AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1115000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1115000 MtrunA17_Chr7g0257731 96.769 619 15 2 157 775 1 614 0.0 1251
Msa1115000 MtrunA17_Chr1g0173521 77.907 774 136 4 1 774 58 796 0.0 1241
Msa1115000 MtrunA17_Chr5g0447201 58.376 788 287 6 1 775 1 760 0.0 948
Msa1115000 MtrunA17_Chr4g0064311 54.427 768 305 8 1 764 98 824 0.0 843
Msa1115000 MtrunA17_Chr3g0116641 48.235 765 355 5 1 755 1 734 0.0 757
Msa1115000 MtrunA17_Chr4g0058701 38.247 787 413 15 7 762 22 766 0.0 537
Msa1115000 MtrunA17_Chr3g0117141 37.437 788 422 14 6 762 27 774 1.43e-178 531
Msa1115000 MtrunA17_Chr6g0449521 37.611 787 426 14 7 769 35 780 2.91e-177 528
Msa1115000 MtrunA17_Chr1g0201161 32.789 674 325 15 5 569 20 674 5.72e-107 348
Msa1115000 MtrunA17_Chr1g0201161 28.641 206 109 5 565 764 739 912 1.47e-16 84.3
Msa1115000 MtrunA17_Chr7g0267991 36.471 510 275 8 263 755 363 840 1.05e-96 319
Msa1115000 MtrunA17_Chr7g0267991 33.663 303 171 4 5 285 16 310 3.71e-44 171
Msa1115000 MtrunA17_Chr7g0257741 97.222 144 4 0 1 144 1 144 4.10e-94 290
Msa1115000 MtrunA17_Chr8g0380141 43.161 329 174 4 286 604 380 705 2.11e-80 272
Msa1115000 MtrunA17_Chr8g0380141 33.784 296 166 4 5 278 15 302 4.17e-46 176
Msa1115000 MtrunA17_Chr7g0270181 35.561 374 200 7 391 755 4 345 3.37e-65 221
Msa1115000 MtrunA17_Chr5g0427081 61.972 142 54 0 510 651 10 151 2.93e-57 192
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1115000 AT3G57520.1 77.964 776 167 3 1 775 1 773 0.0 1296
Msa1115000 AT3G57520.2 82.067 658 115 2 1 657 1 656 0.0 1160
Msa1115000 AT3G57520.3 83.848 551 86 2 1 550 1 549 0.0 989
Msa1115000 AT1G55740.1 57.455 778 303 5 1 774 1 754 0.0 910
Msa1115000 AT5G20250.4 52.978 789 317 10 1 775 96 844 0.0 849
Msa1115000 AT5G20250.3 52.978 789 317 10 1 775 1 749 0.0 848
Msa1115000 AT5G20250.1 52.978 789 317 10 1 775 1 749 0.0 848
Msa1115000 AT5G20250.2 52.978 789 317 10 1 775 1 749 0.0 848
Msa1115000 AT5G40390.1 37.183 788 429 15 3 760 18 769 5.67e-175 522
Msa1115000 AT4G01970.1 36.040 505 276 10 278 764 390 865 1.09e-99 328
Msa1115000 AT4G01970.1 33.559 295 167 4 5 278 32 318 6.30e-46 177
Msa1115000 AT4G01970.2 36.238 505 275 11 278 764 437 912 2.64e-99 328
Msa1115000 AT4G01970.2 33.559 295 167 4 5 278 79 365 6.39e-46 177

Find 238 sgRNAs with CRISPR-Local

Find 402 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCGACTATAACTCAGAAAA+TGG 0.147078 7_3:-62016244 Msa1115000:CDS
CACTGTCTTGCTTCCTCTAT+TGG 0.218826 7_3:-62019865 Msa1115000:CDS
GTGAGAGGAAGTGGCAAGTT+TGG 0.230018 7_3:-62016322 Msa1115000:CDS
TGGCTGTACCTGACATAAAT+TGG 0.235428 7_3:+62017376 None:intergenic
TCCAGAACCTTTAGTGTTAC+TGG 0.237610 7_3:+62016669 None:intergenic
TAGAAGTTGAAAACCTTCTT+TGG 0.248800 7_3:+62017906 None:intergenic
TACTATGTTGACAGGGATTA+AGG 0.255952 7_3:-62018328 Msa1115000:CDS
CTCTCAATAATTACCTCTTC+AGG 0.263798 7_3:+62018720 None:intergenic
AGAAGTGGAGAAATGTAAAT+TGG 0.264085 7_3:+62021352 None:intergenic
TGTATGCAACAGACGAAATA+TGG 0.276352 7_3:+62017604 None:intergenic
AGCTGAGAGATTGGGAGAAT+TGG 0.278301 7_3:-62016066 Msa1115000:three_prime_UTR
GGTAATAACTACTACACTTT+TGG 0.284207 7_3:-62016097 Msa1115000:three_prime_UTR
GGCATGCACTAGCTGGTTAT+TGG 0.312406 7_3:-62018070 Msa1115000:CDS
ATTGTTTGAAATGTTGAAAC+AGG 0.315736 7_3:-62015723 Msa1115000:three_prime_UTR
CTTGCTACTGGTGCATTCAT+TGG 0.327320 7_3:-62020417 Msa1115000:CDS
TCCGGTTCATGTGTTGCTTC+CGG 0.327355 7_3:-62020013 Msa1115000:CDS
GTTTGTTGTCGGAGGCTCTA+TGG 0.328560 7_3:+62016431 None:intergenic
GCATGCACTAGCTGGTTATT+GGG 0.328612 7_3:-62018069 Msa1115000:CDS
GTGTTTAACTGCCAAGGTGC+TGG 0.339583 7_3:-62016981 Msa1115000:CDS
TACATGTCCTCTTGAGGAAC+TGG 0.342287 7_3:+62016202 None:intergenic
CTCAAGAGGACATGTATAAA+TGG 0.343824 7_3:-62016195 Msa1115000:CDS
TCCAGTAACACTAAAGGTTC+TGG 0.349503 7_3:-62016670 Msa1115000:CDS
TTAGCTTCATGTGGAGTAGA+TGG 0.351053 7_3:-62017864 Msa1115000:CDS
GAGTCGCGCGTAGGCCTTCC+AGG 0.352046 7_3:+62017181 None:intergenic
GTTTGAAATATTGTTGAGAT+TGG 0.372036 7_3:-62015828 Msa1115000:three_prime_UTR
ATTGTTTATGCTTACAGATC+AGG 0.375493 7_3:-62016831 Msa1115000:intron
TTCTGGGACACCTTTCAGTA+TGG 0.381592 7_3:+62020473 None:intergenic
ATTTGATGGTGAGGTTGTTT+CGG 0.382497 7_3:-62016401 Msa1115000:CDS
GTTGCGGTTGTCGTTCGGTT+AGG 0.382622 7_3:+62016358 None:intergenic
GTTATAGTCGAAATCGGTTT+CGG 0.390950 7_3:+62016255 None:intergenic
AACCTGGTCCTATCTCTTGC+CGG 0.393609 7_3:+62017145 None:intergenic
GTTGTGCTGACTCCAGATTC+TGG 0.395496 7_3:-62020447 Msa1115000:CDS
GCAAGACCATTACCAGAATC+TGG 0.395635 7_3:+62020435 None:intergenic
TTACTTGGATTGGACAGAAA+TGG 0.398060 7_3:+62016634 None:intergenic
CAATAGTTGCGGTTGTCGTT+CGG 0.403594 7_3:+62016353 None:intergenic
CATGCCGCAGCTCGCGCAAT+CGG 0.407273 7_3:-62017406 Msa1115000:CDS
CAAAGATAGTGAAGGGGAAG+GGG 0.407874 7_3:-62019907 Msa1115000:CDS
CTTGCTAATTACAGGTTCCT+TGG 0.408729 7_3:+62015771 None:intergenic
TTCTGAGTTATAGTCGAAAT+CGG 0.409621 7_3:+62016249 None:intergenic
AGCTTGTCTGTACATGGCCT+TGG 0.409675 7_3:-62017939 Msa1115000:CDS
CTCCGTTGACAATGGAAACT+TGG 0.412220 7_3:-62020511 Msa1115000:CDS
AACAAACAAGAGCTATTTGA+TGG 0.419926 7_3:-62016415 Msa1115000:CDS
CCGCTGAAGTGTGCGGTAGA+TGG 0.424658 7_3:-62016280 Msa1115000:CDS
GTACCATGTAGCTGAGAGAT+TGG 0.427467 7_3:-62016075 Msa1115000:three_prime_UTR
CTGTGTTGAACATGTCCATC+AGG 0.430121 7_3:+62016479 None:intergenic
AAATAGCTCTTGTTTGTTGT+CGG 0.430180 7_3:+62016420 None:intergenic
TGTTCCATGCCAGTCGCTGC+TGG 0.432967 7_3:+62018035 None:intergenic
GAGAGTTTATGCAGCCAGAT+TGG 0.433623 7_3:-62017566 Msa1115000:CDS
GCTGAGAGATTGGGAGAATT+GGG 0.434764 7_3:-62016065 Msa1115000:three_prime_UTR
TTGTTGATCCGGCAAGAGAT+AGG 0.436763 7_3:-62017153 Msa1115000:CDS
GGTATATCATTTGCAGCAAT+AGG 0.437403 7_3:-62016502 Msa1115000:CDS
TATTTATTGAAATGTGTTGT+AGG 0.440767 7_3:-62016134 Msa1115000:three_prime_UTR
AGAGTTTATGCAGCCAGATT+GGG 0.441087 7_3:-62017565 Msa1115000:CDS
GTTGCTTCCGGTTCAAGTTA+TGG 0.442102 7_3:-62020001 Msa1115000:CDS
ACTGGAATCGAAGCCCCTTT+CGG 0.442762 7_3:+62016687 None:intergenic
GCAAAGATAGTGAAGGGGAA+GGG 0.444337 7_3:-62019908 Msa1115000:CDS
GGTTGGTTTCCTAGTACTCC+TGG 0.446461 7_3:+62017978 None:intergenic
GCCATTCAGCACCAGCTACT+TGG 0.446935 7_3:+62016865 None:intergenic
ACATGGAACATGTCCCAATC+TGG 0.449730 7_3:+62017552 None:intergenic
ACCGGAAGCAACACATGAAC+CGG 0.451788 7_3:+62020012 None:intergenic
TCTGGTAATGGTCTTGCTAC+TGG 0.451944 7_3:-62020429 Msa1115000:CDS
CTAGAAGTGAAGTACATTCC+AGG 0.452710 7_3:+62021444 None:intergenic
AGGAAGTTGGTTCTTCCTGA+TGG 0.453207 7_3:-62017226 Msa1115000:CDS
ATATGGATGGTGTGGGAAGC+GGG 0.455526 7_3:+62017621 None:intergenic
GTTCTCCGTGCTCAATTACC+TGG 0.455559 7_3:-62017199 Msa1115000:CDS
TTGTGATGTCTTACTTGGAT+TGG 0.455784 7_3:+62016624 None:intergenic
ACATGTTTGGTTGGTGCACA+TGG 0.458709 7_3:-62018787 Msa1115000:CDS
AGGTTTGCTACTATGTTGAC+AGG 0.461841 7_3:-62018336 Msa1115000:CDS
AGGTCAAAATTGTGGTTGCC+TGG 0.463556 7_3:+62017253 None:intergenic
CGGAATGGACCTTCCAATAG+AGG 0.466223 7_3:+62019852 None:intergenic
AAATGTCTTACTTGACGGCT+TGG 0.467405 7_3:+62019481 None:intergenic
TAAGCAGACTGCTGTTGTGC+GGG 0.471205 7_3:-62017670 Msa1115000:CDS
GCTTGGTTGATGACTTCAAA+AGG 0.471651 7_3:+62019498 None:intergenic
TCATCCACCATAACTTGAAC+CGG 0.473225 7_3:+62019994 None:intergenic
GGAGTGAAGCCAGCAGCGAC+TGG 0.474090 7_3:-62018044 Msa1115000:CDS
AGCAAAGATAGTGAAGGGGA+AGG 0.474157 7_3:-62019909 Msa1115000:CDS
TTGAGGAACTGGGATGTAGA+AGG 0.475841 7_3:+62016213 None:intergenic
TCGACTATAACTCAGAAAAT+GGG 0.478523 7_3:-62016243 Msa1115000:CDS
ATTATTGAAACCCTTGGCGC+TGG 0.481937 7_3:-62017819 Msa1115000:CDS
GCCAGCCGTCATCTATGATA+AGG 0.482851 7_3:+62018563 None:intergenic
GTTTGATCTATTAAGGGCTG+TGG 0.485390 7_3:-62018972 Msa1115000:intron
AAATTTCAAAAGAGTAAGAA+TGG 0.489716 7_3:-62018297 Msa1115000:CDS
ATAGAAGAAGCATTCCCTCC+TGG 0.489815 7_3:-62021462 Msa1115000:five_prime_UTR
CCAAACATGTCAAGAAAAGA+TGG 0.490392 7_3:+62018800 None:intergenic
CTGACTCCAGATTCTGGTAA+TGG 0.492309 7_3:-62020441 Msa1115000:CDS
AGAAGGCGGCGCTTGATACA+AGG 0.492725 7_3:+62021040 None:intergenic
GCCGCAGCTCGCGCAATCGG+TGG 0.492913 7_3:-62017403 Msa1115000:CDS
AAGCTGTCCATGACAATGTC+GGG 0.493090 7_3:+62017957 None:intergenic
GTGGTTGTCCAATTTATGTC+AGG 0.493704 7_3:-62017384 Msa1115000:intron
CAAAACATTATTGAAACCCT+TGG 0.493780 7_3:-62017825 Msa1115000:CDS
TTGTAACTTGTAACGTATGT+AGG 0.494826 7_3:-62016025 Msa1115000:three_prime_UTR
GCGGCATGATACTCTGCTGC+CGG 0.499718 7_3:+62017421 None:intergenic
CGCATCCATGATACATCTCC+CGG 0.500427 7_3:-62016933 Msa1115000:CDS
GTCTTGCTTCCTCTATTGGA+AGG 0.500955 7_3:-62019861 Msa1115000:CDS
GCTTTGAAAGTGAGAGGAAG+TGG 0.501703 7_3:-62016331 Msa1115000:CDS
AATATGGATGGTGTGGGAAG+CGG 0.504563 7_3:+62017620 None:intergenic
ATGGTGGATGACACAGAGAA+TGG 0.505089 7_3:-62019982 Msa1115000:CDS
GCCACCATGTCCAGCGCCAA+GGG 0.505764 7_3:+62017809 None:intergenic
AGGCGATTCGATTACCGAAA+GGG 0.505972 7_3:-62016701 Msa1115000:CDS
GTTGATGACTTCAAAAGGAT+TGG 0.506485 7_3:+62019503 None:intergenic
GCATATCCAGTGCAGTCGCC+AGG 0.508937 7_3:-62017996 Msa1115000:CDS
TGTTTAACTGCCAAGGTGCT+GGG 0.509164 7_3:-62016980 Msa1115000:CDS
AGTACTCCTGGCGACTGCAC+TGG 0.509286 7_3:+62017990 None:intergenic
GAGCACAACGAACCGACATC+AGG 0.510486 7_3:-62018273 Msa1115000:CDS
CGACTCACTCTTTGTTGATC+CGG 0.510909 7_3:-62017164 Msa1115000:CDS
TGGACAGAAATGTTTATGTA+TGG 0.510917 7_3:-62018091 Msa1115000:intron
AACAGAACATACTACATCCA+TGG 0.510943 7_3:+62015951 None:intergenic
GATCTCATCAACCAAGTAGC+TGG 0.511507 7_3:-62016876 Msa1115000:CDS
TTCGATTCCAGTAACACTAA+AGG 0.512811 7_3:-62016676 Msa1115000:CDS
CTCCCAATCTCTCAGCTACA+TGG 0.514029 7_3:+62016072 None:intergenic
TGGAACATGAACAAATGTAC+TGG 0.515027 7_3:-62017014 Msa1115000:CDS
GTTTGTAGCTTAGAGAGAAG+TGG 0.515110 7_3:+62021337 None:intergenic
TACCATGTAGCTGAGAGATT+GGG 0.515215 7_3:-62016074 Msa1115000:three_prime_UTR
GTGACTTCAGAGTCTACATC+CGG 0.516712 7_3:-62017440 Msa1115000:intron
TCCTTATCATAGATGACGGC+TGG 0.519332 7_3:-62018564 Msa1115000:CDS
CACATGGTTTACATGCATGC+TGG 0.523137 7_3:-62019528 Msa1115000:CDS
TGGTCTAGTACATCCAAAGA+AGG 0.525051 7_3:-62017919 Msa1115000:CDS
ACCAAGTAGCTGGTGCTGAA+TGG 0.525470 7_3:-62016866 Msa1115000:CDS
GTTGGTGTGTTTAACTGCCA+AGG 0.525917 7_3:-62016987 Msa1115000:CDS
ATCCGGCAAGAGATAGGACC+AGG 0.526010 7_3:-62017147 Msa1115000:intron
GTGTGGGAAGCGGGATCACG+CGG 0.527327 7_3:+62017630 None:intergenic
AACAAATGTACTGGAGTTGT+TGG 0.527809 7_3:-62017005 Msa1115000:CDS
CATGCTTACTTAGCTTCATG+TGG 0.529132 7_3:-62017873 Msa1115000:CDS
TTGTGGAAAGGATATACCTC+TGG 0.530688 7_3:-62019955 Msa1115000:CDS
CCATTCCGATCTGTTCTACA+AGG 0.533937 7_3:-62019837 Msa1115000:CDS
TCCTAAGAAGGTCAAAATTG+TGG 0.534153 7_3:+62017245 None:intergenic
TAGAGAGCAAAGATAGTGAA+GGG 0.534868 7_3:-62019914 Msa1115000:CDS
ATTCAACAGGAAATAGCGCC+TGG 0.535247 7_3:-62016523 Msa1115000:intron
TCTCTAAGCTACAAACGTTA+CGG 0.536355 7_3:-62021330 Msa1115000:intron
TATGTATGGCATGCACTAGC+TGG 0.537814 7_3:-62018077 Msa1115000:CDS
ACTTACTCTAGGATACCAAT+GGG 0.539184 7_3:+62020357 None:intergenic
AATATGTTATTTGTATGCCA+AGG 0.539497 7_3:-62015788 Msa1115000:three_prime_UTR
GTGTACCGGGAGATGTATCA+TGG 0.539582 7_3:+62016928 None:intergenic
GAAGAACCAACTTCCTAAGA+AGG 0.539968 7_3:+62017233 None:intergenic
ATGGACAGCTTGTCTGTACA+TGG 0.544086 7_3:-62017945 Msa1115000:CDS
TTGCAAATTATGTCATGTGT+TGG 0.546197 7_3:-62015996 Msa1115000:three_prime_UTR
CTAAGCAGACTGCTGTTGTG+CGG 0.547653 7_3:-62017671 Msa1115000:CDS
ATTTGCAGCAATAGGCCTGA+TGG 0.548013 7_3:-62016494 Msa1115000:CDS
GGCCACCATGTCCAGCGCCA+AGG 0.548659 7_3:+62017808 None:intergenic
CCTTCTTGTACAACACAGTC+AGG 0.549051 7_3:+62018514 None:intergenic
AACAGAGCTAGTAAGTGTAC+CGG 0.549673 7_3:+62016914 None:intergenic
TGGTGGATGACACAGAGAAT+GGG 0.553636 7_3:-62019981 Msa1115000:CDS
CATGCTGTTGAGACAAATCA+AGG 0.554075 7_3:-62019555 Msa1115000:CDS
ATTTATTGAAATGTGTTGTA+GGG 0.554248 7_3:-62016133 Msa1115000:three_prime_UTR
GAAACCCTTGGCGCTGGACA+TGG 0.554658 7_3:-62017813 Msa1115000:CDS
CAGACGAAATATGGATGGTG+TGG 0.555142 7_3:+62017613 None:intergenic
TAGCTCTTGTTTGTTGTCGG+AGG 0.555302 7_3:+62016423 None:intergenic
TCTAATATCTCCGTTGACAA+TGG 0.555379 7_3:-62020519 Msa1115000:CDS
GGACTGATGTTCTTCTCCCA+TGG 0.559377 7_3:-62015968 Msa1115000:three_prime_UTR
AGCAAGACAGTGTAGACGAT+GGG 0.562425 7_3:+62019876 None:intergenic
CATTTATACATGTCCTCTTG+AGG 0.565403 7_3:+62016196 None:intergenic
GGAACATTACGACACTGCCT+TGG 0.566219 7_3:-62018018 Msa1115000:CDS
CATTGCCTTGTAGAACAGAT+CGG 0.567534 7_3:+62019832 None:intergenic
CACATGAAGCTAAGTAAGCA+TGG 0.569172 7_3:+62017874 None:intergenic
CATGTTTGGTTGGTGCACAT+GGG 0.569269 7_3:-62018786 Msa1115000:CDS
CCTTGCACCACCCAGCACCT+TGG 0.570082 7_3:+62016970 None:intergenic
CAGCTATCATCATGCACTTG+AGG 0.572105 7_3:-62017769 Msa1115000:CDS
CACAGGAGGAGCTGTAGAAG+AGG 0.573007 7_3:-62016461 Msa1115000:CDS
GCACGGAGAACAGAACCATC+AGG 0.573266 7_3:+62017211 None:intergenic
ACAAGAGCTATTTGATGGTG+AGG 0.579627 7_3:-62016410 Msa1115000:CDS
GAAGCCAGCAGCGACTGGCA+TGG 0.580287 7_3:-62018039 Msa1115000:CDS
ACACAGAGAATGGGAACTTG+TGG 0.585275 7_3:-62019972 Msa1115000:CDS
TCCGTGCTCAATTACCTGGA+AGG 0.585493 7_3:-62017195 Msa1115000:CDS
CCAAGGTGCTGGGTGGTGCA+AGG 0.585557 7_3:-62016970 Msa1115000:CDS
CTACATCCCAGTTCCTCAAG+AGG 0.585688 7_3:-62016209 Msa1115000:CDS
TATACTGACGTAACAGCTGA+AGG 0.586199 7_3:-62018755 Msa1115000:CDS
CATGCACTAGCTGGTTATTG+GGG 0.586529 7_3:-62018068 Msa1115000:CDS
ATAGAGAGCAAAGATAGTGA+AGG 0.587130 7_3:-62019915 Msa1115000:CDS
ATGTGGAGTAGATGGAGTGA+AGG 0.587223 7_3:-62017856 Msa1115000:CDS
AACTTACTCTAGGATACCAA+TGG 0.587431 7_3:+62020356 None:intergenic
CAAGCTGTCCATGACAATGT+CGG 0.588661 7_3:+62017956 None:intergenic
AAACCAACCCGACATTGTCA+TGG 0.589230 7_3:-62017964 Msa1115000:CDS
GGCGATTCGATTACCGAAAG+GGG 0.589332 7_3:-62016700 Msa1115000:CDS
ACCACCGATTGCGCGAGCTG+CGG 0.590946 7_3:+62017402 None:intergenic
ACTATTGCTTTGAAAGTGAG+AGG 0.591713 7_3:-62016337 Msa1115000:CDS
ACAGATTGAAACTAAAGCAA+AGG 0.591790 7_3:-62018539 Msa1115000:CDS
AACCAAGTTTCCATTGTCAA+CGG 0.591988 7_3:+62020509 None:intergenic
CGTAACAGCTGAAGGTGTTG+AGG 0.592074 7_3:-62018747 Msa1115000:CDS
AGAGATTGGGAGAATTGGGT+TGG 0.592402 7_3:-62016061 Msa1115000:three_prime_UTR
ACAGAACATACTACATCCAT+GGG 0.593484 7_3:+62015952 None:intergenic
CTGGCTGCATAAACTCTCCA+AGG 0.593964 7_3:+62017571 None:intergenic
TGTATGTGTCATAACACTGA+TGG 0.596890 7_3:-62017705 Msa1115000:CDS
CACTTTCAAAGCAATAGTTG+CGG 0.598073 7_3:+62016342 None:intergenic
CCTGACTGTGTTGTACAAGA+AGG 0.599674 7_3:-62018514 Msa1115000:CDS
AAGCAAGACAGTGTAGACGA+TGG 0.601592 7_3:+62019875 None:intergenic
AATGGAAACTTGGTTGTCCA+TGG 0.602249 7_3:-62020501 Msa1115000:CDS
GCCTTCCAGGTAATTGAGCA+CGG 0.603174 7_3:+62017194 None:intergenic
TTATGTCATGTGTTGGAGAG+AGG 0.603992 7_3:-62015989 Msa1115000:three_prime_UTR
ACAGCTGAAGGTGTTGAGGA+AGG 0.604487 7_3:-62018743 Msa1115000:CDS
GACAAATCAAGGCCTTCACA+TGG 0.607264 7_3:-62019544 Msa1115000:CDS
CTTTCAGTATGGTCTTGCCA+TGG 0.607579 7_3:+62020484 None:intergenic
ATCGAGATCTGCTTTGAGAG+TGG 0.608814 7_3:-62019798 Msa1115000:intron
GCGCCGCCTTCTGTATCACA+AGG 0.611777 7_3:-62021029 Msa1115000:five_prime_UTR
ACATGTCCTCTTGAGGAACT+GGG 0.612797 7_3:+62016203 None:intergenic
AGACGAAATATGGATGGTGT+GGG 0.612912 7_3:+62017614 None:intergenic
CCAGCGTCCGCTGAAGTGTG+CGG 0.613170 7_3:-62016287 Msa1115000:CDS
ATGTAACTGCAGTCTATCAG+AGG 0.613259 7_3:-62018605 Msa1115000:intron
GCACTAGCTGGTTATTGGGG+CGG 0.613817 7_3:-62018065 Msa1115000:CDS
ATTGCTGCAAATGATATACC+AGG 0.615317 7_3:+62016505 None:intergenic
TGTCCATGACAATGTCGGGT+TGG 0.616272 7_3:+62017961 None:intergenic
GGTCTTAAACATCTAGTAGA+CGG 0.618889 7_3:-62018252 Msa1115000:CDS
GAAGGCGGCGCTTGATACAA+GGG 0.620962 7_3:+62021041 None:intergenic
GAGAATGGGAACTTGTGGAA+AGG 0.621348 7_3:-62019967 Msa1115000:CDS
CGGTTCCTTATCATAGATGA+CGG 0.623972 7_3:-62018568 Msa1115000:CDS
AGAGAGCAAAGATAGTGAAG+GGG 0.624763 7_3:-62019913 Msa1115000:CDS
CCATCTACCGCACACTTCAG+CGG 0.625492 7_3:+62016280 None:intergenic
CGACTGCACTGGATATGCCA+AGG 0.626866 7_3:+62018001 None:intergenic
CCTTGTAGAACAGATCGGAA+TGG 0.630384 7_3:+62019837 None:intergenic
AGCTGCGAGTAAGTGAGACT+CGG 0.633741 7_3:+62017787 None:intergenic
TGTAACTGCAGTCTATCAGA+GGG 0.634473 7_3:-62018604 Msa1115000:intron
CATGGCAAGACCATACTGAA+AGG 0.639275 7_3:-62020483 Msa1115000:CDS
GGTTTGCTACTATGTTGACA+GGG 0.639787 7_3:-62018335 Msa1115000:CDS
AACACAGTGATTAAGTGCTG+AGG 0.640837 7_3:-62020558 Msa1115000:intron
GTGTTGAGGAAGGCCTGAAG+AGG 0.642831 7_3:-62018733 Msa1115000:intron
ACAAAGAGTGAGTCGCGCGT+AGG 0.646366 7_3:+62017172 None:intergenic
TTATACCCTTGTGATACAGA+AGG 0.646776 7_3:+62021023 None:intergenic
CATGCATGTAAACCATGTGA+AGG 0.648775 7_3:+62019532 None:intergenic
TGTGGGAAGCGGGATCACGC+GGG 0.652404 7_3:+62017631 None:intergenic
GTAGCTGGTGCTGAATGGCA+TGG 0.653985 7_3:-62016861 Msa1115000:CDS
GCTTCCGGTTCAAGTTATGG+TGG 0.656444 7_3:-62019998 Msa1115000:CDS
TCTTTGGATGTACTAGACCA+AGG 0.658245 7_3:+62017922 None:intergenic
TACCCTTGTGATACAGAAGG+CGG 0.660103 7_3:+62021026 None:intergenic
ACAGAGCTAGTAAGTGTACC+GGG 0.660441 7_3:+62016915 None:intergenic
ATGGACATGTTCAACACAGG+AGG 0.660528 7_3:-62016475 Msa1115000:CDS
ACACTTCAGCGGACGCTGGG+AGG 0.665564 7_3:+62016291 None:intergenic
ACCCTTGGCGCTGGACATGG+TGG 0.666705 7_3:-62017810 Msa1115000:CDS
AAGTGAAGTACATTCCAGGA+GGG 0.675086 7_3:+62021448 None:intergenic
GTTGATGAGATCAACATCAG+AGG 0.675809 7_3:+62016887 None:intergenic
CTGATGGACATGTTCAACAC+AGG 0.676150 7_3:-62016478 Msa1115000:CDS
AGATGTTTAAGACCTGATGT+CGG 0.681015 7_3:+62018261 None:intergenic
CGCCGCCTTCTGTATCACAA+GGG 0.681160 7_3:-62021028 Msa1115000:intron
TGCAACAGACGAAATATGGA+TGG 0.685520 7_3:+62017608 None:intergenic
GAAGTGAAGTACATTCCAGG+AGG 0.688983 7_3:+62021447 None:intergenic
TTAACTGCCAAGGTGCTGGG+TGG 0.696652 7_3:-62016977 Msa1115000:CDS
AGCATGAATTGAGTCTCCAG+AGG 0.706669 7_3:+62019939 None:intergenic
AACTGCAGTCTATCAGAGGG+AGG 0.707342 7_3:-62018601 Msa1115000:intron
TCATCTATGATAAGGAACCG+CGG 0.749631 7_3:+62018571 None:intergenic
TCTATGATAAGGAACCGCGG+AGG 0.806296 7_3:+62018574 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTTTTTTATTTTGTGA+CGG + chr7_3:62016463-62016482 None:intergenic 10.0%
!! TAATTATTCAAATTCTTAAT+TGG - chr7_3:62019140-62019159 Msa1115000:intron 10.0%
!! TTGAAGATGATAATTAATTA+TGG - chr7_3:62016037-62016056 Msa1115000:three_prime_UTR 15.0%
!!! TTTTATGAGAAGAAAAATAA+TGG + chr7_3:62016292-62016311 None:intergenic 15.0%
!!! TATTTTTCTTCTCATAAAAT+TGG - chr7_3:62016293-62016312 Msa1115000:CDS 15.0%
!! TTCTAATATAAAAATATGCA+TGG + chr7_3:62016333-62016352 None:intergenic 15.0%
!! TAAATTGTAATTATTATTGC+AGG - chr7_3:62018910-62018929 Msa1115000:intron 15.0%
!! TTGAATAAAAAAGTAAGTTA+AGG + chr7_3:62019078-62019097 None:intergenic 15.0%
!!! TTTTTTTTCCTTTTAAAGTC+AGG - chr7_3:62016168-62016187 Msa1115000:exon 20.0%
!!! TTTTTCTCACAAAAAATCAA+TGG - chr7_3:62016499-62016518 Msa1115000:CDS 20.0%
!! TTAATACTACTAACTAAGTT+TGG + chr7_3:62016525-62016544 None:intergenic 20.0%
!! TACTATTGATGTACAAAATT+TGG - chr7_3:62016555-62016574 Msa1115000:intron 20.0%
!! AAATGATGAAAATTATGATG+CGG + chr7_3:62016993-62017012 None:intergenic 20.0%
!! TTTGATATTTCGATAAATCA+CGG - chr7_3:62017039-62017058 Msa1115000:intron 20.0%
!!! CTTTGGAGAAAATATATATA+AGG - chr7_3:62017637-62017656 Msa1115000:CDS 20.0%
!! AATAAGCTAAAAATCGTTTA+TGG + chr7_3:62017894-62017913 None:intergenic 20.0%
!! GTTAGAATATATTCTTCATT+TGG - chr7_3:62018218-62018237 Msa1115000:intron 20.0%
!! TTAATAGATCAAACAGAAAA+AGG + chr7_3:62018288-62018307 None:intergenic 20.0%
!!! TTTTTCTGTTTGATCTATTA+AGG - chr7_3:62018287-62018306 Msa1115000:CDS 20.0%
!!! TTTTCTGTTTGATCTATTAA+GGG - chr7_3:62018288-62018307 Msa1115000:CDS 20.0%
!! AAATTTCAAAAGAGTAAGAA+TGG - chr7_3:62018969-62018988 Msa1115000:intron 20.0%
!! AAAAAGTAAGTTAAGGAAAT+AGG + chr7_3:62019071-62019090 None:intergenic 20.0%
!!! ATGTAATGTTTTTATTCAAC+AGG - chr7_3:62020730-62020749 Msa1115000:intron 20.0%
!! TATTTATTGAAATGTGTTGT+AGG - chr7_3:62021132-62021151 Msa1115000:intron 20.0%
!! ATTTATTGAAATGTGTTGTA+GGG - chr7_3:62021133-62021152 Msa1115000:intron 20.0%
!! TAGAAAAATAAGATTGTTGA+GGG - chr7_3:62021518-62021537 Msa1115000:five_prime_UTR 20.0%
!! TTTTGTTAGATTCACTTTGT+AGG - chr7_3:62016075-62016094 Msa1115000:three_prime_UTR 25.0%
! AAAGTAAACCTGACTTTAAA+AGG + chr7_3:62016179-62016198 None:intergenic 25.0%
!!! TTTACTTTTTTCTTCAGTGA+CGG - chr7_3:62016191-62016210 Msa1115000:CDS 25.0%
! AATTGGGAAAACTTAATTGT+TGG - chr7_3:62016264-62016283 Msa1115000:CDS 25.0%
!!! TTTTTTATTTTGTGACGGAA+AGG + chr7_3:62016458-62016477 None:intergenic 25.0%
!! ATTTGGATATAACGTTCTTT+TGG - chr7_3:62016572-62016591 Msa1115000:intron 25.0%
!!! CTTATCAAGGTTTTAAATCA+CGG - chr7_3:62016949-62016968 Msa1115000:CDS 25.0%
! TGGAGAAAATATATATAAGG+TGG - chr7_3:62017640-62017659 Msa1115000:CDS 25.0%
! ACACTTATATGATAAGTGTT+TGG - chr7_3:62018016-62018035 Msa1115000:CDS 25.0%
! CACTTATATGATAAGTGTTT+GGG - chr7_3:62018017-62018036 Msa1115000:CDS 25.0%
! ATAAGGTAATCATTATGCAT+AGG + chr7_3:62018400-62018419 None:intergenic 25.0%
! TATGCATAATGATTACCTTA+TGG - chr7_3:62018399-62018418 Msa1115000:intron 25.0%
!! TTAATTGGTTACTTTGTTGA+TGG - chr7_3:62019155-62019174 Msa1115000:intron 25.0%
! TGAATTTGGTATAACTTACA+TGG + chr7_3:62019734-62019753 None:intergenic 25.0%
! ATTATAATTGGAGGTGAATT+TGG + chr7_3:62019748-62019767 None:intergenic 25.0%
! AAATTAACATCTGAAAAAGC+AGG + chr7_3:62019780-62019799 None:intergenic 25.0%
!! AGGTTTAGAATTGGATAATA+TGG + chr7_3:62019913-62019932 None:intergenic 25.0%
!! ATGAAAAACAGGTTTAGAAT+TGG + chr7_3:62019922-62019941 None:intergenic 25.0%
!!! AACCTGTTTTTCATACATAT+TGG - chr7_3:62019928-62019947 Msa1115000:CDS 25.0%
! TTCCAATATGTATGAAAAAC+AGG + chr7_3:62019933-62019952 None:intergenic 25.0%
!!! GTGTTTTTATGACTTAAACT+TGG + chr7_3:62021108-62021127 None:intergenic 25.0%
! GTTTAAGTCATAAAAACACT+TGG - chr7_3:62021109-62021128 Msa1115000:intron 25.0%
!! GTTTGAAATATTGTTGAGAT+TGG - chr7_3:62021438-62021457 Msa1115000:five_prime_UTR 25.0%
!! AATATGTTATTTGTATGCCA+AGG - chr7_3:62021478-62021497 Msa1115000:five_prime_UTR 25.0%
!!! TTTTTCTACTTGCTAATTAC+AGG + chr7_3:62021506-62021525 None:intergenic 25.0%
! GTAGAAAAATAAGATTGTTG+AGG - chr7_3:62021517-62021536 Msa1115000:five_prime_UTR 25.0%
!! ATTGTTTGAAATGTTGAAAC+AGG - chr7_3:62021543-62021562 Msa1115000:five_prime_UTR 25.0%
AGAAGTGGAGAAATGTAAAT+TGG + chr7_3:62015917-62015936 None:intergenic 30.0%
TTCGGTTATTGTAAGATAAG+AGG - chr7_3:62015963-62015982 Msa1115000:three_prime_UTR 30.0%
! GATGAACTTGTCTTTCATTT+TGG - chr7_3:62016112-62016131 Msa1115000:three_prime_UTR 30.0%
! TGTATCACAAGGGTATAATT+GGG - chr7_3:62016248-62016267 Msa1115000:CDS 30.0%
TGTTACGATAGCAAACAATA+CGG + chr7_3:62016692-62016711 None:intergenic 30.0%
CGTGATTAACTAGAATATCA+CGG + chr7_3:62017077-62017096 None:intergenic 30.0%
! CGTGATATTCTAGTTAATCA+CGG - chr7_3:62017075-62017094 Msa1115000:intron 30.0%
ACATGGTCAGCAAAAAAAAA+AGG + chr7_3:62017174-62017193 None:intergenic 30.0%
GTTTCAATAAAAGCAGAACA+TGG + chr7_3:62017191-62017210 None:intergenic 30.0%
ACTCTTTATCATGCGAAAAA+CGG - chr7_3:62017497-62017516 Msa1115000:intron 30.0%
ATACCAAAAGGAGTTTGATT+GGG + chr7_3:62017669-62017688 None:intergenic 30.0%
AAACCAAATCACATACCAAA+AGG + chr7_3:62017681-62017700 None:intergenic 30.0%
TAAGCATTTGTGAGATTGTT+TGG - chr7_3:62017838-62017857 Msa1115000:CDS 30.0%
AGAGCTTATGAAAAAAACGT+AGG - chr7_3:62017862-62017881 Msa1115000:CDS 30.0%
TTAAGTCAGTTAAACGATCA+CGG + chr7_3:62018165-62018184 None:intergenic 30.0%
TAACTACTACAATGCAAACA+AGG + chr7_3:62018202-62018221 None:intergenic 30.0%
ACAAGGTTAAAAGATCCATA+AGG + chr7_3:62018417-62018436 None:intergenic 30.0%
ACAGATTGAAACTAAAGCAA+AGG - chr7_3:62018727-62018746 Msa1115000:intron 30.0%
AAACATCACAATGTCAAGTA+TGG - chr7_3:62019044-62019063 Msa1115000:intron 30.0%
TGGACAGAAATGTTTATGTA+TGG - chr7_3:62019175-62019194 Msa1115000:intron 30.0%
TAGAAGTTGAAAACCTTCTT+TGG + chr7_3:62019363-62019382 None:intergenic 30.0%
CAAAACATTATTGAAACCCT+TGG - chr7_3:62019441-62019460 Msa1115000:intron 30.0%
CACTGACAAATTATAATTGG+AGG + chr7_3:62019757-62019776 None:intergenic 30.0%
!! AGGCACTGACAAATTATAAT+TGG + chr7_3:62019760-62019779 None:intergenic 30.0%
! TGATTTTATAGTGATAAGCC+AGG - chr7_3:62019995-62020014 Msa1115000:CDS 30.0%
AGAGTTAAGTAAAACAAACC+TGG + chr7_3:62020140-62020159 None:intergenic 30.0%
! TTTTCAGCCTGCTAAAAATA+TGG - chr7_3:62020232-62020251 Msa1115000:intron 30.0%
!!! TCATGTTCCATATTTTTAGC+AGG + chr7_3:62020242-62020261 None:intergenic 30.0%
ATTGTTTATGCTTACAGATC+AGG - chr7_3:62020435-62020454 Msa1115000:CDS 30.0%
! AAATCCACCTTCATATTTTC+AGG - chr7_3:62020540-62020559 Msa1115000:exon 30.0%
!! AAATAGCTCTTGTTTGTTGT+CGG + chr7_3:62020849-62020868 None:intergenic 30.0%
AACAAACAAGAGCTATTTGA+TGG - chr7_3:62020851-62020870 Msa1115000:intron 30.0%
TTCTGAGTTATAGTCGAAAT+CGG + chr7_3:62021020-62021039 None:intergenic 30.0%
TTCGACTATAACTCAGAAAA+TGG - chr7_3:62021022-62021041 Msa1115000:intron 30.0%
TCGACTATAACTCAGAAAAT+GGG - chr7_3:62021023-62021042 Msa1115000:intron 30.0%
! GGTAATAACTACTACACTTT+TGG - chr7_3:62021169-62021188 Msa1115000:intron 30.0%
! TTGTAACTTGTAACGTATGT+AGG - chr7_3:62021241-62021260 Msa1115000:intron 30.0%
TTGCAAATTATGTCATGTGT+TGG - chr7_3:62021270-62021289 Msa1115000:intron 30.0%
! ACCAGAACATAAGATTTTTG+AGG - chr7_3:62021411-62021430 Msa1115000:five_prime_UTR 30.0%
! CCAGAACATAAGATTTTTGA+GGG - chr7_3:62021412-62021431 Msa1115000:five_prime_UTR 30.0%
TCTCTAAGCTACAAACGTTA+CGG - chr7_3:62015936-62015955 Msa1115000:three_prime_UTR 35.0%
TACAAACGTTACGGTAAGTT+CGG - chr7_3:62015945-62015964 Msa1115000:three_prime_UTR 35.0%
TTATACCCTTGTGATACAGA+AGG + chr7_3:62016246-62016265 None:intergenic 35.0%
! CTGTATCACAAGGGTATAAT+TGG - chr7_3:62016247-62016266 Msa1115000:CDS 35.0%
AACAATACGGAGCATAAGAT+TGG + chr7_3:62016679-62016698 None:intergenic 35.0%
TCTAATATCTCCGTTGACAA+TGG - chr7_3:62016747-62016766 Msa1115000:intron 35.0%
AACCAAGTTTCCATTGTCAA+CGG + chr7_3:62016760-62016779 None:intergenic 35.0%
!! ACTTACTCTAGGATACCAAT+GGG + chr7_3:62016912-62016931 None:intergenic 35.0%
!! AACTTACTCTAGGATACCAA+TGG + chr7_3:62016913-62016932 None:intergenic 35.0%
AAGCTAGAAGAACTTACTCT+AGG + chr7_3:62016923-62016942 None:intergenic 35.0%
! CTAGCTTTCTACACTTATCA+AGG - chr7_3:62016936-62016955 Msa1115000:CDS 35.0%
! ATTCTAGTTAATCACGGTTG+CGG - chr7_3:62017081-62017100 Msa1115000:intron 35.0%
! AACACGTGAACTTTATTTGC+AGG - chr7_3:62017226-62017245 Msa1115000:CDS 35.0%
! ACACGTGAACTTTATTTGCA+GGG - chr7_3:62017227-62017246 Msa1115000:CDS 35.0%
ATAGAGAGCAAAGATAGTGA+AGG - chr7_3:62017351-62017370 Msa1115000:intron 35.0%
TAGAGAGCAAAGATAGTGAA+GGG - chr7_3:62017352-62017371 Msa1115000:intron 35.0%
CTGTTAAATTCAGTTCCTTC+CGG - chr7_3:62017562-62017581 Msa1115000:CDS 35.0%
GCAAATGGAGTTTATAGCTT+TGG - chr7_3:62017620-62017639 Msa1115000:CDS 35.0%
! TATCCCAATCAAACTCCTTT+TGG - chr7_3:62017663-62017682 Msa1115000:CDS 35.0%
CATACCAAAAGGAGTTTGAT+TGG + chr7_3:62017670-62017689 None:intergenic 35.0%
! ACTCCTTTTGGTATGTGATT+TGG - chr7_3:62017675-62017694 Msa1115000:CDS 35.0%
!! GTTGATGACTTCAAAAGGAT+TGG + chr7_3:62017766-62017785 None:intergenic 35.0%
GGGAAAAATGTCTTACTTGA+CGG + chr7_3:62017793-62017812 None:intergenic 35.0%
CCTAACAACTCTACAGTAAT+GGG + chr7_3:62017813-62017832 None:intergenic 35.0%
TCCTAACAACTCTACAGTAA+TGG + chr7_3:62017814-62017833 None:intergenic 35.0%
CTTATTTCCATAAGCTCTTC+AGG - chr7_3:62017908-62017927 Msa1115000:CDS 35.0%
AAACTATCCTGAAGAGCTTA+TGG + chr7_3:62017918-62017937 None:intergenic 35.0%
AAGCTCTTCAGGATAGTTTA+TGG - chr7_3:62017919-62017938 Msa1115000:CDS 35.0%
TAAGTCAGTTAAACGATCAC+GGG + chr7_3:62018164-62018183 None:intergenic 35.0%
CATTCAACCGTAATACTACA+AGG + chr7_3:62018374-62018393 None:intergenic 35.0%
! ATCTTTTAACCTTGTTCTGC+TGG - chr7_3:62018422-62018441 Msa1115000:intron 35.0%
CATATAAAACCAGCAGAACA+AGG + chr7_3:62018434-62018453 None:intergenic 35.0%
CCAAACATGTCAAGAAAAGA+TGG + chr7_3:62018469-62018488 None:intergenic 35.0%
! CCATCTTTTCTTGACATGTT+TGG - chr7_3:62018466-62018485 Msa1115000:intron 35.0%
! CTTTTCTTGACATGTTTGGT+TGG - chr7_3:62018470-62018489 Msa1115000:intron 35.0%
CTCTCAATAATTACCTCTTC+AGG + chr7_3:62018549-62018568 None:intergenic 35.0%
TACTATGTTGACAGGGATTA+AGG - chr7_3:62018938-62018957 Msa1115000:CDS 35.0%
! AGATGTTTAAGACCTGATGT+CGG + chr7_3:62019008-62019027 None:intergenic 35.0%
GGTCTTAAACATCTAGTAGA+CGG - chr7_3:62019014-62019033 Msa1115000:intron 35.0%
GTCAGAAAAATTACGAGCAA+TGG + chr7_3:62019526-62019545 None:intergenic 35.0%
! GCTCGTAATTTTTCTGACAA+TGG - chr7_3:62019528-62019547 Msa1115000:CDS 35.0%
TGTATGTGTCATAACACTGA+TGG - chr7_3:62019561-62019580 Msa1115000:CDS 35.0%
TGTATGCAACAGACGAAATA+TGG + chr7_3:62019665-62019684 None:intergenic 35.0%
!! GCATACAATTCACTTTTCCT+TGG - chr7_3:62019678-62019697 Msa1115000:intron 35.0%
!! ACCACAATTTTGACCTTCTT+AGG - chr7_3:62020020-62020039 Msa1115000:CDS 35.0%
TCCTAAGAAGGTCAAAATTG+TGG + chr7_3:62020024-62020043 None:intergenic 35.0%
! TTTTGACCTTCTTAGGAAGT+TGG - chr7_3:62020027-62020046 Msa1115000:intron 35.0%
CTGAGAAACATAGACTCAAA+AGG + chr7_3:62020174-62020193 None:intergenic 35.0%
TGGAACATGAACAAATGTAC+TGG - chr7_3:62020252-62020271 Msa1115000:intron 35.0%
AACAAATGTACTGGAGTTGT+TGG - chr7_3:62020261-62020280 Msa1115000:intron 35.0%
TTCGATTCCAGTAACACTAA+AGG - chr7_3:62020590-62020609 Msa1115000:intron 35.0%
! TTACTTGGATTGGACAGAAA+TGG + chr7_3:62020635-62020654 None:intergenic 35.0%
TTGTGATGTCTTACTTGGAT+TGG + chr7_3:62020645-62020664 None:intergenic 35.0%
CAGTGACATACAACATAAAC+TGG + chr7_3:62020668-62020687 None:intergenic 35.0%
CAGTTTATGTTGTATGTCAC+TGG - chr7_3:62020666-62020685 Msa1115000:intron 35.0%
ATTGCTGCAAATGATATACC+AGG + chr7_3:62020764-62020783 None:intergenic 35.0%
GGTATATCATTTGCAGCAAT+AGG - chr7_3:62020764-62020783 Msa1115000:intron 35.0%
!! ATTTGATGGTGAGGTTGTTT+CGG - chr7_3:62020865-62020884 Msa1115000:intron 35.0%
CACTTTCAAAGCAATAGTTG+CGG + chr7_3:62020927-62020946 None:intergenic 35.0%
!! ACTATTGCTTTGAAAGTGAG+AGG - chr7_3:62020929-62020948 Msa1115000:intron 35.0%
! GTTATAGTCGAAATCGGTTT+CGG + chr7_3:62021014-62021033 None:intergenic 35.0%
CATTTATACATGTCCTCTTG+AGG + chr7_3:62021073-62021092 None:intergenic 35.0%
CTCAAGAGGACATGTATAAA+TGG - chr7_3:62021071-62021090 Msa1115000:five_prime_UTR 35.0%
ACAGAACATACTACATCCAT+GGG + chr7_3:62021317-62021336 None:intergenic 35.0%
AACAGAACATACTACATCCA+TGG + chr7_3:62021318-62021337 None:intergenic 35.0%
CCCTCAAAAATCTTATGTTC+TGG + chr7_3:62021415-62021434 None:intergenic 35.0%
AAGTGAAGTACATTCCAGGA+GGG + chr7_3:62015821-62015840 None:intergenic 40.0%
CTAGAAGTGAAGTACATTCC+AGG + chr7_3:62015825-62015844 None:intergenic 40.0%
GTTTGTAGCTTAGAGAGAAG+TGG + chr7_3:62015932-62015951 None:intergenic 40.0%
! TTTTTCTTCAGTGACGGTGA+CGG - chr7_3:62016197-62016216 Msa1115000:CDS 40.0%
ATACGGAGCATAAGATTGGT+TGG + chr7_3:62016675-62016694 None:intergenic 40.0%
! AACACAGTGATTAAGTGCTG+AGG - chr7_3:62016708-62016727 Msa1115000:intron 40.0%
AATGGAAACTTGGTTGTCCA+TGG - chr7_3:62016765-62016784 Msa1115000:intron 40.0%
! GAGTCAGCACAACATTTTCT+GGG + chr7_3:62016812-62016831 None:intergenic 40.0%
! CACGTGAACTTTATTTGCAG+GGG - chr7_3:62017228-62017247 Msa1115000:CDS 40.0%
! ACGTGAACTTTATTTGCAGG+GGG - chr7_3:62017229-62017248 Msa1115000:CDS 40.0%
TCATCCACCATAACTTGAAC+CGG + chr7_3:62017275-62017294 None:intergenic 40.0%
TTGTGGAAAGGATATACCTC+TGG - chr7_3:62017311-62017330 Msa1115000:intron 40.0%
AGAGAGCAAAGATAGTGAAG+GGG - chr7_3:62017353-62017372 Msa1115000:intron 40.0%
CATTGCCTTGTAGAACAGAT+CGG + chr7_3:62017437-62017456 None:intergenic 40.0%
TGCGAAAAACGGTTTAGTGT+AGG - chr7_3:62017508-62017527 Msa1115000:intron 40.0%
GGAGCTGTCATTAATGCAAA+TGG - chr7_3:62017605-62017624 Msa1115000:CDS 40.0%
!!! GGTATGTGATTTGGTTTTGC+AGG - chr7_3:62017684-62017703 Msa1115000:CDS 40.0%
CATGCTGTTGAGACAAATCA+AGG - chr7_3:62017711-62017730 Msa1115000:CDS 40.0%
CATGCATGTAAACCATGTGA+AGG + chr7_3:62017737-62017756 None:intergenic 40.0%
!! GCTTGGTTGATGACTTCAAA+AGG + chr7_3:62017771-62017790 None:intergenic 40.0%
AAATGTCTTACTTGACGGCT+TGG + chr7_3:62017788-62017807 None:intergenic 40.0%
CCCATTACTGTAGAGTTGTT+AGG - chr7_3:62017810-62017829 Msa1115000:CDS 40.0%
AGTACAAGACAGGCTATGTT+TGG + chr7_3:62018127-62018146 None:intergenic 40.0%
AAGTCAGTTAAACGATCACG+GGG + chr7_3:62018163-62018182 None:intergenic 40.0%
ACTACAATGCAAACAAGGTC+AGG + chr7_3:62018197-62018216 None:intergenic 40.0%
GTTTGATCTATTAAGGGCTG+TGG - chr7_3:62018294-62018313 Msa1115000:CDS 40.0%
CCGTAATACTACAAGGAAGA+GGG + chr7_3:62018367-62018386 None:intergenic 40.0%
CCCTCTTCCTTGTAGTATTA+CGG - chr7_3:62018364-62018383 Msa1115000:intron 40.0%
ACCGTAATACTACAAGGAAG+AGG + chr7_3:62018368-62018387 None:intergenic 40.0%
TATACTGACGTAACAGCTGA+AGG - chr7_3:62018511-62018530 Msa1115000:CDS 40.0%
ATGTAACTGCAGTCTATCAG+AGG - chr7_3:62018661-62018680 Msa1115000:intron 40.0%
TGTAACTGCAGTCTATCAGA+GGG - chr7_3:62018662-62018681 Msa1115000:intron 40.0%
TCATCTATGATAAGGAACCG+CGG + chr7_3:62018698-62018717 None:intergenic 40.0%
CGGTTCCTTATCATAGATGA+CGG - chr7_3:62018698-62018717 Msa1115000:intron 40.0%
!! AGGTTTGCTACTATGTTGAC+AGG - chr7_3:62018930-62018949 Msa1115000:intron 40.0%
!! GGTTTGCTACTATGTTGACA+GGG - chr7_3:62018931-62018950 Msa1115000:CDS 40.0%
TCTTTGGATGTACTAGACCA+AGG + chr7_3:62019347-62019366 None:intergenic 40.0%
TGGTCTAGTACATCCAAAGA+AGG - chr7_3:62019347-62019366 Msa1115000:intron 40.0%
CACATGAAGCTAAGTAAGCA+TGG + chr7_3:62019395-62019414 None:intergenic 40.0%
CATGCTTACTTAGCTTCATG+TGG - chr7_3:62019393-62019412 Msa1115000:intron 40.0%
TTAGCTTCATGTGGAGTAGA+TGG - chr7_3:62019402-62019421 Msa1115000:intron 40.0%
AGACGAAATATGGATGGTGT+GGG + chr7_3:62019655-62019674 None:intergenic 40.0%
TGCAACAGACGAAATATGGA+TGG + chr7_3:62019661-62019680 None:intergenic 40.0%
AGAGTTTATGCAGCCAGATT+GGG - chr7_3:62019701-62019720 Msa1115000:intron 40.0%
GTGGTTGTCCAATTTATGTC+AGG - chr7_3:62019882-62019901 Msa1115000:CDS 40.0%
TGGCTGTACCTGACATAAAT+TGG + chr7_3:62019893-62019912 None:intergenic 40.0%
GAAGAACCAACTTCCTAAGA+AGG + chr7_3:62020036-62020055 None:intergenic 40.0%
AACAGAGCTAGTAAGTGTAC+CGG + chr7_3:62020355-62020374 None:intergenic 40.0%
! GTTGATGAGATCAACATCAG+AGG + chr7_3:62020382-62020401 None:intergenic 40.0%
TCCAGTAACACTAAAGGTTC+TGG - chr7_3:62020596-62020615 Msa1115000:intron 40.0%
TCCAGAACCTTTAGTGTTAC+TGG + chr7_3:62020600-62020619 None:intergenic 40.0%
ACTGGTTGTGATGTCTTACT+TGG + chr7_3:62020650-62020669 None:intergenic 40.0%
!! ACAAGAGCTATTTGATGGTG+AGG - chr7_3:62020856-62020875 Msa1115000:intron 40.0%
! TTGTAGGGAGAAGAGTTTTG+TGG - chr7_3:62021148-62021167 Msa1115000:intron 40.0%
TACCATGTAGCTGAGAGATT+GGG - chr7_3:62021192-62021211 Msa1115000:intron 40.0%
TTATGTCATGTGTTGGAGAG+AGG - chr7_3:62021277-62021296 Msa1115000:intron 40.0%
CTTGCTAATTACAGGTTCCT+TGG + chr7_3:62021498-62021517 None:intergenic 40.0%
!! ATAGAAGAAGCATTCCCTCC+TGG - chr7_3:62015804-62015823 Msa1115000:three_prime_UTR 45.0%
GAAGTGAAGTACATTCCAGG+AGG + chr7_3:62015822-62015841 None:intergenic 45.0%
TACCCTTGTGATACAGAAGG+CGG + chr7_3:62016243-62016262 None:intergenic 45.0%
CTCCGTTGACAATGGAAACT+TGG - chr7_3:62016755-62016774 Msa1115000:intron 45.0%
! CTTTCAGTATGGTCTTGCCA+TGG + chr7_3:62016785-62016804 None:intergenic 45.0%
CATGGCAAGACCATACTGAA+AGG - chr7_3:62016783-62016802 Msa1115000:intron 45.0%
!! TTCTGGGACACCTTTCAGTA+TGG + chr7_3:62016796-62016815 None:intergenic 45.0%
! GGAGTCAGCACAACATTTTC+TGG + chr7_3:62016813-62016832 None:intergenic 45.0%
CTGACTCCAGATTCTGGTAA+TGG - chr7_3:62016825-62016844 Msa1115000:intron 45.0%
GCAAGACCATTACCAGAATC+TGG + chr7_3:62016834-62016853 None:intergenic 45.0%
!! TCTGGTAATGGTCTTGCTAC+TGG - chr7_3:62016837-62016856 Msa1115000:CDS 45.0%
CTTGCTACTGGTGCATTCAT+TGG - chr7_3:62016849-62016868 Msa1115000:CDS 45.0%
! AACGTGGAGGCTTTTGGTAT+GGG + chr7_3:62016886-62016905 None:intergenic 45.0%
! AAACGTGGAGGCTTTTGGTA+TGG + chr7_3:62016887-62016906 None:intergenic 45.0%
TACCAATGGGAAAAACGTGG+AGG + chr7_3:62016899-62016918 None:intergenic 45.0%
GGATACCAATGGGAAAAACG+TGG + chr7_3:62016902-62016921 None:intergenic 45.0%
! GTTGCTTCCGGTTCAAGTTA+TGG - chr7_3:62017265-62017284 Msa1115000:intron 45.0%
!! ATGGTGGATGACACAGAGAA+TGG - chr7_3:62017284-62017303 Msa1115000:intron 45.0%
! TGGTGGATGACACAGAGAAT+GGG - chr7_3:62017285-62017304 Msa1115000:intron 45.0%
ACACAGAGAATGGGAACTTG+TGG - chr7_3:62017294-62017313 Msa1115000:intron 45.0%
GAGAATGGGAACTTGTGGAA+AGG - chr7_3:62017299-62017318 Msa1115000:intron 45.0%
AGCATGAATTGAGTCTCCAG+AGG + chr7_3:62017330-62017349 None:intergenic 45.0%
AGCAAAGATAGTGAAGGGGA+AGG - chr7_3:62017357-62017376 Msa1115000:intron 45.0%
GCAAAGATAGTGAAGGGGAA+GGG - chr7_3:62017358-62017377 Msa1115000:intron 45.0%
CAAAGATAGTGAAGGGGAAG+GGG - chr7_3:62017359-62017378 Msa1115000:intron 45.0%
AGCAAGACAGTGTAGACGAT+GGG + chr7_3:62017393-62017412 None:intergenic 45.0%
AAGCAAGACAGTGTAGACGA+TGG + chr7_3:62017394-62017413 None:intergenic 45.0%
CACTGTCTTGCTTCCTCTAT+TGG - chr7_3:62017401-62017420 Msa1115000:CDS 45.0%
GTCTTGCTTCCTCTATTGGA+AGG - chr7_3:62017405-62017424 Msa1115000:CDS 45.0%
CCTTGTAGAACAGATCGGAA+TGG + chr7_3:62017432-62017451 None:intergenic 45.0%
CCATTCCGATCTGTTCTACA+AGG - chr7_3:62017429-62017448 Msa1115000:CDS 45.0%
!! ATCGAGATCTGCTTTGAGAG+TGG - chr7_3:62017468-62017487 Msa1115000:intron 45.0%
!! ACAAATTTTGGCAGACCGGA+AGG + chr7_3:62017580-62017599 None:intergenic 45.0%
TTCCGGTCTGCCAAAATTTG+TGG - chr7_3:62017579-62017598 Msa1115000:CDS 45.0%
TCCGGTCTGCCAAAATTTGT+GGG - chr7_3:62017580-62017599 Msa1115000:CDS 45.0%
GACAAATCAAGGCCTTCACA+TGG - chr7_3:62017722-62017741 Msa1115000:CDS 45.0%
CACATGGTTTACATGCATGC+TGG - chr7_3:62017738-62017757 Msa1115000:CDS 45.0%
TCCATCAAGTGTCTCATGCT+AGG - chr7_3:62018070-62018089 Msa1115000:CDS 45.0%
ACAGTTCAACTACGCTCAAC+CGG + chr7_3:62018100-62018119 None:intergenic 45.0%
! CTAGGGGAAAAGTACAAGAC+AGG + chr7_3:62018137-62018156 None:intergenic 45.0%
! ACATGTTTGGTTGGTGCACA+TGG - chr7_3:62018479-62018498 Msa1115000:intron 45.0%
! CATGTTTGGTTGGTGCACAT+GGG - chr7_3:62018480-62018499 Msa1115000:intron 45.0%
! TCCTTATCATAGATGACGGC+TGG - chr7_3:62018702-62018721 Msa1115000:intron 45.0%
CCTTCTTGTACAACACAGTC+AGG + chr7_3:62018755-62018774 None:intergenic 45.0%
CCTGACTGTGTTGTACAAGA+AGG - chr7_3:62018752-62018771 Msa1115000:CDS 45.0%
TATGTATGGCATGCACTAGC+TGG - chr7_3:62019189-62019208 Msa1115000:intron 45.0%
GCATGCACTAGCTGGTTATT+GGG - chr7_3:62019197-62019216 Msa1115000:intron 45.0%
CATGCACTAGCTGGTTATTG+GGG - chr7_3:62019198-62019217 Msa1115000:intron 45.0%
AAACCAACCCGACATTGTCA+TGG - chr7_3:62019302-62019321 Msa1115000:intron 45.0%
AAGCTGTCCATGACAATGTC+GGG + chr7_3:62019312-62019331 None:intergenic 45.0%
CAAGCTGTCCATGACAATGT+CGG + chr7_3:62019313-62019332 None:intergenic 45.0%
ATGGACAGCTTGTCTGTACA+TGG - chr7_3:62019321-62019340 Msa1115000:intron 45.0%
ATGTGGAGTAGATGGAGTGA+AGG - chr7_3:62019410-62019429 Msa1115000:intron 45.0%
ATTATTGAAACCCTTGGCGC+TGG - chr7_3:62019447-62019466 Msa1115000:intron 45.0%
CAGCTATCATCATGCACTTG+AGG - chr7_3:62019497-62019516 Msa1115000:CDS 45.0%
ACGCGGGTAAAAATCATCAG+AGG + chr7_3:62019622-62019641 None:intergenic 45.0%
AATATGGATGGTGTGGGAAG+CGG + chr7_3:62019649-62019668 None:intergenic 45.0%
CAGACGAAATATGGATGGTG+TGG + chr7_3:62019656-62019675 None:intergenic 45.0%
GAGAGTTTATGCAGCCAGAT+TGG - chr7_3:62019700-62019719 Msa1115000:intron 45.0%
ACATGGAACATGTCCCAATC+TGG + chr7_3:62019717-62019736 None:intergenic 45.0%
GTGACTTCAGAGTCTACATC+CGG - chr7_3:62019826-62019845 Msa1115000:CDS 45.0%
AGGTCAAAATTGTGGTTGCC+TGG + chr7_3:62020016-62020035 None:intergenic 45.0%
! AGGAAGTTGGTTCTTCCTGA+TGG - chr7_3:62020040-62020059 Msa1115000:intron 45.0%
CGACTCACTCTTTGTTGATC+CGG - chr7_3:62020102-62020121 Msa1115000:intron 45.0%
TTGTTGATCCGGCAAGAGAT+AGG - chr7_3:62020113-62020132 Msa1115000:intron 45.0%
GTTGGTGTGTTTAACTGCCA+AGG - chr7_3:62020279-62020298 Msa1115000:intron 45.0%
! TGTTTAACTGCCAAGGTGCT+GGG - chr7_3:62020286-62020305 Msa1115000:intron 45.0%
ACAGAGCTAGTAAGTGTACC+GGG + chr7_3:62020354-62020373 None:intergenic 45.0%
GATCTCATCAACCAAGTAGC+TGG - chr7_3:62020390-62020409 Msa1115000:CDS 45.0%
CTCGCCTGAAAATATGAAGG+TGG + chr7_3:62020547-62020566 None:intergenic 45.0%
!! CACCTTCATATTTTCAGGCG+AGG - chr7_3:62020545-62020564 Msa1115000:exon 45.0%
AGGCGATTCGATTACCGAAA+GGG - chr7_3:62020565-62020584 Msa1115000:intron 45.0%
ATTCAACAGGAAATAGCGCC+TGG - chr7_3:62020743-62020762 Msa1115000:intron 45.0%
ATTTGCAGCAATAGGCCTGA+TGG - chr7_3:62020772-62020791 Msa1115000:intron 45.0%
CTGTGTTGAACATGTCCATC+AGG + chr7_3:62020790-62020809 None:intergenic 45.0%
! CTGATGGACATGTTCAACAC+AGG - chr7_3:62020788-62020807 Msa1115000:intron 45.0%
ATGGACATGTTCAACACAGG+AGG - chr7_3:62020791-62020810 Msa1115000:intron 45.0%
!! TAGCTCTTGTTTGTTGTCGG+AGG + chr7_3:62020846-62020865 None:intergenic 45.0%
CAATAGTTGCGGTTGTCGTT+CGG + chr7_3:62020916-62020935 None:intergenic 45.0%
!! GCTTTGAAAGTGAGAGGAAG+TGG - chr7_3:62020935-62020954 Msa1115000:intron 45.0%
TTGAGGAACTGGGATGTAGA+AGG + chr7_3:62021056-62021075 None:intergenic 45.0%
ACATGTCCTCTTGAGGAACT+GGG + chr7_3:62021066-62021085 None:intergenic 45.0%
TACATGTCCTCTTGAGGAAC+TGG + chr7_3:62021067-62021086 None:intergenic 45.0%
GTACCATGTAGCTGAGAGAT+TGG - chr7_3:62021191-62021210 Msa1115000:intron 45.0%
AGCTGAGAGATTGGGAGAAT+TGG - chr7_3:62021200-62021219 Msa1115000:intron 45.0%
GCTGAGAGATTGGGAGAATT+GGG - chr7_3:62021201-62021220 Msa1115000:intron 45.0%
AGAGATTGGGAGAATTGGGT+TGG - chr7_3:62021205-62021224 Msa1115000:intron 45.0%
!! GTTGTGCTGACTCCAGATTC+TGG - chr7_3:62016819-62016838 Msa1115000:intron 50.0%
! GGGAAAAACGTGGAGGCTTT+TGG + chr7_3:62016892-62016911 None:intergenic 50.0%
! AGCCTCCACGTTTTTCCCAT+TGG - chr7_3:62016894-62016913 Msa1115000:CDS 50.0%
TGCGGCTACAACTGTTACTG+CGG + chr7_3:62016975-62016994 None:intergenic 50.0%
TAGTCTCGATCGCAGTCGTA+GGG - chr7_3:62017110-62017129 Msa1115000:intron 50.0%
! ACTTTATTTGCAGGGGGCTC+CGG - chr7_3:62017235-62017254 Msa1115000:CDS 50.0%
!! TCCGGTTCATGTGTTGCTTC+CGG - chr7_3:62017253-62017272 Msa1115000:CDS 50.0%
ACCGGAAGCAACACATGAAC+CGG + chr7_3:62017257-62017276 None:intergenic 50.0%
! GCTTCCGGTTCAAGTTATGG+TGG - chr7_3:62017268-62017287 Msa1115000:intron 50.0%
CGGAATGGACCTTCCAATAG+AGG + chr7_3:62017417-62017436 None:intergenic 50.0%
!! CCCCACAAATTTTGGCAGAC+CGG + chr7_3:62017584-62017603 None:intergenic 50.0%
CCGGTCTGCCAAAATTTGTG+GGG - chr7_3:62017581-62017600 Msa1115000:CDS 50.0%
GTCTGCCAAAATTTGTGGGG+TGG - chr7_3:62017584-62017603 Msa1115000:CDS 50.0%
! CAGCTCCACCCCACAAATTT+TGG + chr7_3:62017592-62017611 None:intergenic 50.0%
GCCTAGCATGAGACACTTGA+TGG + chr7_3:62018074-62018093 None:intergenic 50.0%
AAACGATCACGGGGACACTA+GGG + chr7_3:62018154-62018173 None:intergenic 50.0%
TAAACGATCACGGGGACACT+AGG + chr7_3:62018155-62018174 None:intergenic 50.0%
!! CGTAACAGCTGAAGGTGTTG+AGG - chr7_3:62018519-62018538 Msa1115000:CDS 50.0%
!! ACAGCTGAAGGTGTTGAGGA+AGG - chr7_3:62018523-62018542 Msa1115000:CDS 50.0%
AACTGCAGTCTATCAGAGGG+AGG - chr7_3:62018665-62018684 Msa1115000:intron 50.0%
TCTATGATAAGGAACCGCGG+AGG + chr7_3:62018695-62018714 None:intergenic 50.0%
GCCAGCCGTCATCTATGATA+AGG + chr7_3:62018706-62018725 None:intergenic 50.0%
GGCATGCACTAGCTGGTTAT+TGG - chr7_3:62019196-62019215 Msa1115000:intron 50.0%
GGAACATTACGACACTGCCT+TGG - chr7_3:62019248-62019267 Msa1115000:intron 50.0%
!! GGTTGGTTTCCTAGTACTCC+TGG + chr7_3:62019291-62019310 None:intergenic 50.0%
TGTCCATGACAATGTCGGGT+TGG + chr7_3:62019308-62019327 None:intergenic 50.0%
AGCTTGTCTGTACATGGCCT+TGG - chr7_3:62019327-62019346 Msa1115000:intron 50.0%
AGCTGCGAGTAAGTGAGACT+CGG + chr7_3:62019482-62019501 None:intergenic 50.0%
CTAAGCAGACTGCTGTTGTG+CGG - chr7_3:62019595-62019614 Msa1115000:intron 50.0%
TAAGCAGACTGCTGTTGTGC+GGG - chr7_3:62019596-62019615 Msa1115000:intron 50.0%
ATATGGATGGTGTGGGAAGC+GGG + chr7_3:62019648-62019667 None:intergenic 50.0%
CTGGCTGCATAAACTCTCCA+AGG + chr7_3:62019698-62019717 None:intergenic 50.0%
GTTCTCCGTGCTCAATTACC+TGG - chr7_3:62020067-62020086 Msa1115000:intron 50.0%
TCCGTGCTCAATTACCTGGA+AGG - chr7_3:62020071-62020090 Msa1115000:intron 50.0%
GCCTTCCAGGTAATTGAGCA+CGG + chr7_3:62020075-62020094 None:intergenic 50.0%
AACCTGGTCCTATCTCTTGC+CGG + chr7_3:62020124-62020143 None:intergenic 50.0%
GTGTTTAACTGCCAAGGTGC+TGG - chr7_3:62020285-62020304 Msa1115000:intron 50.0%
CGCATCCATGATACATCTCC+CGG - chr7_3:62020333-62020352 Msa1115000:intron 50.0%
GTGTACCGGGAGATGTATCA+TGG + chr7_3:62020341-62020360 None:intergenic 50.0%
! ACCAAGTAGCTGGTGCTGAA+TGG - chr7_3:62020400-62020419 Msa1115000:CDS 50.0%
CGCCTCGCCTGAAAATATGA+AGG + chr7_3:62020550-62020569 None:intergenic 50.0%
GAGGCGATTCGATTACCGAA+AGG - chr7_3:62020564-62020583 Msa1115000:intron 50.0%
GGCGATTCGATTACCGAAAG+GGG - chr7_3:62020566-62020585 Msa1115000:intron 50.0%
ACTGGAATCGAAGCCCCTTT+CGG + chr7_3:62020582-62020601 None:intergenic 50.0%
!! GTTTGTTGTCGGAGGCTCTA+TGG + chr7_3:62020838-62020857 None:intergenic 50.0%
GTGAGAGGAAGTGGCAAGTT+TGG - chr7_3:62020944-62020963 Msa1115000:intron 50.0%
CTACATCCCAGTTCCTCAAG+AGG - chr7_3:62021057-62021076 Msa1115000:five_prime_UTR 50.0%
CTCCCAATCTCTCAGCTACA+TGG + chr7_3:62021197-62021216 None:intergenic 50.0%
GGACTGATGTTCTTCTCCCA+TGG - chr7_3:62021298-62021317 Msa1115000:intron 50.0%
GAAGGCGGCGCTTGATACAA+GGG + chr7_3:62016228-62016247 None:intergenic 55.0%
AGAAGGCGGCGCTTGATACA+AGG + chr7_3:62016229-62016248 None:intergenic 55.0%
CGCCGCCTTCTGTATCACAA+GGG - chr7_3:62016238-62016257 Msa1115000:CDS 55.0%
GTAGTCTCGATCGCAGTCGT+AGG - chr7_3:62017109-62017128 Msa1115000:intron 55.0%
TCTAGTCGACGAACCCAGCT+GGG - chr7_3:62018040-62018059 Msa1115000:CDS 55.0%
GATGGATAGTGTCCCCAGCT+GGG + chr7_3:62018056-62018075 None:intergenic 55.0%
! TGATGGATAGTGTCCCCAGC+TGG + chr7_3:62018057-62018076 None:intergenic 55.0%
GTGTCTCATGCTAGGCTAGC+CGG - chr7_3:62018078-62018097 Msa1115000:CDS 55.0%
AACGATCACGGGGACACTAG+GGG + chr7_3:62018153-62018172 None:intergenic 55.0%
GTGTTGAGGAAGGCCTGAAG+AGG - chr7_3:62018533-62018552 Msa1115000:CDS 55.0%
GAGCACAACGAACCGACATC+AGG - chr7_3:62018993-62019012 Msa1115000:intron 55.0%
GCACTAGCTGGTTATTGGGG+CGG - chr7_3:62019201-62019220 Msa1115000:intron 55.0%
CGACTGCACTGGATATGCCA+AGG + chr7_3:62019268-62019287 None:intergenic 55.0%
GCACGGAGAACAGAACCATC+AGG + chr7_3:62020058-62020077 None:intergenic 55.0%
ACAAAGAGTGAGTCGCGCGT+AGG + chr7_3:62020097-62020116 None:intergenic 55.0%
ATCCGGCAAGAGATAGGACC+AGG - chr7_3:62020119-62020138 Msa1115000:intron 55.0%
!! TTAACTGCCAAGGTGCTGGG+TGG - chr7_3:62020289-62020308 Msa1115000:intron 55.0%
GCCATTCAGCACCAGCTACT+TGG + chr7_3:62020404-62020423 None:intergenic 55.0%
! GTAGCTGGTGCTGAATGGCA+TGG - chr7_3:62020405-62020424 Msa1115000:CDS 55.0%
CACAGGAGGAGCTGTAGAAG+AGG - chr7_3:62020805-62020824 Msa1115000:intron 55.0%
GTTGCGGTTGTCGTTCGGTT+AGG + chr7_3:62020911-62020930 None:intergenic 55.0%
CCATCTACCGCACACTTCAG+CGG + chr7_3:62020989-62021008 None:intergenic 55.0%
GCGCCGCCTTCTGTATCACA+AGG - chr7_3:62016237-62016256 Msa1115000:CDS 60.0%
GTCTAGTCGACGAACCCAGC+TGG - chr7_3:62018039-62018058 Msa1115000:CDS 60.0%
CTAGTCGACGAACCCAGCTG+GGG - chr7_3:62018041-62018060 Msa1115000:CDS 60.0%
TGTTCCATGCCAGTCGCTGC+TGG + chr7_3:62019234-62019253 None:intergenic 60.0%
GCATATCCAGTGCAGTCGCC+AGG - chr7_3:62019270-62019289 Msa1115000:intron 60.0%
AGTACTCCTGGCGACTGCAC+TGG + chr7_3:62019279-62019298 None:intergenic 60.0%
!! GTGCAGTCGCCAGGAGTACT+AGG - chr7_3:62019279-62019298 Msa1115000:intron 60.0%
! GAAACCCTTGGCGCTGGACA+TGG - chr7_3:62019453-62019472 Msa1115000:intron 60.0%
GCGGCATGATACTCTGCTGC+CGG + chr7_3:62019848-62019867 None:intergenic 60.0%
CCGCTGAAGTGTGCGGTAGA+TGG - chr7_3:62020986-62021005 Msa1115000:intron 60.0%
! CAGAGGGAGGTACACCTCCG+CGG - chr7_3:62018678-62018697 Msa1115000:intron 65.0%
GGAGTGAAGCCAGCAGCGAC+TGG - chr7_3:62019222-62019241 Msa1115000:intron 65.0%
GAAGCCAGCAGCGACTGGCA+TGG - chr7_3:62019227-62019246 Msa1115000:intron 65.0%
! ACCCTTGGCGCTGGACATGG+TGG - chr7_3:62019456-62019475 Msa1115000:intron 65.0%
GCCACCATGTCCAGCGCCAA+GGG + chr7_3:62019460-62019479 None:intergenic 65.0%
TGTGGGAAGCGGGATCACGC+GGG + chr7_3:62019638-62019657 None:intergenic 65.0%
GTGTGGGAAGCGGGATCACG+CGG + chr7_3:62019639-62019658 None:intergenic 65.0%
CATGCCGCAGCTCGCGCAAT+CGG - chr7_3:62019860-62019879 Msa1115000:CDS 65.0%
! ACCACCGATTGCGCGAGCTG+CGG + chr7_3:62019867-62019886 None:intergenic 65.0%
CCTTGCACCACCCAGCACCT+TGG + chr7_3:62020299-62020318 None:intergenic 65.0%
!! CCAAGGTGCTGGGTGGTGCA+AGG - chr7_3:62020296-62020315 Msa1115000:intron 65.0%
ACACTTCAGCGGACGCTGGG+AGG + chr7_3:62020978-62020997 None:intergenic 65.0%
CGCACACTTCAGCGGACGCT+GGG + chr7_3:62020981-62021000 None:intergenic 65.0%
CCAGCGTCCGCTGAAGTGTG+CGG - chr7_3:62020979-62020998 Msa1115000:intron 65.0%
GGCCACCATGTCCAGCGCCA+AGG + chr7_3:62019461-62019480 None:intergenic 70.0%
GAGTCGCGCGTAGGCCTTCC+AGG + chr7_3:62020088-62020107 None:intergenic 70.0%
CCGCACACTTCAGCGGACGC+TGG + chr7_3:62020982-62021001 None:intergenic 70.0%
GCCGCAGCTCGCGCAATCGG+TGG - chr7_3:62019863-62019882 Msa1115000:CDS 75.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 62015722 62021566 62015722 ID=Msa1115000;Name=Msa1115000
chr7_3 mRNA 62015722 62021566 62015722 ID=Msa1115000-mRNA-1;Parent=Msa1115000;Name=Msa1115000-mRNA-1;_AED=0.13;_eAED=0.13;_QI=330|1|1|1|0.85|0.8|15|452|775
chr7_3 exon 62015722 62016536 62015722 ID=Msa1115000-mRNA-1:exon:14325;Parent=Msa1115000-mRNA-1
chr7_3 exon 62016638 62016726 62016638 ID=Msa1115000-mRNA-1:exon:14324;Parent=Msa1115000-mRNA-1
chr7_3 exon 62016832 62017049 62016832 ID=Msa1115000-mRNA-1:exon:14323;Parent=Msa1115000-mRNA-1
chr7_3 exon 62017148 62017282 62017148 ID=Msa1115000-mRNA-1:exon:14322;Parent=Msa1115000-mRNA-1
chr7_3 exon 62017385 62017452 62017385 ID=Msa1115000-mRNA-1:exon:14321;Parent=Msa1115000-mRNA-1
chr7_3 exon 62017554 62018106 62017554 ID=Msa1115000-mRNA-1:exon:14320;Parent=Msa1115000-mRNA-1
chr7_3 exon 62018228 62018356 62018228 ID=Msa1115000-mRNA-1:exon:14319;Parent=Msa1115000-mRNA-1
chr7_3 exon 62018508 62018615 62018508 ID=Msa1115000-mRNA-1:exon:14318;Parent=Msa1115000-mRNA-1
chr7_3 exon 62018734 62018825 62018734 ID=Msa1115000-mRNA-1:exon:14317;Parent=Msa1115000-mRNA-1
chr7_3 exon 62018931 62018979 62018931 ID=Msa1115000-mRNA-1:exon:14316;Parent=Msa1115000-mRNA-1
chr7_3 exon 62019492 62019582 62019492 ID=Msa1115000-mRNA-1:exon:14315;Parent=Msa1115000-mRNA-1
chr7_3 exon 62019799 62020040 62019799 ID=Msa1115000-mRNA-1:exon:14314;Parent=Msa1115000-mRNA-1
chr7_3 exon 62020363 62020573 62020363 ID=Msa1115000-mRNA-1:exon:14313;Parent=Msa1115000-mRNA-1
chr7_3 exon 62021029 62021102 62021029 ID=Msa1115000-mRNA-1:exon:14312;Parent=Msa1115000-mRNA-1
chr7_3 exon 62021331 62021566 62021331 ID=Msa1115000-mRNA-1:exon:14311;Parent=Msa1115000-mRNA-1
chr7_3 five_prime_UTR 62021331 62021566 62021331 ID=Msa1115000-mRNA-1:five_prime_utr;Parent=Msa1115000-mRNA-1
chr7_3 five_prime_UTR 62021029 62021102 62021029 ID=Msa1115000-mRNA-1:five_prime_utr;Parent=Msa1115000-mRNA-1
chr7_3 five_prime_UTR 62020554 62020573 62020554 ID=Msa1115000-mRNA-1:five_prime_utr;Parent=Msa1115000-mRNA-1
chr7_3 CDS 62020363 62020553 62020363 ID=Msa1115000-mRNA-1:cds;Parent=Msa1115000-mRNA-1
chr7_3 CDS 62019799 62020040 62019799 ID=Msa1115000-mRNA-1:cds;Parent=Msa1115000-mRNA-1
chr7_3 CDS 62019492 62019582 62019492 ID=Msa1115000-mRNA-1:cds;Parent=Msa1115000-mRNA-1
chr7_3 CDS 62018931 62018979 62018931 ID=Msa1115000-mRNA-1:cds;Parent=Msa1115000-mRNA-1
chr7_3 CDS 62018734 62018825 62018734 ID=Msa1115000-mRNA-1:cds;Parent=Msa1115000-mRNA-1
chr7_3 CDS 62018508 62018615 62018508 ID=Msa1115000-mRNA-1:cds;Parent=Msa1115000-mRNA-1
chr7_3 CDS 62018228 62018356 62018228 ID=Msa1115000-mRNA-1:cds;Parent=Msa1115000-mRNA-1
chr7_3 CDS 62017554 62018106 62017554 ID=Msa1115000-mRNA-1:cds;Parent=Msa1115000-mRNA-1
chr7_3 CDS 62017385 62017452 62017385 ID=Msa1115000-mRNA-1:cds;Parent=Msa1115000-mRNA-1
chr7_3 CDS 62017148 62017282 62017148 ID=Msa1115000-mRNA-1:cds;Parent=Msa1115000-mRNA-1
chr7_3 CDS 62016832 62017049 62016832 ID=Msa1115000-mRNA-1:cds;Parent=Msa1115000-mRNA-1
chr7_3 CDS 62016638 62016726 62016638 ID=Msa1115000-mRNA-1:cds;Parent=Msa1115000-mRNA-1
chr7_3 CDS 62016174 62016536 62016174 ID=Msa1115000-mRNA-1:cds;Parent=Msa1115000-mRNA-1
chr7_3 three_prime_UTR 62015722 62016173 62015722 ID=Msa1115000-mRNA-1:three_prime_utr;Parent=Msa1115000-mRNA-1
Gene Sequence

>Msa1115000

ATGACTATCACATCTAATATCTCCGTTGACAATGGAAACTTGGTTGTCCATGGCAAGACCATACTGAAAGGTGTCCCAGAAAATGTTGTGCTGACTCCAGATTCTGGTAATGGTCTTGCTACTGGTGCATTCATTGGTGCTGCAGCTTCCCATACCAAAAGCCTCCACGTTTTTCCCATTGGTATCCTAGAGGGGCTCCGGTTCATGTGTTGCTTCCGGTTCAAGTTATGGTGGATGACACAGAGAATGGGAACTTGTGGAAAGGATATACCTCTGGAGACTCAATTCATGCTAATAGAGAGCAAAGATAGTGAAGGGGAAGGGGAAAATTCTCCCATCGTCTACACTGTCTTGCTTCCTCTATTGGAAGGTCCATTCCGATCTGTTCTACAAGGCAATGAGAAAAGCGAGATCGAGATCTGCTTTGAGAGTGGTGATCATGCTGTTGAGACAAATCAAGGCCTTCACATGGTTTACATGCATGCTGGCACCAATCCTTTTGAAGTCATCAACCAAGCCGTCAAGGCTGTGGAAAAGCACATGCAAACATTTCATCATCGTGAGAAGAAAAGACTGCCATCTTTTCTTGACATGTTTGGTTGGTGCACATGGGATGCTTTCTATACTGACGTAACAGCTGAAGGTGTTGAGGAAGGCCTGAAGAGTCTATCAGAGGGAGGTACACCTCCGCGGTTCCTTATCATAGATGACGGCTGGCAACAGATTGAAACTAAAGCAAAGGATCCTGACTGTGTTGTACAAGAAGGAGCACAGTTTGCTACTATGTTGACAGGGATTAAGGAGAATGCTAAATTTCAAAAGAGTAAGAATGGAGAGCACAACGAACCGACATCAGGTCTTAAACATCTAGTAGACGGAGTGAAGAAACATCACAATGTCAAAAATGTTTATGTATGGCATGCACTAGCTGGTTATTGGGGCGGAGTGAAGCCAGCAGCGACTGGCATGGAACATTACGACACTGCCTTGGCATATCCAGTGCAGTCGCCAGGAGTACTAGGAAACCAACCCGACATTGTCATGGACAGCTTGTCTGTACATGGCCTTGGTCTAGTACATCCAAAGAAGGTTTTCAACTTCTATGATGAGCTCCATGCTTACTTAGCTTCATGTGGAGTAGATGGAGTGAAGGTAGATGTGCAAAACATTATTGAAACCCTTGGCGCTGGACATGGTGGCCGAGTCTCACTTACTCGCAGCTATCATCATGCACTTGAGGCTTCCATTGCTCGTAATTTTTCTGACAATGGATGCATCGCATGTATGTGTCATAACACTGATGGACTTTACAGTGCTAAGCAGACTGCTGTTGTGCGGGCCTCTGATGATTTTTACCCGCGTGATCCCGCTTCCCACACCATCCATATTTCGTCTGTTGCATACAATTCACTTTTCCTTGGAGAGTTTATGCAGCCAGATTGGGACATGTTCCATAGTCTACATCCGGCAGCAGAGTATCATGCCGCAGCTCGCGCAATCGGTGGTTGTCCAATTTATGTCAGTGATAAGCCAGGCAACCACAATTTTGACCTTCTTAGGAAGTTGGTTCTTCCTGATGGTTCTGTTCTCCGTGCTCAATTACCTGGAAGGCCTACGCGCGACTCACTCTTTGTTGATCCGGCAAGAGATAGGACCAGCCTGCTAAAAATATGGAACATGAACAAATGTACTGGAGTTGTTGGTGTGTTTAACTGCCAAGGTGCTGGGTGGTGCAAGGTAGAGAAGAAAACTCGCATCCATGATACATCTCCCGGTACACTTACTAGCTCTGTTTGTGCCTCTGATGTTGATCTCATCAACCAAGTAGCTGGTGCTGAATGGCATGGAGAGACTATTGTTTATGCTTACAGATCAGGCGAGGCGATTCGATTACCGAAAGGGGCTTCGATTCCAGTAACACTAAAGGTTCTGGAGTTTGAACTTTTCCATTTCTGTCCAATCCAAGAAATAGCGCCTGGTATATCATTTGCAGCAATAGGCCTGATGGACATGTTCAACACAGGAGGAGCTGTAGAAGAGGTTGAAATCCATAGAGCCTCCGACAACAAACAAGAGCTATTTGATGGTGAGGTTGTTTCGGAACTGACTACTTCGCTCAGTCCTAACCGAACGACAACCGCAACTATTGCTTTGAAAGTGAGAGGAAGTGGCAAGTTTGGAGTTTACTCCTCCCAGCGTCCGCTGAAGTGTGCGGTAGATGGCACCGAAACCGATTTCGACTATAACTCAGAAAATGGGTTGACAACCTTCTACATCCCAGTTCCTCAAGAGGACATGTATAAATGGTTAATAGAGATCCAAGTTTAA
Protein sequence

>Msa1115000

MTITSNISVDNGNLVVHGKTILKGVPENVVLTPDSGNGLATGAFIGAAASHTKSLHVFPIGILEGLRFMCCFRFKLWWMTQRMGTCGKDIPLETQFMLIESKDSEGEGENSPIVYTVLLPLLEGPFRSVLQGNEKSEIEICFESGDHAVETNQGLHMVYMHAGTNPFEVINQAVKAVEKHMQTFHHREKKRLPSFLDMFGWCTWDAFYTDVTAEGVEEGLKSLSEGGTPPRFLIIDDGWQQIETKAKDPDCVVQEGAQFATMLTGIKENAKFQKSKNGEHNEPTSGLKHLVDGVKKHHNVKNVYVWHALAGYWGGVKPAATGMEHYDTALAYPVQSPGVLGNQPDIVMDSLSVHGLGLVHPKKVFNFYDELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHHALEASIARNFSDNGCIACMCHNTDGLYSAKQTAVVRASDDFYPRDPASHTIHISSVAYNSLFLGEFMQPDWDMFHSLHPAAEYHAAARAIGGCPIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDSLFVDPARDRTSLLKIWNMNKCTGVVGVFNCQGAGWCKVEKKTRIHDTSPGTLTSSVCASDVDLINQVAGAEWHGETIVYAYRSGEAIRLPKGASIPVTLKVLEFELFHFCPIQEIAPGISFAAIGLMDMFNTGGAVEEVEIHRASDNKQELFDGEVVSELTTSLSPNRTTTATIALKVRGSGKFGVYSSQRPLKCAVDGTETDFDYNSENGLTTFYIPVPQEDMYKWLIEIQV*