AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1411820


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1411820 MtrunA17_Chr3g0127891 94.862 506 25 1 1 505 1 506 0.0 966
Msa1411820 MtrunA17_Chr2g0294671 25.641 312 181 11 186 490 215 482 4.00e-21 96.3
Msa1411820 MtrunA17_Chr4g0043941 25.379 264 161 5 228 490 90 318 7.63e-15 75.9
Msa1411820 MtrunA17_Chr4g0034981 21.867 375 237 12 140 468 200 564 1.18e-14 76.6
Msa1411820 MtrunA17_Chr4g0067671 22.300 287 198 9 218 490 75 350 1.68e-13 72.0
Msa1411820 MtrunA17_Chr2g0296121 23.390 295 197 8 212 490 153 434 3.69e-12 68.6
Msa1411820 MtrunA17_Chr6g0448821 22.360 322 217 12 188 492 53 358 4.18e-12 67.8
Msa1411820 MtrunA17_Chr1g0212691 22.222 351 194 10 216 490 103 450 5.77e-12 67.8
Msa1411820 MtrunA17_Chr5g0428941 23.278 421 268 16 80 490 107 482 1.76e-11 66.6
Msa1411820 MtrunA17_Chr8g0335121 29.412 136 89 2 363 493 407 540 3.65e-11 65.5
Msa1411820 MtrunA17_Chr5g0445491 24.809 262 152 7 224 474 230 457 4.01e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1411820 AT5G54180.1 48.413 504 232 5 1 491 1 489 5.75e-155 451
Msa1411820 AT4G14605.2 28.000 250 164 10 247 490 228 467 8.08e-17 83.6
Msa1411820 AT4G14605.1 28.000 250 164 10 247 490 228 467 8.08e-17 83.6
Msa1411820 AT4G38160.4 26.923 260 172 8 225 470 46 301 2.83e-15 77.4
Msa1411820 AT4G38160.1 26.923 260 172 8 225 470 46 301 2.83e-15 77.4
Msa1411820 AT4G38160.3 26.923 260 172 8 225 470 46 301 4.51e-15 77.4
Msa1411820 AT4G38160.2 26.923 260 172 8 225 470 46 301 4.76e-15 77.0
Msa1411820 AT2G36000.1 29.545 220 135 8 267 473 81 293 1.01e-14 75.9
Msa1411820 AT2G36000.2 29.545 220 135 8 267 473 81 293 1.72e-14 75.1
Msa1411820 AT2G03050.1 27.273 198 132 5 300 490 76 268 8.08e-13 69.3
Msa1411820 AT2G03050.2 27.273 198 132 5 300 490 77 269 8.80e-13 69.3
Msa1411820 AT5G07900.1 25.000 280 188 8 235 503 121 389 1.31e-12 70.1
Msa1411820 AT2G44020.1 23.020 404 212 13 180 490 58 455 7.71e-12 68.2
Msa1411820 AT2G21710.1 22.517 302 218 7 177 468 276 571 3.93e-11 65.9
Msa1411820 AT1G78930.1 23.952 334 233 11 169 492 254 576 6.67e-11 65.1

Find 111 sgRNAs with CRISPR-Local

Find 266 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTTTATTCATTATGTTTC+AGG 0.139598 tig0023844:+14083 Msa1411820:three_prime_UTR
GTGAGCCTATTCTTGAACTA+TGG 0.173687 tig0023844:+13694 Msa1411820:CDS
TAAGATTGTGTTGGTGTTTC+CGG 0.175674 tig0023844:+13420 Msa1411820:CDS
ATGAAATAAAGAAGGGTTTA+AGG 0.183717 tig0023844:+13899 Msa1411820:CDS
TCCTTGAGAAATTGTATTCT+AGG 0.235507 tig0023844:-13478 None:intergenic
TGAAACGTTGTTATAGAAAA+AGG 0.303498 tig0023844:-12452 None:intergenic
TCAGTAAGAACTCTAATTCT+AGG 0.304339 tig0023844:-13259 None:intergenic
TAAAATATGAATTGAAATAA+AGG 0.313655 tig0023844:+14001 Msa1411820:CDS
GTCTCTTTATTTGAAGAATT+CGG 0.325435 tig0023844:+12749 Msa1411820:CDS
ACACTATAATTCAAGATAAT+AGG 0.335022 tig0023844:-13331 None:intergenic
GTATTGGGAAAGTGCTGAAT+AGG 0.369869 tig0023844:+13305 Msa1411820:CDS
TCGTGACATTCAAGAGTTAC+TGG 0.371309 tig0023844:+13825 Msa1411820:CDS
AAGATGAGGGGAAAGGGTTG+AGG 0.381106 tig0023844:-12510 None:intergenic
TGCAAAGCGCTGTGCAATCC+TGG 0.383044 tig0023844:-12371 None:intergenic
CCGAATGACACATTGACATT+GGG 0.383638 tig0023844:-12641 None:intergenic
ATAGATTTCTTAAAACCCTT+TGG 0.390276 tig0023844:+13172 Msa1411820:CDS
TCAAGATTGGGTATAAATAT+AGG 0.394877 tig0023844:+13605 Msa1411820:CDS
GTTCGATTGCTTGTTGATAG+TGG 0.398687 tig0023844:+13058 Msa1411820:CDS
ATGTGGATAATTTGATGGAT+AGG 0.399161 tig0023844:-12477 None:intergenic
GGAAAGGGTTGAGGGTGAAC+GGG 0.401945 tig0023844:-12501 None:intergenic
AAGGTGCTACTTTGCAGAAA+TGG 0.403414 tig0023844:+12406 Msa1411820:exon
GTTGTTTGGTGGTGGTGATT+TGG 0.403770 tig0023844:-12561 None:intergenic
CGAACCTTGCGTATAAGCTT+GGG 0.418895 tig0023844:+13575 Msa1411820:CDS
AAAACTAATGTACAAGGAAA+AGG 0.421287 tig0023844:-14044 None:intergenic
TTCAGTGACTAAGTGATTGA+TGG 0.422092 tig0023844:-12891 None:intergenic
TGTTTATTCATTATGTTTCA+GGG 0.424002 tig0023844:+14084 Msa1411820:three_prime_UTR
AGGGTTGAGTTTGAAGATGA+GGG 0.427156 tig0023844:-12523 None:intergenic
GCGAACCTTGCGTATAAGCT+TGG 0.427203 tig0023844:+13574 Msa1411820:CDS
CGGGAATGTGGATAATTTGA+TGG 0.434109 tig0023844:-12482 None:intergenic
TGTACAAGGAAAAGGGAAAC+AGG 0.435196 tig0023844:-14036 None:intergenic
GTGGAGATGAGGATAGTATT+GGG 0.438920 tig0023844:+13290 Msa1411820:CDS
TGAACTTAACTCTATTCCAT+TGG 0.447457 tig0023844:+12814 Msa1411820:CDS
TAAATATTTGTTGATCATCA+AGG 0.451246 tig0023844:-13399 None:intergenic
AAAACCCATAGTTCAAGAAT+AGG 0.452781 tig0023844:-13699 None:intergenic
GGTGGAGATGAGGATAGTAT+TGG 0.457275 tig0023844:+13289 Msa1411820:CDS
AGTTTGAAGATGAGGGGAAA+GGG 0.457788 tig0023844:-12516 None:intergenic
GGGAAAGGGTTGAGGGTGAA+CGG 0.459402 tig0023844:-12502 None:intergenic
AGATGAGGGGAAAGGGTTGA+GGG 0.459590 tig0023844:-12509 None:intergenic
ACATGTACAATCTTATCAAC+AGG 0.460797 tig0023844:-13085 None:intergenic
TGAAATAAAGAAGGGTTTAA+GGG 0.465888 tig0023844:+13900 Msa1411820:CDS
TGTCGAAGGCGATTTGTCAT+AGG 0.466844 tig0023844:+13125 Msa1411820:CDS
CCCAATGTCAATGTGTCATT+CGG 0.467017 tig0023844:+12641 Msa1411820:CDS
CAGTTTCCTCTCTCTGCTAC+TGG 0.469436 tig0023844:-13452 None:intergenic
GAAGATGGAGTACTTGATAG+AGG 0.472033 tig0023844:+13795 Msa1411820:CDS
TGAGCCTATTCTTGAACTAT+GGG 0.472998 tig0023844:+13695 Msa1411820:CDS
ATGAATAAACAAAATAACTA+GGG 0.473404 tig0023844:-14072 None:intergenic
TTTATCTGGGTTTCCTCAGA+AGG 0.474030 tig0023844:+13036 Msa1411820:CDS
TGGTGGTGATTTGGCGAGGA+AGG 0.485907 tig0023844:-12552 None:intergenic
GATTTCTTAAAACCCTTTGG+TGG 0.492456 tig0023844:+13175 Msa1411820:CDS
AAACTAATGTACAAGGAAAA+GGG 0.493790 tig0023844:-14043 None:intergenic
GCATAGGTATGAAATAAAGA+AGG 0.498746 tig0023844:+13891 Msa1411820:CDS
ACAAATATTTAAGATTGTGT+TGG 0.499280 tig0023844:+13411 Msa1411820:CDS
ACCGAATGACACATTGACAT+TGG 0.500846 tig0023844:-12642 None:intergenic
CTTTGCAGTTTGACTAGAGA+AGG 0.502584 tig0023844:+12387 Msa1411820:five_prime_UTR
GTTGAGGGTGAACGGGAATG+TGG 0.504353 tig0023844:-12494 None:intergenic
AAATCACAATTGAGAATCAC+AGG 0.505679 tig0023844:-13220 None:intergenic
AGAGTTCTTACTGAGTTAAG+TGG 0.507100 tig0023844:+13268 Msa1411820:CDS
TACAATTTCTCAAGGAATGT+GGG 0.508650 tig0023844:+13485 Msa1411820:CDS
TGATTTGGCGAGGAAGGAAA+AGG 0.510218 tig0023844:-12546 None:intergenic
CATAGGTATGAAATAAAGAA+GGG 0.511589 tig0023844:+13892 Msa1411820:CDS
TGGGTATAAATATAGGACTA+AGG 0.519559 tig0023844:+13612 Msa1411820:CDS
AATGGAATAGAGTTAAGTTC+AGG 0.520347 tig0023844:-12812 None:intergenic
TGTGGATAATTTGATGGATA+GGG 0.522628 tig0023844:-12476 None:intergenic
GAGGGTTGAGTTTGAAGATG+AGG 0.524128 tig0023844:-12524 None:intergenic
GAGTTTGAAGATGAGGGGAA+AGG 0.528061 tig0023844:-12517 None:intergenic
AATGAATAAACAAAATAACT+AGG 0.529064 tig0023844:-14073 None:intergenic
AGCTTGTATCCAAGAAATGC+AGG 0.531555 tig0023844:-13853 None:intergenic
GTTTCAAGTGAGAACTTCAC+TGG 0.532193 tig0023844:+13955 Msa1411820:CDS
CTGCTACTGGTAAAGATAGC+CGG 0.532788 tig0023844:-13439 None:intergenic
ACTACAGCGGCAACGGATGG+AGG 0.545742 tig0023844:-12609 None:intergenic
GAAATAAAGAAGGGTTTAAG+GGG 0.547648 tig0023844:+13901 Msa1411820:CDS
ATACAATTTCTCAAGGAATG+TGG 0.550137 tig0023844:+13484 Msa1411820:CDS
ATCAAATGAATACCACCAAA+GGG 0.550277 tig0023844:-13187 None:intergenic
GGGTTGAGTTTGAAGATGAG+GGG 0.553523 tig0023844:-12522 None:intergenic
ATGGAATAGAGTTAAGTTCA+GGG 0.553719 tig0023844:-12811 None:intergenic
GCTTATACGCAAGGTTCGCA+CGG 0.556457 tig0023844:-13570 None:intergenic
CCATGAGTAAAATAATGCTA+TGG 0.558259 tig0023844:-12348 None:intergenic
CGATCACGCAATGAATCCAA+TGG 0.559201 tig0023844:-12830 None:intergenic
TTTGGCGAGGAAGGAAAAGG+AGG 0.566174 tig0023844:-12543 None:intergenic
TAACAAAGTAAATTTGTCGA+AGG 0.566339 tig0023844:+13111 Msa1411820:CDS
TATTATCTTGAATTATAGTG+TGG 0.569717 tig0023844:+13333 Msa1411820:CDS
AATCAAATGAATACCACCAA+AGG 0.571779 tig0023844:-13188 None:intergenic
ACTACTACAGCGGCAACGGA+TGG 0.574305 tig0023844:-12612 None:intergenic
TTGGCGAGGAAGGAAAAGGA+GGG 0.574628 tig0023844:-12542 None:intergenic
TTATAGTGTGGAACATCTTG+AGG 0.578549 tig0023844:+13345 Msa1411820:CDS
ACAAGCAATCGAACCTTCTG+AGG 0.581418 tig0023844:-13049 None:intergenic
CTCCATCTTCTTCTCTAGAG+AGG 0.583295 tig0023844:-13782 None:intergenic
TGAGTTAAGTGGTGGAGATG+AGG 0.587051 tig0023844:+13279 Msa1411820:CDS
TGATTATACTGCAGTATCTG+AGG 0.588367 tig0023844:-13757 None:intergenic
TCCTAGAATACAATTTCTCA+AGG 0.589047 tig0023844:+13477 Msa1411820:CDS
TGGAGGGTCGAAAATGAAAA+CGG 0.589100 tig0023844:-12592 None:intergenic
GTTCTTACTGAGTTAAGTGG+TGG 0.590069 tig0023844:+13271 Msa1411820:CDS
TTGAGAAATCAAAGCTGAAG+CGG 0.593691 tig0023844:+12987 Msa1411820:CDS
CTACAGCGGCAACGGATGGA+GGG 0.596461 tig0023844:-12608 None:intergenic
AGGAACATATAAAGTTTCTG+AGG 0.600236 tig0023844:+13365 Msa1411820:CDS
GGCAGCAAAACTAATGTACA+AGG 0.603676 tig0023844:-14050 None:intergenic
CTGTGAGAATATGCAGAAGA+TGG 0.604021 tig0023844:+13672 Msa1411820:CDS
TGCCTCTCTAGAGAAGAAGA+TGG 0.604406 tig0023844:+13780 Msa1411820:CDS
AAAACCCAAGCTTATACGCA+AGG 0.605961 tig0023844:-13579 None:intergenic
AGTAACTACTACAGCGGCAA+CGG 0.606334 tig0023844:-12616 None:intergenic
CGAATGACACATTGACATTG+GGG 0.607372 tig0023844:-12640 None:intergenic
TTGATGACAGAATTAAGCAT+AGG 0.632416 tig0023844:+13875 Msa1411820:CDS
TCTTTACCAGTAGCAGAGAG+AGG 0.644660 tig0023844:+13446 Msa1411820:CDS
AAATAAAGAAGGGTTTAAGG+GGG 0.657424 tig0023844:+13902 Msa1411820:CDS
TGAATAAACAAAATAACTAG+GGG 0.663254 tig0023844:-14071 None:intergenic
TGGAATAGAGTTAAGTTCAG+GGG 0.673962 tig0023844:-12810 None:intergenic
AATAAAGAAGGGTTTAAGGG+GGG 0.680018 tig0023844:+13903 Msa1411820:CDS
TAGGACTAAGGAGTTAGCAG+TGG 0.681301 tig0023844:+13624 Msa1411820:CDS
TTGGTGGTGGTGATTTGGCG+AGG 0.684582 tig0023844:-12556 None:intergenic
AATCACAATTGAGAATCACA+GGG 0.722130 tig0023844:-13219 None:intergenic
GAATGACACATTGACATTGG+GGG 0.758405 tig0023844:-12639 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATATGAATTGAAATAA+AGG + tig0023844:14001-14020 Msa1411820:CDS 10.0%
!! TAAAATATGAATTGAAATAA+AGG + tig0023844:14001-14020 Msa1411820:CDS 10.0%
!! ATGAATAAACAAAATAACTA+GGG - tig0023844:14075-14094 None:intergenic 15.0%
!! AATGAATAAACAAAATAACT+AGG - tig0023844:14076-14095 None:intergenic 15.0%
!! ATGAATAAACAAAATAACTA+GGG - tig0023844:14075-14094 None:intergenic 15.0%
!! AATGAATAAACAAAATAACT+AGG - tig0023844:14076-14095 None:intergenic 15.0%
!!! ATTTTATTTTTTCATGTTGC+AGG + tig0023844:12719-12738 Msa1411820:intron 20.0%
!!! TTTTTGAGAAATGAATTACA+AGG + tig0023844:12959-12978 Msa1411820:CDS 20.0%
!! ACACTATAATTCAAGATAAT+AGG - tig0023844:13334-13353 None:intergenic 20.0%
!! TATTATCTTGAATTATAGTG+TGG + tig0023844:13333-13352 Msa1411820:CDS 20.0%
!!! TAAATATTTGTTGATCATCA+AGG - tig0023844:13402-13421 None:intergenic 20.0%
!!! ACAAATATTTAAGATTGTGT+TGG + tig0023844:13411-13430 Msa1411820:CDS 20.0%
!! TGAATAAACAAAATAACTAG+GGG - tig0023844:14074-14093 None:intergenic 20.0%
!! TTGTTTATTCATTATGTTTC+AGG + tig0023844:14083-14102 Msa1411820:three_prime_UTR 20.0%
!! TGTTTATTCATTATGTTTCA+GGG + tig0023844:14084-14103 Msa1411820:three_prime_UTR 20.0%
!!! ATTTTATTTTTTCATGTTGC+AGG + tig0023844:12719-12738 Msa1411820:intron 20.0%
!!! TTTTTGAGAAATGAATTACA+AGG + tig0023844:12959-12978 Msa1411820:CDS 20.0%
!! ACACTATAATTCAAGATAAT+AGG - tig0023844:13334-13353 None:intergenic 20.0%
!! TATTATCTTGAATTATAGTG+TGG + tig0023844:13333-13352 Msa1411820:CDS 20.0%
!!! TAAATATTTGTTGATCATCA+AGG - tig0023844:13402-13421 None:intergenic 20.0%
!!! ACAAATATTTAAGATTGTGT+TGG + tig0023844:13411-13430 Msa1411820:CDS 20.0%
!! TGAATAAACAAAATAACTAG+GGG - tig0023844:14074-14093 None:intergenic 20.0%
!! TTGTTTATTCATTATGTTTC+AGG + tig0023844:14083-14102 Msa1411820:three_prime_UTR 20.0%
!! TGTTTATTCATTATGTTTCA+GGG + tig0023844:14084-14103 Msa1411820:three_prime_UTR 20.0%
! TGAAACGTTGTTATAGAAAA+AGG - tig0023844:12455-12474 None:intergenic 25.0%
!! GTCTCTTTATTTGAAGAATT+CGG + tig0023844:12749-12768 Msa1411820:CDS 25.0%
!!! GTTTTTTCATTATACTCTCT+CGG + tig0023844:12854-12873 Msa1411820:CDS 25.0%
!!! TTTTTTCATTATACTCTCTC+GGG + tig0023844:12855-12874 Msa1411820:CDS 25.0%
! TTTCTCAAAAAACTCAACAA+TGG - tig0023844:12950-12969 None:intergenic 25.0%
! AATGAACCGAAAAATTTATC+TGG + tig0023844:13022-13041 Msa1411820:CDS 25.0%
! ATGAACCGAAAAATTTATCT+GGG + tig0023844:13023-13042 Msa1411820:CDS 25.0%
! TAACAAAGTAAATTTGTCGA+AGG + tig0023844:13111-13130 Msa1411820:CDS 25.0%
! ATAGATTTCTTAAAACCCTT+TGG + tig0023844:13172-13191 Msa1411820:CDS 25.0%
! TCAAGATTGGGTATAAATAT+AGG + tig0023844:13605-13624 Msa1411820:CDS 25.0%
! CATAGGTATGAAATAAAGAA+GGG + tig0023844:13892-13911 Msa1411820:CDS 25.0%
! ATGAAATAAAGAAGGGTTTA+AGG + tig0023844:13899-13918 Msa1411820:CDS 25.0%
! TGAAATAAAGAAGGGTTTAA+GGG + tig0023844:13900-13919 Msa1411820:CDS 25.0%
! AAACTAATGTACAAGGAAAA+GGG - tig0023844:14046-14065 None:intergenic 25.0%
! AAAACTAATGTACAAGGAAA+AGG - tig0023844:14047-14066 None:intergenic 25.0%
! TGAAACGTTGTTATAGAAAA+AGG - tig0023844:12455-12474 None:intergenic 25.0%
!! GTCTCTTTATTTGAAGAATT+CGG + tig0023844:12749-12768 Msa1411820:CDS 25.0%
!!! GTTTTTTCATTATACTCTCT+CGG + tig0023844:12854-12873 Msa1411820:CDS 25.0%
!!! TTTTTTCATTATACTCTCTC+GGG + tig0023844:12855-12874 Msa1411820:CDS 25.0%
! TTTCTCAAAAAACTCAACAA+TGG - tig0023844:12950-12969 None:intergenic 25.0%
! AATGAACCGAAAAATTTATC+TGG + tig0023844:13022-13041 Msa1411820:CDS 25.0%
! ATGAACCGAAAAATTTATCT+GGG + tig0023844:13023-13042 Msa1411820:CDS 25.0%
! TAACAAAGTAAATTTGTCGA+AGG + tig0023844:13111-13130 Msa1411820:CDS 25.0%
! ATAGATTTCTTAAAACCCTT+TGG + tig0023844:13172-13191 Msa1411820:CDS 25.0%
! TCAAGATTGGGTATAAATAT+AGG + tig0023844:13605-13624 Msa1411820:CDS 25.0%
! CATAGGTATGAAATAAAGAA+GGG + tig0023844:13892-13911 Msa1411820:CDS 25.0%
! ATGAAATAAAGAAGGGTTTA+AGG + tig0023844:13899-13918 Msa1411820:CDS 25.0%
! TGAAATAAAGAAGGGTTTAA+GGG + tig0023844:13900-13919 Msa1411820:CDS 25.0%
! AAACTAATGTACAAGGAAAA+GGG - tig0023844:14046-14065 None:intergenic 25.0%
! AAAACTAATGTACAAGGAAA+AGG - tig0023844:14047-14066 None:intergenic 25.0%
CCATGAGTAAAATAATGCTA+TGG - tig0023844:12351-12370 None:intergenic 30.0%
!! CCATAGCATTATTTTACTCA+TGG + tig0023844:12348-12367 Msa1411820:five_prime_UTR 30.0%
! TGTGGATAATTTGATGGATA+GGG - tig0023844:12479-12498 None:intergenic 30.0%
! ATGTGGATAATTTGATGGAT+AGG - tig0023844:12480-12499 None:intergenic 30.0%
GAAAATGAAAACGGAAAAAG+TGG - tig0023844:12586-12605 None:intergenic 30.0%
ATGGAATAGAGTTAAGTTCA+GGG - tig0023844:12814-12833 None:intergenic 30.0%
AATGGAATAGAGTTAAGTTC+AGG - tig0023844:12815-12834 None:intergenic 30.0%
TGAACTTAACTCTATTCCAT+TGG + tig0023844:12814-12833 Msa1411820:CDS 30.0%
! GGAAACCCAGATAAATTTTT+CGG - tig0023844:13031-13050 None:intergenic 30.0%
ACATGTACAATCTTATCAAC+AGG - tig0023844:13088-13107 None:intergenic 30.0%
ATCAAATGAATACCACCAAA+GGG - tig0023844:13190-13209 None:intergenic 30.0%
AATCAAATGAATACCACCAA+AGG - tig0023844:13191-13210 None:intergenic 30.0%
AATCACAATTGAGAATCACA+GGG - tig0023844:13222-13241 None:intergenic 30.0%
AAATCACAATTGAGAATCAC+AGG - tig0023844:13223-13242 None:intergenic 30.0%
TCAGTAAGAACTCTAATTCT+AGG - tig0023844:13262-13281 None:intergenic 30.0%
AGGAACATATAAAGTTTCTG+AGG + tig0023844:13365-13384 Msa1411820:CDS 30.0%
TCCTAGAATACAATTTCTCA+AGG + tig0023844:13477-13496 Msa1411820:CDS 30.0%
TCCTTGAGAAATTGTATTCT+AGG - tig0023844:13481-13500 None:intergenic 30.0%
ATACAATTTCTCAAGGAATG+TGG + tig0023844:13484-13503 Msa1411820:CDS 30.0%
TACAATTTCTCAAGGAATGT+GGG + tig0023844:13485-13504 Msa1411820:CDS 30.0%
! TTGGGTTTTTGATCAAGATT+GGG + tig0023844:13593-13612 Msa1411820:CDS 30.0%
TGGGTATAAATATAGGACTA+AGG + tig0023844:13612-13631 Msa1411820:CDS 30.0%
AAAACCCATAGTTCAAGAAT+AGG - tig0023844:13702-13721 None:intergenic 30.0%
! TTGATGACAGAATTAAGCAT+AGG + tig0023844:13875-13894 Msa1411820:CDS 30.0%
GCATAGGTATGAAATAAAGA+AGG + tig0023844:13891-13910 Msa1411820:CDS 30.0%
GAAATAAAGAAGGGTTTAAG+GGG + tig0023844:13901-13920 Msa1411820:CDS 30.0%
AAATAAAGAAGGGTTTAAGG+GGG + tig0023844:13902-13921 Msa1411820:CDS 30.0%
! TCTTTGCACTAACTTTTCTT+GGG - tig0023844:14118-14137 None:intergenic 30.0%
CCATGAGTAAAATAATGCTA+TGG - tig0023844:12351-12370 None:intergenic 30.0%
!! CCATAGCATTATTTTACTCA+TGG + tig0023844:12348-12367 Msa1411820:five_prime_UTR 30.0%
! TGTGGATAATTTGATGGATA+GGG - tig0023844:12479-12498 None:intergenic 30.0%
! ATGTGGATAATTTGATGGAT+AGG - tig0023844:12480-12499 None:intergenic 30.0%
GAAAATGAAAACGGAAAAAG+TGG - tig0023844:12586-12605 None:intergenic 30.0%
ATGGAATAGAGTTAAGTTCA+GGG - tig0023844:12814-12833 None:intergenic 30.0%
AATGGAATAGAGTTAAGTTC+AGG - tig0023844:12815-12834 None:intergenic 30.0%
TGAACTTAACTCTATTCCAT+TGG + tig0023844:12814-12833 Msa1411820:CDS 30.0%
! GGAAACCCAGATAAATTTTT+CGG - tig0023844:13031-13050 None:intergenic 30.0%
ACATGTACAATCTTATCAAC+AGG - tig0023844:13088-13107 None:intergenic 30.0%
ATCAAATGAATACCACCAAA+GGG - tig0023844:13190-13209 None:intergenic 30.0%
AATCAAATGAATACCACCAA+AGG - tig0023844:13191-13210 None:intergenic 30.0%
AATCACAATTGAGAATCACA+GGG - tig0023844:13222-13241 None:intergenic 30.0%
AAATCACAATTGAGAATCAC+AGG - tig0023844:13223-13242 None:intergenic 30.0%
TCAGTAAGAACTCTAATTCT+AGG - tig0023844:13262-13281 None:intergenic 30.0%
AGGAACATATAAAGTTTCTG+AGG + tig0023844:13365-13384 Msa1411820:CDS 30.0%
TCCTAGAATACAATTTCTCA+AGG + tig0023844:13477-13496 Msa1411820:CDS 30.0%
TCCTTGAGAAATTGTATTCT+AGG - tig0023844:13481-13500 None:intergenic 30.0%
ATACAATTTCTCAAGGAATG+TGG + tig0023844:13484-13503 Msa1411820:CDS 30.0%
TACAATTTCTCAAGGAATGT+GGG + tig0023844:13485-13504 Msa1411820:CDS 30.0%
! TTGGGTTTTTGATCAAGATT+GGG + tig0023844:13593-13612 Msa1411820:CDS 30.0%
TGGGTATAAATATAGGACTA+AGG + tig0023844:13612-13631 Msa1411820:CDS 30.0%
AAAACCCATAGTTCAAGAAT+AGG - tig0023844:13702-13721 None:intergenic 30.0%
! TTGATGACAGAATTAAGCAT+AGG + tig0023844:13875-13894 Msa1411820:CDS 30.0%
GCATAGGTATGAAATAAAGA+AGG + tig0023844:13891-13910 Msa1411820:CDS 30.0%
GAAATAAAGAAGGGTTTAAG+GGG + tig0023844:13901-13920 Msa1411820:CDS 30.0%
AAATAAAGAAGGGTTTAAGG+GGG + tig0023844:13902-13921 Msa1411820:CDS 30.0%
! TCTTTGCACTAACTTTTCTT+GGG - tig0023844:14118-14137 None:intergenic 30.0%
AAACGGAAAAAGTGGTTGTT+TGG - tig0023844:12578-12597 None:intergenic 35.0%
TACATTAGCGAATGCATGTA+AGG - tig0023844:12700-12719 None:intergenic 35.0%
TGGAATAGAGTTAAGTTCAG+GGG - tig0023844:12813-12832 None:intergenic 35.0%
TTCAGTGACTAAGTGATTGA+TGG - tig0023844:12894-12913 None:intergenic 35.0%
TTGAGAAATCAAAGCTGAAG+CGG + tig0023844:12987-13006 Msa1411820:CDS 35.0%
GATTTCTTAAAACCCTTTGG+TGG + tig0023844:13175-13194 Msa1411820:CDS 35.0%
AGAGTTCTTACTGAGTTAAG+TGG + tig0023844:13268-13287 Msa1411820:CDS 35.0%
TTATAGTGTGGAACATCTTG+AGG + tig0023844:13345-13364 Msa1411820:CDS 35.0%
! TAAGATTGTGTTGGTGTTTC+CGG + tig0023844:13420-13439 Msa1411820:CDS 35.0%
! CTTGGGTTTTTGATCAAGAT+TGG + tig0023844:13592-13611 Msa1411820:CDS 35.0%
TGAGCCTATTCTTGAACTAT+GGG + tig0023844:13695-13714 Msa1411820:CDS 35.0%
TGATTATACTGCAGTATCTG+AGG - tig0023844:13760-13779 None:intergenic 35.0%
AATAAAGAAGGGTTTAAGGG+GGG + tig0023844:13903-13922 Msa1411820:CDS 35.0%
! CTCTTTGCACTAACTTTTCT+TGG - tig0023844:14119-14138 None:intergenic 35.0%
AAACGGAAAAAGTGGTTGTT+TGG - tig0023844:12578-12597 None:intergenic 35.0%
TACATTAGCGAATGCATGTA+AGG - tig0023844:12700-12719 None:intergenic 35.0%
TGGAATAGAGTTAAGTTCAG+GGG - tig0023844:12813-12832 None:intergenic 35.0%
TTCAGTGACTAAGTGATTGA+TGG - tig0023844:12894-12913 None:intergenic 35.0%
TTGAGAAATCAAAGCTGAAG+CGG + tig0023844:12987-13006 Msa1411820:CDS 35.0%
GATTTCTTAAAACCCTTTGG+TGG + tig0023844:13175-13194 Msa1411820:CDS 35.0%
AGAGTTCTTACTGAGTTAAG+TGG + tig0023844:13268-13287 Msa1411820:CDS 35.0%
TTATAGTGTGGAACATCTTG+AGG + tig0023844:13345-13364 Msa1411820:CDS 35.0%
! TAAGATTGTGTTGGTGTTTC+CGG + tig0023844:13420-13439 Msa1411820:CDS 35.0%
! CTTGGGTTTTTGATCAAGAT+TGG + tig0023844:13592-13611 Msa1411820:CDS 35.0%
TGAGCCTATTCTTGAACTAT+GGG + tig0023844:13695-13714 Msa1411820:CDS 35.0%
TGATTATACTGCAGTATCTG+AGG - tig0023844:13760-13779 None:intergenic 35.0%
AATAAAGAAGGGTTTAAGGG+GGG + tig0023844:13903-13922 Msa1411820:CDS 35.0%
! CTCTTTGCACTAACTTTTCT+TGG - tig0023844:14119-14138 None:intergenic 35.0%
!! GCATTATTTTACTCATGGCC+AGG + tig0023844:12353-12372 Msa1411820:five_prime_UTR 40.0%
CTTTGCAGTTTGACTAGAGA+AGG + tig0023844:12387-12406 Msa1411820:five_prime_UTR 40.0%
!! AAGGTGCTACTTTGCAGAAA+TGG + tig0023844:12406-12425 Msa1411820:exon 40.0%
CGGGAATGTGGATAATTTGA+TGG - tig0023844:12485-12504 None:intergenic 40.0%
AGTTTGAAGATGAGGGGAAA+GGG - tig0023844:12519-12538 None:intergenic 40.0%
AGGGTTGAGTTTGAAGATGA+GGG - tig0023844:12526-12545 None:intergenic 40.0%
! AAAAAGTGGTTGTTTGGTGG+TGG - tig0023844:12572-12591 None:intergenic 40.0%
TGGAGGGTCGAAAATGAAAA+CGG - tig0023844:12595-12614 None:intergenic 40.0%
GAATGACACATTGACATTGG+GGG - tig0023844:12642-12661 None:intergenic 40.0%
CGAATGACACATTGACATTG+GGG - tig0023844:12643-12662 None:intergenic 40.0%
CCGAATGACACATTGACATT+GGG - tig0023844:12644-12663 None:intergenic 40.0%
! CCCAATGTCAATGTGTCATT+CGG + tig0023844:12641-12660 Msa1411820:CDS 40.0%
ACCGAATGACACATTGACAT+TGG - tig0023844:12645-12664 None:intergenic 40.0%
TTTATCTGGGTTTCCTCAGA+AGG + tig0023844:13036-13055 Msa1411820:CDS 40.0%
! GTTCGATTGCTTGTTGATAG+TGG + tig0023844:13058-13077 Msa1411820:CDS 40.0%
GTTCTTACTGAGTTAAGTGG+TGG + tig0023844:13271-13290 Msa1411820:CDS 40.0%
GTGGAGATGAGGATAGTATT+GGG + tig0023844:13290-13309 Msa1411820:CDS 40.0%
!! GTATTGGGAAAGTGCTGAAT+AGG + tig0023844:13305-13324 Msa1411820:CDS 40.0%
AAAACCCAAGCTTATACGCA+AGG - tig0023844:13582-13601 None:intergenic 40.0%
CTGTGAGAATATGCAGAAGA+TGG + tig0023844:13672-13691 Msa1411820:CDS 40.0%
GTGAGCCTATTCTTGAACTA+TGG + tig0023844:13694-13713 Msa1411820:CDS 40.0%
! GAAGATGGAGTACTTGATAG+AGG + tig0023844:13795-13814 Msa1411820:CDS 40.0%
TCGTGACATTCAAGAGTTAC+TGG + tig0023844:13825-13844 Msa1411820:CDS 40.0%
! CTGGATTTTCCTGCATTTCT+TGG + tig0023844:13844-13863 Msa1411820:CDS 40.0%
AGCTTGTATCCAAGAAATGC+AGG - tig0023844:13856-13875 None:intergenic 40.0%
! GTTTCAAGTGAGAACTTCAC+TGG + tig0023844:13955-13974 Msa1411820:CDS 40.0%
TGTACAAGGAAAAGGGAAAC+AGG - tig0023844:14039-14058 None:intergenic 40.0%
GGCAGCAAAACTAATGTACA+AGG - tig0023844:14053-14072 None:intergenic 40.0%
!! GCATTATTTTACTCATGGCC+AGG + tig0023844:12353-12372 Msa1411820:five_prime_UTR 40.0%
CTTTGCAGTTTGACTAGAGA+AGG + tig0023844:12387-12406 Msa1411820:five_prime_UTR 40.0%
!! AAGGTGCTACTTTGCAGAAA+TGG + tig0023844:12406-12425 Msa1411820:exon 40.0%
CGGGAATGTGGATAATTTGA+TGG - tig0023844:12485-12504 None:intergenic 40.0%
AGTTTGAAGATGAGGGGAAA+GGG - tig0023844:12519-12538 None:intergenic 40.0%
AGGGTTGAGTTTGAAGATGA+GGG - tig0023844:12526-12545 None:intergenic 40.0%
! AAAAAGTGGTTGTTTGGTGG+TGG - tig0023844:12572-12591 None:intergenic 40.0%
TGGAGGGTCGAAAATGAAAA+CGG - tig0023844:12595-12614 None:intergenic 40.0%
GAATGACACATTGACATTGG+GGG - tig0023844:12642-12661 None:intergenic 40.0%
CGAATGACACATTGACATTG+GGG - tig0023844:12643-12662 None:intergenic 40.0%
CCGAATGACACATTGACATT+GGG - tig0023844:12644-12663 None:intergenic 40.0%
! CCCAATGTCAATGTGTCATT+CGG + tig0023844:12641-12660 Msa1411820:CDS 40.0%
ACCGAATGACACATTGACAT+TGG - tig0023844:12645-12664 None:intergenic 40.0%
TTTATCTGGGTTTCCTCAGA+AGG + tig0023844:13036-13055 Msa1411820:CDS 40.0%
! GTTCGATTGCTTGTTGATAG+TGG + tig0023844:13058-13077 Msa1411820:CDS 40.0%
GTTCTTACTGAGTTAAGTGG+TGG + tig0023844:13271-13290 Msa1411820:CDS 40.0%
GTGGAGATGAGGATAGTATT+GGG + tig0023844:13290-13309 Msa1411820:CDS 40.0%
!! GTATTGGGAAAGTGCTGAAT+AGG + tig0023844:13305-13324 Msa1411820:CDS 40.0%
AAAACCCAAGCTTATACGCA+AGG - tig0023844:13582-13601 None:intergenic 40.0%
CTGTGAGAATATGCAGAAGA+TGG + tig0023844:13672-13691 Msa1411820:CDS 40.0%
GTGAGCCTATTCTTGAACTA+TGG + tig0023844:13694-13713 Msa1411820:CDS 40.0%
! GAAGATGGAGTACTTGATAG+AGG + tig0023844:13795-13814 Msa1411820:CDS 40.0%
TCGTGACATTCAAGAGTTAC+TGG + tig0023844:13825-13844 Msa1411820:CDS 40.0%
! CTGGATTTTCCTGCATTTCT+TGG + tig0023844:13844-13863 Msa1411820:CDS 40.0%
AGCTTGTATCCAAGAAATGC+AGG - tig0023844:13856-13875 None:intergenic 40.0%
! GTTTCAAGTGAGAACTTCAC+TGG + tig0023844:13955-13974 Msa1411820:CDS 40.0%
TGTACAAGGAAAAGGGAAAC+AGG - tig0023844:14039-14058 None:intergenic 40.0%
GGCAGCAAAACTAATGTACA+AGG - tig0023844:14053-14072 None:intergenic 40.0%
GAGTTTGAAGATGAGGGGAA+AGG - tig0023844:12520-12539 None:intergenic 45.0%
GGGTTGAGTTTGAAGATGAG+GGG - tig0023844:12525-12544 None:intergenic 45.0%
GAGGGTTGAGTTTGAAGATG+AGG - tig0023844:12527-12546 None:intergenic 45.0%
! TGATTTGGCGAGGAAGGAAA+AGG - tig0023844:12549-12568 None:intergenic 45.0%
!! GTTGTTTGGTGGTGGTGATT+TGG - tig0023844:12564-12583 None:intergenic 45.0%
CGGAAAAAGTGGTTGTTTGG+TGG - tig0023844:12575-12594 None:intergenic 45.0%
AGTAACTACTACAGCGGCAA+CGG - tig0023844:12619-12638 None:intergenic 45.0%
CGATCACGCAATGAATCCAA+TGG - tig0023844:12833-12852 None:intergenic 45.0%
ACAAGCAATCGAACCTTCTG+AGG - tig0023844:13052-13071 None:intergenic 45.0%
TGTCGAAGGCGATTTGTCAT+AGG + tig0023844:13125-13144 Msa1411820:CDS 45.0%
! TGAGTTAAGTGGTGGAGATG+AGG + tig0023844:13279-13298 Msa1411820:CDS 45.0%
GGTGGAGATGAGGATAGTAT+TGG + tig0023844:13289-13308 Msa1411820:CDS 45.0%
CTGCTACTGGTAAAGATAGC+CGG - tig0023844:13442-13461 None:intergenic 45.0%
TCTTTACCAGTAGCAGAGAG+AGG + tig0023844:13446-13465 Msa1411820:CDS 45.0%
GCTCAAAAACAACGCTGCTT+TGG - tig0023844:13542-13561 None:intergenic 45.0%
CGAACCTTGCGTATAAGCTT+GGG + tig0023844:13575-13594 Msa1411820:CDS 45.0%
TAGGACTAAGGAGTTAGCAG+TGG + tig0023844:13624-13643 Msa1411820:CDS 45.0%
! TGCCTCTCTAGAGAAGAAGA+TGG + tig0023844:13780-13799 Msa1411820:CDS 45.0%
! CTCCATCTTCTTCTCTAGAG+AGG - tig0023844:13785-13804 None:intergenic 45.0%
GAGTTTGAAGATGAGGGGAA+AGG - tig0023844:12520-12539 None:intergenic 45.0%
GGGTTGAGTTTGAAGATGAG+GGG - tig0023844:12525-12544 None:intergenic 45.0%
GAGGGTTGAGTTTGAAGATG+AGG - tig0023844:12527-12546 None:intergenic 45.0%
! TGATTTGGCGAGGAAGGAAA+AGG - tig0023844:12549-12568 None:intergenic 45.0%
!! GTTGTTTGGTGGTGGTGATT+TGG - tig0023844:12564-12583 None:intergenic 45.0%
CGGAAAAAGTGGTTGTTTGG+TGG - tig0023844:12575-12594 None:intergenic 45.0%
AGTAACTACTACAGCGGCAA+CGG - tig0023844:12619-12638 None:intergenic 45.0%
CGATCACGCAATGAATCCAA+TGG - tig0023844:12833-12852 None:intergenic 45.0%
ACAAGCAATCGAACCTTCTG+AGG - tig0023844:13052-13071 None:intergenic 45.0%
TGTCGAAGGCGATTTGTCAT+AGG + tig0023844:13125-13144 Msa1411820:CDS 45.0%
! TGAGTTAAGTGGTGGAGATG+AGG + tig0023844:13279-13298 Msa1411820:CDS 45.0%
GGTGGAGATGAGGATAGTAT+TGG + tig0023844:13289-13308 Msa1411820:CDS 45.0%
CTGCTACTGGTAAAGATAGC+CGG - tig0023844:13442-13461 None:intergenic 45.0%
TCTTTACCAGTAGCAGAGAG+AGG + tig0023844:13446-13465 Msa1411820:CDS 45.0%
GCTCAAAAACAACGCTGCTT+TGG - tig0023844:13542-13561 None:intergenic 45.0%
CGAACCTTGCGTATAAGCTT+GGG + tig0023844:13575-13594 Msa1411820:CDS 45.0%
TAGGACTAAGGAGTTAGCAG+TGG + tig0023844:13624-13643 Msa1411820:CDS 45.0%
! TGCCTCTCTAGAGAAGAAGA+TGG + tig0023844:13780-13799 Msa1411820:CDS 45.0%
! CTCCATCTTCTTCTCTAGAG+AGG - tig0023844:13785-13804 None:intergenic 45.0%
AGATGAGGGGAAAGGGTTGA+GGG - tig0023844:12512-12531 None:intergenic 50.0%
AAGATGAGGGGAAAGGGTTG+AGG - tig0023844:12513-12532 None:intergenic 50.0%
TTGGCGAGGAAGGAAAAGGA+GGG - tig0023844:12545-12564 None:intergenic 50.0%
TTTGGCGAGGAAGGAAAAGG+AGG - tig0023844:12546-12565 None:intergenic 50.0%
TGGGGGAGTAACTACTACAG+CGG - tig0023844:12625-12644 None:intergenic 50.0%
CAGTTTCCTCTCTCTGCTAC+TGG - tig0023844:13455-13474 None:intergenic 50.0%
GCTTATACGCAAGGTTCGCA+CGG - tig0023844:13573-13592 None:intergenic 50.0%
GCGAACCTTGCGTATAAGCT+TGG + tig0023844:13574-13593 Msa1411820:CDS 50.0%
AGATGAGGGGAAAGGGTTGA+GGG - tig0023844:12512-12531 None:intergenic 50.0%
AAGATGAGGGGAAAGGGTTG+AGG - tig0023844:12513-12532 None:intergenic 50.0%
TTGGCGAGGAAGGAAAAGGA+GGG - tig0023844:12545-12564 None:intergenic 50.0%
TTTGGCGAGGAAGGAAAAGG+AGG - tig0023844:12546-12565 None:intergenic 50.0%
TGGGGGAGTAACTACTACAG+CGG - tig0023844:12625-12644 None:intergenic 50.0%
CAGTTTCCTCTCTCTGCTAC+TGG - tig0023844:13455-13474 None:intergenic 50.0%
GCTTATACGCAAGGTTCGCA+CGG - tig0023844:13573-13592 None:intergenic 50.0%
GCGAACCTTGCGTATAAGCT+TGG + tig0023844:13574-13593 Msa1411820:CDS 50.0%
!! TGCAAAGCGCTGTGCAATCC+TGG - tig0023844:12374-12393 None:intergenic 55.0%
GTTGAGGGTGAACGGGAATG+TGG - tig0023844:12497-12516 None:intergenic 55.0%
GGAAAGGGTTGAGGGTGAAC+GGG - tig0023844:12504-12523 None:intergenic 55.0%
GGGAAAGGGTTGAGGGTGAA+CGG - tig0023844:12505-12524 None:intergenic 55.0%
! TGGTGGTGATTTGGCGAGGA+AGG - tig0023844:12555-12574 None:intergenic 55.0%
!! TTGGTGGTGGTGATTTGGCG+AGG - tig0023844:12559-12578 None:intergenic 55.0%
ACTACTACAGCGGCAACGGA+TGG - tig0023844:12615-12634 None:intergenic 55.0%
!! TGCAAAGCGCTGTGCAATCC+TGG - tig0023844:12374-12393 None:intergenic 55.0%
GTTGAGGGTGAACGGGAATG+TGG - tig0023844:12497-12516 None:intergenic 55.0%
GGAAAGGGTTGAGGGTGAAC+GGG - tig0023844:12504-12523 None:intergenic 55.0%
GGGAAAGGGTTGAGGGTGAA+CGG - tig0023844:12505-12524 None:intergenic 55.0%
! TGGTGGTGATTTGGCGAGGA+AGG - tig0023844:12555-12574 None:intergenic 55.0%
!! TTGGTGGTGGTGATTTGGCG+AGG - tig0023844:12559-12578 None:intergenic 55.0%
ACTACTACAGCGGCAACGGA+TGG - tig0023844:12615-12634 None:intergenic 55.0%
CTACAGCGGCAACGGATGGA+GGG - tig0023844:12611-12630 None:intergenic 60.0%
ACTACAGCGGCAACGGATGG+AGG - tig0023844:12612-12631 None:intergenic 60.0%
CTACAGCGGCAACGGATGGA+GGG - tig0023844:12611-12630 None:intergenic 60.0%
ACTACAGCGGCAACGGATGG+AGG - tig0023844:12612-12631 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0023844 gene 12335 14141 12335 ID=Msa1411820;Name=Msa1411820
tig0023844 mRNA 12335 14141 12335 ID=Msa1411820-mRNA-1;Parent=Msa1411820;Name=Msa1411820-mRNA-1;_AED=0.02;_eAED=0.02;_QI=90|1|1|1|1|1|2|121|505
tig0023844 exon 12335 12662 12335 ID=Msa1411820-mRNA-1:exon:20326;Parent=Msa1411820-mRNA-1
tig0023844 exon 12741 14141 12741 ID=Msa1411820-mRNA-1:exon:20327;Parent=Msa1411820-mRNA-1
tig0023844 five_prime_UTR 12335 12424 12335 ID=Msa1411820-mRNA-1:five_prime_utr;Parent=Msa1411820-mRNA-1
tig0023844 CDS 12425 12662 12425 ID=Msa1411820-mRNA-1:cds;Parent=Msa1411820-mRNA-1
tig0023844 CDS 12741 14020 12741 ID=Msa1411820-mRNA-1:cds;Parent=Msa1411820-mRNA-1
tig0023844 three_prime_UTR 14021 14141 14021 ID=Msa1411820-mRNA-1:three_prime_utr;Parent=Msa1411820-mRNA-1
Gene Sequence

>Msa1411820

ATGGCGCTAGCAGCACTTGCTTCTTGTCCTTTTTCTATAACAACGTTTCATCCCTATCCATCAAATTATCCACATTCCCGTTCACCCTCAACCCTTTCCCCTCATCTTCAAACTCAACCCTCCTTTTCCTTCCTCGCCAAATCACCACCACCAAACAACCACTTTTTCCGTTTTCATTTTCGACCCTCCATCCGTTGCCGCTGTAGTAGTTACTCCCCCAATGTCAATGTGTCATTCGGTACACTTGTCTCTTTATTTGAAGAATTCGGTATTAGTTTCAAGCAAACAGAATTGCTTTTACTCAATGCCCCTGAACTTAACTCTATTCCATTGGATTCATTGCGTGATCGCGTTTTTTCATTATACTCTCTCGGGTTAGATCGTGTTTCCATCAATCACTTAGTCACTGAACGTTTAACTGTGCTGACTGCTAATGAAATTGATCCATTGTTGAGTTTTTTGAGAAATGAATTACAAGGACAACTTGAGAAATCAAAGCTGAAGCGGCTTTTATTAGCTAATGAACCGAAAAATTTATCTGGGTTTCCTCAGAAGGTTCGATTGCTTGTTGATAGTGGAATTCCTGTTGATAAGATTGTACATGTGCTTAACAAAGTAAATTTGTCGAAGGCGATTTGTCATAGGTCAATAGATGAAATTGAAAGAATTATAGATTTCTTAAAACCCTTTGGTGGTATTCATTTGATTGTGAAGCACCCTGTGATTCTCAATTGTGATTTGCATAATCAGCTTATTCCTAGAATTAGAGTTCTTACTGAGTTAAGTGGTGGAGATGAGGATAGTATTGGGAAAGTGCTGAATAGGTTTCCTATTATCTTGAATTATAGTGTGGAACATCTTGAGGAACATATAAAGTTTCTGAGGTGTTTTGCAGACCTTGATGATCAACAAATATTTAAGATTGTGTTGGTGTTTCCGGCTATCTTTACCAGTAGCAGAGAGAGGAAACTGCGTCCTAGAATACAATTTCTCAAGGAATGTGGGTTAGACGCTGACGAAATCTTCAAGTTCTTGACCAAAGCAGCGTTGTTTTTGAGCATTTCGTTCCGTGCGAACCTTGCGTATAAGCTTGGGTTTTTGATCAAGATTGGGTATAAATATAGGACTAAGGAGTTAGCAGTGGTGATTGCAGCTTCTACGAGAATAAGCTGTGAGAATATGCAGAAGATGGTGAGCCTATTCTTGAACTATGGGTTTTCATTAGAAGACATATTTGTTATGAGCAAGAAGCATCCTCAGATACTGCAGTATAATCATGCCTCTCTAGAGAAGAAGATGGAGTACTTGATAGAGGAGATGAATCGTGACATTCAAGAGTTACTGGATTTTCCTGCATTTCTTGGATACAAGCTTGATGACAGAATTAAGCATAGGTATGAAATAAAGAAGGGTTTAAGGGGGGAACAAATGTCTATCAATAAGCTTTTAACTGTTTCAAGTGAGAACTTCACTGGCAAACGAAAAAAAGCTTCTTCTGTAAAATATGAATTGAAATAA

Protein sequence

>Msa1411820

MALAALASCPFSITTFHPYPSNYPHSRSPSTLSPHLQTQPSFSFLAKSPPPNNHFFRFHFRPSIRCRCSSYSPNVNVSFGTLVSLFEEFGISFKQTELLLLNAPELNSIPLDSLRDRVFSLYSLGLDRVSINHLVTERLTVLTANEIDPLLSFLRNELQGQLEKSKLKRLLLANEPKNLSGFPQKVRLLVDSGIPVDKIVHVLNKVNLSKAICHRSIDEIERIIDFLKPFGGIHLIVKHPVILNCDLHNQLIPRIRVLTELSGGDEDSIGKVLNRFPIILNYSVEHLEEHIKFLRCFADLDDQQIFKIVLVFPAIFTSSRERKLRPRIQFLKECGLDADEIFKFLTKAALFLSISFRANLAYKLGFLIKIGYKYRTKELAVVIAASTRISCENMQKMVSLFLNYGFSLEDIFVMSKKHPQILQYNHASLEKKMEYLIEEMNRDIQELLDFPAFLGYKLDDRIKHRYEIKKGLRGEQMSINKLLTVSSENFTGKRKKASSVKYELK*