Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223050 | XP_013465378.1 | 100.000 | 166 | 0 | 0 | 1 | 166 | 1 | 166 | 3.64e-120 | 346 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223050 | sp|Q42540|UBC7_ARATH | 92.169 | 166 | 13 | 0 | 1 | 166 | 1 | 166 | 1.18e-106 | 304 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223050 | A0A072VDB4 | 100.000 | 166 | 0 | 0 | 1 | 166 | 1 | 166 | 1.74e-120 | 346 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004340 | Msa0223050 | -0.819568 | 1.084728e-52 | -8.615850e-47 |
| Msa0008250 | Msa0223050 | -0.815521 | 8.859418e-52 | -8.615850e-47 |
| Msa0034100 | Msa0223050 | -0.800643 | 1.308955e-48 | -8.615850e-47 |
| Msa0039270 | Msa0223050 | 0.802576 | 5.253543e-49 | -8.615850e-47 |
| Msa0039590 | Msa0223050 | -0.810180 | 1.310395e-50 | -8.615850e-47 |
| Msa0064160 | Msa0223050 | -0.804283 | 2.326946e-49 | -8.615850e-47 |
| Msa0064170 | Msa0223050 | -0.818407 | 1.991846e-52 | -8.615850e-47 |
| Msa0072910 | Msa0223050 | -0.800732 | 1.255621e-48 | -8.615850e-47 |
| Msa0080010 | Msa0223050 | 0.802264 | 6.093334e-49 | -8.615850e-47 |
| Msa0085710 | Msa0223050 | 0.801988 | 6.944385e-49 | -8.615850e-47 |
| Msa0090500 | Msa0223050 | 0.802972 | 4.352810e-49 | -8.615850e-47 |
| Msa0096860 | Msa0223050 | 0.811687 | 6.182118e-51 | -8.615850e-47 |
| Msa0110240 | Msa0223050 | 0.809681 | 1.678110e-50 | -8.615850e-47 |
| Msa0120320 | Msa0223050 | -0.810620 | 1.052630e-50 | -8.615850e-47 |
| Msa0121080 | Msa0223050 | -0.824335 | 8.536857e-54 | -8.615850e-47 |
| Msa0128110 | Msa0223050 | -0.802157 | 6.409660e-49 | -8.615850e-47 |
| Msa0129270 | Msa0223050 | 0.807893 | 4.047162e-50 | -8.615850e-47 |
| Msa0137970 | Msa0223050 | 0.805173 | 1.516689e-49 | -8.615850e-47 |
| Msa0147540 | Msa0223050 | -0.839325 | 1.694815e-57 | -8.615850e-47 |
| Msa0147800 | Msa0223050 | -0.830575 | 2.718541e-55 | -8.615850e-47 |
| Msa0154750 | Msa0223050 | 0.838825 | 2.284348e-57 | -8.615850e-47 |
| Msa0155260 | Msa0223050 | -0.811223 | 7.795948e-51 | -8.615850e-47 |
| Msa0155310 | Msa0223050 | -0.800211 | 1.602786e-48 | -8.615850e-47 |
| Msa0173260 | Msa0223050 | 0.811408 | 7.107952e-51 | -8.615850e-47 |
| Msa0183920 | Msa0223050 | 0.801399 | 9.171520e-49 | -8.615850e-47 |
| Msa0191100 | Msa0223050 | 0.805933 | 1.050882e-49 | -8.615850e-47 |
| Msa0195140 | Msa0223050 | -0.811267 | 7.624886e-51 | -8.615850e-47 |
| Msa0218430 | Msa0223050 | -0.829919 | 3.930908e-55 | -8.615850e-47 |
| Msa0219810 | Msa0223050 | 0.829673 | 4.512816e-55 | -8.615850e-47 |
| Msa0223050 | Msa0238420 | 0.830448 | 2.920018e-55 | -8.615850e-47 |
| Msa0223050 | Msa0239610 | -0.856254 | 3.643070e-62 | -8.615850e-47 |
| Msa0223050 | Msa0264220 | 0.916720 | 1.268522e-85 | -8.615850e-47 |
| Msa0223050 | Msa0302220 | 0.954837 | 1.199097e-112 | -8.615850e-47 |
| Msa0223050 | Msa0309490 | -0.820509 | 6.605141e-53 | -8.615850e-47 |
| Msa0223050 | Msa0317360 | -0.803945 | 2.735471e-49 | -8.615850e-47 |
| Msa0223050 | Msa0324220 | 0.801861 | 7.373798e-49 | -8.615850e-47 |
| Msa0223050 | Msa0339540 | 0.966143 | 1.575552e-125 | -8.615850e-47 |
| Msa0223050 | Msa0375500 | 0.802918 | 4.466828e-49 | -8.615850e-47 |
| Msa0223050 | Msa0375550 | 0.802864 | 4.583395e-49 | -8.615850e-47 |
| Msa0223050 | Msa0395300 | -0.800437 | 1.442202e-48 | -8.615850e-47 |
| Msa0223050 | Msa0424300 | 0.803759 | 2.990505e-49 | -8.615850e-47 |
| Msa0223050 | Msa0471210 | 0.809000 | 2.349275e-50 | -8.615850e-47 |
| Msa0223050 | Msa0485210 | -0.813715 | 2.224506e-51 | -8.615850e-47 |
| Msa0223050 | Msa0488900 | -0.814375 | 1.590675e-51 | -8.615850e-47 |
| Msa0223050 | Msa0515930 | 0.803151 | 3.997832e-49 | -8.615850e-47 |
| Msa0223050 | Msa0524490 | 0.822879 | 1.870613e-53 | -8.615850e-47 |
| Msa0223050 | Msa0531080 | 0.810868 | 9.305594e-51 | -8.615850e-47 |
| Msa0223050 | Msa0532910 | -0.807086 | 6.000343e-50 | -8.615850e-47 |
| Msa0223050 | Msa0561420 | -0.805283 | 1.438602e-49 | -8.615850e-47 |
| Msa0223050 | Msa0565150 | -0.804531 | 2.065816e-49 | -8.615850e-47 |
| Msa0223050 | Msa0575950 | 0.809318 | 2.007404e-50 | -8.615850e-47 |
| Msa0223050 | Msa0612880 | -0.806484 | 8.045168e-50 | -8.615850e-47 |
| Msa0223050 | Msa0615430 | -0.800322 | 1.521829e-48 | -8.615850e-47 |
| Msa0223050 | Msa0654880 | -0.817525 | 3.152341e-52 | -8.615850e-47 |
| Msa0223050 | Msa0667710 | -0.804017 | 2.643009e-49 | -8.615850e-47 |
| Msa0223050 | Msa0698480 | -0.805517 | 1.284809e-49 | -8.615850e-47 |
| Msa0223050 | Msa0698650 | -0.807147 | 5.826090e-50 | -8.615850e-47 |
| Msa0223050 | Msa0735340 | 0.810430 | 1.157330e-50 | -8.615850e-47 |
| Msa0223050 | Msa0756670 | -0.803522 | 3.348665e-49 | -8.615850e-47 |
| Msa0223050 | Msa0766540 | -0.810788 | 9.682603e-51 | -8.615850e-47 |
| Msa0223050 | Msa0770890 | -0.802542 | 5.340661e-49 | -8.615850e-47 |
| Msa0223050 | Msa0777210 | 0.807638 | 4.584450e-50 | -8.615850e-47 |
| Msa0223050 | Msa0797980 | -0.820525 | 6.551303e-53 | -8.615850e-47 |
| Msa0223050 | Msa0814350 | 0.809372 | 1.954655e-50 | -8.615850e-47 |
| Msa0223050 | Msa0830830 | -0.810403 | 1.173108e-50 | -8.615850e-47 |
| Msa0223050 | Msa0838100 | -0.807197 | 5.684705e-50 | -8.615850e-47 |
| Msa0223050 | Msa0846180 | -0.814242 | 1.702208e-51 | -8.615850e-47 |
| Msa0223050 | Msa0848720 | -0.819612 | 1.060084e-52 | -8.615850e-47 |
| Msa0223050 | Msa0854860 | 0.801977 | 6.978908e-49 | -8.615850e-47 |
| Msa0223050 | Msa0876030 | -0.808343 | 3.244769e-50 | -8.615850e-47 |
| Msa0223050 | Msa0884840 | -0.808541 | 2.944885e-50 | -8.615850e-47 |
| Msa0223050 | Msa0888900 | -0.832107 | 1.141821e-55 | -8.615850e-47 |
| Msa0223050 | Msa0896920 | 0.806092 | 9.730240e-50 | -8.615850e-47 |
| Msa0223050 | Msa0912110 | -0.804288 | 2.321369e-49 | -8.615850e-47 |
| Msa0223050 | Msa0936650 | -0.800748 | 1.245744e-48 | -8.615850e-47 |
| Msa0223050 | Msa0941520 | 0.808410 | 3.139690e-50 | -8.615850e-47 |
| Msa0223050 | Msa0973890 | -0.808369 | 3.203893e-50 | -8.615850e-47 |
| Msa0223050 | Msa0980980 | -0.813449 | 2.544979e-51 | -8.615850e-47 |
| Msa0223050 | Msa1004720 | -0.804665 | 1.937487e-49 | -8.615850e-47 |
| Msa0223050 | Msa1010470 | -0.803417 | 3.520307e-49 | -8.615850e-47 |
| Msa0223050 | Msa1036020 | 0.818294 | 2.112613e-52 | -8.615850e-47 |
| Msa0223050 | Msa1036590 | 0.807482 | 4.946595e-50 | -8.615850e-47 |
| Msa0223050 | Msa1043020 | -0.849391 | 3.333047e-60 | -8.615850e-47 |
| Msa0223050 | Msa1046220 | 0.805918 | 1.058232e-49 | -8.615850e-47 |
| Msa0223050 | Msa1052030 | -0.817922 | 2.564506e-52 | -8.615850e-47 |
| Msa0223050 | Msa1061760 | 0.800654 | 1.302006e-48 | -8.615850e-47 |
| Msa0223050 | Msa1076280 | 0.819183 | 1.327510e-52 | -8.615850e-47 |
| Msa0223050 | Msa1076520 | -0.800301 | 1.536587e-48 | -8.615850e-47 |
| Msa0223050 | Msa1076900 | 0.813900 | 2.025729e-51 | -8.615850e-47 |
| Msa0223050 | Msa1078300 | 0.825718 | 4.024189e-54 | -8.615850e-47 |
| Msa0223050 | Msa1078600 | -0.815752 | 7.871641e-52 | -8.615850e-47 |
| Msa0223050 | Msa1078770 | -0.811752 | 5.983417e-51 | -8.615850e-47 |
| Msa0223050 | Msa1085560 | 0.800681 | 1.285753e-48 | -8.615850e-47 |
| Msa0223050 | Msa1085860 | 0.804550 | 2.047159e-49 | -8.615850e-47 |
| Msa0223050 | Msa1096510 | -0.834202 | 3.434314e-56 | -8.615850e-47 |
| Msa0223050 | Msa1096520 | -0.842254 | 2.893672e-58 | -8.615850e-47 |
| Msa0223050 | Msa1096570 | -0.852561 | 4.258591e-61 | -8.615850e-47 |
| Msa0223050 | Msa1122550 | 0.803756 | 2.994109e-49 | -8.615850e-47 |
| Msa0223050 | Msa1140480 | -0.813845 | 2.082815e-51 | -8.615850e-47 |
| Msa0223050 | Msa1150860 | 0.806567 | 7.727868e-50 | -8.615850e-47 |
| Msa0223050 | Msa1169600 | -0.810280 | 1.246519e-50 | -8.615850e-47 |
| Msa0223050 | Msa1171630 | 0.830025 | 3.705142e-55 | -8.615850e-47 |
| Msa0223050 | Msa1181730 | -0.822284 | 2.572440e-53 | -8.615850e-47 |
| Msa0223050 | Msa1219780 | 0.817424 | 3.321469e-52 | -8.615850e-47 |
| Msa0223050 | Msa1251500 | 0.815225 | 1.030848e-51 | -8.615850e-47 |
| Msa0223050 | Msa1258100 | -0.814090 | 1.838672e-51 | -8.615850e-47 |
| Msa0223050 | Msa1266710 | 0.834132 | 3.576541e-56 | -8.615850e-47 |
| Msa0223050 | Msa1279320 | -0.805236 | 1.471296e-49 | -8.615850e-47 |
| Msa0223050 | Msa1283980 | 0.811376 | 7.220747e-51 | -8.615850e-47 |
| Msa0223050 | Msa1322980 | 0.802976 | 4.344727e-49 | -8.615850e-47 |
| Msa0223050 | Msa1345390 | 0.801736 | 7.823315e-49 | -8.615850e-47 |
| Msa0223050 | Msa1356730 | -0.813942 | 1.982608e-51 | -8.615850e-47 |
| Msa0223050 | Msa1359620 | -0.801396 | 9.184726e-49 | -8.615850e-47 |
| Msa0223050 | Msa1368150 | -0.801866 | 7.357655e-49 | -8.615850e-47 |
| Msa0223050 | Msa1377460 | 0.815617 | 8.432522e-52 | -8.615850e-47 |
| Msa0223050 | Msa1402000 | 0.842908 | 1.939906e-58 | -8.615850e-47 |
| Msa0223050 | Msa1403700 | -0.802078 | 6.652317e-49 | -8.615850e-47 |
| Msa0223050 | Msa1407210 | 0.823050 | 1.706316e-53 | -8.615850e-47 |
| Msa0223050 | Msa1407860 | -0.804953 | 1.686400e-49 | -8.615850e-47 |
| Msa0223050 | Msa1409060 | 0.863188 | 2.975711e-64 | -8.615850e-47 |
| Msa0223050 | Msa1420630 | -0.806473 | 8.086791e-50 | -8.615850e-47 |
| Msa0223050 | Msa1421540 | 0.819929 | 8.970667e-53 | -8.615850e-47 |
| Msa0223050 | Msa1425570 | -0.805654 | 1.202355e-49 | -8.615850e-47 |
| Msa0223050 | Msa1430630 | -0.811916 | 5.510839e-51 | -8.615850e-47 |
| Msa0223050 | Msa1450780 | -0.816849 | 4.472130e-52 | -8.615850e-47 |
| Msa0223050 | Msa1453180 | -0.818241 | 2.172157e-52 | -8.615850e-47 |
| Msa0223050 | Msa1453540 | -0.814283 | 1.666872e-51 | -8.615850e-47 |
| Msa0223050 | Msa1456620 | -0.807818 | 4.197115e-50 | -8.615850e-47 |
| Msa0223050 | Msa1460530 | -0.805065 | 1.597904e-49 | -8.615850e-47 |
| Msa0223050 | Msa1463500 | -0.807018 | 6.204677e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223050 | MtrunA17_Chr2g0328001 | 100.000 | 166 | 0 | 0 | 1 | 166 | 1 | 166 | 3.35e-124 | 346 |
| Msa0223050 | MtrunA17_Chr4g0031181 | 93.373 | 166 | 11 | 0 | 1 | 166 | 1 | 166 | 2.80e-107 | 303 |
| Msa0223050 | MtrunA17_Chr8g0362321 | 35.802 | 162 | 90 | 2 | 1 | 162 | 1 | 148 | 1.05e-33 | 116 |
| Msa0223050 | MtrunA17_Chr4g0060351 | 35.802 | 162 | 90 | 2 | 1 | 162 | 1 | 148 | 5.11e-33 | 114 |
| Msa0223050 | MtrunA17_Chr7g0275361 | 36.306 | 157 | 86 | 2 | 5 | 161 | 2 | 144 | 1.74e-30 | 108 |
| Msa0223050 | MtrunA17_Chr3g0108261 | 35.669 | 157 | 87 | 2 | 5 | 161 | 2 | 144 | 5.86e-29 | 104 |
| Msa0223050 | MtrunA17_Chr5g0432831 | 35.669 | 157 | 87 | 2 | 5 | 161 | 2 | 144 | 7.59e-29 | 103 |
| Msa0223050 | MtrunA17_Chr1g0154011 | 35.032 | 157 | 88 | 2 | 5 | 161 | 2 | 144 | 2.81e-28 | 102 |
| Msa0223050 | MtrunA17_Chr4g0037011 | 35.669 | 157 | 87 | 2 | 5 | 161 | 2 | 144 | 3.34e-28 | 102 |
| Msa0223050 | MtrunA17_Chr8g0369311 | 33.758 | 157 | 90 | 2 | 5 | 161 | 58 | 200 | 1.49e-26 | 99.8 |
| Msa0223050 | MtrunA17_Chr4g0038891 | 36.184 | 152 | 82 | 3 | 9 | 160 | 37 | 173 | 4.82e-26 | 97.8 |
| Msa0223050 | MtrunA17_Chr1g0199951 | 36.774 | 155 | 84 | 2 | 3 | 157 | 40 | 180 | 1.04e-24 | 94.7 |
| Msa0223050 | MtrunA17_Chr5g0396451 | 34.868 | 152 | 84 | 3 | 9 | 160 | 37 | 173 | 6.97e-24 | 92.0 |
| Msa0223050 | MtrunA17_Chr2g0316211 | 34.074 | 135 | 75 | 2 | 11 | 145 | 12 | 132 | 1.06e-23 | 90.9 |
| Msa0223050 | MtrunA17_Chr2g0316201 | 33.333 | 135 | 76 | 2 | 11 | 145 | 12 | 132 | 3.78e-23 | 89.4 |
| Msa0223050 | MtrunA17_Chr3g0139901 | 33.613 | 119 | 65 | 2 | 28 | 145 | 28 | 133 | 6.60e-22 | 86.3 |
| Msa0223050 | MtrunA17_Chr5g0401831 | 34.109 | 129 | 74 | 2 | 33 | 161 | 37 | 154 | 7.63e-21 | 83.6 |
| Msa0223050 | MtrunA17_Chr4g0053191 | 32.075 | 159 | 93 | 2 | 1 | 155 | 1 | 148 | 1.01e-20 | 83.2 |
| Msa0223050 | MtrunA17_Chr8g0378601 | 34.615 | 130 | 71 | 2 | 2 | 131 | 20 | 135 | 7.16e-20 | 81.3 |
| Msa0223050 | MtrunA17_Chr3g0131871 | 28.986 | 138 | 82 | 4 | 9 | 144 | 7 | 130 | 1.90e-18 | 78.2 |
| Msa0223050 | MtrunA17_Chr5g0403591 | 30.000 | 120 | 71 | 1 | 40 | 159 | 63 | 169 | 3.35e-14 | 67.0 |
| Msa0223050 | MtrunA17_Chr8g0372391 | 30.833 | 120 | 67 | 3 | 1 | 119 | 12 | 116 | 1.32e-12 | 62.0 |
| Msa0223050 | MtrunA17_Chr5g0404931 | 32.143 | 112 | 60 | 3 | 9 | 119 | 20 | 116 | 6.98e-12 | 60.1 |
| Msa0223050 | MtrunA17_Chr7g0254701 | 26.207 | 145 | 93 | 2 | 9 | 153 | 15 | 145 | 1.38e-11 | 60.8 |
| Msa0223050 | MtrunA17_Chr8g0345331 | 29.412 | 136 | 66 | 6 | 1 | 127 | 1 | 115 | 3.79e-11 | 59.7 |
| Msa0223050 | MtrunA17_Chr4g0068301 | 28.205 | 156 | 81 | 6 | 1 | 148 | 7 | 139 | 4.25e-11 | 60.1 |
| Msa0223050 | MtrunA17_Chr8g0376111 | 36.000 | 100 | 55 | 4 | 31 | 127 | 66 | 159 | 4.70e-11 | 60.1 |
| Msa0223050 | MtrunA17_Chr4g0059291 | 24.051 | 158 | 103 | 5 | 10 | 164 | 6 | 149 | 6.63e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223050 | AT5G59300.1 | 92.169 | 166 | 13 | 0 | 1 | 166 | 1 | 166 | 1.20e-107 | 304 |
| Msa0223050 | AT3G46460.1 | 91.566 | 166 | 14 | 0 | 1 | 166 | 1 | 166 | 7.09e-106 | 300 |
| Msa0223050 | AT3G55380.1 | 87.805 | 164 | 20 | 0 | 3 | 166 | 4 | 167 | 3.27e-100 | 285 |
| Msa0223050 | AT3G55380.2 | 71.717 | 198 | 22 | 1 | 3 | 166 | 4 | 201 | 4.01e-92 | 266 |
| Msa0223050 | AT3G46460.3 | 90.598 | 117 | 11 | 0 | 50 | 166 | 8 | 124 | 1.96e-78 | 229 |
| Msa0223050 | AT3G46460.2 | 90.598 | 117 | 11 | 0 | 50 | 166 | 8 | 124 | 1.96e-78 | 229 |
| Msa0223050 | AT2G02760.1 | 35.802 | 162 | 90 | 2 | 1 | 162 | 1 | 148 | 3.60e-33 | 115 |
| Msa0223050 | AT2G02760.2 | 35.802 | 162 | 90 | 2 | 1 | 162 | 1 | 148 | 3.60e-33 | 115 |
| Msa0223050 | AT2G02760.4 | 35.802 | 162 | 90 | 2 | 1 | 162 | 1 | 148 | 3.60e-33 | 115 |
| Msa0223050 | AT2G02760.3 | 35.802 | 162 | 90 | 2 | 1 | 162 | 1 | 148 | 3.60e-33 | 115 |
| Msa0223050 | AT1G14400.1 | 35.802 | 162 | 90 | 2 | 1 | 162 | 1 | 148 | 3.64e-33 | 115 |
| Msa0223050 | AT1G14400.2 | 35.802 | 162 | 90 | 2 | 1 | 162 | 1 | 148 | 3.64e-33 | 115 |
| Msa0223050 | AT5G62540.1 | 36.420 | 162 | 89 | 2 | 1 | 162 | 1 | 148 | 1.36e-32 | 114 |
| Msa0223050 | AT3G08700.2 | 33.758 | 157 | 91 | 1 | 5 | 161 | 2 | 145 | 9.23e-30 | 106 |
| Msa0223050 | AT3G08700.1 | 33.758 | 157 | 91 | 1 | 5 | 161 | 2 | 145 | 9.23e-30 | 106 |
| Msa0223050 | AT3G08690.2 | 35.669 | 157 | 87 | 2 | 5 | 161 | 2 | 144 | 9.38e-30 | 106 |
| Msa0223050 | AT3G08690.1 | 35.669 | 157 | 87 | 2 | 5 | 161 | 2 | 144 | 9.38e-30 | 106 |
| Msa0223050 | AT1G64230.2 | 36.306 | 157 | 86 | 2 | 5 | 161 | 2 | 144 | 3.87e-29 | 105 |
| Msa0223050 | AT1G64230.1 | 36.306 | 157 | 86 | 2 | 5 | 161 | 2 | 144 | 3.87e-29 | 105 |
| Msa0223050 | AT4G27960.1 | 35.032 | 157 | 88 | 2 | 5 | 161 | 2 | 144 | 6.95e-29 | 104 |
| Msa0223050 | AT5G41700.5 | 35.032 | 157 | 88 | 2 | 5 | 161 | 2 | 144 | 1.78e-28 | 103 |
| Msa0223050 | AT5G41700.2 | 35.032 | 157 | 88 | 2 | 5 | 161 | 2 | 144 | 1.78e-28 | 103 |
| Msa0223050 | AT5G41700.1 | 35.032 | 157 | 88 | 2 | 5 | 161 | 2 | 144 | 1.78e-28 | 103 |
| Msa0223050 | AT5G53300.2 | 34.395 | 157 | 89 | 2 | 5 | 161 | 2 | 144 | 3.56e-28 | 102 |
| Msa0223050 | AT5G53300.4 | 34.395 | 157 | 89 | 2 | 5 | 161 | 2 | 144 | 3.56e-28 | 102 |
| Msa0223050 | AT5G53300.1 | 34.395 | 157 | 89 | 2 | 5 | 161 | 2 | 144 | 3.56e-28 | 102 |
| Msa0223050 | AT4G27960.2 | 34.161 | 161 | 92 | 2 | 1 | 161 | 28 | 174 | 5.34e-28 | 103 |
| Msa0223050 | AT5G56150.1 | 33.121 | 157 | 91 | 2 | 5 | 161 | 2 | 144 | 7.18e-27 | 99.4 |
| Msa0223050 | AT5G41700.4 | 34.177 | 158 | 89 | 3 | 5 | 161 | 2 | 145 | 2.85e-26 | 97.8 |
| Msa0223050 | AT1G64230.3 | 32.727 | 165 | 90 | 2 | 5 | 161 | 2 | 153 | 9.18e-26 | 96.7 |
| Msa0223050 | AT2G16740.1 | 31.210 | 157 | 94 | 2 | 5 | 161 | 2 | 144 | 5.52e-24 | 91.7 |
| Msa0223050 | AT1G64230.5 | 35.000 | 120 | 65 | 1 | 33 | 152 | 71 | 177 | 1.98e-23 | 91.7 |
| Msa0223050 | AT1G64230.4 | 35.000 | 120 | 65 | 1 | 33 | 152 | 71 | 177 | 1.98e-23 | 91.7 |
| Msa0223050 | AT1G50490.1 | 35.878 | 131 | 70 | 2 | 30 | 160 | 60 | 176 | 2.89e-23 | 90.9 |
| Msa0223050 | AT5G25760.1 | 34.932 | 146 | 78 | 4 | 2 | 145 | 3 | 133 | 2.97e-23 | 90.1 |
| Msa0223050 | AT5G25760.2 | 34.932 | 146 | 78 | 4 | 2 | 145 | 3 | 133 | 2.97e-23 | 90.1 |
| Msa0223050 | AT1G16890.2 | 33.333 | 135 | 76 | 2 | 11 | 145 | 12 | 132 | 4.04e-23 | 89.7 |
| Msa0223050 | AT1G78870.2 | 33.333 | 135 | 76 | 2 | 11 | 145 | 12 | 132 | 5.45e-23 | 89.4 |
| Msa0223050 | AT3G20060.1 | 34.211 | 152 | 85 | 3 | 9 | 160 | 41 | 177 | 8.62e-23 | 89.7 |
| Msa0223050 | AT3G20060.2 | 34.351 | 131 | 72 | 2 | 30 | 160 | 16 | 132 | 3.97e-22 | 86.7 |
| Msa0223050 | AT5G41700.3 | 37.607 | 117 | 59 | 2 | 5 | 121 | 2 | 104 | 2.32e-21 | 85.1 |
| Msa0223050 | AT1G16890.3 | 34.127 | 126 | 69 | 2 | 20 | 145 | 30 | 141 | 4.05e-21 | 84.7 |
| Msa0223050 | AT3G57870.1 | 34.437 | 151 | 84 | 2 | 9 | 155 | 10 | 149 | 6.45e-21 | 84.3 |
| Msa0223050 | AT1G36340.2 | 35.606 | 132 | 71 | 2 | 24 | 155 | 27 | 144 | 6.84e-21 | 84.0 |
| Msa0223050 | AT1G36340.1 | 35.606 | 132 | 71 | 2 | 24 | 155 | 27 | 144 | 6.84e-21 | 84.0 |
| Msa0223050 | AT5G53300.3 | 37.069 | 116 | 59 | 2 | 4 | 119 | 1 | 102 | 1.34e-20 | 82.0 |
| Msa0223050 | AT1G16890.1 | 33.945 | 109 | 59 | 1 | 37 | 145 | 4 | 99 | 1.77e-20 | 82.0 |
| Msa0223050 | AT1G78870.4 | 33.945 | 109 | 59 | 1 | 37 | 145 | 4 | 99 | 1.81e-20 | 82.0 |
| Msa0223050 | AT3G24515.1 | 32.143 | 168 | 97 | 3 | 2 | 161 | 4 | 162 | 3.67e-20 | 86.3 |
| Msa0223050 | AT5G56150.2 | 34.483 | 116 | 62 | 2 | 5 | 120 | 2 | 103 | 3.98e-20 | 80.9 |
| Msa0223050 | AT1G78870.1 | 33.636 | 110 | 59 | 2 | 37 | 145 | 4 | 100 | 1.10e-18 | 77.4 |
| Msa0223050 | AT3G24515.3 | 32.558 | 129 | 78 | 2 | 33 | 161 | 68 | 187 | 1.49e-17 | 79.0 |
| Msa0223050 | AT5G50870.1 | 29.710 | 138 | 81 | 4 | 9 | 144 | 7 | 130 | 2.23e-17 | 75.9 |
| Msa0223050 | AT5G50870.2 | 29.927 | 137 | 80 | 4 | 9 | 143 | 7 | 129 | 7.59e-17 | 74.7 |
| Msa0223050 | AT3G13550.1 | 31.544 | 149 | 85 | 3 | 9 | 154 | 41 | 175 | 1.13e-16 | 73.6 |
| Msa0223050 | AT1G78870.3 | 31.304 | 115 | 65 | 2 | 11 | 125 | 12 | 112 | 1.50e-16 | 71.6 |
| Msa0223050 | AT3G13550.2 | 32.787 | 122 | 68 | 2 | 9 | 130 | 41 | 148 | 2.00e-14 | 67.4 |
| Msa0223050 | AT5G05080.2 | 27.586 | 145 | 91 | 2 | 9 | 153 | 15 | 145 | 4.07e-14 | 68.2 |
| Msa0223050 | AT5G05080.3 | 27.586 | 145 | 91 | 2 | 9 | 153 | 15 | 145 | 4.07e-14 | 68.2 |
| Msa0223050 | AT5G05080.1 | 27.586 | 145 | 91 | 2 | 9 | 153 | 15 | 145 | 4.07e-14 | 68.2 |
| Msa0223050 | AT5G05080.4 | 27.586 | 145 | 91 | 2 | 9 | 153 | 15 | 145 | 4.07e-14 | 68.2 |
| Msa0223050 | AT2G18600.1 | 28.571 | 133 | 81 | 2 | 31 | 163 | 57 | 175 | 4.27e-14 | 67.0 |
| Msa0223050 | AT2G18600.2 | 28.571 | 133 | 81 | 2 | 31 | 163 | 57 | 175 | 4.27e-14 | 67.0 |
| Msa0223050 | AT4G36800.2 | 29.661 | 118 | 70 | 1 | 42 | 159 | 66 | 170 | 6.84e-14 | 66.6 |
| Msa0223050 | AT4G36800.1 | 29.661 | 118 | 70 | 1 | 42 | 159 | 66 | 170 | 6.84e-14 | 66.6 |
| Msa0223050 | AT1G45050.1 | 30.973 | 113 | 62 | 3 | 9 | 120 | 20 | 117 | 1.11e-12 | 62.8 |
| Msa0223050 | AT1G63800.1 | 25.974 | 154 | 98 | 4 | 10 | 161 | 6 | 145 | 1.68e-12 | 62.8 |
| Msa0223050 | AT1G75440.1 | 30.833 | 120 | 67 | 3 | 1 | 119 | 12 | 116 | 1.84e-12 | 62.0 |
| Msa0223050 | AT5G42990.1 | 30.973 | 113 | 62 | 3 | 9 | 120 | 20 | 117 | 2.12e-12 | 62.0 |
| Msa0223050 | AT2G46030.5 | 27.273 | 154 | 96 | 4 | 10 | 161 | 6 | 145 | 2.72e-12 | 62.0 |
| Msa0223050 | AT2G46030.1 | 27.273 | 154 | 96 | 4 | 10 | 161 | 6 | 145 | 2.72e-12 | 62.0 |
| Msa0223050 | AT2G46030.4 | 30.709 | 127 | 73 | 3 | 37 | 161 | 35 | 148 | 2.80e-12 | 62.0 |
| Msa0223050 | AT2G46030.2 | 30.709 | 127 | 73 | 3 | 37 | 161 | 35 | 148 | 2.80e-12 | 62.0 |
| Msa0223050 | AT1G63800.2 | 28.906 | 128 | 76 | 3 | 36 | 161 | 16 | 130 | 5.23e-12 | 61.2 |
| Msa0223050 | AT2G46030.3 | 27.273 | 154 | 96 | 4 | 10 | 161 | 78 | 217 | 8.29e-12 | 62.0 |
| Msa0223050 | AT5G41340.1 | 28.906 | 128 | 76 | 3 | 36 | 161 | 31 | 145 | 9.22e-12 | 60.8 |
| Msa0223050 | AT3G17000.1 | 30.769 | 130 | 60 | 6 | 11 | 131 | 18 | 126 | 1.20e-11 | 62.0 |
| Msa0223050 | AT1G17280.4 | 29.861 | 144 | 78 | 6 | 1 | 137 | 1 | 128 | 2.43e-11 | 60.5 |
| Msa0223050 | AT1G45050.2 | 34.118 | 85 | 53 | 2 | 9 | 92 | 20 | 102 | 4.77e-11 | 57.4 |
| Msa0223050 | AT5G50430.1 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 7.04e-11 | 59.3 |
| Msa0223050 | AT5G50430.2 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 7.04e-11 | 59.3 |
| Msa0223050 | AT1G17280.9 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.75e-11 | 58.9 |
| Msa0223050 | AT1G17280.7 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.75e-11 | 58.9 |
| Msa0223050 | AT1G17280.6 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.75e-11 | 58.9 |
| Msa0223050 | AT1G17280.2 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.75e-11 | 58.9 |
| Msa0223050 | AT1G17280.5 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.75e-11 | 58.9 |
| Msa0223050 | AT1G17280.3 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.75e-11 | 58.9 |
| Msa0223050 | AT1G17280.1 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.75e-11 | 58.9 |
| Msa0223050 | AT1G17280.8 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.75e-11 | 58.9 |
Find 67 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATGGAGTGTAACCATAAT+TGG | 0.137403 | 2_1:+72533081 | Msa0223050:CDS |
| AACACTTGAGCCTAAATATT+TGG | 0.152712 | 2_1:+72532682 | None:intergenic |
| CTTTGCTAAAATTTGATATT+AGG | 0.200359 | 2_1:+72537533 | Msa0223050:three_prime_UTR |
| AGTATCATATCGATGCTTTC+TGG | 0.256685 | 2_1:+72535760 | Msa0223050:CDS |
| GAGAGACGATTTCAAGAAAA+AGG | 0.291595 | 2_1:+72537196 | Msa0223050:CDS |
| GCTTATACAATATTATGATA+TGG | 0.305572 | 2_1:+72537574 | Msa0223050:three_prime_UTR |
| TGTATCTGGTGGCCCAATTA+TGG | 0.313031 | 2_1:-72533094 | None:intergenic |
| TTCACTGATGGTGGACTGTT+TGG | 0.316044 | 2_1:-72534515 | None:intergenic |
| AGAACTTACTAAAGTGTATC+TGG | 0.332749 | 2_1:-72533108 | None:intergenic |
| AGGCCATGAAAGAGTGAGTT+TGG | 0.346682 | 2_1:-72532871 | None:intergenic |
| CTTGCAAGCTCATAACCATT+TGG | 0.354028 | 2_1:-72534862 | None:intergenic |
| TTTGCCGGAGATTCATCATT+AGG | 0.355777 | 2_1:-72535784 | None:intergenic |
| ATAAATGCAACCAAATATTT+AGG | 0.361844 | 2_1:-72532692 | None:intergenic |
| ACTGCAGCTTCAACATTTGC+CGG | 0.368423 | 2_1:-72535799 | None:intergenic |
| TTTGAAGGAGGAGGCTTGCT+TGG | 0.372918 | 2_1:-72532895 | None:intergenic |
| TCTCCAAACTCACTCTTTCA+TGG | 0.373541 | 2_1:+72532868 | Msa0223050:exon |
| ATATCTATTCTTCATCCTCC+TGG | 0.379234 | 2_1:+72534832 | Msa0223050:CDS |
| CTACACAGATCAACGGTAAC+AGG | 0.379251 | 2_1:-72537328 | None:intergenic |
| TTGAAGGAGGAGGCTTGCTT+GGG | 0.393797 | 2_1:-72532894 | None:intergenic |
| CGATTTAATTCATGTCGATC+AGG | 0.399192 | 2_1:-72532734 | None:intergenic |
| TGCAGAAGGAGTGGAGAGAC+AGG | 0.411818 | 2_1:+72537174 | Msa0223050:intron |
| TGAAGTTCACTTCAGAGATA+TGG | 0.412336 | 2_1:+72534534 | Msa0223050:CDS |
| TTGCAAGCTCATAACCATTT+GGG | 0.423493 | 2_1:-72534861 | None:intergenic |
| CATAATATTGTATAAGCAAA+AGG | 0.430377 | 2_1:-72537568 | None:intergenic |
| GGCAATTATACCAGTAAAGA+AGG | 0.436226 | 2_1:-72537624 | None:intergenic |
| GATATGCAAACCCGCCCATC+AGG | 0.446681 | 2_1:-72534814 | None:intergenic |
| TATCTATTCTTCATCCTCCT+GGG | 0.449275 | 2_1:+72534833 | Msa0223050:CDS |
| AATGGAGTGTAACCATAATT+GGG | 0.465426 | 2_1:+72533082 | Msa0223050:CDS |
| GATCTGTGTAGACTTGCTAT+TGG | 0.465836 | 2_1:+72537340 | Msa0223050:three_prime_UTR |
| AAGGAGGAGGCTTGCTTGGG+AGG | 0.498537 | 2_1:-72532891 | None:intergenic |
| ATACAACTTAATGTAAGGAT+TGG | 0.511298 | 2_1:+72537301 | Msa0223050:three_prime_UTR |
| AGAACATACAACTTAATGTA+AGG | 0.513455 | 2_1:+72537296 | Msa0223050:three_prime_UTR |
| GTATTTGCAGTATATCCTGA+TGG | 0.513643 | 2_1:+72534799 | Msa0223050:intron |
| TGGTCCTAATGATGAATCTC+CGG | 0.517026 | 2_1:+72535780 | Msa0223050:CDS |
| TTGTTGTATTCTTCTCTACA+TGG | 0.521579 | 2_1:+72537399 | Msa0223050:three_prime_UTR |
| CCTCCTGGGGATGACCCAAA+TGG | 0.528218 | 2_1:+72534847 | Msa0223050:CDS |
| TATAAGCAAAAGGCAAAACT+TGG | 0.530566 | 2_1:-72537558 | None:intergenic |
| TAACCATTTGGGTCATCCCC+AGG | 0.531119 | 2_1:-72534850 | None:intergenic |
| ATGAGCTTGCAAGTGAGCGC+TGG | 0.535537 | 2_1:+72534872 | Msa0223050:CDS |
| TGCAGTATATCCTGATGGGC+GGG | 0.538018 | 2_1:+72534804 | Msa0223050:intron |
| TATTTGCAGTATATCCTGAT+GGG | 0.549933 | 2_1:+72534800 | Msa0223050:intron |
| TCAATTTCTTGTAGTGAAGG+AGG | 0.560751 | 2_1:+72534455 | Msa0223050:intron |
| CCAGCGGAAAAGCCATCGAC+GGG | 0.566293 | 2_1:-72533033 | None:intergenic |
| GAAATGTTGTGATTCACAGC+CGG | 0.566809 | 2_1:+72537245 | Msa0223050:exon |
| TTGCAGTATATCCTGATGGG+CGG | 0.572889 | 2_1:+72534803 | Msa0223050:intron |
| CATACAAATAATCGAAGTGT+GGG | 0.573196 | 2_1:+72532779 | Msa0223050:five_prime_UTR |
| TGTTTATATTGCAGAAGGAG+TGG | 0.573707 | 2_1:+72537165 | Msa0223050:intron |
| CTTTGTAAACATCCCGTCGA+TGG | 0.573847 | 2_1:+72533021 | Msa0223050:CDS |
| ATCTATTCTTCATCCTCCTG+GGG | 0.574309 | 2_1:+72534834 | Msa0223050:CDS |
| AATAGCAAGATACGAGGGGC+CGG | 0.579649 | 2_1:-72537264 | None:intergenic |
| ACATACAAATAATCGAAGTG+TGG | 0.584409 | 2_1:+72532778 | Msa0223050:five_prime_UTR |
| CCGATGTGTGCGGAAGTCAC+AGG | 0.588338 | 2_1:+72537223 | Msa0223050:CDS |
| GAAGTGAACTTCACTGATGG+TGG | 0.596810 | 2_1:-72534524 | None:intergenic |
| ACCAGCGGAAAAGCCATCGA+CGG | 0.610363 | 2_1:-72533034 | None:intergenic |
| GGACTGTTTGGATAGTTCGA+CGG | 0.629490 | 2_1:-72534503 | None:intergenic |
| GTTCGACGGAAAGCTCATGA+TGG | 0.632587 | 2_1:-72534489 | None:intergenic |
| TTCACAATAGCAAGATACGA+GGG | 0.635127 | 2_1:-72537269 | None:intergenic |
| AGCAAGTCTACACAGATCAA+CGG | 0.641649 | 2_1:-72537335 | None:intergenic |
| TCAGAGATATGGCATCCCAA+TGG | 0.645768 | 2_1:+72534545 | Msa0223050:CDS |
| CCTGTGACTTCCGCACACAT+CGG | 0.655883 | 2_1:-72537223 | None:intergenic |
| TCTGAAGTGAACTTCACTGA+TGG | 0.656247 | 2_1:-72534527 | None:intergenic |
| CTTCACAATAGCAAGATACG+AGG | 0.673362 | 2_1:-72537270 | None:intergenic |
| AAAAGGTTAGCCGATGTGTG+CGG | 0.675247 | 2_1:+72537213 | Msa0223050:CDS |
| ACTTACTAAAGTGTATCTGG+TGG | 0.687155 | 2_1:-72533105 | None:intergenic |
| GGTTTCGTCGACTAAACCAG+CGG | 0.711029 | 2_1:-72533049 | None:intergenic |
| CCATTTGGGTCATCCCCAGG+AGG | 0.711844 | 2_1:-72534847 | None:intergenic |
| TCACAATAGCAAGATACGAG+GGG | 0.727949 | 2_1:-72537268 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATGTTTATTTTATTTTCAA+TGG | + | chr2_1:72533773-72533792 | Msa0223050:intron | 10.0% |
| !! | TTAATAAGTTAAAAAGAAAT+TGG | + | chr2_1:72535346-72535365 | Msa0223050:intron | 10.0% |
| !!! | TTTTAATTTATACTTATTGG+TGG | + | chr2_1:72533271-72533290 | Msa0223050:intron | 15.0% |
| !!! | TTTAATTTATACTTATTGGT+GGG | + | chr2_1:72533272-72533291 | Msa0223050:intron | 15.0% |
| !! | AAATATCATAATCAATAAAC+CGG | - | chr2_1:72533829-72533848 | None:intergenic | 15.0% |
| !! | TTGATTATGATATTTATTCT+AGG | + | chr2_1:72533834-72533853 | Msa0223050:intron | 15.0% |
| !! | AAATAAACGAATTGAATTTA+TGG | - | chr2_1:72534931-72534950 | None:intergenic | 15.0% |
| !!! | ATTTTAAAAAAATTGGTCAT+CGG | - | chr2_1:72535327-72535346 | None:intergenic | 15.0% |
| !! | ATTAAATCGTTATGTTAAAA+AGG | - | chr2_1:72535525-72535544 | None:intergenic | 15.0% |
| !! | AATCATGTAAATAAGAAAAA+AGG | - | chr2_1:72535833-72535852 | None:intergenic | 15.0% |
| !! | TAATATCAATATAGTAGTTT+AGG | + | chr2_1:72536268-72536287 | Msa0223050:intron | 15.0% |
| !! | CTTATGTAATGATCATTTAT+TGG | + | chr2_1:72533204-72533223 | Msa0223050:intron | 20.0% |
| !! | GATAAAAAGAATACAGATTA+TGG | + | chr2_1:72533422-72533441 | Msa0223050:intron | 20.0% |
| !!! | ATAAGTTTTTTGAGACTATT+CGG | - | chr2_1:72533725-72533744 | None:intergenic | 20.0% |
| !! | AAAACTTATACCAGTTTATA+AGG | + | chr2_1:72533736-72533755 | Msa0223050:intron | 20.0% |
| !!! | TTTTATTTGACCTTATAAAC+TGG | - | chr2_1:72533749-72533768 | None:intergenic | 20.0% |
| !! | AATATCATAATCAATAAACC+GGG | - | chr2_1:72533828-72533847 | None:intergenic | 20.0% |
| !!! | TTTATTCTAGGTTTTTTTGT+TGG | + | chr2_1:72533846-72533865 | Msa0223050:intron | 20.0% |
| !! | ATTAATTTACTTCCTATGAT+TGG | + | chr2_1:72533947-72533966 | Msa0223050:intron | 20.0% |
| !! | TTATTCATAAGCAAATAAAC+AGG | - | chr2_1:72535699-72535718 | None:intergenic | 20.0% |
| !! | ACAATTATCTAGATCAATAT+CGG | - | chr2_1:72535924-72535943 | None:intergenic | 20.0% |
| !!! | GTTTTACTAAGAATATGTTA+TGG | + | chr2_1:72535955-72535974 | Msa0223050:intron | 20.0% |
| !!! | AGTGTTTTACTAGTAAATAA+AGG | - | chr2_1:72535989-72536008 | None:intergenic | 20.0% |
| !! | GAGATATCTACATAAATAAT+TGG | - | chr2_1:72536045-72536064 | None:intergenic | 20.0% |
| !!! | TGGTTTTAATATTTTCTTGT+GGG | - | chr2_1:72536508-72536527 | None:intergenic | 20.0% |
| !! | TTAAGAAAGCTATAAAAAAC+AGG | - | chr2_1:72536787-72536806 | None:intergenic | 20.0% |
| !!! | CTAATATCAAATTTTAGCAA+AGG | - | chr2_1:72537535-72537554 | None:intergenic | 20.0% |
| !! | CTTTGCTAAAATTTGATATT+AGG | + | chr2_1:72537533-72537552 | Msa0223050:three_prime_UTR | 20.0% |
| !! | CATAATATTGTATAAGCAAA+AGG | - | chr2_1:72537571-72537590 | None:intergenic | 20.0% |
| !! | GCTTATACAATATTATGATA+TGG | + | chr2_1:72537574-72537593 | Msa0223050:three_prime_UTR | 20.0% |
| ! | TAAGCGATGAAATGAAAAAA+GGG | - | chr2_1:72532943-72532962 | None:intergenic | 25.0% |
| ! | ATAAGCGATGAAATGAAAAA+AGG | - | chr2_1:72532944-72532963 | None:intergenic | 25.0% |
| !! | ATTTATTGGATTTTCTGTGA+TGG | + | chr2_1:72533218-72533237 | Msa0223050:intron | 25.0% |
| !! | TTTATTGGATTTTCTGTGAT+GGG | + | chr2_1:72533219-72533238 | Msa0223050:intron | 25.0% |
| !! | ATTGATGATATTGTTTCATG+AGG | + | chr2_1:72533356-72533375 | Msa0223050:intron | 25.0% |
| ! | GTAAAAGAAGTGATATTTGA+AGG | + | chr2_1:72533396-72533415 | Msa0223050:intron | 25.0% |
| ! | ATAAGTTGTTTATCCAAACA+GGG | - | chr2_1:72533448-72533467 | None:intergenic | 25.0% |
| ! | TATAAGTTGTTTATCCAAAC+AGG | - | chr2_1:72533449-72533468 | None:intergenic | 25.0% |
| !!! | TAAGTTTTTTGAGACTATTC+GGG | - | chr2_1:72533724-72533743 | None:intergenic | 25.0% |
| ! | TAGGAAGTAAATTAATGATG+AGG | - | chr2_1:72533943-72533962 | None:intergenic | 25.0% |
| ! | GATGAAGTAAATTAATGATG+AGG | - | chr2_1:72534131-72534150 | None:intergenic | 25.0% |
| ! | ATTAATTTACTTCATCCGAT+TGG | + | chr2_1:72534135-72534154 | Msa0223050:intron | 25.0% |
| ! | GATGAAGTAAATTAATGATG+AGG | - | chr2_1:72534131-72534150 | None:intergenic | 25.0% |
| ! | ATTAATTTACTTCATCCGAT+TGG | + | chr2_1:72534135-72534154 | Msa0223050:intron | 25.0% |
| !!! | GTAACATCCTATGTTTTTTA+AGG | + | chr2_1:72534650-72534669 | Msa0223050:intron | 25.0% |
| ! | TGTTGTTCCTTAAAAAACAT+AGG | - | chr2_1:72534660-72534679 | None:intergenic | 25.0% |
| ! | GACATTTCTTTGATTAAAAC+AGG | + | chr2_1:72534753-72534772 | Msa0223050:intron | 25.0% |
| ! | CATTATTCAATTGATATTGC+TGG | + | chr2_1:72534973-72534992 | Msa0223050:intron | 25.0% |
| ! | TAGATGCAAAATACTTGTAA+AGG | + | chr2_1:72535110-72535129 | Msa0223050:intron | 25.0% |
| ! | TAACACTTAAATTAGCTGTA+AGG | - | chr2_1:72535549-72535568 | None:intergenic | 25.0% |
| ! | TAAGTATAAAAAGAGAAGTG+TGG | - | chr2_1:72535874-72535893 | None:intergenic | 25.0% |
| !!! | TGATACGTTGATAATAACTA+CGG | + | chr2_1:72536097-72536116 | Msa0223050:intron | 25.0% |
| !!! | GTGGTTTTAATATTTTCTTG+TGG | - | chr2_1:72536509-72536528 | None:intergenic | 25.0% |
| ! | CTACTAGTAGTTATTATCAA+CGG | + | chr2_1:72536731-72536750 | Msa0223050:intron | 25.0% |
| ! | AAAAACAGGCAAAAGATATT+AGG | - | chr2_1:72536773-72536792 | None:intergenic | 25.0% |
| ! | ATGTGTAGTATTAGGAATTT+AGG | + | chr2_1:72536895-72536914 | Msa0223050:intron | 25.0% |
| ! | TACTATACACTGTATCAATT+AGG | - | chr2_1:72537089-72537108 | None:intergenic | 25.0% |
| ! | AGAACATACAACTTAATGTA+AGG | + | chr2_1:72537296-72537315 | Msa0223050:three_prime_UTR | 25.0% |
| ! | ATACAACTTAATGTAAGGAT+TGG | + | chr2_1:72537301-72537320 | Msa0223050:three_prime_UTR | 25.0% |
| !! | AAATGTATTCTACGTGTTTT+TGG | + | chr2_1:72537453-72537472 | Msa0223050:three_prime_UTR | 25.0% |
| ! | AAATAATATGCCAGCAAAAA+TGG | - | chr2_1:72537648-72537667 | None:intergenic | 25.0% |
| ACATACAAATAATCGAAGTG+TGG | + | chr2_1:72532778-72532797 | Msa0223050:five_prime_UTR | 30.0% | |
| CATACAAATAATCGAAGTGT+GGG | + | chr2_1:72532779-72532798 | Msa0223050:five_prime_UTR | 30.0% | |
| GTAAGGTTAATCAGAAATAG+CGG | - | chr2_1:72532987-72533006 | None:intergenic | 30.0% | |
| AAGATCTGTGAGAAAAAGTA+AGG | - | chr2_1:72533004-72533023 | None:intergenic | 30.0% | |
| ! | ACGAAACCAACATTTTTGAA+TGG | + | chr2_1:72533064-72533083 | Msa0223050:CDS | 30.0% |
| TACACTCCATTCAAAAATGT+TGG | - | chr2_1:72533073-72533092 | None:intergenic | 30.0% | |
| AATGGAGTGTAACCATAATT+GGG | + | chr2_1:72533082-72533101 | Msa0223050:CDS | 30.0% | |
| AGAACTTACTAAAGTGTATC+TGG | - | chr2_1:72533111-72533130 | None:intergenic | 30.0% | |
| ! | TTATTGGATTTTCTGTGATG+GGG | + | chr2_1:72533220-72533239 | Msa0223050:intron | 30.0% |
| !! | TTTTCAGAGTTTGGTTCAAT+TGG | + | chr2_1:72533295-72533314 | Msa0223050:intron | 30.0% |
| !! | AAAGTTTTGATAAGCTATCC+TGG | + | chr2_1:72533633-72533652 | Msa0223050:intron | 30.0% |
| CTTATATTCATAACTTCTCC+AGG | - | chr2_1:72533654-72533673 | None:intergenic | 30.0% | |
| TGCAAATTATTATGCTTTCC+CGG | + | chr2_1:72533807-72533826 | Msa0223050:intron | 30.0% | |
| TTGGTTTCATTTATTTGCAC+TGG | + | chr2_1:72533865-72533884 | Msa0223050:intron | 30.0% | |
| TTTACTTCCTATGATTGGAT+TGG | + | chr2_1:72533952-72533971 | Msa0223050:intron | 30.0% | |
| AAACAAATAAGCTGAGTAGT+TGG | - | chr2_1:72534049-72534068 | None:intergenic | 30.0% | |
| AAACAAATAAGCTGAGTAGT+TGG | - | chr2_1:72534049-72534068 | None:intergenic | 30.0% | |
| AATTCCAAAACCAATCCAAT+CGG | - | chr2_1:72534341-72534360 | None:intergenic | 30.0% | |
| CTTTCAATTTCTTGTAGTGA+AGG | + | chr2_1:72534452-72534471 | Msa0223050:intron | 30.0% | |
| TATTTGCAGTATATCCTGAT+GGG | + | chr2_1:72534800-72534819 | Msa0223050:intron | 30.0% | |
| GAGCATGCTTGTATTTAATA+GGG | + | chr2_1:72535051-72535070 | Msa0223050:intron | 30.0% | |
| GTGATCATAACAAAAGTTGT+GGG | + | chr2_1:72535207-72535226 | Msa0223050:intron | 30.0% | |
| !! | AGATACTCTAAAATGAGTGA+TGG | - | chr2_1:72535422-72535441 | None:intergenic | 30.0% |
| !!! | ATCACTCATTTTAGAGTATC+TGG | + | chr2_1:72535421-72535440 | Msa0223050:intron | 30.0% |
| TTAAACAACAAGTCTATAGC+AGG | - | chr2_1:72535491-72535510 | None:intergenic | 30.0% | |
| ATAACTTTACTGAATGTCCT+TGG | + | chr2_1:72535604-72535623 | Msa0223050:intron | 30.0% | |
| TAACTTTACTGAATGTCCTT+GGG | + | chr2_1:72535605-72535624 | Msa0223050:intron | 30.0% | |
| TGATCTAGATAATTGTGCAA+AGG | + | chr2_1:72535928-72535947 | Msa0223050:intron | 30.0% | |
| CTAAGAATATGTTATGGACT+TGG | + | chr2_1:72535961-72535980 | Msa0223050:intron | 30.0% | |
| ATAATGAGTAGATACGAAAG+TGG | + | chr2_1:72536183-72536202 | Msa0223050:intron | 30.0% | |
| TAATGAGTAGATACGAAAGT+GGG | + | chr2_1:72536184-72536203 | Msa0223050:intron | 30.0% | |
| TAGTTTAGGCATTACTCTTT+AGG | + | chr2_1:72536282-72536301 | Msa0223050:intron | 30.0% | |
| !!! | TATGAGAATGCTTTTTCTCT+TGG | + | chr2_1:72536355-72536374 | Msa0223050:intron | 30.0% |
| ! | ATTCAAAGTATTCAAGACGT+GGG | - | chr2_1:72536548-72536567 | None:intergenic | 30.0% |
| ! | TATTCAAAGTATTCAAGACG+TGG | - | chr2_1:72536549-72536568 | None:intergenic | 30.0% |
| GTGTTAAACTAGTAACTACT+AGG | + | chr2_1:72536662-72536681 | Msa0223050:intron | 30.0% | |
| !!! | CTCTGTTTTAAGATTCCTTT+CGG | + | chr2_1:72536834-72536853 | Msa0223050:intron | 30.0% |
| CAACACTAATAGTGACAATT+GGG | - | chr2_1:72536923-72536942 | None:intergenic | 30.0% | |
| ACAACACTAATAGTGACAAT+TGG | - | chr2_1:72536924-72536943 | None:intergenic | 30.0% | |
| ACTATTAGTGTTGTCAATTG+TGG | + | chr2_1:72536930-72536949 | Msa0223050:intron | 30.0% | |
| !!! | GTTGAACAAACAGCTTTTTT+CGG | - | chr2_1:72536960-72536979 | None:intergenic | 30.0% |
| !! | GACAGTTTGGAATATTGTTT+TGG | + | chr2_1:72537119-72537138 | Msa0223050:intron | 30.0% |
| TGTGATGTTTATATTGCAGA+AGG | + | chr2_1:72537160-72537179 | Msa0223050:intron | 30.0% | |
| TTGTTGTATTCTTCTCTACA+TGG | + | chr2_1:72537399-72537418 | Msa0223050:three_prime_UTR | 30.0% | |
| TATAAGCAAAAGGCAAAACT+TGG | - | chr2_1:72537561-72537580 | None:intergenic | 30.0% | |
| ! | TATCATTTTGCCTTCTTTAC+TGG | + | chr2_1:72537614-72537633 | Msa0223050:three_prime_UTR | 30.0% |
| CGATTTAATTCATGTCGATC+AGG | - | chr2_1:72532737-72532756 | None:intergenic | 35.0% | |
| !!! | TACCTTTGAGCTGTTTTTGA+AGG | - | chr2_1:72532913-72532932 | None:intergenic | 35.0% |
| GAATGGAGTGTAACCATAAT+TGG | + | chr2_1:72533081-72533100 | Msa0223050:CDS | 35.0% | |
| ACTTACTAAAGTGTATCTGG+TGG | - | chr2_1:72533108-72533127 | None:intergenic | 35.0% | |
| ! | ACTGGATTTTCATTAGCTGT+AGG | + | chr2_1:72533883-72533902 | Msa0223050:intron | 35.0% |
| !!! | TCCTATGATTGGATTGGTTT+TGG | + | chr2_1:72533958-72533977 | Msa0223050:intron | 35.0% |
| TCCAAAACCAATCCAATCAT+AGG | - | chr2_1:72533962-72533981 | None:intergenic | 35.0% | |
| TTTACTTCATCCGATTGGAT+TGG | + | chr2_1:72534140-72534159 | Msa0223050:intron | 35.0% | |
| AAGTCCAAAACCAATCCAAT+CGG | - | chr2_1:72533965-72533984 | None:intergenic | 35.0% | |
| ! | ACTGAATTTTCCTTAGCTGT+AGG | + | chr2_1:72534259-72534278 | Msa0223050:intron | 35.0% |
| TTTACTTCATCCGATTGGAT+TGG | + | chr2_1:72534140-72534159 | Msa0223050:intron | 35.0% | |
| TGACAAACAAATAAGCTGAG+TGG | - | chr2_1:72534429-72534448 | None:intergenic | 35.0% | |
| TCAATTTCTTGTAGTGAAGG+AGG | + | chr2_1:72534455-72534474 | Msa0223050:intron | 35.0% | |
| TGAAGTTCACTTCAGAGATA+TGG | + | chr2_1:72534534-72534553 | Msa0223050:CDS | 35.0% | |
| ATAGGATGTTACTGCAATAC+GGG | - | chr2_1:72534642-72534661 | None:intergenic | 35.0% | |
| CATAGGATGTTACTGCAATA+CGG | - | chr2_1:72534643-72534662 | None:intergenic | 35.0% | |
| TGAGAAAATCCAATGATGCA+CGG | - | chr2_1:72534728-72534747 | None:intergenic | 35.0% | |
| GTATTTGCAGTATATCCTGA+TGG | + | chr2_1:72534799-72534818 | Msa0223050:intron | 35.0% | |
| ATATCTATTCTTCATCCTCC+TGG | + | chr2_1:72534832-72534851 | Msa0223050:CDS | 35.0% | |
| TATCTATTCTTCATCCTCCT+GGG | + | chr2_1:72534833-72534852 | Msa0223050:CDS | 35.0% | |
| TTGCAAGCTCATAACCATTT+GGG | - | chr2_1:72534864-72534883 | None:intergenic | 35.0% | |
| ! | TTTTCACGTACTGTATGAAC+AGG | - | chr2_1:72534901-72534920 | None:intergenic | 35.0% |
| CGAGCATGCTTGTATTTAAT+AGG | + | chr2_1:72535050-72535069 | Msa0223050:intron | 35.0% | |
| CGTGATCATAACAAAAGTTG+TGG | + | chr2_1:72535206-72535225 | Msa0223050:intron | 35.0% | |
| !! | ACTCTAAAATGAGTGATGGT+CGG | - | chr2_1:72535418-72535437 | None:intergenic | 35.0% |
| CTATAGCAGGTAAACATTAC+AGG | - | chr2_1:72535478-72535497 | None:intergenic | 35.0% | |
| !! | TAGACTTGTTGTTTAAGACC+TGG | + | chr2_1:72535495-72535514 | Msa0223050:intron | 35.0% |
| TTATGTTAAAAAGGCAAGCC+AGG | - | chr2_1:72535516-72535535 | None:intergenic | 35.0% | |
| CAAGTATGTCAAAACACTCA+TGG | - | chr2_1:72535655-72535674 | None:intergenic | 35.0% | |
| AGTATCATATCGATGCTTTC+TGG | + | chr2_1:72535760-72535779 | Msa0223050:CDS | 35.0% | |
| CTAGTAAAACACTATGTCCT+TGG | + | chr2_1:72535996-72536015 | Msa0223050:intron | 35.0% | |
| TGTAGCATTAAAGCAATCCA+AGG | - | chr2_1:72536016-72536035 | None:intergenic | 35.0% | |
| TCGCTCATAAAACTCAAACT+TGG | - | chr2_1:72536226-72536245 | None:intergenic | 35.0% | |
| !!! | GTGTCGAGTGTTTTTTTGAA+GGG | - | chr2_1:72536443-72536462 | None:intergenic | 35.0% |
| ! | TTTTCTTGTGGGACTAAGTT+GGG | - | chr2_1:72536497-72536516 | None:intergenic | 35.0% |
| ! | ATTTTCTTGTGGGACTAAGT+TGG | - | chr2_1:72536498-72536517 | None:intergenic | 35.0% |
| ATGTCCATACTGATAATACG+TGG | + | chr2_1:72536686-72536705 | Msa0223050:intron | 35.0% | |
| CATTCCACGTATTATCAGTA+TGG | - | chr2_1:72536693-72536712 | None:intergenic | 35.0% | |
| CGAAAGGAATCTTAAAACAG+AGG | - | chr2_1:72536836-72536855 | None:intergenic | 35.0% | |
| !!! | TGTGTCATTTTGAGTACTGA+AGG | + | chr2_1:72536987-72537006 | Msa0223050:intron | 35.0% |
| !!! | AATGTGTACTTTTAGGACAG+AGG | - | chr2_1:72537052-72537071 | None:intergenic | 35.0% |
| ! | CAACAGCAATGTGTACTTTT+AGG | - | chr2_1:72537059-72537078 | None:intergenic | 35.0% |
| GTACTTCAATCTTGACAGTT+TGG | + | chr2_1:72537106-72537125 | Msa0223050:intron | 35.0% | |
| CTGCAATATAAACATCACAC+AGG | - | chr2_1:72537159-72537178 | None:intergenic | 35.0% | |
| TGTTTATATTGCAGAAGGAG+TGG | + | chr2_1:72537165-72537184 | Msa0223050:intron | 35.0% | |
| GAGAGACGATTTCAAGAAAA+AGG | + | chr2_1:72537196-72537215 | Msa0223050:CDS | 35.0% | |
| TTCACAATAGCAAGATACGA+GGG | - | chr2_1:72537272-72537291 | None:intergenic | 35.0% | |
| !!! | GTGTTTTTGGCTAGTGTTTT+GGG | + | chr2_1:72537466-72537485 | Msa0223050:three_prime_UTR | 35.0% |
| !!! | TGTTTTTGGCTAGTGTTTTG+GGG | + | chr2_1:72537467-72537486 | Msa0223050:three_prime_UTR | 35.0% |
| GGCAATTATACCAGTAAAGA+AGG | - | chr2_1:72537627-72537646 | None:intergenic | 35.0% | |
| !!! | GGTATAATTGCCATTTTTGC+TGG | + | chr2_1:72537635-72537654 | Msa0223050:three_prime_UTR | 35.0% |
| TCTCCAAACTCACTCTTTCA+TGG | + | chr2_1:72532868-72532887 | Msa0223050:exon | 40.0% | |
| !!! | CTTTGAGCTGTTTTTGAAGG+AGG | - | chr2_1:72532910-72532929 | None:intergenic | 40.0% |
| CTCCTTCAAAAACAGCTCAA+AGG | + | chr2_1:72532908-72532927 | Msa0223050:CDS | 40.0% | |
| !! | GATTTTCTGTGATGGGGTTT+TGG | + | chr2_1:72533226-72533245 | Msa0223050:intron | 40.0% |
| !!! | ATTGGTGGGTTTTCAGAGTT+TGG | + | chr2_1:72533286-72533305 | Msa0223050:intron | 40.0% |
| ! | CAGAGTTTGGTTCAATTGGT+TGG | + | chr2_1:72533299-72533318 | Msa0223050:intron | 40.0% |
| ATACAGATTATGGCCCTGTT+TGG | + | chr2_1:72533432-72533451 | Msa0223050:intron | 40.0% | |
| CTCAGCTTATTTGTTTGCAC+TGG | + | chr2_1:72534053-72534072 | Msa0223050:intron | 40.0% | |
| ! | ACTGGATTTTCCTTAGCTGT+AGG | + | chr2_1:72534071-72534090 | Msa0223050:intron | 40.0% |
| ACAAGCAAATCCTACAGCTA+AGG | - | chr2_1:72534084-72534103 | None:intergenic | 40.0% | |
| !!! | TCATCCGATTGGATTGGTTT+TGG | + | chr2_1:72534146-72534165 | Msa0223050:intron | 40.0% |
| ACAAGCAAATCCTACAGCTA+AGG | - | chr2_1:72534084-72534103 | None:intergenic | 40.0% | |
| !!! | TCATCCGATTGGATTGGTTT+TGG | + | chr2_1:72534146-72534165 | Msa0223050:intron | 40.0% |
| ! | TCTGAAGTGAACTTCACTGA+TGG | - | chr2_1:72534530-72534549 | None:intergenic | 40.0% |
| CAGAGAGAAAACCAACCATT+GGG | - | chr2_1:72534563-72534582 | None:intergenic | 40.0% | |
| TCAGAGAGAAAACCAACCAT+TGG | - | chr2_1:72534564-72534583 | None:intergenic | 40.0% | |
| ATCTATTCTTCATCCTCCTG+GGG | + | chr2_1:72534834-72534853 | Msa0223050:CDS | 40.0% | |
| CTTGCAAGCTCATAACCATT+TGG | - | chr2_1:72534865-72534884 | None:intergenic | 40.0% | |
| !! | TGGGCTTTTCTTTGTTTACG+AGG | + | chr2_1:72535226-72535245 | Msa0223050:intron | 40.0% |
| !! | GGGCTTTTCTTTGTTTACGA+GGG | + | chr2_1:72535227-72535246 | Msa0223050:intron | 40.0% |
| AAATTGGTCATCGGATACGT+TGG | - | chr2_1:72535318-72535337 | None:intergenic | 40.0% | |
| !! | TATGCATCCAAGAGTATCCT+AGG | + | chr2_1:72535381-72535400 | Msa0223050:intron | 40.0% |
| TGATACTCCTAGGATACTCT+TGG | - | chr2_1:72535391-72535410 | None:intergenic | 40.0% | |
| TACTGAATGTCCTTGGGATA+TGG | + | chr2_1:72535611-72535630 | Msa0223050:intron | 40.0% | |
| GTATGTCAAAACACTCATGG+TGG | - | chr2_1:72535652-72535671 | None:intergenic | 40.0% | |
| TGGTCCTAATGATGAATCTC+CGG | + | chr2_1:72535780-72535799 | Msa0223050:CDS | 40.0% | |
| TTTGCCGGAGATTCATCATT+AGG | - | chr2_1:72535787-72535806 | None:intergenic | 40.0% | |
| ! | AAAGAGAAGTGTGGTGAAGA+TGG | - | chr2_1:72535865-72535884 | None:intergenic | 40.0% |
| TTTGCGTCCTAGAGAAGTAA+AGG | + | chr2_1:72535894-72535913 | Msa0223050:intron | 40.0% | |
| !!! | TGCTTTTTCTCTTGGCATGT+TGG | + | chr2_1:72536363-72536382 | Msa0223050:intron | 40.0% |
| !!! | TGTTTTTTTGAAGGGTGGGA+GGG | - | chr2_1:72536435-72536454 | None:intergenic | 40.0% |
| !!! | CGAGTGTTTTTTTGAAGGGT+GGG | - | chr2_1:72536439-72536458 | None:intergenic | 40.0% |
| !!! | TCGAGTGTTTTTTTGAAGGG+TGG | - | chr2_1:72536440-72536459 | None:intergenic | 40.0% |
| !!! | GGTGTCGAGTGTTTTTTTGA+AGG | - | chr2_1:72536444-72536463 | None:intergenic | 40.0% |
| ! | GATTTTCATCCCTGAACTTG+TGG | - | chr2_1:72536475-72536494 | None:intergenic | 40.0% |
| ! | AGTATTCAAGACGTGGGTTA+GGG | - | chr2_1:72536542-72536561 | None:intergenic | 40.0% |
| AAGTATTCAAGACGTGGGTT+AGG | - | chr2_1:72536543-72536562 | None:intergenic | 40.0% | |
| GTGGAATGTCTTGTATGCAA+AGG | + | chr2_1:72536705-72536724 | Msa0223050:intron | 40.0% | |
| AGATATTAGGCGCTAAGTTC+TGG | - | chr2_1:72536760-72536779 | None:intergenic | 40.0% | |
| !!! | TTTTAAGATTCCTTTCGGCC+AGG | + | chr2_1:72536839-72536858 | Msa0223050:intron | 40.0% |
| TCTATTGAGATCCCTACAGT+TGG | + | chr2_1:72536866-72536885 | Msa0223050:intron | 40.0% | |
| GAAATGTTGTGATTCACAGC+CGG | + | chr2_1:72537245-72537264 | Msa0223050:exon | 40.0% | |
| TCACAATAGCAAGATACGAG+GGG | - | chr2_1:72537271-72537290 | None:intergenic | 40.0% | |
| CTTCACAATAGCAAGATACG+AGG | - | chr2_1:72537273-72537292 | None:intergenic | 40.0% | |
| AGCAAGTCTACACAGATCAA+CGG | - | chr2_1:72537338-72537357 | None:intergenic | 40.0% | |
| !! | GATCTGTGTAGACTTGCTAT+TGG | + | chr2_1:72537340-72537359 | Msa0223050:three_prime_UTR | 40.0% |
| !!! | CGTGTTTTTGGCTAGTGTTT+TGG | + | chr2_1:72537465-72537484 | Msa0223050:three_prime_UTR | 40.0% |
| !!! | GTTTTTGGCTAGTGTTTTGG+GGG | + | chr2_1:72537468-72537487 | Msa0223050:three_prime_UTR | 40.0% |
| !!! | TTGGGGGACTAGTAGTTTTT+TGG | + | chr2_1:72537484-72537503 | Msa0223050:three_prime_UTR | 40.0% |
| AGGCCATGAAAGAGTGAGTT+TGG | - | chr2_1:72532874-72532893 | None:intergenic | 45.0% | |
| !!! | TGAGCTGTTTTTGAAGGAGG+AGG | - | chr2_1:72532907-72532926 | None:intergenic | 45.0% |
| CTTTGTAAACATCCCGTCGA+TGG | + | chr2_1:72533021-72533040 | Msa0223050:CDS | 45.0% | |
| TGTATCTGGTGGCCCAATTA+TGG | - | chr2_1:72533097-72533116 | None:intergenic | 45.0% | |
| GCTGAGTAGTTGGTCAAACT+CGG | - | chr2_1:72534039-72534058 | None:intergenic | 45.0% | |
| GCTGAGTAGTTGGTCAAACT+CGG | - | chr2_1:72534039-72534058 | None:intergenic | 45.0% | |
| ! | CTGAGTGGTTAGTCAAACTC+AGG | - | chr2_1:72534414-72534433 | None:intergenic | 45.0% |
| GGACTGTTTGGATAGTTCGA+CGG | - | chr2_1:72534506-72534525 | None:intergenic | 45.0% | |
| !! | TTCACTGATGGTGGACTGTT+TGG | - | chr2_1:72534518-72534537 | None:intergenic | 45.0% |
| GAAGTGAACTTCACTGATGG+TGG | - | chr2_1:72534527-72534546 | None:intergenic | 45.0% | |
| TCAGAGATATGGCATCCCAA+TGG | + | chr2_1:72534545-72534564 | Msa0223050:CDS | 45.0% | |
| AGATATGGCATCCCAATGGT+TGG | + | chr2_1:72534549-72534568 | Msa0223050:intron | 45.0% | |
| ! | GTTCCCGATACGTTTTGCAT+CGG | + | chr2_1:72534687-72534706 | Msa0223050:intron | 45.0% |
| CATCCGATGCAAAACGTATC+GGG | - | chr2_1:72534693-72534712 | None:intergenic | 45.0% | |
| GCATCCGATGCAAAACGTAT+CGG | - | chr2_1:72534694-72534713 | None:intergenic | 45.0% | |
| ! | GTAACTTGTCCGTGCATCAT+TGG | + | chr2_1:72534716-72534735 | Msa0223050:intron | 45.0% |
| TTGCAGTATATCCTGATGGG+CGG | + | chr2_1:72534803-72534822 | Msa0223050:intron | 45.0% | |
| GATACGTTGGAGATGCATCA+CGG | - | chr2_1:72535305-72535324 | None:intergenic | 45.0% | |
| CGCTAGAGTAGAAGCTTTCT+CGG | + | chr2_1:72535445-72535464 | Msa0223050:intron | 45.0% | |
| GCTAGAGTAGAAGCTTTCTC+GGG | + | chr2_1:72535446-72535465 | Msa0223050:intron | 45.0% | |
| AAGTGGCATACCATATCCCA+AGG | - | chr2_1:72535624-72535643 | None:intergenic | 45.0% | |
| ACTGCAGCTTCAACATTTGC+CGG | - | chr2_1:72535802-72535821 | None:intergenic | 45.0% | |
| CGGTTTGCCTTTACTTCTCT+AGG | - | chr2_1:72535904-72535923 | None:intergenic | 45.0% | |
| ! | TTTTCTCTTGGCATGTTGGC+AGG | + | chr2_1:72536367-72536386 | Msa0223050:intron | 45.0% |
| !!! | GTGTTTTTTTGAAGGGTGGG+AGG | - | chr2_1:72536436-72536455 | None:intergenic | 45.0% |
| GGCAAGGGATGTGTAGTATT+AGG | + | chr2_1:72536887-72536906 | Msa0223050:intron | 45.0% | |
| ! | AAAAGGTTAGCCGATGTGTG+CGG | + | chr2_1:72537213-72537232 | Msa0223050:CDS | 45.0% |
| CTACACAGATCAACGGTAAC+AGG | - | chr2_1:72537331-72537350 | None:intergenic | 45.0% | |
| !! | ATTTATGAAAAATTAAAAAA+GGG | - | chr2_1:72533150-72533169 | None:intergenic | 5.0% |
| !! | AATTTATGAAAAATTAAAAA+AGG | - | chr2_1:72533151-72533170 | None:intergenic | 5.0% |
| !!! | TTTTTTTAATTTATACTTAT+TGG | + | chr2_1:72533268-72533287 | Msa0223050:intron | 5.0% |
| !!! | CTTATTAATTTTAAAAAAAT+TGG | - | chr2_1:72535334-72535353 | None:intergenic | 5.0% |
| ! | TTGAAGGAGGAGGCTTGCTT+GGG | - | chr2_1:72532897-72532916 | None:intergenic | 50.0% |
| ! | TTTGAAGGAGGAGGCTTGCT+TGG | - | chr2_1:72532898-72532917 | None:intergenic | 50.0% |
| ! | GGTTTCGTCGACTAAACCAG+CGG | - | chr2_1:72533052-72533071 | None:intergenic | 50.0% |
| GTTCGACGGAAAGCTCATGA+TGG | - | chr2_1:72534492-72534511 | None:intergenic | 50.0% | |
| ! | TGCAGTATATCCTGATGGGC+GGG | + | chr2_1:72534804-72534823 | Msa0223050:intron | 50.0% |
| TAACCATTTGGGTCATCCCC+AGG | - | chr2_1:72534853-72534872 | None:intergenic | 50.0% | |
| GGTCGGATACTGATACTCCT+AGG | - | chr2_1:72535401-72535420 | None:intergenic | 50.0% | |
| !! | CACTCATGGTGGACAAGAAG+TGG | - | chr2_1:72535641-72535660 | None:intergenic | 50.0% |
| TTCCACGTATGCTCTCTTGC+AGG | + | chr2_1:72535720-72535739 | Msa0223050:intron | 50.0% | |
| ! | TACCTGCAAGAGAGCATACG+TGG | - | chr2_1:72535725-72535744 | None:intergenic | 50.0% |
| ATGTTGGCAGGCTTGGCAAT+GGG | + | chr2_1:72536379-72536398 | Msa0223050:intron | 50.0% | |
| TTCATCCCTGAACTTGTGGC+AGG | - | chr2_1:72536471-72536490 | None:intergenic | 50.0% | |
| AATAGACATGCCTGGCCGAA+AGG | - | chr2_1:72536852-72536871 | None:intergenic | 50.0% | |
| GGGATCTCAATAGACATGCC+TGG | - | chr2_1:72536860-72536879 | None:intergenic | 50.0% | |
| TGAGATCCCTACAGTTGGCA+AGG | + | chr2_1:72536871-72536890 | Msa0223050:intron | 50.0% | |
| GAGATCCCTACAGTTGGCAA+GGG | + | chr2_1:72536872-72536891 | Msa0223050:intron | 50.0% | |
| CACATCCCTTGCCAACTGTA+GGG | - | chr2_1:72536880-72536899 | None:intergenic | 50.0% | |
| ACACATCCCTTGCCAACTGT+AGG | - | chr2_1:72536881-72536900 | None:intergenic | 50.0% | |
| AATAGCAAGATACGAGGGGC+CGG | - | chr2_1:72537267-72537286 | None:intergenic | 50.0% | |
| ACCAGCGGAAAAGCCATCGA+CGG | - | chr2_1:72533037-72533056 | None:intergenic | 55.0% | |
| GATATGCAAACCCGCCCATC+AGG | - | chr2_1:72534817-72534836 | None:intergenic | 55.0% | |
| ATGAGCTTGCAAGTGAGCGC+TGG | + | chr2_1:72534872-72534891 | Msa0223050:CDS | 55.0% | |
| TCTTGGCATGTTGGCAGGCT+TGG | + | chr2_1:72536372-72536391 | Msa0223050:intron | 55.0% | |
| CATGTTGGCAGGCTTGGCAA+TGG | + | chr2_1:72536378-72536397 | Msa0223050:intron | 55.0% | |
| TGTTGGCAGGCTTGGCAATG+GGG | + | chr2_1:72536380-72536399 | Msa0223050:intron | 55.0% | |
| CCTGAACTTGTGGCAGGAAG+GGG | - | chr2_1:72536465-72536484 | None:intergenic | 55.0% | |
| CCCTGAACTTGTGGCAGGAA+GGG | - | chr2_1:72536466-72536485 | None:intergenic | 55.0% | |
| CCCTTCCTGCCACAAGTTCA+GGG | + | chr2_1:72536463-72536482 | Msa0223050:intron | 55.0% | |
| TCCCTGAACTTGTGGCAGGA+AGG | - | chr2_1:72536467-72536486 | None:intergenic | 55.0% | |
| TGCAGAAGGAGTGGAGAGAC+AGG | + | chr2_1:72537174-72537193 | Msa0223050:intron | 55.0% | |
| CCTGTGACTTCCGCACACAT+CGG | - | chr2_1:72537226-72537245 | None:intergenic | 55.0% | |
| ! | AAGGAGGAGGCTTGCTTGGG+AGG | - | chr2_1:72532894-72532913 | None:intergenic | 60.0% |
| CCAGCGGAAAAGCCATCGAC+GGG | - | chr2_1:72533036-72533055 | None:intergenic | 60.0% | |
| CCATTTGGGTCATCCCCAGG+AGG | - | chr2_1:72534850-72534869 | None:intergenic | 60.0% | |
| CCTCCTGGGGATGACCCAAA+TGG | + | chr2_1:72534847-72534866 | Msa0223050:CDS | 60.0% | |
| GGCGTGTCGAGAATGAGACG+TGG | + | chr2_1:72536118-72536137 | Msa0223050:intron | 60.0% | |
| GCTTGGCAATGGGGCAGGTA+GGG | + | chr2_1:72536389-72536408 | Msa0223050:intron | 60.0% | |
| CCCCTTCCTGCCACAAGTTC+AGG | + | chr2_1:72536462-72536481 | Msa0223050:intron | 60.0% | |
| !! | GACGTGGGTTAGGGTGAGCA+GGG | - | chr2_1:72536533-72536552 | None:intergenic | 60.0% |
| !! | AGACGTGGGTTAGGGTGAGC+AGG | - | chr2_1:72536534-72536553 | None:intergenic | 60.0% |
| CCGATGTGTGCGGAAGTCAC+AGG | + | chr2_1:72537223-72537242 | Msa0223050:CDS | 60.0% | |
| ! | CCCGTCGATGGCTTTTCCGC+TGG | + | chr2_1:72533033-72533052 | Msa0223050:CDS | 65.0% |
| GGCTTGGCAATGGGGCAGGT+AGG | + | chr2_1:72536388-72536407 | Msa0223050:intron | 65.0% | |
| GGCAATGGGGCAGGTAGGGA+CGG | + | chr2_1:72536393-72536412 | Msa0223050:intron | 65.0% | |
| GCAATGGGGCAGGTAGGGAC+GGG | + | chr2_1:72536394-72536413 | Msa0223050:intron | 65.0% | |
| GGGTTAGGGTGAGCAGGGTG+TGG | - | chr2_1:72536528-72536547 | None:intergenic | 65.0% | |
| GGCAGGCTTGGCAATGGGGC+AGG | + | chr2_1:72536384-72536403 | Msa0223050:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 72532694 | 72537681 | 72532694 | ID=Msa0223050;Name=Msa0223050 |
| chr2_1 | mRNA | 72532694 | 72537681 | 72532694 | ID=Msa0223050-mRNA-1;Parent=Msa0223050;Name=Msa0223050-mRNA-1;_AED=0.00;_eAED=0.00;_QI=193|1|1|1|1|1|6|425|166 |
| chr2_1 | exon | 72532694 | 72532929 | 72532694 | ID=Msa0223050-mRNA-1:exon:20984;Parent=Msa0223050-mRNA-1 |
| chr2_1 | exon | 72533019 | 72533121 | 72533019 | ID=Msa0223050-mRNA-1:exon:20985;Parent=Msa0223050-mRNA-1 |
| chr2_1 | exon | 72534469 | 72534566 | 72534469 | ID=Msa0223050-mRNA-1:exon:20986;Parent=Msa0223050-mRNA-1 |
| chr2_1 | exon | 72534809 | 72534909 | 72534809 | ID=Msa0223050-mRNA-1:exon:20987;Parent=Msa0223050-mRNA-1 |
| chr2_1 | exon | 72535742 | 72535819 | 72535742 | ID=Msa0223050-mRNA-1:exon:20988;Parent=Msa0223050-mRNA-1 |
| chr2_1 | exon | 72537179 | 72537681 | 72537179 | ID=Msa0223050-mRNA-1:exon:20989;Parent=Msa0223050-mRNA-1 |
| chr2_1 | five_prime_UTR | 72532694 | 72532886 | 72532694 | ID=Msa0223050-mRNA-1:five_prime_utr;Parent=Msa0223050-mRNA-1 |
| chr2_1 | CDS | 72532887 | 72532929 | 72532887 | ID=Msa0223050-mRNA-1:cds;Parent=Msa0223050-mRNA-1 |
| chr2_1 | CDS | 72533019 | 72533121 | 72533019 | ID=Msa0223050-mRNA-1:cds;Parent=Msa0223050-mRNA-1 |
| chr2_1 | CDS | 72534469 | 72534566 | 72534469 | ID=Msa0223050-mRNA-1:cds;Parent=Msa0223050-mRNA-1 |
| chr2_1 | CDS | 72534809 | 72534909 | 72534809 | ID=Msa0223050-mRNA-1:cds;Parent=Msa0223050-mRNA-1 |
| chr2_1 | CDS | 72535742 | 72535819 | 72535742 | ID=Msa0223050-mRNA-1:cds;Parent=Msa0223050-mRNA-1 |
| chr2_1 | CDS | 72537179 | 72537256 | 72537179 | ID=Msa0223050-mRNA-1:cds;Parent=Msa0223050-mRNA-1 |
| chr2_1 | three_prime_UTR | 72537257 | 72537681 | 72537257 | ID=Msa0223050-mRNA-1:three_prime_utr;Parent=Msa0223050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
