Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1085860 | XP_003603490.2 | 90.291 | 309 | 8 | 1 | 1 | 287 | 1 | 309 | 0.0 | 564 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1085860 | sp|Q5JL96|ZFP34_ORYSJ | 66.316 | 285 | 71 | 3 | 22 | 285 | 22 | 302 | 1.75e-132 | 380 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1085860 | A0A396J207 | 90.291 | 309 | 8 | 1 | 1 | 287 | 1 | 309 | 0.0 | 564 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021400 | Msa1085860 | 0.804492 | 2.104720e-49 | -8.615850e-47 |
| Msa0097470 | Msa1085860 | -0.816166 | 6.361863e-52 | -8.615850e-47 |
| Msa0626920 | Msa1085860 | 0.808936 | 2.423774e-50 | -8.615850e-47 |
| Msa0665610 | Msa1085860 | 0.810113 | 1.354806e-50 | -8.615850e-47 |
| Msa0692710 | Msa1085860 | -0.819639 | 1.044757e-52 | -8.615850e-47 |
| Msa0752770 | Msa1085860 | -0.813473 | 2.514413e-51 | -8.615850e-47 |
| Msa0814350 | Msa1085860 | 0.802636 | 5.107151e-49 | -8.615850e-47 |
| Msa0830830 | Msa1085860 | -0.803569 | 3.274978e-49 | -8.615850e-47 |
| Msa0833150 | Msa1085860 | -0.811147 | 8.096793e-51 | -8.615850e-47 |
| Msa0195850 | Msa1085860 | -0.806758 | 7.041919e-50 | -8.615850e-47 |
| Msa0223050 | Msa1085860 | 0.804550 | 2.047159e-49 | -8.615850e-47 |
| Msa0235000 | Msa1085860 | 0.826446 | 2.701409e-54 | -8.615850e-47 |
| Msa0236640 | Msa1085860 | -0.801615 | 8.280829e-49 | -8.615850e-47 |
| Msa0237690 | Msa1085860 | -0.807860 | 4.112580e-50 | -8.615850e-47 |
| Msa0383230 | Msa1085860 | 0.923951 | 1.346579e-89 | -8.615850e-47 |
| Msa0427850 | Msa1085860 | 0.802176 | 6.352554e-49 | -8.615850e-47 |
| Msa0433050 | Msa1085860 | 0.978185 | 2.674447e-145 | -8.615850e-47 |
| Msa0472260 | Msa1085860 | -0.805716 | 1.167014e-49 | -8.615850e-47 |
| Msa0472560 | Msa1085860 | -0.814937 | 1.194694e-51 | -8.615850e-47 |
| Msa0474080 | Msa1085860 | 0.806566 | 7.728822e-50 | -8.615850e-47 |
| Msa0474290 | Msa1085860 | -0.809935 | 1.479851e-50 | -8.615850e-47 |
| Msa0482360 | Msa1085860 | 0.812283 | 4.583220e-51 | -8.615850e-47 |
| Msa1031620 | Msa1085860 | -0.804472 | 2.125057e-49 | -8.615850e-47 |
| Msa1034690 | Msa1085860 | 0.834276 | 3.292070e-56 | -8.615850e-47 |
| Msa1056790 | Msa1085860 | -0.806619 | 7.532662e-50 | -8.615850e-47 |
| Msa1067000 | Msa1085860 | 0.810331 | 1.215712e-50 | -8.615850e-47 |
| Msa1074490 | Msa1085860 | 0.837310 | 5.606531e-57 | -8.615850e-47 |
| Msa1074550 | Msa1085860 | 0.835542 | 1.579623e-56 | -8.615850e-47 |
| Msa1085860 | Msa1115000 | 0.829794 | 4.215983e-55 | -8.615850e-47 |
| Msa1085860 | Msa1131070 | 0.802953 | 4.392917e-49 | -8.615850e-47 |
| Msa1085860 | Msa1158540 | -0.808603 | 2.855225e-50 | -8.615850e-47 |
| Msa1085860 | Msa1161390 | -0.804696 | 1.908613e-49 | -8.615850e-47 |
| Msa1085860 | Msa1162050 | 0.868805 | 4.969328e-66 | -8.615850e-47 |
| Msa1085860 | Msa1187160 | 0.817304 | 3.533986e-52 | -8.615850e-47 |
| Msa1085860 | Msa1218310 | -0.804619 | 1.980162e-49 | -8.615850e-47 |
| Msa1085860 | Msa1218350 | -0.804700 | 1.904924e-49 | -8.615850e-47 |
| Msa1085860 | Msa1225280 | -0.808000 | 3.839821e-50 | -8.615850e-47 |
| Msa1085860 | Msa1258600 | 0.806974 | 6.337171e-50 | -8.615850e-47 |
| Msa1085860 | Msa1267080 | 0.804013 | 2.647794e-49 | -8.615850e-47 |
| Msa1085860 | Msa1267390 | -0.801649 | 8.148903e-49 | -8.615850e-47 |
| Msa1085860 | Msa1345390 | 0.801158 | 1.027541e-48 | -8.615850e-47 |
| Msa1085860 | Msa1357090 | -0.817502 | 3.189637e-52 | -8.615850e-47 |
| Msa1085860 | Msa1375640 | 0.820064 | 8.355861e-53 | -8.615850e-47 |
| Msa1085860 | Msa1382150 | -0.807541 | 4.806251e-50 | -8.615850e-47 |
| Msa1085860 | Msa1400940 | 0.807342 | 5.296835e-50 | -8.615850e-47 |
| Msa1085860 | Msa1411820 | -0.803360 | 3.618616e-49 | -8.615850e-47 |
| Msa1085860 | Msa1412270 | -0.807786 | 4.264021e-50 | -8.615850e-47 |
| Msa1085860 | Msa1429190 | 0.814110 | 1.819940e-51 | -8.615850e-47 |
| Msa1085860 | Msa1463890 | -0.810069 | 1.384553e-50 | -8.615850e-47 |
| Msa0268070 | Msa1085860 | 0.800821 | 1.204172e-48 | -8.615850e-47 |
| Msa0273400 | Msa1085860 | 0.821502 | 3.901633e-53 | -8.615850e-47 |
| Msa0275260 | Msa1085860 | -0.803149 | 4.000231e-49 | -8.615850e-47 |
| Msa0309490 | Msa1085860 | -0.808458 | 3.066390e-50 | -8.615850e-47 |
| Msa0518720 | Msa1085860 | -0.811952 | 5.410893e-51 | -8.615850e-47 |
| Msa0524670 | Msa1085860 | 0.975594 | 3.061213e-140 | -8.615850e-47 |
| Msa0567190 | Msa1085860 | -0.802754 | 4.828559e-49 | -8.615850e-47 |
| Msa0573940 | Msa1085860 | -0.811336 | 7.367669e-51 | -8.615850e-47 |
| Msa0576480 | Msa1085860 | -0.801633 | 8.212162e-49 | -8.615850e-47 |
| Msa0576550 | Msa1085860 | -0.807976 | 3.885685e-50 | -8.615850e-47 |
| Msa0937160 | Msa1085860 | -0.810311 | 1.227705e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1085860 | MtrunA17_Chr3g0138621 | 90.291 | 309 | 8 | 1 | 1 | 287 | 1 | 309 | 0.0 | 564 |
| Msa1085860 | MtrunA17_Chr1g0148421 | 73.463 | 309 | 53 | 2 | 1 | 287 | 1 | 302 | 3.19e-164 | 457 |
| Msa1085860 | MtrunA17_Chr1g0169881 | 66.990 | 309 | 72 | 3 | 1 | 287 | 1 | 301 | 2.76e-148 | 417 |
| Msa1085860 | MtrunA17_Chr4g0028121 | 67.206 | 247 | 59 | 1 | 62 | 286 | 58 | 304 | 4.42e-123 | 354 |
| Msa1085860 | MtrunA17_Chr7g0264931 | 64.961 | 254 | 67 | 1 | 56 | 287 | 16 | 269 | 3.05e-121 | 348 |
| Msa1085860 | MtrunA17_Chr2g0286331 | 54.800 | 250 | 90 | 2 | 58 | 285 | 12 | 260 | 5.89e-95 | 281 |
| Msa1085860 | MtrunA17_Chr4g0059881 | 34.859 | 284 | 135 | 9 | 29 | 285 | 1011 | 1271 | 4.19e-44 | 160 |
| Msa1085860 | MtrunA17_Chr8g0391161 | 32.323 | 297 | 150 | 9 | 27 | 286 | 953 | 1235 | 2.65e-43 | 157 |
| Msa1085860 | MtrunA17_Chr6g0484171 | 37.008 | 254 | 119 | 9 | 62 | 287 | 986 | 1226 | 6.64e-42 | 154 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1085860 | AT5G25560.1 | 63.987 | 311 | 85 | 4 | 1 | 287 | 1 | 308 | 1.46e-135 | 385 |
| Msa1085860 | AT5G25560.5 | 63.987 | 311 | 85 | 4 | 1 | 287 | 1 | 308 | 1.46e-135 | 385 |
| Msa1085860 | AT5G25560.6 | 63.987 | 311 | 85 | 4 | 1 | 287 | 1 | 308 | 1.46e-135 | 385 |
| Msa1085860 | AT5G25560.2 | 63.987 | 311 | 85 | 4 | 1 | 287 | 1 | 308 | 1.46e-135 | 385 |
| Msa1085860 | AT5G25560.3 | 61.994 | 321 | 85 | 5 | 1 | 287 | 1 | 318 | 2.01e-132 | 378 |
| Msa1085860 | AT5G25560.4 | 62.701 | 311 | 84 | 5 | 1 | 287 | 1 | 303 | 5.90e-130 | 371 |
| Msa1085860 | AT5G22920.1 | 60.377 | 265 | 83 | 1 | 44 | 286 | 7 | 271 | 2.26e-117 | 339 |
| Msa1085860 | AT5G22920.2 | 65.238 | 210 | 73 | 0 | 44 | 253 | 7 | 216 | 2.69e-104 | 304 |
| Msa1085860 | AT5G18650.1 | 54.297 | 256 | 94 | 2 | 52 | 285 | 6 | 260 | 1.50e-96 | 285 |
| Msa1085860 | AT3G62970.1 | 51.587 | 252 | 100 | 2 | 55 | 285 | 26 | 276 | 7.96e-93 | 276 |
| Msa1085860 | AT3G62970.2 | 55.721 | 201 | 88 | 1 | 55 | 255 | 26 | 225 | 9.73e-83 | 249 |
| Msa1085860 | AT3G62970.3 | 55.721 | 201 | 88 | 1 | 55 | 255 | 26 | 225 | 2.18e-82 | 248 |
| Msa1085860 | AT1G74770.1 | 35.915 | 284 | 131 | 9 | 29 | 285 | 1000 | 1259 | 2.07e-47 | 170 |
| Msa1085860 | AT1G18910.1 | 37.011 | 281 | 126 | 9 | 30 | 283 | 996 | 1252 | 1.13e-45 | 165 |
| Msa1085860 | AT3G18290.1 | 36.220 | 254 | 120 | 8 | 62 | 287 | 1004 | 1243 | 1.79e-43 | 159 |
| Msa1085860 | AT1G74770.2 | 38.496 | 226 | 110 | 8 | 29 | 249 | 1000 | 1201 | 1.59e-40 | 150 |
Find 108 sgRNAs with CRISPR-Local
Find 338 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTTTGGATAGTTGTATTT+TGG | 0.158519 | 7_2:-86868259 | Msa1085860:three_prime_UTR |
| GAGAGAGGATATATGGAGTA+TGG | 0.207183 | 7_2:-86872908 | Msa1085860:CDS |
| CTTAATGGCAATTGAAAATT+AGG | 0.207437 | 7_2:-86868378 | Msa1085860:three_prime_UTR |
| ATGAACACATAGTCCCTTAA+TGG | 0.231913 | 7_2:-86868393 | Msa1085860:three_prime_UTR |
| TTCATTGTGCTTGCTGTTGC+AGG | 0.244907 | 7_2:-86868515 | Msa1085860:three_prime_UTR |
| ACCGGAGAAGGTGTCGTATT+AGG | 0.258966 | 7_2:-86872790 | Msa1085860:CDS |
| TTTCATTCAGACAGCTCTTA+TGG | 0.265918 | 7_2:+86869412 | None:intergenic |
| GCAGTAAATGCTTGCGTGTC+AGG | 0.294400 | 7_2:+86874233 | None:intergenic |
| TGTGCTTGCTGTTGCAGGTT+GGG | 0.316056 | 7_2:-86868510 | Msa1085860:three_prime_UTR |
| CCGGAGAAGGTGTCGTATTA+GGG | 0.346547 | 7_2:-86872789 | Msa1085860:CDS |
| TCTGTAGATGTCAACATTAC+CGG | 0.349957 | 7_2:-86872808 | Msa1085860:intron |
| TTTATGAAAGTGGTGGGGTG+GGG | 0.353360 | 7_2:-86874145 | Msa1085860:five_prime_UTR |
| CTTGCGAGAGAGAGGATATA+TGG | 0.362778 | 7_2:-86872915 | Msa1085860:CDS |
| TTTACGTTGTAATGTTTGTA+TGG | 0.366566 | 7_2:-86868452 | Msa1085860:three_prime_UTR |
| TCTCATATCCTCCAACTCTA+AGG | 0.368205 | 7_2:-86873998 | Msa1085860:intron |
| ATGCATGTGCTCTTCATTTG+AGG | 0.389882 | 7_2:+86872982 | None:intergenic |
| CAAAAGCACTGTTTCAAAAC+AGG | 0.403494 | 7_2:+86874204 | None:intergenic |
| AGTGCAAGCTATCTAGAAAC+AGG | 0.408470 | 7_2:+86873119 | None:intergenic |
| GCAGTGGTTGTGGAATTTGC+AGG | 0.412763 | 7_2:-86871835 | Msa1085860:intron |
| GTGCTTGCTGTTGCAGGTTG+GGG | 0.422852 | 7_2:-86868509 | Msa1085860:three_prime_UTR |
| CTCCATTCTTATGAAGATAG+TGG | 0.424980 | 7_2:-86868615 | Msa1085860:three_prime_UTR |
| GACAGCTCTTATGGATTGTA+TGG | 0.427608 | 7_2:+86869421 | None:intergenic |
| TTCAATGCAACCGATGCAAA+TGG | 0.428670 | 7_2:+86868588 | None:intergenic |
| GTTTATGAAAGTGGTGGGGT+GGG | 0.434200 | 7_2:-86874146 | Msa1085860:five_prime_UTR |
| TGCATGTGCTCTTCATTTGA+GGG | 0.437426 | 7_2:+86872983 | None:intergenic |
| TGCAGGTTGGGGCAACTAGT+TGG | 0.440988 | 7_2:-86868498 | Msa1085860:three_prime_UTR |
| CAGTACCATTGCAGTGGTTG+TGG | 0.446831 | 7_2:-86871845 | Msa1085860:CDS |
| TCCCCGCCATCAGGTCAAAC+AGG | 0.452846 | 7_2:-86872338 | Msa1085860:intron |
| TTATGAAAGTGGTGGGGTGG+GGG | 0.458323 | 7_2:-86874144 | Msa1085860:five_prime_UTR |
| TTTGTGCGACAAGATGAAAC+TGG | 0.460355 | 7_2:+86868733 | None:intergenic |
| AGCCACTATCTTCATAAGAA+TGG | 0.471867 | 7_2:+86868613 | None:intergenic |
| AGAATGGCCGGTCTTGTGTT+CGG | 0.477658 | 7_2:+86874025 | None:intergenic |
| ATTGTTACCTCAAAACAAAC+AGG | 0.479044 | 7_2:+86869580 | None:intergenic |
| TTCAATTTGAGTGCAATGAC+AGG | 0.480009 | 7_2:-86873039 | Msa1085860:CDS |
| TTTGGCATGGGAAAATCTGC+TGG | 0.481627 | 7_2:-86868241 | Msa1085860:three_prime_UTR |
| CGTAAACAATAGAGCACAAG+GGG | 0.484768 | 7_2:+86868469 | None:intergenic |
| TATAACACAAGACAAATAAG+AGG | 0.485710 | 7_2:-86868690 | Msa1085860:CDS |
| AAACTGACTTTGAGCACAAA+GGG | 0.486545 | 7_2:+86869273 | None:intergenic |
| AGAGAGGATATATGGAGTAT+GGG | 0.487300 | 7_2:-86872907 | Msa1085860:intron |
| TGGGTCAGGGGAGCTCTAAT+CGG | 0.489772 | 7_2:-86874052 | Msa1085860:five_prime_UTR |
| GGATCAAAGAGGAATGAGAA+TGG | 0.489861 | 7_2:+86874100 | None:intergenic |
| TACCTGTTTGACCTGATGGC+GGG | 0.493489 | 7_2:+86872336 | None:intergenic |
| TTACTAGTAGTTTATGAAAG+TGG | 0.500648 | 7_2:-86874155 | Msa1085860:five_prime_UTR |
| TATCAATTGCGGTGTGTGCA+TGG | 0.500787 | 7_2:-86871921 | Msa1085860:CDS |
| TAGTAGTTTATGAAAGTGGT+GGG | 0.507761 | 7_2:-86874151 | Msa1085860:five_prime_UTR |
| CCCTAATACGACACCTTCTC+CGG | 0.508236 | 7_2:+86872789 | None:intergenic |
| AACATACCTGTTTGACCTGA+TGG | 0.508780 | 7_2:+86872332 | None:intergenic |
| GTCAGTTTGTGATATGTCAA+AGG | 0.511690 | 7_2:-86869258 | Msa1085860:intron |
| ACACGACATTCCCCGCCATC+AGG | 0.513051 | 7_2:-86872347 | Msa1085860:CDS |
| TTGTGCTTGCTGTTGCAGGT+TGG | 0.513938 | 7_2:-86868511 | Msa1085860:three_prime_UTR |
| GTTTATACATGCAGGTCACT+AGG | 0.515281 | 7_2:-86873149 | Msa1085860:intron |
| CTGAAAATAGTGAGCATCAT+GGG | 0.515352 | 7_2:-86873091 | Msa1085860:exon |
| AAATAAGAATAAAAGCACTT+TGG | 0.517518 | 7_2:-86868274 | Msa1085860:three_prime_UTR |
| AACGGTCACCCTTGTGTGGA+AGG | 0.518944 | 7_2:-86869622 | Msa1085860:CDS |
| TGCATTGCTCCTTCCACACA+AGG | 0.524587 | 7_2:+86869613 | None:intergenic |
| GAGGATATGAGAGGAGAGAA+TGG | 0.527699 | 7_2:+86874009 | None:intergenic |
| AGTTTATGAAAGTGGTGGGG+TGG | 0.528004 | 7_2:-86874147 | Msa1085860:five_prime_UTR |
| GATGTCAACATTACCGGAGA+AGG | 0.534230 | 7_2:-86872802 | Msa1085860:CDS |
| GATCAAAGAGGAATGAGAAT+GGG | 0.534348 | 7_2:+86874101 | None:intergenic |
| ATCGGTTGCATTGAATATGA+TGG | 0.538810 | 7_2:-86868580 | Msa1085860:three_prime_UTR |
| TCAATGCAACCGATGCAAAT+GGG | 0.542694 | 7_2:+86868589 | None:intergenic |
| CTAGTAGTTTATGAAAGTGG+TGG | 0.544149 | 7_2:-86874152 | Msa1085860:five_prime_UTR |
| AGAGCTGTCTGAATGAAATG+AGG | 0.554066 | 7_2:-86869407 | Msa1085860:CDS |
| CCCAGCAGACAAAACAAAGA+AGG | 0.556816 | 7_2:+86874071 | None:intergenic |
| TCAAATATCTCATTGCAACA+AGG | 0.556883 | 7_2:+86872764 | None:intergenic |
| TTACGTTGTAATGTTTGTAT+GGG | 0.557569 | 7_2:-86868451 | Msa1085860:three_prime_UTR |
| ATCAATGACTTGCGAGAGAG+AGG | 0.557776 | 7_2:-86872923 | Msa1085860:CDS |
| ACCTGTTTGACCTGATGGCG+GGG | 0.562153 | 7_2:+86872337 | None:intergenic |
| GCACTCAAATTGAAGAGGCT+CGG | 0.562219 | 7_2:+86873048 | None:intergenic |
| CAGTAAATGCTTGCGTGTCA+GGG | 0.562298 | 7_2:+86874234 | None:intergenic |
| TGGATCCTTTGCAATGATTG+CGG | 0.563350 | 7_2:-86868771 | Msa1085860:CDS |
| TCTGAAAATAGTGAGCATCA+TGG | 0.568624 | 7_2:-86873092 | Msa1085860:exon |
| ACAAAACAAAGAAGGATGGA+TGG | 0.570330 | 7_2:+86874079 | None:intergenic |
| AGTGAGCATCATGGGAGAAG+TGG | 0.570618 | 7_2:-86873083 | Msa1085860:exon |
| ATCAATTGCGGTGTGTGCAT+GGG | 0.579084 | 7_2:-86871920 | Msa1085860:CDS |
| ATATGAGAGGAGAGAATGGC+CGG | 0.583600 | 7_2:+86874013 | None:intergenic |
| ACAACGAACCTTAGAGTTGG+AGG | 0.583681 | 7_2:+86873990 | None:intergenic |
| GCAGACAAAACAAAGAAGGA+TGG | 0.587703 | 7_2:+86874075 | None:intergenic |
| CGGAGCTCCGAACACAAGAC+CGG | 0.589759 | 7_2:-86874032 | Msa1085860:five_prime_UTR |
| TCATTGCACTCAAATTGAAG+AGG | 0.591774 | 7_2:+86873043 | None:intergenic |
| TGGAAATGCATGAGTTGAGC+GGG | 0.593340 | 7_2:-86868560 | Msa1085860:three_prime_UTR |
| CAAATATCTCATTGCAACAA+GGG | 0.593446 | 7_2:+86872765 | None:intergenic |
| GAGCTGTCTGAATGAAATGA+GGG | 0.595369 | 7_2:-86869406 | Msa1085860:CDS |
| GGAACAACGAACCTTAGAGT+TGG | 0.597252 | 7_2:+86873987 | None:intergenic |
| AAATTCCACAACCACTGCAA+TGG | 0.598547 | 7_2:+86871840 | None:intergenic |
| CAAACTGACTTTGAGCACAA+AGG | 0.599345 | 7_2:+86869272 | None:intergenic |
| TTCTTCCACTGCTACAAGTG+TGG | 0.601466 | 7_2:-86869774 | Msa1085860:intron |
| TCAAATGAAGAGCACATGCA+TGG | 0.607616 | 7_2:-86872980 | Msa1085860:CDS |
| AACGTAAACAATAGAGCACA+AGG | 0.608424 | 7_2:+86868467 | None:intergenic |
| ACTTACCACACTTGTAGCAG+TGG | 0.608628 | 7_2:+86869769 | None:intergenic |
| AAATATCTCATTGCAACAAG+GGG | 0.613018 | 7_2:+86872766 | None:intergenic |
| ACTCTGTGAGACTGAACAAG+AGG | 0.613028 | 7_2:-86872196 | Msa1085860:intron |
| TAGTGGCTACCCATTTGCAT+CGG | 0.618494 | 7_2:-86868598 | Msa1085860:three_prime_UTR |
| TTGTCGCCATTGTCACAATG+AGG | 0.627282 | 7_2:-86872741 | Msa1085860:CDS |
| AGTAGTTTATGAAAGTGGTG+GGG | 0.630647 | 7_2:-86874150 | Msa1085860:five_prime_UTR |
| ATACCTGTTTGACCTGATGG+CGG | 0.637436 | 7_2:+86872335 | None:intergenic |
| CAGCAGAACTGTATCAATTG+CGG | 0.643368 | 7_2:-86871932 | Msa1085860:CDS |
| ATTAGGCTGTAATAAACGTG+TGG | 0.647002 | 7_2:-86868361 | Msa1085860:three_prime_UTR |
| TTAGAGTTGGAGGATATGAG+AGG | 0.650901 | 7_2:+86874000 | None:intergenic |
| CAATGACAGGAATCTTATCA+CGG | 0.652971 | 7_2:-86873026 | Msa1085860:CDS |
| AAGCAGCAGTACCATTGCAG+TGG | 0.661184 | 7_2:-86871851 | Msa1085860:CDS |
| GAAGGATGGATGGATCAAAG+AGG | 0.670375 | 7_2:+86874089 | None:intergenic |
| TGTATGGCCGCAATGCAACA+CGG | 0.679908 | 7_2:+86869437 | None:intergenic |
| ACGTAAACAATAGAGCACAA+GGG | 0.680213 | 7_2:+86868468 | None:intergenic |
| ATGGAAATGCATGAGTTGAG+CGG | 0.688899 | 7_2:-86868561 | Msa1085860:three_prime_UTR |
| GCATTGCTCCTTCCACACAA+GGG | 0.704197 | 7_2:+86869614 | None:intergenic |
| GATGTCTCCGTGTTGCATTG+CGG | 0.707696 | 7_2:-86869444 | Msa1085860:CDS |
| GTAAACAATAGAGCACAAGG+GGG | 0.858578 | 7_2:+86868470 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTTTTATATATTTAA+AGG | - | chr7_2:86869118-86869137 | Msa1085860:intron | 0.0% |
| !!! | TTTTAATTTCTTTTATAACT+TGG | - | chr7_2:86868538-86868557 | Msa1085860:three_prime_UTR | 10.0% |
| !! | ATATAAAATAAAGTCAAATT+GGG | + | chr7_2:86873481-86873500 | None:intergenic | 10.0% |
| !! | AATATAAAATAAAGTCAAAT+TGG | + | chr7_2:86873482-86873501 | None:intergenic | 10.0% |
| !!! | ATTTGACTTTATTTTATATT+TGG | - | chr7_2:86873482-86873501 | Msa1085860:intron | 10.0% |
| !!! | ATTTTTTAATATACAGTTCA+AGG | - | chr7_2:86868850-86868869 | Msa1085860:intron | 15.0% |
| !! | TTTGTTTAAGTAATTAAGTA+AGG | + | chr7_2:86868951-86868970 | None:intergenic | 15.0% |
| !!! | AAATCATTAATTTTTTACGA+TGG | + | chr7_2:86869618-86869637 | None:intergenic | 15.0% |
| !! | TTCTAAATGATATAATGAAA+TGG | + | chr7_2:86870442-86870461 | None:intergenic | 15.0% |
| !! | TATTTAAGAATTGAGATCAA+TGG | + | chr7_2:86868676-86868695 | None:intergenic | 20.0% |
| !! | AAAATAATCGATAATTGATG+TGG | + | chr7_2:86868835-86868854 | None:intergenic | 20.0% |
| !!! | TTATCAAATGCTTTTTCTTT+AGG | + | chr7_2:86869165-86869184 | None:intergenic | 20.0% |
| !!! | TGTTATTGCTAAATTGTTTT+CGG | - | chr7_2:86869260-86869279 | Msa1085860:CDS | 20.0% |
| !! | TACAATATAATCCTCATTTA+TGG | + | chr7_2:86869822-86869841 | None:intergenic | 20.0% |
| !!! | ATATTTTCTTTACTATCTCT+TGG | - | chr7_2:86870282-86870301 | Msa1085860:intron | 20.0% |
| !! | TGTTATGAAATTACTTATGA+CGG | - | chr7_2:86870325-86870344 | Msa1085860:intron | 20.0% |
| !! | TCTCAAAATTAATAACTGTT+TGG | + | chr7_2:86870375-86870394 | None:intergenic | 20.0% |
| !!! | TTCATTATATCATTTAGAAC+TGG | - | chr7_2:86870443-86870462 | Msa1085860:intron | 20.0% |
| !!! | ATATGTTTTAAAAACAGAAC+TGG | - | chr7_2:86872638-86872657 | Msa1085860:intron | 20.0% |
| !!! | TTTGTATTTGATTTTGTATC+AGG | - | chr7_2:86873144-86873163 | Msa1085860:intron | 20.0% |
| !!! | ATTTTATTAAGATATGGTTC+AGG | + | chr7_2:86873257-86873276 | None:intergenic | 20.0% |
| !! | TGAACCATATCTTAATAAAA+TGG | - | chr7_2:86873256-86873275 | Msa1085860:intron | 20.0% |
| !!! | CTTACCATTTTATTAAGATA+TGG | + | chr7_2:86873263-86873282 | None:intergenic | 20.0% |
| !!! | TAATTTTCAATTGCCATTAA+GGG | + | chr7_2:86874071-86874090 | None:intergenic | 20.0% |
| !!! | TAGTATTTTTCTTAAGACAT+GGG | + | chr7_2:86874139-86874158 | None:intergenic | 20.0% |
| !!! | ATAGTATTTTTCTTAAGACA+TGG | + | chr7_2:86874140-86874159 | None:intergenic | 20.0% |
| !!! | AAATAAGAATAAAAGCACTT+TGG | - | chr7_2:86874174-86874193 | Msa1085860:five_prime_UTR | 20.0% |
| ! | TTACTAGTAGTTTATGAAAG+TGG | - | chr7_2:86868293-86868312 | Msa1085860:three_prime_UTR | 25.0% |
| ! | TCAAACACAAATAACAAGTA+TGG | + | chr7_2:86868497-86868516 | None:intergenic | 25.0% |
| !! | TTATTAGTTTAAGAAACCTG+AGG | - | chr7_2:86868725-86868744 | Msa1085860:CDS | 25.0% |
| ! | AAGTAAAATAAATCTACCTC+AGG | + | chr7_2:86868744-86868763 | None:intergenic | 25.0% |
| !! | GTTATTGCTAAATTGTTTTC+GGG | - | chr7_2:86869261-86869280 | Msa1085860:CDS | 25.0% |
| ! | CTAAATATGTTTATACATGC+AGG | - | chr7_2:86869291-86869310 | Msa1085860:intron | 25.0% |
| ! | GATTGAAAAGCAAATAGTAT+GGG | + | chr7_2:86869580-86869599 | None:intergenic | 25.0% |
| ! | AGATTGAAAAGCAAATAGTA+TGG | + | chr7_2:86869581-86869600 | None:intergenic | 25.0% |
| !!! | TAATTTTTTACGATGGCAAA+GGG | + | chr7_2:86869611-86869630 | None:intergenic | 25.0% |
| !!! | TTAATTTTTTACGATGGCAA+AGG | + | chr7_2:86869612-86869631 | None:intergenic | 25.0% |
| ! | ACTTATGACTTAGAATGAAA+TGG | - | chr7_2:86869975-86869994 | Msa1085860:intron | 25.0% |
| ! | CAAAATTAATAACTGTTTGG+AGG | + | chr7_2:86870372-86870391 | None:intergenic | 25.0% |
| !!! | CAAATTGGTTAGCTTATTAT+CGG | + | chr7_2:86870645-86870664 | None:intergenic | 25.0% |
| ! | TTTAGCTAACTTAACCAAAT+TGG | + | chr7_2:86870660-86870679 | None:intergenic | 25.0% |
| ! | TCATTATGACTATTATCCTT+GGG | + | chr7_2:86870819-86870838 | None:intergenic | 25.0% |
| ! | ATCATTATGACTATTATCCT+TGG | + | chr7_2:86870820-86870839 | None:intergenic | 25.0% |
| ! | AGGATAATAGTCATAATGAT+CGG | - | chr7_2:86870820-86870839 | Msa1085860:intron | 25.0% |
| ! | CACAACTAAACTCTATATAT+AGG | + | chr7_2:86870951-86870970 | None:intergenic | 25.0% |
| ! | ATTGTGTTTCAAACTCAAAT+TGG | + | chr7_2:86871088-86871107 | None:intergenic | 25.0% |
| ! | ACTGAAGTAACTAAGTAAAA+TGG | - | chr7_2:86871129-86871148 | Msa1085860:intron | 25.0% |
| ! | CTGAAGTAACTAAGTAAAAT+GGG | - | chr7_2:86871130-86871149 | Msa1085860:intron | 25.0% |
| ! | TGAAGTAACTAAGTAAAATG+GGG | - | chr7_2:86871131-86871150 | Msa1085860:intron | 25.0% |
| !! | AAATAAGCAGCTTTTATGTT+TGG | + | chr7_2:86871318-86871337 | None:intergenic | 25.0% |
| ! | TCATTATGACTATTATCCTT+GGG | + | chr7_2:86870819-86870838 | None:intergenic | 25.0% |
| ! | ATCATTATGACTATTATCCT+TGG | + | chr7_2:86870820-86870839 | None:intergenic | 25.0% |
| ! | AGGATAATAGTCATAATGAT+CGG | - | chr7_2:86870820-86870839 | Msa1085860:intron | 25.0% |
| ! | CACAACTAAACTCTATATAT+AGG | + | chr7_2:86870951-86870970 | None:intergenic | 25.0% |
| ! | TACTCAACTTTGTTGAAAAA+CGG | - | chr7_2:86872808-86872827 | Msa1085860:intron | 25.0% |
| ! | CATAAATTCAACAAATTGAC+AGG | + | chr7_2:86872923-86872942 | None:intergenic | 25.0% |
| !!! | CTGTCAATTTGTTGAATTTA+TGG | - | chr7_2:86872921-86872940 | Msa1085860:CDS | 25.0% |
| !!! | TCAATTTGTTGAATTTATGG+AGG | - | chr7_2:86872924-86872943 | Msa1085860:CDS | 25.0% |
| ! | ACAAATCACTACAATTGAAA+TGG | + | chr7_2:86873117-86873136 | None:intergenic | 25.0% |
| ! | CAAAATCAAATACAAAGTTC+AGG | + | chr7_2:86873140-86873159 | None:intergenic | 25.0% |
| ! | TCAATACAAACAAGTCTAAA+AGG | + | chr7_2:86873290-86873309 | None:intergenic | 25.0% |
| ! | TATAGAAATAGTCTATACAC+AGG | - | chr7_2:86873506-86873525 | Msa1085860:intron | 25.0% |
| ! | ATAGAAATAGTCTATACACA+GGG | - | chr7_2:86873507-86873526 | Msa1085860:intron | 25.0% |
| ! | TATAACACAAGACAAATAAG+AGG | - | chr7_2:86873758-86873777 | Msa1085860:intron | 25.0% |
| ! | TTTACGTTGTAATGTTTGTA+TGG | - | chr7_2:86873996-86874015 | Msa1085860:intron | 25.0% |
| ! | TTACGTTGTAATGTTTGTAT+GGG | - | chr7_2:86873997-86874016 | Msa1085860:intron | 25.0% |
| !! | CTAATTTTCAATTGCCATTA+AGG | + | chr7_2:86874072-86874091 | None:intergenic | 25.0% |
| ! | CTTAATGGCAATTGAAAATT+AGG | - | chr7_2:86874070-86874089 | Msa1085860:five_prime_UTR | 25.0% |
| TAGTAGTTTATGAAAGTGGT+GGG | - | chr7_2:86868297-86868316 | Msa1085860:three_prime_UTR | 30.0% | |
| AACAAGTATGGAAGAAAGTA+AGG | + | chr7_2:86868485-86868504 | None:intergenic | 30.0% | |
| !! | ATTCTTTTGATTCATGTAGC+TGG | - | chr7_2:86868577-86868596 | Msa1085860:three_prime_UTR | 30.0% |
| TAAAACCATGAACATGAACA+TGG | + | chr7_2:86868771-86868790 | None:intergenic | 30.0% | |
| ! | ATGGATTATAGGCAATAAGT+CGG | + | chr7_2:86868809-86868828 | None:intergenic | 30.0% |
| AAATATCTCATTGCAACAAG+GGG | + | chr7_2:86869685-86869704 | None:intergenic | 30.0% | |
| CAAATATCTCATTGCAACAA+GGG | + | chr7_2:86869686-86869705 | None:intergenic | 30.0% | |
| TCAAATATCTCATTGCAACA+AGG | + | chr7_2:86869687-86869706 | None:intergenic | 30.0% | |
| CTGTTCAGATATTTCATGTA+TGG | - | chr7_2:86869778-86869797 | Msa1085860:CDS | 30.0% | |
| TTCAGATATTTCATGTATGG+TGG | - | chr7_2:86869781-86869800 | Msa1085860:CDS | 30.0% | |
| TTAAGACTCTCGAATTTCTT+GGG | - | chr7_2:86869851-86869870 | Msa1085860:intron | 30.0% | |
| CAAATTTCATAGACAACTTC+AGG | - | chr7_2:86869936-86869955 | Msa1085860:intron | 30.0% | |
| AAAATTGCAGATCTTCAATG+AGG | + | chr7_2:86870156-86870175 | None:intergenic | 30.0% | |
| !!! | CTGTTGTTATTTTTCTGATG+AGG | - | chr7_2:86870189-86870208 | Msa1085860:intron | 30.0% |
| ! | AATGAATGCTCCAATTTTTC+AGG | - | chr7_2:86870219-86870238 | Msa1085860:intron | 30.0% |
| GAACATATCACCTGAAAAAT+TGG | + | chr7_2:86870232-86870251 | None:intergenic | 30.0% | |
| CGATAATAAGCTAACCAATT+TGG | - | chr7_2:86870643-86870662 | Msa1085860:intron | 30.0% | |
| GAAAAAGTCATATCAACCTT+GGG | + | chr7_2:86870713-86870732 | None:intergenic | 30.0% | |
| AGAAAAAGTCATATCAACCT+TGG | + | chr7_2:86870714-86870733 | None:intergenic | 30.0% | |
| !!! | TCTTGTTTTTCCTTTTCTCT+TGG | - | chr7_2:86870733-86870752 | Msa1085860:intron | 30.0% |
| GAAGTAACTAAGTAAAATGG+GGG | - | chr7_2:86871132-86871151 | Msa1085860:intron | 30.0% | |
| TAAGGAAGAAAAGAAGAAGA+AGG | + | chr7_2:86871246-86871265 | None:intergenic | 30.0% | |
| !!! | AAAAGCACTTTTGCAACAAA+AGG | + | chr7_2:86871283-86871302 | None:intergenic | 30.0% |
| !!! | CTTTTGGAATAAGTTGTTTG+TGG | + | chr7_2:86871395-86871414 | None:intergenic | 30.0% |
| !!! | AAAGTGTTTTGATTTCGTTC+AGG | + | chr7_2:86871461-86871480 | None:intergenic | 30.0% |
| TCATCATGTAACTTGAGAAA+CGG | - | chr7_2:86871801-86871820 | Msa1085860:intron | 30.0% | |
| ATCTTCACCAATATCTGAAT+CGG | - | chr7_2:86872256-86872275 | Msa1085860:intron | 30.0% | |
| !!! | AGACTTTAGTGCACTTTTTT+TGG | - | chr7_2:86872587-86872606 | Msa1085860:intron | 30.0% |
| !!! | TGTTTTAAAAACAGAACTGG+AGG | - | chr7_2:86872641-86872660 | Msa1085860:intron | 30.0% |
| !!! | GTTTTAAAAACAGAACTGGA+GGG | - | chr7_2:86872642-86872661 | Msa1085860:intron | 30.0% |
| AAGAAAAACAGTTATGAAGC+AGG | + | chr7_2:86872762-86872781 | None:intergenic | 30.0% | |
| TCTTCATAACTTCTTTGCAT+AGG | - | chr7_2:86872778-86872797 | Msa1085860:CDS | 30.0% | |
| ATTGTTACCTCAAAACAAAC+AGG | + | chr7_2:86872871-86872890 | None:intergenic | 30.0% | |
| GCTTATCTCAGTTTATCTAT+TGG | + | chr7_2:86873445-86873464 | None:intergenic | 30.0% | |
| !!! | ATTAAGCTGTTTTTCCAAAC+AGG | - | chr7_2:86873547-86873566 | Msa1085860:intron | 30.0% |
| !!! | TTAAGCTGTTTTTCCAAACA+GGG | - | chr7_2:86873548-86873567 | Msa1085860:intron | 30.0% |
| AAATAATGATCAACCCTGTT+TGG | + | chr7_2:86873564-86873583 | None:intergenic | 30.0% | |
| TCATCATGTACATAGTTGTA+TGG | + | chr7_2:86873606-86873625 | None:intergenic | 30.0% | |
| ! | TTTTTCTTAAGACATGGGAA+CGG | + | chr7_2:86874134-86874153 | None:intergenic | 30.0% |
| ! | CACTTTGGATAGTTGTATTT+TGG | - | chr7_2:86874189-86874208 | Msa1085860:five_prime_UTR | 30.0% |
| !! | CAAAAGCACTGTTTCAAAAC+AGG | + | chr7_2:86868247-86868266 | None:intergenic | 35.0% |
| !!! | CTGTTTTGAAACAGTGCTTT+TGG | - | chr7_2:86868245-86868264 | Msa1085860:three_prime_UTR | 35.0% |
| !! | TTTGAAACAGTGCTTTTGGA+AGG | - | chr7_2:86868249-86868268 | Msa1085860:three_prime_UTR | 35.0% |
| CTAGTAGTTTATGAAAGTGG+TGG | - | chr7_2:86868296-86868315 | Msa1085860:three_prime_UTR | 35.0% | |
| AGTAGTTTATGAAAGTGGTG+GGG | - | chr7_2:86868298-86868317 | Msa1085860:three_prime_UTR | 35.0% | |
| GATCAAAGAGGAATGAGAAT+GGG | + | chr7_2:86868350-86868369 | None:intergenic | 35.0% | |
| ACAAAACAAAGAAGGATGGA+TGG | + | chr7_2:86868372-86868391 | None:intergenic | 35.0% | |
| TACAACCATGTTCATGTTCA+TGG | - | chr7_2:86868763-86868782 | Msa1085860:CDS | 35.0% | |
| CAATAAGTCGGTGACATATT+TGG | + | chr7_2:86868797-86868816 | None:intergenic | 35.0% | |
| ! | TGATGTGGCATATGGATTAT+AGG | + | chr7_2:86868820-86868839 | None:intergenic | 35.0% |
| TCGATAATTGATGTGGCATA+TGG | + | chr7_2:86868828-86868847 | None:intergenic | 35.0% | |
| CATTTGATAAGTAACTGTCC+AGG | - | chr7_2:86869175-86869194 | Msa1085860:intron | 35.0% | |
| AAAAATTCAAGGTCTGAACC+TGG | + | chr7_2:86869196-86869215 | None:intergenic | 35.0% | |
| ! | AGGTTCAGACCTTGAATTTT+TGG | - | chr7_2:86869195-86869214 | Msa1085860:intron | 35.0% |
| !!! | AGACCTTGAATTTTTGGAAC+AGG | - | chr7_2:86869201-86869220 | Msa1085860:intron | 35.0% |
| !!! | CTTGAATTTTTGGAACAGGT+CGG | - | chr7_2:86869205-86869224 | Msa1085860:intron | 35.0% |
| TCTGAAAATAGTGAGCATCA+TGG | - | chr7_2:86869356-86869375 | Msa1085860:intron | 35.0% | |
| CTGAAAATAGTGAGCATCAT+GGG | - | chr7_2:86869357-86869376 | Msa1085860:intron | 35.0% | |
| TCATTGCACTCAAATTGAAG+AGG | + | chr7_2:86869408-86869427 | None:intergenic | 35.0% | |
| TTCAATTTGAGTGCAATGAC+AGG | - | chr7_2:86869409-86869428 | Msa1085860:CDS | 35.0% | |
| CAATGACAGGAATCTTATCA+CGG | - | chr7_2:86869422-86869441 | Msa1085860:CDS | 35.0% | |
| ! | TCATTGATCTTTTTGTGGTC+TGG | + | chr7_2:86869513-86869532 | None:intergenic | 35.0% |
| ! | GCAAGTCATTGATCTTTTTG+TGG | + | chr7_2:86869518-86869537 | None:intergenic | 35.0% |
| AGAGAGGATATATGGAGTAT+GGG | - | chr7_2:86869541-86869560 | Msa1085860:intron | 35.0% | |
| TCTGTAGATGTCAACATTAC+CGG | - | chr7_2:86869640-86869659 | Msa1085860:CDS | 35.0% | |
| CACAGTCTAGTATTTCATGA+TGG | - | chr7_2:86869747-86869766 | Msa1085860:intron | 35.0% | |
| CTTATTGCTTGCCATAAATG+AGG | - | chr7_2:86869808-86869827 | Msa1085860:intron | 35.0% | |
| GTTAAGACTCTCGAATTTCT+TGG | - | chr7_2:86869850-86869869 | Msa1085860:intron | 35.0% | |
| !!! | TGCATGGGCAATTATTTTTG+CGG | - | chr7_2:86870543-86870562 | Msa1085860:intron | 35.0% |
| AATGTATTGTTCCTATCCCA+AGG | - | chr7_2:86870694-86870713 | Msa1085860:intron | 35.0% | |
| ! | TGTTGCTTAACCAAGAGAAA+AGG | + | chr7_2:86870746-86870765 | None:intergenic | 35.0% |
| AATAGTCATAATGATCGGCA+AGG | - | chr7_2:86870825-86870844 | Msa1085860:intron | 35.0% | |
| AGTGCATAGTTGTATTCATG+AGG | - | chr7_2:86870851-86870870 | Msa1085860:intron | 35.0% | |
| AGATAACCATAGAGACTCAT+AGG | - | chr7_2:86870875-86870894 | Msa1085860:intron | 35.0% | |
| !!! | TTTCCCATTTTGAGTTTGAG+GGG | + | chr7_2:86871060-86871079 | None:intergenic | 35.0% |
| !!! | CTTTCCCATTTTGAGTTTGA+GGG | + | chr7_2:86871061-86871080 | None:intergenic | 35.0% |
| !!! | ACTTTCCCATTTTGAGTTTG+AGG | + | chr7_2:86871062-86871081 | None:intergenic | 35.0% |
| ATGAAAAACATAGAAAGCCC+AGG | - | chr7_2:86871182-86871201 | Msa1085860:intron | 35.0% | |
| TAACGTGATTCAATAAGGCT+GGG | + | chr7_2:86871372-86871391 | None:intergenic | 35.0% | |
| ! | TGTGGTAACGTGATTCAATA+AGG | + | chr7_2:86871377-86871396 | None:intergenic | 35.0% |
| !!! | TGCAATGCAAAAAGTGCTTT+TGG | + | chr7_2:86871411-86871430 | None:intergenic | 35.0% |
| TAATCGCTTTGCTTCTGTAA+TGG | - | chr7_2:86871624-86871643 | Msa1085860:intron | 35.0% | |
| TCAATCGAACCAAAATTCGA+TGG | + | chr7_2:86872131-86872150 | None:intergenic | 35.0% | |
| !!! | TCGAATTTTGGTTCGATTGA+AGG | - | chr7_2:86872131-86872150 | Msa1085860:intron | 35.0% |
| !! | TTTTGATTCTCCGATTGTTC+CGG | + | chr7_2:86872165-86872184 | None:intergenic | 35.0% |
| TGAAGAATCAAGAATGGAAG+AGG | - | chr7_2:86872211-86872230 | Msa1085860:intron | 35.0% | |
| ACATCATCATCTTCATTCCT+AGG | - | chr7_2:86872290-86872309 | Msa1085860:intron | 35.0% | |
| CATCATCATCTTCATTCCTA+GGG | - | chr7_2:86872291-86872310 | Msa1085860:intron | 35.0% | |
| AATAGTCATAATGATCGGCA+AGG | - | chr7_2:86870825-86870844 | Msa1085860:intron | 35.0% | |
| AGTGCATAGTTGTATTCATG+AGG | - | chr7_2:86870851-86870870 | Msa1085860:intron | 35.0% | |
| AGATAACCATAGAGACTCAT+AGG | - | chr7_2:86870875-86870894 | Msa1085860:intron | 35.0% | |
| !!! | AGATTGTCCTGTTTGTTTTG+AGG | - | chr7_2:86872861-86872880 | Msa1085860:intron | 35.0% |
| CATAACTACACTACCGAAAT+TGG | - | chr7_2:86872951-86872970 | Msa1085860:CDS | 35.0% | |
| AATACTGCGATCACCAATTT+CGG | + | chr7_2:86872967-86872986 | None:intergenic | 35.0% | |
| TTTCATTCAGACAGCTCTTA+TGG | + | chr7_2:86873039-86873058 | None:intergenic | 35.0% | |
| ! | AAACTGACTTTGAGCACAAA+GGG | + | chr7_2:86873178-86873197 | None:intergenic | 35.0% |
| GTCAGTTTGTGATATGTCAA+AGG | - | chr7_2:86873190-86873209 | Msa1085860:intron | 35.0% | |
| !! | GGAAAAAATTGACTTGGAAC+TGG | - | chr7_2:86873217-86873236 | Msa1085860:intron | 35.0% |
| TTAAGATATGGTTCAGGCAT+CGG | + | chr7_2:86873251-86873270 | None:intergenic | 35.0% | |
| AAAGTCAAATTGGGTCTCTT+TGG | + | chr7_2:86873472-86873491 | None:intergenic | 35.0% | |
| ! | ATTTTGTTCATATGCCATCG+TGG | - | chr7_2:86873580-86873599 | Msa1085860:intron | 35.0% |
| ! | CAAGAGAGTGCATAAAATCT+TGG | + | chr7_2:86873650-86873669 | None:intergenic | 35.0% |
| ! | ATTTTATGCACTCTCTTGAC+AGG | - | chr7_2:86873652-86873671 | Msa1085860:intron | 35.0% |
| CTCCATTCTTATGAAGATAG+TGG | - | chr7_2:86873833-86873852 | Msa1085860:intron | 35.0% | |
| AGCCACTATCTTCATAAGAA+TGG | + | chr7_2:86873838-86873857 | None:intergenic | 35.0% | |
| ATCGGTTGCATTGAATATGA+TGG | - | chr7_2:86873868-86873887 | Msa1085860:intron | 35.0% | |
| ACGTAAACAATAGAGCACAA+GGG | + | chr7_2:86873983-86874002 | None:intergenic | 35.0% | |
| AACGTAAACAATAGAGCACA+AGG | + | chr7_2:86873984-86874003 | None:intergenic | 35.0% | |
| ATGAACACATAGTCCCTTAA+TGG | - | chr7_2:86874055-86874074 | Msa1085860:five_prime_UTR | 35.0% | |
| ATTAGGCTGTAATAAACGTG+TGG | - | chr7_2:86874087-86874106 | Msa1085860:five_prime_UTR | 35.0% | |
| ! | TTTTCTTAAGACATGGGAAC+GGG | + | chr7_2:86874133-86874152 | None:intergenic | 35.0% |
| !!! | TGGATAGTTGTATTTTGGCA+TGG | - | chr7_2:86874194-86874213 | Msa1085860:five_prime_UTR | 35.0% |
| !!! | GGATAGTTGTATTTTGGCAT+GGG | - | chr7_2:86874195-86874214 | Msa1085860:five_prime_UTR | 35.0% |
| GGATCAAAGAGGAATGAGAA+TGG | + | chr7_2:86868351-86868370 | None:intergenic | 40.0% | |
| GCAGACAAAACAAAGAAGGA+TGG | + | chr7_2:86868376-86868395 | None:intergenic | 40.0% | |
| !!! | TCCTTCTTTGTTTTGTCTGC+TGG | - | chr7_2:86868376-86868395 | Msa1085860:three_prime_UTR | 40.0% |
| !!! | CCTTCTTTGTTTTGTCTGCT+GGG | - | chr7_2:86868377-86868396 | Msa1085860:three_prime_UTR | 40.0% |
| TTAGAGTTGGAGGATATGAG+AGG | + | chr7_2:86868451-86868470 | None:intergenic | 40.0% | |
| TCTCATATCCTCCAACTCTA+AGG | - | chr7_2:86868450-86868469 | Msa1085860:three_prime_UTR | 40.0% | |
| TGTCAGACACTTTAGTAGAC+TGG | - | chr7_2:86868697-86868716 | Msa1085860:CDS | 40.0% | |
| CGACCTGTTCCAAAAATTCA+AGG | + | chr7_2:86869207-86869226 | None:intergenic | 40.0% | |
| GTTTATACATGCAGGTCACT+AGG | - | chr7_2:86869299-86869318 | Msa1085860:intron | 40.0% | |
| AGTGCAAGCTATCTAGAAAC+AGG | + | chr7_2:86869332-86869351 | None:intergenic | 40.0% | |
| TGCATGTGCTCTTCATTTGA+GGG | + | chr7_2:86869468-86869487 | None:intergenic | 40.0% | |
| ATGCATGTGCTCTTCATTTG+AGG | + | chr7_2:86869469-86869488 | None:intergenic | 40.0% | |
| ! | TCAAATGAAGAGCACATGCA+TGG | - | chr7_2:86869468-86869487 | Msa1085860:CDS | 40.0% |
| ! | TCTTTTTGTGGTCTGGTGAT+TGG | + | chr7_2:86869506-86869525 | None:intergenic | 40.0% |
| GAGAGAGGATATATGGAGTA+TGG | - | chr7_2:86869540-86869559 | Msa1085860:intron | 40.0% | |
| ! | CTTTTGCCTCATTGTGACAA+TGG | + | chr7_2:86869716-86869735 | None:intergenic | 40.0% |
| ! | CTGCAGCATCACTTTCATTT+TGG | - | chr7_2:86870021-86870040 | Msa1085860:intron | 40.0% |
| AACATACCTGTTTGACCTGA+TGG | + | chr7_2:86870119-86870138 | None:intergenic | 40.0% | |
| ATTGCAGATCTTCAATGAGG+TGG | + | chr7_2:86870153-86870172 | None:intergenic | 40.0% | |
| CAGCAGAACTGTATCAATTG+CGG | - | chr7_2:86870516-86870535 | Msa1085860:intron | 40.0% | |
| !!! | GCATGGGCAATTATTTTTGC+GGG | - | chr7_2:86870544-86870563 | Msa1085860:intron | 40.0% |
| AAATTCCACAACCACTGCAA+TGG | + | chr7_2:86870611-86870630 | None:intergenic | 40.0% | |
| AGTCATATCAACCTTGGGAT+AGG | + | chr7_2:86870708-86870727 | None:intergenic | 40.0% | |
| TTACGAATCAGAGAATCCCA+AGG | - | chr7_2:86870800-86870819 | Msa1085860:intron | 40.0% | |
| GATTCTCCTATGAGTCTCTA+TGG | + | chr7_2:86870884-86870903 | None:intergenic | 40.0% | |
| AGCAAGCTATCTAGATAGCT+TGG | + | chr7_2:86871003-86871022 | None:intergenic | 40.0% | |
| !!! | TTCCCATTTTGAGTTTGAGG+GGG | + | chr7_2:86871059-86871078 | None:intergenic | 40.0% |
| TGATTCCCATCAGAACATGT+GGG | + | chr7_2:86871208-86871227 | None:intergenic | 40.0% | |
| GTAACGTGATTCAATAAGGC+TGG | + | chr7_2:86871373-86871392 | None:intergenic | 40.0% | |
| CTGTCAGTGATGATTGAAAC+TGG | - | chr7_2:86871516-86871535 | Msa1085860:intron | 40.0% | |
| ACAACCGGAAACGAATTTGA+CGG | - | chr7_2:86871709-86871728 | Msa1085860:intron | 40.0% | |
| TTCTCCGTCAAATTCGTTTC+CGG | + | chr7_2:86871716-86871735 | None:intergenic | 40.0% | |
| CCAATCATCAATTTCGATCC+CGG | + | chr7_2:86871780-86871799 | None:intergenic | 40.0% | |
| AAACGGAAGCTGAATCTTGA+TGG | - | chr7_2:86871818-86871837 | Msa1085860:intron | 40.0% | |
| AGAAATCGCACCAATTTGGA+CGG | - | chr7_2:86872100-86872119 | Msa1085860:intron | 40.0% | |
| ! | ACGGAGAATCCATCGAATTT+TGG | - | chr7_2:86872119-86872138 | Msa1085860:intron | 40.0% |
| TCGATTGAAGGAGAAGAAAC+CGG | - | chr7_2:86872143-86872162 | Msa1085860:intron | 40.0% | |
| CGAAGCTGAAGAATCAAGAA+TGG | - | chr7_2:86872205-86872224 | Msa1085860:CDS | 40.0% | |
| ACCAATATCTGAATCGGAAG+CGG | - | chr7_2:86872262-86872281 | Msa1085860:intron | 40.0% | |
| ! | GGATTCTCTGATTCGTAACA+TGG | + | chr7_2:86870798-86870817 | None:intergenic | 40.0% |
| TTACGAATCAGAGAATCCCA+AGG | - | chr7_2:86870800-86870819 | Msa1085860:intron | 40.0% | |
| GATTCTCCTATGAGTCTCTA+TGG | + | chr7_2:86870884-86870903 | None:intergenic | 40.0% | |
| AGCAAGCTATCTAGATAGCT+TGG | + | chr7_2:86871003-86871022 | None:intergenic | 40.0% | |
| ! | GACAGCTCTTATGGATTGTA+TGG | + | chr7_2:86873030-86873049 | None:intergenic | 40.0% |
| AGAGCTGTCTGAATGAAATG+AGG | - | chr7_2:86873041-86873060 | Msa1085860:CDS | 40.0% | |
| GAGCTGTCTGAATGAAATGA+GGG | - | chr7_2:86873042-86873061 | Msa1085860:CDS | 40.0% | |
| ! | CAAACTGACTTTGAGCACAA+AGG | + | chr7_2:86873179-86873198 | None:intergenic | 40.0% |
| CAAATTGGGTCTCTTTGGAT+TGG | + | chr7_2:86873467-86873486 | None:intergenic | 40.0% | |
| TGGATCCTTTGCAATGATTG+CGG | - | chr7_2:86873677-86873696 | Msa1085860:intron | 40.0% | |
| ! | TTTTGCCGCAATCATTGCAA+AGG | + | chr7_2:86873685-86873704 | None:intergenic | 40.0% |
| TTTGTGCGACAAGATGAAAC+TGG | + | chr7_2:86873718-86873737 | None:intergenic | 40.0% | |
| TCAATGCAACCGATGCAAAT+GGG | + | chr7_2:86873862-86873881 | None:intergenic | 40.0% | |
| TTCAATGCAACCGATGCAAA+TGG | + | chr7_2:86873863-86873882 | None:intergenic | 40.0% | |
| ! | ATGGAAATGCATGAGTTGAG+CGG | - | chr7_2:86873887-86873906 | Msa1085860:intron | 40.0% |
| GTAAACAATAGAGCACAAGG+GGG | + | chr7_2:86873981-86874000 | None:intergenic | 40.0% | |
| CGTAAACAATAGAGCACAAG+GGG | + | chr7_2:86873982-86874001 | None:intergenic | 40.0% | |
| ! | AGTTTATGAAAGTGGTGGGG+TGG | - | chr7_2:86868301-86868320 | Msa1085860:three_prime_UTR | 45.0% |
| ! | GTTTATGAAAGTGGTGGGGT+GGG | - | chr7_2:86868302-86868321 | Msa1085860:three_prime_UTR | 45.0% |
| ! | TTTATGAAAGTGGTGGGGTG+GGG | - | chr7_2:86868303-86868322 | Msa1085860:three_prime_UTR | 45.0% |
| GAAGGATGGATGGATCAAAG+AGG | + | chr7_2:86868362-86868381 | None:intergenic | 45.0% | |
| CCCAGCAGACAAAACAAAGA+AGG | + | chr7_2:86868380-86868399 | None:intergenic | 45.0% | |
| !!! | TTTGTTTTGTCTGCTGGGTC+AGG | - | chr7_2:86868382-86868401 | Msa1085860:three_prime_UTR | 45.0% |
| !! | TTGTTTTGTCTGCTGGGTCA+GGG | - | chr7_2:86868383-86868402 | Msa1085860:three_prime_UTR | 45.0% |
| ATATGAGAGGAGAGAATGGC+CGG | + | chr7_2:86868438-86868457 | None:intergenic | 45.0% | |
| GAGGATATGAGAGGAGAGAA+TGG | + | chr7_2:86868442-86868461 | None:intergenic | 45.0% | |
| ACAACGAACCTTAGAGTTGG+AGG | + | chr7_2:86868461-86868480 | None:intergenic | 45.0% | |
| GGAACAACGAACCTTAGAGT+TGG | + | chr7_2:86868464-86868483 | None:intergenic | 45.0% | |
| GCACTCAAATTGAAGAGGCT+CGG | + | chr7_2:86869403-86869422 | None:intergenic | 45.0% | |
| ! | ATCAATGACTTGCGAGAGAG+AGG | - | chr7_2:86869525-86869544 | Msa1085860:intron | 45.0% |
| CTTGCGAGAGAGAGGATATA+TGG | - | chr7_2:86869533-86869552 | Msa1085860:intron | 45.0% | |
| GATGTCAACATTACCGGAGA+AGG | - | chr7_2:86869646-86869665 | Msa1085860:CDS | 45.0% | |
| TTGTCGCCATTGTCACAATG+AGG | - | chr7_2:86869707-86869726 | Msa1085860:intron | 45.0% | |
| ATACCTGTTTGACCTGATGG+CGG | + | chr7_2:86870116-86870135 | None:intergenic | 45.0% | |
| ACTCTGTGAGACTGAACAAG+AGG | - | chr7_2:86870252-86870271 | Msa1085860:intron | 45.0% | |
| CCTGGAAGCAGAAGATATCA+AGG | + | chr7_2:86870494-86870513 | None:intergenic | 45.0% | |
| CCTTGATATCTTCTGCTTCC+AGG | - | chr7_2:86870491-86870510 | Msa1085860:intron | 45.0% | |
| TGATACAGTTCTGCTGAACC+TGG | + | chr7_2:86870512-86870531 | None:intergenic | 45.0% | |
| TATCAATTGCGGTGTGTGCA+TGG | - | chr7_2:86870527-86870546 | Msa1085860:intron | 45.0% | |
| ATCAATTGCGGTGTGTGCAT+GGG | - | chr7_2:86870528-86870547 | Msa1085860:intron | 45.0% | |
| AGTCCCCCTCAAACTCAAAA+TGG | - | chr7_2:86871053-86871072 | Msa1085860:intron | 45.0% | |
| GTCCCCCTCAAACTCAAAAT+GGG | - | chr7_2:86871054-86871073 | Msa1085860:intron | 45.0% | |
| CTGATTCCCATCAGAACATG+TGG | + | chr7_2:86871209-86871228 | None:intergenic | 45.0% | |
| ! | AAGGCTGGTTGCAAAGCTTA+AGG | + | chr7_2:86871264-86871283 | None:intergenic | 45.0% |
| ! | GCACTTTTGCAACAAAAGGC+TGG | + | chr7_2:86871279-86871298 | None:intergenic | 45.0% |
| AAATTCGTTTCCGGTTGTGG+TGG | + | chr7_2:86871707-86871726 | None:intergenic | 45.0% | |
| GTCAAATTCGTTTCCGGTTG+TGG | + | chr7_2:86871710-86871729 | None:intergenic | 45.0% | |
| ATCATCAATTTCGATCCCGG+AGG | + | chr7_2:86871777-86871796 | None:intergenic | 45.0% | |
| ! | CCGGGATCGAAATTGATGAT+TGG | - | chr7_2:86871777-86871796 | Msa1085860:intron | 45.0% |
| ! | TTTTCCGACGAACAACCACA+AGG | - | chr7_2:86871863-86871882 | Msa1085860:CDS | 45.0% |
| ! | ACAGTGCTACTCATTCTCAC+CGG | - | chr7_2:86871915-86871934 | Msa1085860:CDS | 45.0% |
| GAGTCGTGATTCTTCAATGC+TGG | - | chr7_2:86871984-86872003 | Msa1085860:intron | 45.0% | |
| CTTCACGTAACCGTCTTCTT+CGG | - | chr7_2:86872016-86872035 | Msa1085860:intron | 45.0% | |
| TTCGTTGCTTCCGAAGAAGA+CGG | + | chr7_2:86872029-86872048 | None:intergenic | 45.0% | |
| GGAAGCAACGAACACAGAAT+CGG | - | chr7_2:86872037-86872056 | Msa1085860:intron | 45.0% | |
| CGCAAGAAATCGCACCAATT+TGG | - | chr7_2:86872096-86872115 | Msa1085860:intron | 45.0% | |
| ! | GATGGATTCTCCGTCCAAAT+TGG | + | chr7_2:86872113-86872132 | None:intergenic | 45.0% |
| GGAGAAGAAACCGGAACAAT+CGG | - | chr7_2:86872152-86872171 | Msa1085860:intron | 45.0% | |
| TTGATTCTTCAGCTTCGCAC+AGG | + | chr7_2:86872202-86872221 | None:intergenic | 45.0% | |
| TCCGCTTCCGATTCAGATAT+TGG | + | chr7_2:86872266-86872285 | None:intergenic | 45.0% | |
| TTCTTCCACTGCTACAAGTG+TGG | - | chr7_2:86872674-86872693 | Msa1085860:intron | 45.0% | |
| ACTTACCACACTTGTAGCAG+TGG | + | chr7_2:86872682-86872701 | None:intergenic | 45.0% | |
| ACATAGTTGTATGGCCACGA+TGG | + | chr7_2:86873597-86873616 | None:intergenic | 45.0% | |
| ATGCACTCTCTTGACAGGTT+TGG | - | chr7_2:86873657-86873676 | Msa1085860:intron | 45.0% | |
| TAGTGGCTACCCATTTGCAT+CGG | - | chr7_2:86873850-86873869 | Msa1085860:intron | 45.0% | |
| ! | TGGAAATGCATGAGTTGAGC+GGG | - | chr7_2:86873888-86873907 | Msa1085860:intron | 45.0% |
| !! | TTCATTGTGCTTGCTGTTGC+AGG | - | chr7_2:86873933-86873952 | Msa1085860:intron | 45.0% |
| TTTGGCATGGGAAAATCTGC+TGG | - | chr7_2:86874207-86874226 | Msa1085860:five_prime_UTR | 45.0% | |
| !!! | AAAATAACTTTTTTTTTTTA+AGG | + | chr7_2:86868893-86868912 | None:intergenic | 5.0% |
| GCAGTAAATGCTTGCGTGTC+AGG | + | chr7_2:86868218-86868237 | None:intergenic | 50.0% | |
| ! | TTATGAAAGTGGTGGGGTGG+GGG | - | chr7_2:86868304-86868323 | Msa1085860:three_prime_UTR | 50.0% |
| ! | TGTTTTGTCTGCTGGGTCAG+GGG | - | chr7_2:86868384-86868403 | Msa1085860:three_prime_UTR | 50.0% |
| ! | AGAATGGCCGGTCTTGTGTT+CGG | + | chr7_2:86868426-86868445 | None:intergenic | 50.0% |
| AGTGAGCATCATGGGAGAAG+TGG | - | chr7_2:86869365-86869384 | Msa1085860:intron | 50.0% | |
| !! | ACCGGAGAAGGTGTCGTATT+AGG | - | chr7_2:86869658-86869677 | Msa1085860:intron | 50.0% |
| CCCTAATACGACACCTTCTC+CGG | + | chr7_2:86869662-86869681 | None:intergenic | 50.0% | |
| !! | CCGGAGAAGGTGTCGTATTA+GGG | - | chr7_2:86869659-86869678 | Msa1085860:intron | 50.0% |
| TACCTGTTTGACCTGATGGC+GGG | + | chr7_2:86870115-86870134 | None:intergenic | 50.0% | |
| AAGCAGCAGTACCATTGCAG+TGG | - | chr7_2:86870597-86870616 | Msa1085860:intron | 50.0% | |
| CAGTACCATTGCAGTGGTTG+TGG | - | chr7_2:86870603-86870622 | Msa1085860:intron | 50.0% | |
| GCAGTGGTTGTGGAATTTGC+AGG | - | chr7_2:86870613-86870632 | Msa1085860:intron | 50.0% | |
| TCACTGACAGCGAACGTGTT+TGG | + | chr7_2:86871506-86871525 | None:intergenic | 50.0% | |
| ACTTTCTTGCCTCGATCCCA+TGG | - | chr7_2:86871678-86871697 | Msa1085860:intron | 50.0% | |
| GAACGAACCTGTTCTTCCTC+CGG | - | chr7_2:86871758-86871777 | Msa1085860:intron | 50.0% | |
| AACGAACCTGTTCTTCCTCC+GGG | - | chr7_2:86871759-86871778 | Msa1085860:intron | 50.0% | |
| TGTGCCTTGTGGTTGTTCGT+CGG | + | chr7_2:86871870-86871889 | None:intergenic | 50.0% | |
| ACGAACAACCACAAGGCACA+AGG | - | chr7_2:86871870-86871889 | Msa1085860:CDS | 50.0% | |
| AGAGCTCATCGCAGCTTTAC+CGG | + | chr7_2:86871937-86871956 | None:intergenic | 50.0% | |
| CGAAGAAGACGGTTACGTGA+AGG | + | chr7_2:86872018-86872037 | None:intergenic | 50.0% | |
| ! | GCTTCGCACAGGTTCGTTTT+CGG | + | chr7_2:86872191-86872210 | None:intergenic | 50.0% |
| TGGTATCAGAGCGATACCCT+AGG | + | chr7_2:86872310-86872329 | None:intergenic | 50.0% | |
| GAAAAACGGTCACCCTTGTG+TGG | - | chr7_2:86872822-86872841 | Msa1085860:intron | 50.0% | |
| GCATTGCTCCTTCCACACAA+GGG | + | chr7_2:86872837-86872856 | None:intergenic | 50.0% | |
| TGCATTGCTCCTTCCACACA+AGG | + | chr7_2:86872838-86872857 | None:intergenic | 50.0% | |
| GATGTCTCCGTGTTGCATTG+CGG | - | chr7_2:86873004-86873023 | Msa1085860:CDS | 50.0% | |
| TGTATGGCCGCAATGCAACA+CGG | + | chr7_2:86873014-86873033 | None:intergenic | 50.0% | |
| !! | TTGTGCTTGCTGTTGCAGGT+TGG | - | chr7_2:86873937-86873956 | Msa1085860:intron | 50.0% |
| !! | TGTGCTTGCTGTTGCAGGTT+GGG | - | chr7_2:86873938-86873957 | Msa1085860:intron | 50.0% |
| ! | TGGGTCAGGGGAGCTCTAAT+CGG | - | chr7_2:86868396-86868415 | Msa1085860:three_prime_UTR | 55.0% |
| ! | ACCTGTTTGACCTGATGGCG+GGG | + | chr7_2:86870114-86870133 | None:intergenic | 55.0% |
| CCATCAGAACATGTGGGCCT+GGG | + | chr7_2:86871202-86871221 | None:intergenic | 55.0% | |
| CCAGGCCCACATGTTCTGAT+GGG | - | chr7_2:86871200-86871219 | Msa1085860:intron | 55.0% | |
| ! | TGGTGGATACCATGGGATCG+AGG | + | chr7_2:86871690-86871709 | None:intergenic | 55.0% |
| !! | CCGGTTGTGGTGGATACCAT+GGG | + | chr7_2:86871697-86871716 | None:intergenic | 55.0% |
| CCCATGGTATCCACCACAAC+CGG | - | chr7_2:86871694-86871713 | Msa1085860:intron | 55.0% | |
| !! | TCCGGTTGTGGTGGATACCA+TGG | + | chr7_2:86871698-86871717 | None:intergenic | 55.0% |
| TTCGATCCCGGAGGAAGAAC+AGG | + | chr7_2:86871768-86871787 | None:intergenic | 55.0% | |
| CCACAAGGCACAAGGTTTCG+CGG | - | chr7_2:86871878-86871897 | Msa1085860:CDS | 55.0% | |
| AACGGTCACCCTTGTGTGGA+AGG | - | chr7_2:86872826-86872845 | Msa1085860:intron | 55.0% | |
| !! | GTGCTTGCTGTTGCAGGTTG+GGG | - | chr7_2:86873939-86873958 | Msa1085860:intron | 55.0% |
| ! | TGCAGGTTGGGGCAACTAGT+TGG | - | chr7_2:86873950-86873969 | Msa1085860:intron | 55.0% |
| CGGAGCTCCGAACACAAGAC+CGG | - | chr7_2:86868416-86868435 | Msa1085860:three_prime_UTR | 60.0% | |
| ACACGACATTCCCCGCCATC+AGG | - | chr7_2:86870101-86870120 | Msa1085860:intron | 60.0% | |
| TCCCCGCCATCAGGTCAAAC+AGG | - | chr7_2:86870110-86870129 | Msa1085860:intron | 60.0% | |
| CCCAGGCCCACATGTTCTGA+TGG | - | chr7_2:86871199-86871218 | Msa1085860:intron | 60.0% | |
| CCCATCAGAACATGTGGGCC+TGG | + | chr7_2:86871203-86871222 | None:intergenic | 60.0% | |
| CCGCGAAACCTTGTGCCTTG+TGG | + | chr7_2:86871881-86871900 | None:intergenic | 60.0% | |
| CAAGGCACAAGGTTTCGCGG+CGG | - | chr7_2:86871881-86871900 | Msa1085860:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 86868215 | 86874255 | 86868215 | ID=Msa1085860;Name=Msa1085860 |
| chr7_2 | mRNA | 86868215 | 86874255 | 86868215 | ID=Msa1085860-mRNA-1;Parent=Msa1085860;Name=Msa1085860-mRNA-1;_AED=0.09;_eAED=0.09;_QI=319|0.9|0.90|1|0.8|0.81|11|471|287 |
| chr7_2 | exon | 86868215 | 86868796 | 86868215 | ID=Msa1085860-mRNA-1:exon:23615;Parent=Msa1085860-mRNA-1 |
| chr7_2 | exon | 86869259 | 86869304 | 86869259 | ID=Msa1085860-mRNA-1:exon:23614;Parent=Msa1085860-mRNA-1 |
| chr7_2 | exon | 86869396 | 86869487 | 86869396 | ID=Msa1085860-mRNA-1:exon:23613;Parent=Msa1085860-mRNA-1 |
| chr7_2 | exon | 86869588 | 86869670 | 86869588 | ID=Msa1085860-mRNA-1:exon:23612;Parent=Msa1085860-mRNA-1 |
| chr7_2 | exon | 86869775 | 86869815 | 86869775 | ID=Msa1085860-mRNA-1:exon:23611;Parent=Msa1085860-mRNA-1 |
| chr7_2 | exon | 86871836 | 86871957 | 86871836 | ID=Msa1085860-mRNA-1:exon:23610;Parent=Msa1085860-mRNA-1 |
| chr7_2 | exon | 86872197 | 86872229 | 86872197 | ID=Msa1085860-mRNA-1:exon:23609;Parent=Msa1085860-mRNA-1 |
| chr7_2 | exon | 86872339 | 86872398 | 86872339 | ID=Msa1085860-mRNA-1:exon:23608;Parent=Msa1085860-mRNA-1 |
| chr7_2 | exon | 86872736 | 86872823 | 86872736 | ID=Msa1085860-mRNA-1:exon:23607;Parent=Msa1085860-mRNA-1 |
| chr7_2 | exon | 86872908 | 86873157 | 86872908 | ID=Msa1085860-mRNA-1:exon:23606;Parent=Msa1085860-mRNA-1 |
| chr7_2 | exon | 86873999 | 86874255 | 86873999 | ID=Msa1085860-mRNA-1:exon:23605;Parent=Msa1085860-mRNA-1 |
| chr7_2 | five_prime_UTR | 86873999 | 86874255 | 86873999 | ID=Msa1085860-mRNA-1:five_prime_utr;Parent=Msa1085860-mRNA-1 |
| chr7_2 | five_prime_UTR | 86873096 | 86873157 | 86873096 | ID=Msa1085860-mRNA-1:five_prime_utr;Parent=Msa1085860-mRNA-1 |
| chr7_2 | CDS | 86872908 | 86873095 | 86872908 | ID=Msa1085860-mRNA-1:cds;Parent=Msa1085860-mRNA-1 |
| chr7_2 | CDS | 86872736 | 86872823 | 86872736 | ID=Msa1085860-mRNA-1:cds;Parent=Msa1085860-mRNA-1 |
| chr7_2 | CDS | 86872339 | 86872398 | 86872339 | ID=Msa1085860-mRNA-1:cds;Parent=Msa1085860-mRNA-1 |
| chr7_2 | CDS | 86872197 | 86872229 | 86872197 | ID=Msa1085860-mRNA-1:cds;Parent=Msa1085860-mRNA-1 |
| chr7_2 | CDS | 86871836 | 86871957 | 86871836 | ID=Msa1085860-mRNA-1:cds;Parent=Msa1085860-mRNA-1 |
| chr7_2 | CDS | 86869775 | 86869815 | 86869775 | ID=Msa1085860-mRNA-1:cds;Parent=Msa1085860-mRNA-1 |
| chr7_2 | CDS | 86869588 | 86869670 | 86869588 | ID=Msa1085860-mRNA-1:cds;Parent=Msa1085860-mRNA-1 |
| chr7_2 | CDS | 86869396 | 86869487 | 86869396 | ID=Msa1085860-mRNA-1:cds;Parent=Msa1085860-mRNA-1 |
| chr7_2 | CDS | 86869259 | 86869304 | 86869259 | ID=Msa1085860-mRNA-1:cds;Parent=Msa1085860-mRNA-1 |
| chr7_2 | CDS | 86868686 | 86868796 | 86868686 | ID=Msa1085860-mRNA-1:cds;Parent=Msa1085860-mRNA-1 |
| chr7_2 | three_prime_UTR | 86868215 | 86868685 | 86868215 | ID=Msa1085860-mRNA-1:three_prime_utr;Parent=Msa1085860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
