exon:20961;Parent=Msa1040890-mRNA-1
chr7_1 exon 78402774 78402845 78402774 ID=Msa1040890-mRNA-1:exon:20962;Parent=Msa1040890-mRNA-1
chr7_1 exon 78402949 78402985 78402949 ID=Msa1040890-mRNA-1:exon:20963;Parent=Msa1040890-mRNA-1
chr7_1 exon 78403090 78403124 78403090 ID=Msa1040890-mRNA-1:exon:20964;Parent=Msa1040890-mRNA-1
chr7_1 exon 78403245 78403325 78403245 ID=Msa1040890-mRNA-1:exon:20965;Parent=Msa1040890-mRNA-1
chr7_1 exon 78404843 78405141 78404843 ID=Msa1040890-mRNA-1:exon:20966;Parent=Msa1040890-mRNA-1
chr7_1 five_prime_UTR 78398463 78398599 78398463 ID=Msa1040890-mRNA-1:five_prime_utr;Parent=Msa1040890-mRNA-1
chr7_1 CDS 78398600 78398716 78398600 ID=Msa1040890-mRNA-1:cds;Parent=Msa1040890-mRNA-1
chr7_1 CDS 78399432 78399491 78399432 ID=Msa1040890-mRNA-1:cds;Parent=Msa1040890-mRNA-1
chr7_1 CDS 78400061 78400190 78400061 ID=Msa1040890-mRNA-1:cds;Parent=Msa1040890-mRNA-1
chr7_1 CDS 78400367 78400434 78400367 ID=Msa1040890-mRNA-1:cds;Parent=Msa1040890-mRNA-1
chr7_1 CDS 78400585 78400677 78400585 ID=Msa1040890-mRNA-1:cds;Parent=Msa1040890-mRNA-1
chr7_1 CDS 78400781 78400828 78400781 ID=Msa1040890-mRNA-1:cds;Parent=Msa1040890-mRNA-1
chr7_1 CDS 78401508 78401621 78401508 ID=Msa1040890-mRNA-1:cds;Parent=Msa1040890-mRNA-1
chr7_1 CDS 78402097 78402207 78402097 ID=Msa1040890-mRNA-1:cds;Parent=Msa1040890-mRNA-1
chr7_1 CDS 78402453 78402548 78402453 ID=Msa1040890-mRNA-1:cds;Parent=Msa1040890-mRNA-1
chr7_1 CDS 78402774 78402845 78402774 ID=Msa1040890-mRNA-1:cds;Parent=Msa1040890-mRNA-1
chr7_1 CDS 78402949 78402985 78402949 ID=Msa1040890-mRNA-1:cds;Parent=Msa1040890-mRNA-1
chr7_1 CDS 78403090 78403124 78403090 ID=Msa1040890-mRNA-1:cds;Parent=Msa1040890-mRNA-1
chr7_1 CDS 78403245 78403310 78403245 ID=Msa1040890-mRNA-1:cds;Parent=Msa1040890-mRNA-1
chr7_1 three_prime_UTR 78403311 78403325 78403311 ID=Msa1040890-mRNA-1:three_prime_utr;Parent=Msa1040890-mRNA-1
chr7_1 three_prime_UTR 78404843 78405141 78404843 ID=Msa1040890-mRNA-1:three_prime_utr;Parent=Msa1040890-mRNA-1
Gene Sequence

>Msa1040890

ATGGACGCGAAGGATATTCTTGGTTTGCACAAAAACTCATTTCCATCTTCTCTTGATAATAAAAAATCTCGACCTCCCAAAGAATCTCAGAGAAAACCTGATGGCATTTCACGCGAGGTTCGAGTAGTCAATGGTGTTCTACCTACTGGAGACTATTCTTTTGCCAAGTACAACAAGATGTGGACCAAGGAGGAGACAAATGAATTATTTGATTTGTGTGAGAGGTTCGATCTCCGTTTTGTTGTTATAGCTGATAGGTTCCCATCATCTCGGACTGTAGAGGAGTTAAAGGATCGATATTATAGTGTGTTGCGGGCTATATTACTTGCCAGGGCTGCATCTTCCGGGGACATTGCAACACATCCTATCATTAAGGAACCATATAATGTTTCACAAGAAATGGAGCGAAAACGGGCACTGTCCATGGTCCTCTCCCAAACAAGACAACAAGAGAAAAGAGATGAAGAGGTTCTTATTGAAGCAAAAAGAATAGCCGAGTTACGGATGGCTTCTAAGGTTACTGAACAGTCTCAATTGGCTGTTGCTTCAAATGCTGATGCAGAAGTTGCAGAGAGGGCTGTCCCTGGTGAAACTGTATCTCCTTCGAATGTGCAACTTCCACAAATGGTTCTTCGTGTATATTTGAGGACATATGCACTCGAGCAAATGGTGCAAGCTTCAAACTCAACTGCTGGAGTTCGGACTATCAAACGGGTTGAGCAAACATTGCAAGATCTCGGGGTAAATTTGAAACCGAGGGTTCCAACAAAAGCTGTTTGTGCAGAGCATCTTGAACTAAGAAGAGAAATACTAACATGGCTGAATCTCCAGAAACAGGTGCAATATAAAGAGGCCGAAGGTTCATCTTTCCGTGATGGATCCTACGGTGAAACACCAGGCACACCAAAGGATCGTACATTTATTCCCGATTCGTTGAATTTTGGAGGCGAAAGGGTTGGCAAAAAGGACCAAAAACGCAAGGGGCATGGAGCTCCACCTACAGCAGCTCATAAAAGACCTAGAAAACAAAAGGCCTCGGATCTTTAA

Protein sequence

>Msa1040890

MDAKDILGLHKNSFPSSLDNKKSRPPKESQRKPDGISREVRVVNGVLPTGDYSFAKYNKMWTKEETNELFDLCERFDLRFVVIADRFPSSRTVEELKDRYYSVLRAILLARAASSGDIATHPIIKEPYNVSQEMERKRALSMVLSQTRQQEKRDEEVLIEAKRIAELRMASKVTEQSQLAVASNADAEVAERAVPGETVSPSNVQLPQMVLRVYLRTYALEQMVQASNSTAGVRTIKRVEQTLQDLGVNLKPRVPTKAVCAEHLELRREILTWLNLQKQVQYKEAEGSSFRDGSYGETPGTPKDRTFIPDSLNFGGERVGKKDQKRKGHGAPPTAAHKRPRKQKASDL*