Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1140590 | XP_003621734.2 | 76.991 | 113 | 7 | 2 | 1 | 94 | 1 | 113 | 1.65e-48 | 168 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1140590 | G7KUQ5 | 76.991 | 113 | 7 | 2 | 1 | 94 | 1 | 113 | 7.88e-49 | 168 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003220 | Msa1140590 | 0.809922 | 1.488863e-50 | -8.615850e-47 |
| Msa0003270 | Msa1140590 | 0.816101 | 6.577223e-52 | -8.615850e-47 |
| Msa0010770 | Msa1140590 | 0.807326 | 5.338876e-50 | -8.615850e-47 |
| Msa0074750 | Msa1140590 | 0.815456 | 9.160381e-52 | -8.615850e-47 |
| Msa0640940 | Msa1140590 | 0.805119 | 1.556631e-49 | -8.615850e-47 |
| Msa0687230 | Msa1140590 | 0.819759 | 9.809738e-53 | -8.615850e-47 |
| Msa0687450 | Msa1140590 | 0.801131 | 1.040408e-48 | -8.615850e-47 |
| Msa0697720 | Msa1140590 | 0.801592 | 8.370880e-49 | -8.615850e-47 |
| Msa0705390 | Msa1140590 | 0.808803 | 2.588579e-50 | -8.615850e-47 |
| Msa0749400 | Msa1140590 | 0.807135 | 5.859658e-50 | -8.615850e-47 |
| Msa0126230 | Msa1140590 | 0.815955 | 7.089754e-52 | -8.615850e-47 |
| Msa0127040 | Msa1140590 | 0.810628 | 1.048911e-50 | -8.615850e-47 |
| Msa0131700 | Msa1140590 | 0.802245 | 6.146682e-49 | -8.615850e-47 |
| Msa0138210 | Msa1140590 | 0.805321 | 1.412274e-49 | -8.615850e-47 |
| Msa0183420 | Msa1140590 | 0.804460 | 2.137965e-49 | -8.615850e-47 |
| Msa0381000 | Msa1140590 | 0.805494 | 1.299238e-49 | -8.615850e-47 |
| Msa0381080 | Msa1140590 | 0.802837 | 4.641377e-49 | -8.615850e-47 |
| Msa0387950 | Msa1140590 | 0.812593 | 3.922001e-51 | -8.615850e-47 |
| Msa0410870 | Msa1140590 | 0.809519 | 1.818226e-50 | -8.615850e-47 |
| Msa0430870 | Msa1140590 | 0.800255 | 1.570667e-48 | -8.615850e-47 |
| Msa0432070 | Msa1140590 | 0.802454 | 5.567228e-49 | -8.615850e-47 |
| Msa0436190 | Msa1140590 | 0.815492 | 8.990249e-52 | -8.615850e-47 |
| Msa0436200 | Msa1140590 | 0.809205 | 2.122781e-50 | -8.615850e-47 |
| Msa1036740 | Msa1140590 | 0.814994 | 1.160148e-51 | -8.615850e-47 |
| Msa1070390 | Msa1140590 | 0.810401 | 1.173961e-50 | -8.615850e-47 |
| Msa1077070 | Msa1140590 | 0.808355 | 3.226269e-50 | -8.615850e-47 |
| Msa1095790 | Msa1140590 | 0.801463 | 8.900366e-49 | -8.615850e-47 |
| Msa0281360 | Msa1140590 | 0.819490 | 1.130172e-52 | -8.615850e-47 |
| Msa0318880 | Msa1140590 | 0.816983 | 4.173642e-52 | -8.615850e-47 |
| Msa0330310 | Msa1140590 | 0.815768 | 7.804932e-52 | -8.615850e-47 |
| Msa1122780 | Msa1140590 | 0.821996 | 2.999448e-53 | -8.615850e-47 |
| Msa1127430 | Msa1140590 | 0.810006 | 1.428656e-50 | -8.615850e-47 |
| Msa1127540 | Msa1140590 | 0.810596 | 1.065499e-50 | -8.615850e-47 |
| Msa1140590 | Msa1201640 | 0.836589 | 8.563087e-57 | -8.615850e-47 |
| Msa1140590 | Msa1205480 | 0.843103 | 1.721135e-58 | -8.615850e-47 |
| Msa1140590 | Msa1205590 | 0.807479 | 4.955372e-50 | -8.615850e-47 |
| Msa1140590 | Msa1211340 | 0.818387 | 2.013399e-52 | -8.615850e-47 |
| Msa1140590 | Msa1254620 | 0.814633 | 1.395170e-51 | -8.615850e-47 |
| Msa1140590 | Msa1259640 | 0.820553 | 6.453047e-53 | -8.615850e-47 |
| Msa1140590 | Msa1296300 | 0.803656 | 3.140948e-49 | -8.615850e-47 |
| Msa1140590 | Msa1329790 | 0.822526 | 2.259841e-53 | -8.615850e-47 |
| Msa1140590 | Msa1393800 | 0.818705 | 1.705444e-52 | -8.615850e-47 |
| Msa1140590 | Msa1407970 | 0.824863 | 6.409039e-54 | -8.615850e-47 |
| Msa1140590 | Msa1426910 | 0.831635 | 1.492841e-55 | -8.615850e-47 |
| Msa1140590 | Msa1438450 | 0.801897 | 7.250510e-49 | -8.615850e-47 |
| Msa1140590 | Msa1450720 | 0.825811 | 3.823431e-54 | -8.615850e-47 |
| Msa1140590 | Msa1454960 | 0.819476 | 1.138199e-52 | -8.615850e-47 |
| Msa1140590 | Msa1464290 | 0.800108 | 1.682107e-48 | -8.615850e-47 |
| Msa1140590 | Msa1466590 | 0.800210 | 1.604056e-48 | -8.615850e-47 |
| Msa0510290 | Msa1140590 | 0.821010 | 5.068778e-53 | -8.615850e-47 |
| Msa0517090 | Msa1140590 | 0.807693 | 4.462479e-50 | -8.615850e-47 |
| Msa0518960 | Msa1140590 | 0.847155 | 1.383207e-59 | -8.615850e-47 |
| Msa0524590 | Msa1140590 | 0.830101 | 3.548731e-55 | -8.615850e-47 |
| Msa0524600 | Msa1140590 | 0.811622 | 6.383854e-51 | -8.615850e-47 |
| Msa0534410 | Msa1140590 | 0.810646 | 1.039292e-50 | -8.615850e-47 |
| Msa0537770 | Msa1140590 | 0.807415 | 5.110707e-50 | -8.615850e-47 |
| Msa0850710 | Msa1140590 | 0.800104 | 1.685788e-48 | -8.615850e-47 |
| Msa0879850 | Msa1140590 | 0.827485 | 1.524503e-54 | -8.615850e-47 |
| Msa0970990 | Msa1140590 | 0.817806 | 2.723401e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1140590 | MtrunA17_Chr7g0222351 | 76.991 | 113 | 7 | 2 | 1 | 94 | 1 | 113 | 1.52e-52 | 168 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1140590 | AT1G24265.2 | 44.248 | 113 | 43 | 4 | 1 | 94 | 1 | 112 | 5.96e-22 | 88.2 |
| Msa1140590 | AT1G24265.1 | 44.248 | 113 | 43 | 4 | 1 | 94 | 1 | 112 | 5.96e-22 | 88.2 |
| Msa1140590 | AT1G24265.3 | 45.122 | 82 | 40 | 3 | 17 | 94 | 67 | 147 | 4.11e-17 | 75.1 |
Find 40 sgRNAs with CRISPR-Local
Find 347 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGCAGCAGTGGTCATTAT+TGG | 0.289388 | 7_4:-12321939 | Msa1140590:CDS |
| ATGCAGCAGTGGTCATTATT+GGG | 0.324473 | 7_4:-12321938 | Msa1140590:CDS |
| GGGTAGGATGTGGATGCCTT+TGG | 0.375016 | 7_4:-12321917 | Msa1140590:CDS |
| CTCACTGTATGAATCAGATT+TGG | 0.375806 | 7_4:+12324019 | None:intergenic |
| ATTGTAAATCCAAGTGGAAC+AGG | 0.409925 | 7_4:-12322184 | Msa1140590:intron |
| CTCTAGTTTCAGAGGTTCAC+TGG | 0.415275 | 7_4:-12326678 | Msa1140590:five_prime_UTR |
| GCGATGAACGATTGTGTTGT+AGG | 0.440222 | 7_4:+12326772 | None:intergenic |
| TAGGATGTGGATGCCTTTGG+TGG | 0.442173 | 7_4:-12321914 | Msa1140590:CDS |
| GTCATTATTGGGGTAGGATG+TGG | 0.469037 | 7_4:-12321927 | Msa1140590:CDS |
| CAATGATGTGTTGCTTGATC+AGG | 0.476098 | 7_4:-12323856 | Msa1140590:intron |
| GATGCCTTTGGTGGAAGGTA+GGG | 0.491411 | 7_4:-12321905 | Msa1140590:CDS |
| AATTTCTGCGCGCGCTAAAA+CGG | 0.494224 | 7_4:+12326732 | None:intergenic |
| GATAACAGGTTAGTAACCTT+CGG | 0.499600 | 7_4:-12322249 | Msa1140590:intron |
| TAACCTTCGGAAGCAAATAG+AGG | 0.516381 | 7_4:-12322236 | Msa1140590:CDS |
| TGTACCTGCGCCGAGGAGAA+TGG | 0.523625 | 7_4:+12326621 | None:intergenic |
| GATCCTCTATTTGCTTCCGA+AGG | 0.525550 | 7_4:+12322233 | None:intergenic |
| CACACCATGGCTCTCTCACT+CGG | 0.526772 | 7_4:-12326652 | Msa1140590:exon |
| TAAGCATAACCTGTTCCACT+TGG | 0.542443 | 7_4:+12322175 | None:intergenic |
| GAGTGTTCCTCTAGTTTCAG+AGG | 0.543610 | 7_4:-12326686 | Msa1140590:five_prime_UTR |
| GGATGCCTTTGGTGGAAGGT+AGG | 0.553202 | 7_4:-12321906 | Msa1140590:CDS |
| TTCATCGCCAAACCCTAAAA+CGG | 0.555321 | 7_4:-12326757 | Msa1140590:five_prime_UTR |
| CTCACCATTCTCCTCGGCGC+AGG | 0.567185 | 7_4:-12326625 | Msa1140590:intron |
| TGTGTTGTAGGTAGTGAGAA+TGG | 0.573640 | 7_4:+12326784 | None:intergenic |
| CACCGAGGGTTTCTTCGTCG+TGG | 0.575166 | 7_4:-12326836 | Msa1140590:five_prime_UTR |
| ATCATTATTGTAAATCCAAG+TGG | 0.576815 | 7_4:-12322190 | Msa1140590:CDS |
| GCAGTGGTCATTATTGGGGT+AGG | 0.588721 | 7_4:-12321933 | Msa1140590:CDS |
| ATGTGGATGCCTTTGGTGGA+AGG | 0.598433 | 7_4:-12321910 | Msa1140590:CDS |
| AATGCCCTACCTTCCACCAA+AGG | 0.612201 | 7_4:+12321901 | None:intergenic |
| TGCAGCAGTGGTCATTATTG+GGG | 0.615945 | 7_4:-12321937 | Msa1140590:CDS |
| AGGAAGAAAATATGCAGCAG+TGG | 0.626274 | 7_4:-12321949 | Msa1140590:CDS |
| GAAGCTTAGCTAGCCACCGA+GGG | 0.632379 | 7_4:-12326850 | Msa1140590:five_prime_UTR |
| GAGAGAGTGTACCTGCGCCG+AGG | 0.645397 | 7_4:+12326614 | None:intergenic |
| CAGTGAACCTCTGAAACTAG+AGG | 0.653867 | 7_4:+12326679 | None:intergenic |
| GGAAAGCTCACCATTCTCCT+CGG | 0.658989 | 7_4:-12326631 | Msa1140590:CDS |
| GGTTCACTGGTCACACACCA+TGG | 0.666192 | 7_4:-12326665 | Msa1140590:exon |
| CGAAGCTTAGCTAGCCACCG+AGG | 0.666541 | 7_4:-12326851 | Msa1140590:five_prime_UTR |
| CTTTCCGAGTGAGAGAGCCA+TGG | 0.684415 | 7_4:+12326648 | None:intergenic |
| AACCACGACGAAGAAACCCT+CGG | 0.685274 | 7_4:+12326834 | None:intergenic |
| TCAAGCAACACATCATTGTG+TGG | 0.687480 | 7_4:+12323861 | None:intergenic |
| CACGACGAAGAAACCCTCGG+TGG | 0.820917 | 7_4:+12326837 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATATATAGGAATATAT+AGG | + | chr7_4:12322039-12322058 | None:intergenic | 10.0% |
| !!! | TTTTTTAAAATAATTACCAA+CGG | + | chr7_4:12322969-12322988 | None:intergenic | 10.0% |
| !!! | TTGGTAATTATTTTAAAAAA+TGG | - | chr7_4:12322969-12322988 | Msa1140590:intron | 10.0% |
| !!! | TAATTATTTTAAAAAATGGA+AGG | - | chr7_4:12322973-12322992 | Msa1140590:intron | 10.0% |
| !!! | AATTATTTTAAAAAATGGAA+GGG | - | chr7_4:12322974-12322993 | Msa1140590:intron | 10.0% |
| !!! | GTTATTAATTATTTGTTTTT+AGG | - | chr7_4:12324702-12324721 | Msa1140590:intron | 10.0% |
| !!! | ATATTTTTCTATTCAATTTT+TGG | + | chr7_4:12325936-12325955 | None:intergenic | 10.0% |
| !! | AAATATTATTGTAAATTTGT+TGG | - | chr7_4:12325950-12325969 | Msa1140590:intron | 10.0% |
| !! | GATTAAAATAATAGAAGTTA+AGG | - | chr7_4:12323420-12323439 | Msa1140590:intron | 15.0% |
| !! | AAAAAAAAAAAAAAAGATGC+TGG | - | chr7_4:12323504-12323523 | Msa1140590:intron | 15.0% |
| !! | AGATGAAATATATGTAATTT+AGG | - | chr7_4:12323860-12323879 | Msa1140590:CDS | 15.0% |
| !! | ATAATATGAATTGAAGATAA+TGG | - | chr7_4:12324064-12324083 | Msa1140590:intron | 15.0% |
| !! | CAATTCATATTATTATACTA+AGG | + | chr7_4:12324057-12324076 | None:intergenic | 15.0% |
| !! | ATAATATGAATTGAAGATAA+TGG | - | chr7_4:12324064-12324083 | Msa1140590:intron | 15.0% |
| !! | CAATTCATATTATTATACTA+AGG | + | chr7_4:12324057-12324076 | None:intergenic | 15.0% |
| !! | ATAATATGAATTGAAGATAA+TGG | - | chr7_4:12324064-12324083 | Msa1140590:intron | 15.0% |
| !! | AACAAAATAAAAGGTAAATT+TGG | - | chr7_4:12325581-12325600 | Msa1140590:intron | 15.0% |
| !!! | ATAAATTTTGTTGAAATTTG+GGG | + | chr7_4:12326180-12326199 | None:intergenic | 15.0% |
| !!! | GATAAATTTTGTTGAAATTT+GGG | + | chr7_4:12326181-12326200 | None:intergenic | 15.0% |
| !!! | AGATAAATTTTGTTGAAATT+TGG | + | chr7_4:12326182-12326201 | None:intergenic | 15.0% |
| !! | AATGAATTGGAGAATAAAAT+TGG | - | chr7_4:12322229-12322248 | Msa1140590:CDS | 20.0% |
| !!! | TAATTCGTTTTTGTGTTTTT+AGG | - | chr7_4:12322346-12322365 | Msa1140590:intron | 20.0% |
| !!! | TCATTTTCTTAAATTATCAC+CGG | + | chr7_4:12322528-12322547 | None:intergenic | 20.0% |
| !! | ATACATTAAATTAGAAGTCT+CGG | - | chr7_4:12322929-12322948 | Msa1140590:intron | 20.0% |
| !! | CATTTCATATATGAAAATAC+AGG | + | chr7_4:12323221-12323240 | None:intergenic | 20.0% |
| !!! | TGTTTTCAACTAGATTTTTT+CGG | + | chr7_4:12323447-12323466 | None:intergenic | 20.0% |
| !! | ATTTCTTCTTACAAAAACAT+GGG | + | chr7_4:12323811-12323830 | None:intergenic | 20.0% |
| !! | TATTTCTTCTTACAAAAACA+TGG | + | chr7_4:12323812-12323831 | None:intergenic | 20.0% |
| !!! | TTGATAATATATGAGATTGA+TGG | - | chr7_4:12323909-12323928 | Msa1140590:CDS | 20.0% |
| !! | AAAATGTCTATCAAAATCAA+AGG | - | chr7_4:12324006-12324025 | Msa1140590:intron | 20.0% |
| !!! | ATTTTTTTTTAACTTGCCTA+AGG | - | chr7_4:12324264-12324283 | Msa1140590:intron | 20.0% |
| !!! | ATTTTTTTTTAACTTGCCTA+AGG | - | chr7_4:12324264-12324283 | Msa1140590:intron | 20.0% |
| !!! | TTATTGTTGATAAGTAATGT+TGG | - | chr7_4:12324773-12324792 | Msa1140590:intron | 20.0% |
| !! | TTTGCATATGTCAAAAAAAT+TGG | - | chr7_4:12325082-12325101 | Msa1140590:intron | 20.0% |
| !! | TTGCATATGTCAAAAAAATT+GGG | - | chr7_4:12325083-12325102 | Msa1140590:intron | 20.0% |
| !! | ATTAAGTTAGAACATAGATT+AGG | + | chr7_4:12325188-12325207 | None:intergenic | 20.0% |
| !!! | TCTATTATACCATTTTAAAG+TGG | - | chr7_4:12325312-12325331 | Msa1140590:intron | 20.0% |
| !!! | CTATTATACCATTTTAAAGT+GGG | - | chr7_4:12325313-12325332 | Msa1140590:intron | 20.0% |
| !! | TTTACAACACTACTTTATAT+GGG | + | chr7_4:12325387-12325406 | None:intergenic | 20.0% |
| !! | ATTTACAACACTACTTTATA+TGG | + | chr7_4:12325388-12325407 | None:intergenic | 20.0% |
| !! | CAAAATTTATCTGTAGATAT+TGG | - | chr7_4:12326190-12326209 | Msa1140590:intron | 20.0% |
| !! | AAAAATATGCAACTAATATC+TGG | + | chr7_4:12326344-12326363 | None:intergenic | 20.0% |
| !! | ACCAAATCTAATTGTAATAT+AGG | - | chr7_4:12326446-12326465 | Msa1140590:intron | 20.0% |
| !! | CCAAATCTAATTGTAATATA+GGG | - | chr7_4:12326447-12326466 | Msa1140590:intron | 20.0% |
| !! | AGGAACACTCTTTTATATAT+AGG | + | chr7_4:12322049-12322068 | None:intergenic | 25.0% |
| !!! | TTATTTGTGATGTTTTGATG+TGG | - | chr7_4:12322301-12322320 | Msa1140590:intron | 25.0% |
| !! | TTTTGATGTGGAAATTGAAA+TGG | - | chr7_4:12322313-12322332 | Msa1140590:intron | 25.0% |
| !!! | TTTGTGTTTTTAGGTCTTTT+TGG | - | chr7_4:12322355-12322374 | Msa1140590:intron | 25.0% |
| !!! | AGGTTGGTTTTTATGATTTT+TGG | - | chr7_4:12322443-12322462 | Msa1140590:intron | 25.0% |
| !!! | GTTTTTATGATTTTTGGTGA+AGG | - | chr7_4:12322449-12322468 | Msa1140590:intron | 25.0% |
| ! | ATGCAACAAATAAAATGTGT+AGG | - | chr7_4:12322557-12322576 | Msa1140590:intron | 25.0% |
| ! | TGTAATTCAAGATTCTCTTA+GGG | - | chr7_4:12323598-12323617 | Msa1140590:intron | 25.0% |
| !! | AATAGGTAAATCTGAAGTTT+GGG | + | chr7_4:12323664-12323683 | None:intergenic | 25.0% |
| ! | TCATTTATATTTGCAATCCA+AGG | - | chr7_4:12323723-12323742 | Msa1140590:intron | 25.0% |
| ! | CATTTATATTTGCAATCCAA+GGG | - | chr7_4:12323724-12323743 | Msa1140590:intron | 25.0% |
| ! | AGAAGAAATATATGTAATGC+AGG | - | chr7_4:12323822-12323841 | Msa1140590:intron | 25.0% |
| !!! | ATATGTAATGCAGGTTTTTT+CGG | - | chr7_4:12323831-12323850 | Msa1140590:intron | 25.0% |
| !!! | TTTAGGTTTTTGTAAGATGT+TGG | - | chr7_4:12323877-12323896 | Msa1140590:CDS | 25.0% |
| !! | AATTGAAGATAATGGTATCA+TGG | - | chr7_4:12324072-12324091 | Msa1140590:intron | 25.0% |
| ! | AATGGTATCATGGAAAAATT+TGG | - | chr7_4:12324082-12324101 | Msa1140590:intron | 25.0% |
| ! | CAAGTTCAAAAAAAATTCTC+CGG | + | chr7_4:12324110-12324129 | None:intergenic | 25.0% |
| !!! | ATTTTTTTTGAACTTGCCTA+AGG | - | chr7_4:12324114-12324133 | Msa1140590:intron | 25.0% |
| ! | TGAATTAAAACATCTACCAT+AGG | + | chr7_4:12324176-12324195 | None:intergenic | 25.0% |
| !! | TATTATTATACTAAGGCATC+TGG | + | chr7_4:12324201-12324220 | None:intergenic | 25.0% |
| !! | AATTGAAGATAATGGTATCA+TGG | - | chr7_4:12324072-12324091 | Msa1140590:intron | 25.0% |
| ! | AATGGTATCATGGAAAAATT+TGG | - | chr7_4:12324082-12324101 | Msa1140590:intron | 25.0% |
| ! | GCAAGTTAAAAAAAAATCTC+CGG | + | chr7_4:12324261-12324280 | None:intergenic | 25.0% |
| ! | TGAATTAAAACATCTACCAT+AGG | + | chr7_4:12324176-12324195 | None:intergenic | 25.0% |
| !! | TATTATTATACTAAGGCATC+TGG | + | chr7_4:12324201-12324220 | None:intergenic | 25.0% |
| !! | AATTGAAGATAATGGTATCA+TGG | - | chr7_4:12324072-12324091 | Msa1140590:intron | 25.0% |
| ! | AATGGTATCATGGAAAAATT+TGG | - | chr7_4:12324082-12324101 | Msa1140590:intron | 25.0% |
| ! | GCAAGTTAAAAAAAAATCTC+CGG | + | chr7_4:12324261-12324280 | None:intergenic | 25.0% |
| ! | CTAAGATTTGACAATATTCT+GGG | - | chr7_4:12324675-12324694 | Msa1140590:intron | 25.0% |
| ! | AAAATTCTCTAACTGATGAA+GGG | + | chr7_4:12324998-12325017 | None:intergenic | 25.0% |
| ! | TAAAATTCTCTAACTGATGA+AGG | + | chr7_4:12324999-12325018 | None:intergenic | 25.0% |
| ! | TGCATATGTCAAAAAAATTG+GGG | - | chr7_4:12325084-12325103 | Msa1140590:intron | 25.0% |
| ! | ACAACGAGAAACAAAATAAA+AGG | - | chr7_4:12325572-12325591 | Msa1140590:intron | 25.0% |
| !!! | GTTGTTTATTTTTGCAGATT+AGG | + | chr7_4:12325766-12325785 | None:intergenic | 25.0% |
| ! | CTGCAAAAATAAACAACTAA+AGG | - | chr7_4:12325769-12325788 | Msa1140590:intron | 25.0% |
| ! | ATGTTATTGCTTCTTAAACT+TGG | - | chr7_4:12326261-12326280 | Msa1140590:intron | 25.0% |
| ! | TAAACTTGGTATGTATCATT+TGG | - | chr7_4:12326275-12326294 | Msa1140590:intron | 25.0% |
| ! | TATGTATCATTTGGAAACAA+GGG | - | chr7_4:12326284-12326303 | Msa1140590:intron | 25.0% |
| ! | TCTGCATAAACTATGAAATA+TGG | + | chr7_4:12326399-12326418 | None:intergenic | 25.0% |
| ! | CCCTATATTACAATTAGATT+TGG | + | chr7_4:12326450-12326469 | None:intergenic | 25.0% |
| ! | GTAATATAGGGTAATTGAAA+TGG | - | chr7_4:12326459-12326478 | Msa1140590:intron | 25.0% |
| ! | ATCATTATTGTAAATCCAAG+TGG | - | chr7_4:12326555-12326574 | Msa1140590:intron | 25.0% |
| !! | GTTAGCTTAGACAAAAATAT+GGG | + | chr7_4:12326722-12326741 | None:intergenic | 25.0% |
| !! | TGTTAGCTTAGACAAAAATA+TGG | + | chr7_4:12326723-12326742 | None:intergenic | 25.0% |
| ! | TTCTCTTCCTTTGATTTCTA+CGG | - | chr7_4:12322170-12322189 | Msa1140590:intron | 30.0% |
| CGAATCACAAATTCAAACTA+CGG | + | chr7_4:12322198-12322217 | None:intergenic | 30.0% | |
| GGAGAATAAAATTGGAATCT+AGG | - | chr7_4:12322237-12322256 | Msa1140590:CDS | 30.0% | |
| CAAATAAAATGTGTAGGTGT+CGG | - | chr7_4:12322563-12322582 | Msa1140590:intron | 30.0% | |
| ! | ACAACTTTAATTAGAAGTGC+CGG | - | chr7_4:12322733-12322752 | Msa1140590:intron | 30.0% |
| AAATACAGGACATATTCCTA+TGG | + | chr7_4:12323207-12323226 | None:intergenic | 30.0% | |
| ATACTACTTTGAACAGCAAA+AGG | + | chr7_4:12323254-12323273 | None:intergenic | 30.0% | |
| AAGTAGTATGATTAAGATGC+TGG | - | chr7_4:12323265-12323284 | Msa1140590:intron | 30.0% | |
| ATACTACTTTGAACAGCAAA+AGG | + | chr7_4:12323254-12323273 | None:intergenic | 30.0% | |
| AAGTAGTATGATTAAGATGC+TGG | - | chr7_4:12323265-12323284 | Msa1140590:intron | 30.0% | |
| AGCTATGTTGAATGTATACA+AGG | - | chr7_4:12323567-12323586 | Msa1140590:intron | 30.0% | |
| GCTATGTTGAATGTATACAA+GGG | - | chr7_4:12323568-12323587 | Msa1140590:intron | 30.0% | |
| GTGTAATTCAAGATTCTCTT+AGG | - | chr7_4:12323597-12323616 | Msa1140590:intron | 30.0% | |
| GTAATTCAAGATTCTCTTAG+GGG | - | chr7_4:12323599-12323618 | Msa1140590:intron | 30.0% | |
| ! | GAATAGGTAAATCTGAAGTT+TGG | + | chr7_4:12323665-12323684 | None:intergenic | 30.0% |
| CTTAGCTCATTTCTATGAAT+AGG | + | chr7_4:12323681-12323700 | None:intergenic | 30.0% | |
| !! | AGCTTTTTAAATGTGCTACT+CGG | - | chr7_4:12323699-12323718 | Msa1140590:intron | 30.0% |
| !! | AATATATGAGATTGATGGTG+CGG | - | chr7_4:12323914-12323933 | Msa1140590:CDS | 30.0% |
| ACTAAGTGTAAAAATCCTCT+AGG | - | chr7_4:12323967-12323986 | Msa1140590:intron | 30.0% | |
| AATGGATCATATGAAACCTA+TGG | - | chr7_4:12324157-12324176 | Msa1140590:intron | 30.0% | |
| !!! | TTTTTTTAACTTGCCTAAGG+TGG | - | chr7_4:12324267-12324286 | Msa1140590:intron | 30.0% |
| !!! | TTTTTTAACTTGCCTAAGGT+GGG | - | chr7_4:12324268-12324287 | Msa1140590:intron | 30.0% |
| AATGGATCATATGAAACCTA+TGG | - | chr7_4:12324157-12324176 | Msa1140590:intron | 30.0% | |
| !!! | TTTTTTTAACTTGCCTAAGG+TGG | - | chr7_4:12324267-12324286 | Msa1140590:intron | 30.0% |
| !!! | TTTTTTAACTTGCCTAAGGT+GGG | - | chr7_4:12324268-12324287 | Msa1140590:intron | 30.0% |
| AATGGATCATATGAAACCTA+AGG | - | chr7_4:12324157-12324176 | Msa1140590:intron | 30.0% | |
| TCTTGCAATTAAAACACCTT+AGG | + | chr7_4:12324476-12324495 | None:intergenic | 30.0% | |
| CCAGAATATTGTCAAATCTT+AGG | + | chr7_4:12324677-12324696 | None:intergenic | 30.0% | |
| CCTAAGATTTGACAATATTC+TGG | - | chr7_4:12324674-12324693 | Msa1140590:intron | 30.0% | |
| ! | TTGTTGATAAGTAATGTTGG+AGG | - | chr7_4:12324776-12324795 | Msa1140590:intron | 30.0% |
| TAAGTTGCCTTAAAAAAACC+TGG | + | chr7_4:12324832-12324851 | None:intergenic | 30.0% | |
| TATGTCAAAAAAATTGGGGA+AGG | - | chr7_4:12325088-12325107 | Msa1140590:intron | 30.0% | |
| ATGTCAAAAAAATTGGGGAA+GGG | - | chr7_4:12325089-12325108 | Msa1140590:intron | 30.0% | |
| CAAGTTTGAAAAGTTGAAAC+AGG | - | chr7_4:12325247-12325266 | Msa1140590:intron | 30.0% | |
| AAGTAGTGTTGTAAATTGCA+CGG | - | chr7_4:12325392-12325411 | Msa1140590:intron | 30.0% | |
| !! | TTTTGCAGATTAGGCTTTAA+AGG | + | chr7_4:12325757-12325776 | None:intergenic | 30.0% |
| !! | AACTAAAGGCACCATAAAAT+AGG | - | chr7_4:12325783-12325802 | Msa1140590:intron | 30.0% |
| ! | TCAAAGTTCCACCTATTTTA+TGG | + | chr7_4:12325797-12325816 | None:intergenic | 30.0% |
| !!! | GTTGTTTTTTTTAAAGCCTG+AGG | + | chr7_4:12325823-12325842 | None:intergenic | 30.0% |
| CTTGAGAAGAGTTTATAAAG+AGG | - | chr7_4:12326109-12326128 | Msa1140590:intron | 30.0% | |
| CTAACTCATCTTTACAAAAC+CGG | + | chr7_4:12326156-12326175 | None:intergenic | 30.0% | |
| ! | GTATAAACGAAAGAAGTGTA+AGG | + | chr7_4:12326234-12326253 | None:intergenic | 30.0% |
| AAGAAGCAATAACATGCTTT+AGG | + | chr7_4:12326256-12326275 | None:intergenic | 30.0% | |
| GTATGTATCATTTGGAAACA+AGG | - | chr7_4:12326283-12326302 | Msa1140590:intron | 30.0% | |
| ! | TTTACTGTTTTCGCAATCAT+TGG | - | chr7_4:12326670-12326689 | Msa1140590:five_prime_UTR | 30.0% |
| TCAAAGGAAGAGAAATTCGA+AGG | + | chr7_4:12322164-12322183 | None:intergenic | 35.0% | |
| TTTGAATTTGTGATTCGTCG+TGG | - | chr7_4:12322201-12322220 | Msa1140590:CDS | 35.0% | |
| GGTTAGTATTGTAATGATCG+TGG | - | chr7_4:12322258-12322277 | Msa1140590:intron | 35.0% | |
| TGTAATGATCGTGGTGAATT+TGG | - | chr7_4:12322267-12322286 | Msa1140590:intron | 35.0% | |
| !!! | GTGTTTTTAGGTCTTTTTGG+TGG | - | chr7_4:12322358-12322377 | Msa1140590:intron | 35.0% |
| !!! | GATTTTTCTGGTGTTGTATC+TGG | - | chr7_4:12322412-12322431 | Msa1140590:intron | 35.0% |
| ACATCGTTTATGTGCTTCAT+AGG | + | chr7_4:12322630-12322649 | None:intergenic | 35.0% | |
| GATGCCACTGGTAATAATTT+GGG | - | chr7_4:12322656-12322675 | Msa1140590:intron | 35.0% | |
| TCTTCCCAAATTATTACCAG+TGG | + | chr7_4:12322663-12322682 | None:intergenic | 35.0% | |
| !! | ATACATATGTAGTGTCGATC+CGG | - | chr7_4:12323010-12323029 | Msa1140590:intron | 35.0% |
| AGATTGATAGATGACAGATG+TGG | - | chr7_4:12323134-12323153 | Msa1140590:intron | 35.0% | |
| ! | TTTTTCCCCACAAATCTCTT+TGG | - | chr7_4:12323163-12323182 | Msa1140590:intron | 35.0% |
| ATGAACCAAAGAGATTTGTG+GGG | + | chr7_4:12323171-12323190 | None:intergenic | 35.0% | |
| GATGAACCAAAGAGATTTGT+GGG | + | chr7_4:12323172-12323191 | None:intergenic | 35.0% | |
| AGATGAACCAAAGAGATTTG+TGG | + | chr7_4:12323173-12323192 | None:intergenic | 35.0% | |
| AAACAGTGTGATTAAGATGC+TGG | - | chr7_4:12323462-12323481 | Msa1140590:intron | 35.0% | |
| AGCTCCTAACTGAATATCTT+CGG | + | chr7_4:12323551-12323570 | None:intergenic | 35.0% | |
| ! | GTAAATCTGAAGTTTGGGTT+TGG | + | chr7_4:12323659-12323678 | None:intergenic | 35.0% |
| TATTTGCAATCCAAGGGATT+TGG | - | chr7_4:12323730-12323749 | Msa1140590:intron | 35.0% | |
| AGTGAGGTGAATGATTCAAT+GGG | - | chr7_4:12323761-12323780 | Msa1140590:intron | 35.0% | |
| !! | ATATATGAGATTGATGGTGC+GGG | - | chr7_4:12323915-12323934 | Msa1140590:CDS | 35.0% |
| ! | ATCATGGAAAAATTTGGAGC+CGG | - | chr7_4:12324088-12324107 | Msa1140590:intron | 35.0% |
| !!! | TTTTTTGAACTTGCCTAAGG+TGG | - | chr7_4:12324117-12324136 | Msa1140590:intron | 35.0% |
| ! | TTTTTGAACTTGCCTAAGGT+GGG | - | chr7_4:12324118-12324137 | Msa1140590:intron | 35.0% |
| GGTTTCATCAGTGAGAAAAA+TGG | - | chr7_4:12324139-12324158 | Msa1140590:intron | 35.0% | |
| ! | ATCATGGAAAAATTTGGAGC+CGG | - | chr7_4:12324088-12324107 | Msa1140590:intron | 35.0% |
| GGTTTCATCAGTGAGAAAAA+TGG | - | chr7_4:12324139-12324158 | Msa1140590:intron | 35.0% | |
| ! | ATCATGGAAAAATTTGGAGC+CGG | - | chr7_4:12324088-12324107 | Msa1140590:intron | 35.0% |
| GGTTTCATCAGTGAGAAAAA+TGG | - | chr7_4:12324139-12324158 | Msa1140590:intron | 35.0% | |
| TTGATTCCAGCTTTCATTGT+TGG | - | chr7_4:12324595-12324614 | Msa1140590:intron | 35.0% | |
| CTCACTGTATGAATCAGATT+TGG | + | chr7_4:12324729-12324748 | None:intergenic | 35.0% | |
| ATACAGTGAGTCTATGAGTA+TGG | - | chr7_4:12324739-12324758 | Msa1140590:intron | 35.0% | |
| TACAGTGAGTCTATGAGTAT+GGG | - | chr7_4:12324740-12324759 | Msa1140590:intron | 35.0% | |
| ! | CTGATTTTGGACTCTTTCTT+TGG | - | chr7_4:12324806-12324825 | Msa1140590:intron | 35.0% |
| !!! | TCTTTGGCCAGGTTTTTTTA+AGG | - | chr7_4:12324822-12324841 | Msa1140590:intron | 35.0% |
| ! | TTGTGTGGCTTTTTAACAGT+TGG | + | chr7_4:12324872-12324891 | None:intergenic | 35.0% |
| TGTCAAAAAAATTGGGGAAG+GGG | - | chr7_4:12325090-12325109 | Msa1140590:intron | 35.0% | |
| ! | TATGAGCACCCACTTTAAAA+TGG | + | chr7_4:12325324-12325343 | None:intergenic | 35.0% |
| TTAAAGTGGGTGCTCATATA+TGG | - | chr7_4:12325326-12325345 | Msa1140590:intron | 35.0% | |
| !!! | TGGGTCTATATGTTTTGACT+GGG | + | chr7_4:12325368-12325387 | None:intergenic | 35.0% |
| !!! | ATGGGTCTATATGTTTTGAC+TGG | + | chr7_4:12325369-12325388 | None:intergenic | 35.0% |
| AATTGCACGGTTTAACAAAG+TGG | - | chr7_4:12325405-12325424 | Msa1140590:intron | 35.0% | |
| ATTGCACGGTTTAACAAAGT+GGG | - | chr7_4:12325406-12325425 | Msa1140590:intron | 35.0% | |
| GTGAAGAATCACCATATGAA+CGG | - | chr7_4:12325659-12325678 | Msa1140590:intron | 35.0% | |
| ! | CTTGAATCTCATGTTTTGCT+AGG | - | chr7_4:12325700-12325719 | Msa1140590:intron | 35.0% |
| ! | TTTTGCTAGGTTAAAGCTGA+AGG | - | chr7_4:12325713-12325732 | Msa1140590:intron | 35.0% |
| TTTGCTAGGTTAAAGCTGAA+GGG | - | chr7_4:12325714-12325733 | Msa1140590:intron | 35.0% | |
| !! | TAAAGGCACCATAAAATAGG+TGG | - | chr7_4:12325786-12325805 | Msa1140590:intron | 35.0% |
| CTAACCAAAGGTTGCAATTT+AGG | + | chr7_4:12326010-12326029 | None:intergenic | 35.0% | |
| GAGAAGAGTTTATAAAGAGG+AGG | - | chr7_4:12326112-12326131 | Msa1140590:intron | 35.0% | |
| !! | CGGTTTTGTAAAGATGAGTT+AGG | - | chr7_4:12326154-12326173 | Msa1140590:intron | 35.0% |
| CTGCTTATACTTGTGATAAC+AGG | - | chr7_4:12326482-12326501 | Msa1140590:intron | 35.0% | |
| GATAACAGGTTAGTAACCTT+CGG | - | chr7_4:12326496-12326515 | Msa1140590:intron | 35.0% | |
| ATTGTAAATCCAAGTGGAAC+AGG | - | chr7_4:12326561-12326580 | Msa1140590:intron | 35.0% | |
| TACTGCCTTTCTCACATTAT+AGG | - | chr7_4:12326595-12326614 | Msa1140590:intron | 35.0% | |
| ACTGCCTTTCTCACATTATA+GGG | - | chr7_4:12326596-12326615 | Msa1140590:intron | 35.0% | |
| ATAGCCCTATAATGTGAGAA+AGG | + | chr7_4:12326603-12326622 | None:intergenic | 35.0% | |
| AGAAAATGACACAGATACGA+AGG | + | chr7_4:12326753-12326772 | None:intergenic | 35.0% | |
| ATGCTTTGACAATGTACAGA+AGG | - | chr7_4:12326776-12326795 | Msa1140590:five_prime_UTR | 35.0% | |
| TGTGTTGTAGGTAGTGAGAA+TGG | + | chr7_4:12321964-12321983 | None:intergenic | 40.0% | |
| TTCATCGCCAAACCCTAAAA+CGG | - | chr7_4:12321988-12322007 | Msa1140590:intron | 40.0% | |
| TACGGAACCGTAGAAATCAA+AGG | + | chr7_4:12322180-12322199 | None:intergenic | 40.0% | |
| !! | TTCTAAAGAAGGTGGATTGG+CGG | - | chr7_4:12322390-12322409 | Msa1140590:intron | 40.0% |
| TGTTGTATCTGGTGCTTTCA+AGG | - | chr7_4:12322423-12322442 | Msa1140590:intron | 40.0% | |
| CGATGCCACTGGTAATAATT+TGG | - | chr7_4:12322655-12322674 | Msa1140590:intron | 40.0% | |
| ATCGTCTACCTCTATATCAC+CGG | + | chr7_4:12322755-12322774 | None:intergenic | 40.0% | |
| GTGTTAGTGCTACATAGTGA+AGG | - | chr7_4:12323075-12323094 | Msa1140590:intron | 40.0% | |
| CTACATAGTGAAGGATGTGT+GGG | - | chr7_4:12323084-12323103 | Msa1140590:intron | 40.0% | |
| CATCTATGTGATAGAGCCAT+AGG | - | chr7_4:12323188-12323207 | Msa1140590:intron | 40.0% | |
| AAGCCCGAAGATATTCAGTT+AGG | - | chr7_4:12323544-12323563 | Msa1140590:intron | 40.0% | |
| GCTCCTAACTGAATATCTTC+GGG | + | chr7_4:12323550-12323569 | None:intergenic | 40.0% | |
| ATTCAAGATTCTCTTAGGGG+AGG | - | chr7_4:12323602-12323621 | Msa1140590:intron | 40.0% | |
| GAGTGAGGTGAATGATTCAA+TGG | - | chr7_4:12323760-12323779 | Msa1140590:intron | 40.0% | |
| ACATGGGATGTTCCATTCAA+GGG | + | chr7_4:12323795-12323814 | None:intergenic | 40.0% | |
| AACATGGGATGTTCCATTCA+AGG | + | chr7_4:12323796-12323815 | None:intergenic | 40.0% | |
| CAGTCACAAATTACACCTAG+AGG | + | chr7_4:12323985-12324004 | None:intergenic | 40.0% | |
| AAGGAAAGTTTAGTGTGCTG+AGG | - | chr7_4:12324025-12324044 | Msa1140590:intron | 40.0% | |
| AAGCTGGAATCAAATGCCTT+AGG | + | chr7_4:12324588-12324607 | None:intergenic | 40.0% | |
| CAACAACCAACAATGAAAGC+TGG | + | chr7_4:12324604-12324623 | None:intergenic | 40.0% | |
| ACAGTGAGTCTATGAGTATG+GGG | - | chr7_4:12324741-12324760 | Msa1140590:intron | 40.0% | |
| !!! | TGGAGGCTCTATACTGATTT+TGG | - | chr7_4:12324793-12324812 | Msa1140590:intron | 40.0% |
| TCAAGCAACACATCATTGTG+TGG | + | chr7_4:12324887-12324906 | None:intergenic | 40.0% | |
| !! | CAATGATGTGTTGCTTGATC+AGG | - | chr7_4:12324889-12324908 | Msa1140590:intron | 40.0% |
| TTAATGCGCTGTACTTGTGT+CGG | - | chr7_4:12325203-12325222 | Msa1140590:intron | 40.0% | |
| CAGTGAAGAATCACAGTAGA+AGG | - | chr7_4:12325613-12325632 | Msa1140590:intron | 40.0% | |
| AGAATCACAGTAGAAGGAGA+AGG | - | chr7_4:12325619-12325638 | Msa1140590:intron | 40.0% | |
| GAATCACAGTAGAAGGAGAA+GGG | - | chr7_4:12325620-12325639 | Msa1140590:intron | 40.0% | |
| AATCACAGTAGAAGGAGAAG+GGG | - | chr7_4:12325621-12325640 | Msa1140590:intron | 40.0% | |
| CTTTGTCTTCTCCGTTCATA+TGG | + | chr7_4:12325673-12325692 | None:intergenic | 40.0% | |
| TATGAACGGAGAAGACAAAG+CGG | - | chr7_4:12325673-12325692 | Msa1140590:intron | 40.0% | |
| TGGAAATTCCGCCTTAATTG+CGG | - | chr7_4:12325970-12325989 | Msa1140590:intron | 40.0% | |
| TTGCAATGAAGGCTAACCAA+AGG | + | chr7_4:12326022-12326041 | None:intergenic | 40.0% | |
| !! | CTTCATTGTGTTGGCTTTGA+GGG | - | chr7_4:12326052-12326071 | Msa1140590:intron | 40.0% |
| !! | TTCATTGTGTTGGCTTTGAG+GGG | - | chr7_4:12326053-12326072 | Msa1140590:intron | 40.0% |
| TAGTCCCACATCAGATAGAT+AGG | - | chr7_4:12326083-12326102 | Msa1140590:intron | 40.0% | |
| GAGTCCTATCTATCTGATGT+GGG | + | chr7_4:12326090-12326109 | None:intergenic | 40.0% | |
| AGAGTCCTATCTATCTGATG+TGG | + | chr7_4:12326091-12326110 | None:intergenic | 40.0% | |
| !! | CTTTACAAAACCGGCTTGAA+AGG | + | chr7_4:12326147-12326166 | None:intergenic | 40.0% |
| TAACCTTCGGAAGCAAATAG+AGG | - | chr7_4:12326509-12326528 | Msa1140590:intron | 40.0% | |
| TAAGCATAACCTGTTCCACT+TGG | + | chr7_4:12326573-12326592 | None:intergenic | 40.0% | |
| AGGAAGAAAATATGCAGCAG+TGG | - | chr7_4:12326796-12326815 | Msa1140590:five_prime_UTR | 40.0% | |
| TATGCAGCAGTGGTCATTAT+TGG | - | chr7_4:12326806-12326825 | Msa1140590:five_prime_UTR | 40.0% | |
| ATGCAGCAGTGGTCATTATT+GGG | - | chr7_4:12326807-12326826 | Msa1140590:five_prime_UTR | 40.0% | |
| GCGATGAACGATTGTGTTGT+AGG | + | chr7_4:12321976-12321995 | None:intergenic | 45.0% | |
| ! | GCTAAAACGGCACCGTTTTA+GGG | + | chr7_4:12322003-12322022 | None:intergenic | 45.0% |
| AATTTCTGCGCGCGCTAAAA+CGG | + | chr7_4:12322016-12322035 | None:intergenic | 45.0% | |
| ! | GAGTGTTCCTCTAGTTTCAG+AGG | - | chr7_4:12322059-12322078 | Msa1140590:intron | 45.0% |
| !! | CAGTGAACCTCTGAAACTAG+AGG | + | chr7_4:12322069-12322088 | None:intergenic | 45.0% |
| ! | CTCTAGTTTCAGAGGTTCAC+TGG | - | chr7_4:12322067-12322086 | Msa1140590:intron | 45.0% |
| CGTCGTGGTTGTGAATGAAT+TGG | - | chr7_4:12322216-12322235 | Msa1140590:CDS | 45.0% | |
| ! | TGATCGTGGTGAATTTGGTG+TGG | - | chr7_4:12322272-12322291 | Msa1140590:intron | 45.0% |
| !! | AGGTCTTTTTGGTGGAGCAA+TGG | - | chr7_4:12322366-12322385 | Msa1140590:intron | 45.0% |
| ! | GGAGCAATGGCTTCTAAAGA+AGG | - | chr7_4:12322379-12322398 | Msa1140590:intron | 45.0% |
| ! | GCAATGGCTTCTAAAGAAGG+TGG | - | chr7_4:12322382-12322401 | Msa1140590:intron | 45.0% |
| ! | GGCTTCTAAAGAAGGTGGAT+TGG | - | chr7_4:12322387-12322406 | Msa1140590:intron | 45.0% |
| GTATCTGGTGCTTTCAAGGT+TGG | - | chr7_4:12322427-12322446 | Msa1140590:intron | 45.0% | |
| CACTGATACCGACACTTACA+CGG | - | chr7_4:12322497-12322516 | Msa1140590:intron | 45.0% | |
| AGGTGACTATGTCAATGTCG+AGG | + | chr7_4:12322610-12322629 | None:intergenic | 45.0% | |
| ! | AACATGTGTGAGTGTCGTGT+CGG | - | chr7_4:12322702-12322721 | Msa1140590:intron | 45.0% |
| !! | TAGAAGTGCCGGTGATATAG+AGG | - | chr7_4:12322744-12322763 | Msa1140590:intron | 45.0% |
| GGTGATATAGAGGTAGACGA+TGG | - | chr7_4:12322754-12322773 | Msa1140590:intron | 45.0% | |
| TAGAAGTCTCGGTACTAACG+AGG | - | chr7_4:12322940-12322959 | Msa1140590:intron | 45.0% | |
| AGCATGTTTGATGTCTGTGC+CGG | + | chr7_4:12323044-12323063 | None:intergenic | 45.0% | |
| GCTACATAGTGAAGGATGTG+TGG | - | chr7_4:12323083-12323102 | Msa1140590:intron | 45.0% | |
| ! | ATCCAAGGGATTTGGTCAGT+AGG | - | chr7_4:12323738-12323757 | Msa1140590:intron | 45.0% |
| GAAAGTTTAGTGTGCTGAGG+TGG | - | chr7_4:12324028-12324047 | Msa1140590:intron | 45.0% | |
| TCACTGATGAAACCCACCTT+AGG | + | chr7_4:12324133-12324152 | None:intergenic | 45.0% | |
| TCACTGATGAAACCCACCTT+AGG | + | chr7_4:12324133-12324152 | None:intergenic | 45.0% | |
| TCACTGATGAAACCCACCTT+AGG | + | chr7_4:12324133-12324152 | None:intergenic | 45.0% | |
| ! | GTTTTGCTAGAACCCAACGT+CGG | - | chr7_4:12324552-12324571 | Msa1140590:intron | 45.0% |
| GGTAATAATCAGCCGACGTT+GGG | + | chr7_4:12324567-12324586 | None:intergenic | 45.0% | |
| AGGTAATAATCAGCCGACGT+TGG | + | chr7_4:12324568-12324587 | None:intergenic | 45.0% | |
| ! | CGTCGGCTGATTATTACCTA+AGG | - | chr7_4:12324569-12324588 | Msa1140590:intron | 45.0% |
| CAGTGAGTCTATGAGTATGG+GGG | - | chr7_4:12324742-12324761 | Msa1140590:intron | 45.0% | |
| AGTGAGTCTATGAGTATGGG+GGG | - | chr7_4:12324743-12324762 | Msa1140590:intron | 45.0% | |
| TTTGGACTCTTTCTTTGGCC+AGG | - | chr7_4:12324811-12324830 | Msa1140590:intron | 45.0% | |
| TTCTCTAACTGATGAAGGGC+AGG | + | chr7_4:12324994-12325013 | None:intergenic | 45.0% | |
| TAGCATACAGCGGTTGCTAT+TGG | + | chr7_4:12325468-12325487 | None:intergenic | 45.0% | |
| !! | GGCATTGATGTAGCATACAG+CGG | + | chr7_4:12325478-12325497 | None:intergenic | 45.0% |
| ATCACAGTAGAAGGAGAAGG+GGG | - | chr7_4:12325622-12325641 | Msa1140590:intron | 45.0% | |
| GTTGCAATTTAGGCGACTAG+GGG | + | chr7_4:12326000-12326019 | None:intergenic | 45.0% | |
| GGTTGCAATTTAGGCGACTA+GGG | + | chr7_4:12326001-12326020 | None:intergenic | 45.0% | |
| AGGTTGCAATTTAGGCGACT+AGG | + | chr7_4:12326002-12326021 | None:intergenic | 45.0% | |
| GTCGCCTAAATTGCAACCTT+TGG | - | chr7_4:12326003-12326022 | Msa1140590:intron | 45.0% | |
| !! | CAACACAATGAAGGTGTTGG+AGG | + | chr7_4:12326045-12326064 | None:intergenic | 45.0% |
| CTCCAACACCTTCATTGTGT+TGG | - | chr7_4:12326043-12326062 | Msa1140590:intron | 45.0% | |
| ! | AGCCAACACAATGAAGGTGT+TGG | + | chr7_4:12326048-12326067 | None:intergenic | 45.0% |
| CCTCAAAGCCAACACAATGA+AGG | + | chr7_4:12326054-12326073 | None:intergenic | 45.0% | |
| !! | CCTTCATTGTGTTGGCTTTG+AGG | - | chr7_4:12326051-12326070 | Msa1140590:intron | 45.0% |
| !! | TCATTGTGTTGGCTTTGAGG+GGG | - | chr7_4:12326054-12326073 | Msa1140590:intron | 45.0% |
| TTTGGAAACAAGGGCAGATG+AGG | - | chr7_4:12326293-12326312 | Msa1140590:intron | 45.0% | |
| GATCCTCTATTTGCTTCCGA+AGG | + | chr7_4:12326515-12326534 | None:intergenic | 45.0% | |
| GGGCACAATCATGCAAACAA+TGG | + | chr7_4:12326702-12326721 | None:intergenic | 45.0% | |
| TGCAGCAGTGGTCATTATTG+GGG | - | chr7_4:12326808-12326827 | Msa1140590:five_prime_UTR | 45.0% | |
| GTCATTATTGGGGTAGGATG+TGG | - | chr7_4:12326818-12326837 | Msa1140590:five_prime_UTR | 45.0% | |
| AACCACGACGAAGAAACCCT+CGG | + | chr7_4:12321914-12321933 | None:intergenic | 50.0% | |
| !!! | AACGGCACCGTTTTAGGGTT+TGG | + | chr7_4:12321998-12322017 | None:intergenic | 50.0% |
| ! | CGCTAAAACGGCACCGTTTT+AGG | + | chr7_4:12322004-12322023 | None:intergenic | 50.0% |
| GGAAAGCTCACCATTCTCCT+CGG | - | chr7_4:12322114-12322133 | Msa1140590:intron | 50.0% | |
| !!! | GGTGGATTGGCGGATTTTTC+TGG | - | chr7_4:12322400-12322419 | Msa1140590:intron | 50.0% |
| CGTAGATGCAAACACCACAC+TGG | - | chr7_4:12322827-12322846 | Msa1140590:intron | 50.0% | |
| TGTCAGTGTCGTGTTGTGTC+TGG | - | chr7_4:12322905-12322924 | Msa1140590:intron | 50.0% | |
| ! | TGTCGATCCGGTGTTAGAAC+CGG | - | chr7_4:12323022-12323041 | Msa1140590:intron | 50.0% |
| CTCCTACTGACCAAATCCCT+TGG | + | chr7_4:12323743-12323762 | None:intergenic | 50.0% | |
| ! | GGATTTGGTCAGTAGGAGTG+AGG | - | chr7_4:12323745-12323764 | Msa1140590:intron | 50.0% |
| TGGGATGTCCAACCCTTGAA+TGG | - | chr7_4:12323780-12323799 | Msa1140590:intron | 50.0% | |
| GGGATGTTCCATTCAAGGGT+TGG | + | chr7_4:12323791-12323810 | None:intergenic | 50.0% | |
| TTGGCAGTGGTTAACTGCCT+AGG | + | chr7_4:12325449-12325468 | None:intergenic | 50.0% | |
| ACAGTGATGCGCGACACATT+TGG | + | chr7_4:12325499-12325518 | None:intergenic | 50.0% | |
| CGCATTCGCGTAGAACAACA+CGG | - | chr7_4:12325534-12325553 | Msa1140590:intron | 50.0% | |
| TGAAGGGAGAAGACAAACGC+TGG | - | chr7_4:12325730-12325749 | Msa1140590:intron | 50.0% | |
| GGTGGAACTTTGAGTACCTC+AGG | - | chr7_4:12325804-12325823 | Msa1140590:intron | 50.0% | |
| ! | GGTGTTGGAGGTTGCAATGA+AGG | + | chr7_4:12326033-12326052 | None:intergenic | 50.0% |
| !! | CAAAACCGGCTTGAAAGGTG+AGG | + | chr7_4:12326142-12326161 | None:intergenic | 50.0% |
| GCAGTGGTCATTATTGGGGT+AGG | - | chr7_4:12326812-12326831 | Msa1140590:five_prime_UTR | 50.0% | |
| TAGGATGTGGATGCCTTTGG+TGG | - | chr7_4:12326831-12326850 | Msa1140590:five_prime_UTR | 50.0% | |
| ATGTGGATGCCTTTGGTGGA+AGG | - | chr7_4:12326835-12326854 | Msa1140590:five_prime_UTR | 50.0% | |
| GATGCCTTTGGTGGAAGGTA+GGG | - | chr7_4:12326840-12326859 | Msa1140590:five_prime_UTR | 50.0% | |
| AATGCCCTACCTTCCACCAA+AGG | + | chr7_4:12326847-12326866 | None:intergenic | 50.0% | |
| GAAGCTTAGCTAGCCACCGA+GGG | - | chr7_4:12321895-12321914 | Msa1140590:CDS | 55.0% | |
| GGTTCACTGGTCACACACCA+TGG | - | chr7_4:12322080-12322099 | Msa1140590:intron | 55.0% | |
| CACACCATGGCTCTCTCACT+CGG | - | chr7_4:12322093-12322112 | Msa1140590:intron | 55.0% | |
| CTTTCCGAGTGAGAGAGCCA+TGG | + | chr7_4:12322100-12322119 | None:intergenic | 55.0% | |
| !! | CGGTGTCACCGTGTAAGTGT+CGG | + | chr7_4:12322508-12322527 | None:intergenic | 55.0% |
| CGACACTTACACGGTGACAC+CGG | - | chr7_4:12322506-12322525 | Msa1140590:intron | 55.0% | |
| CGATGTTGACACGATGCCAC+TGG | - | chr7_4:12322644-12322663 | Msa1140590:intron | 55.0% | |
| GGTACTAACGAGGTAGCCGT+TGG | - | chr7_4:12322950-12322969 | Msa1140590:intron | 55.0% | |
| !! | GTCTGTGCCGGTTCTAACAC+CGG | + | chr7_4:12323032-12323051 | None:intergenic | 55.0% |
| !! | ATGAGATTGATGGTGCGGGC+AGG | - | chr7_4:12323919-12323938 | Msa1140590:intron | 55.0% |
| TAACTGCCTAGGCCTGTTGG+TGG | + | chr7_4:12325438-12325457 | None:intergenic | 55.0% | |
| GGTTAACTGCCTAGGCCTGT+TGG | + | chr7_4:12325441-12325460 | None:intergenic | 55.0% | |
| ! | ACAGCGGTTGCTATTGGCAG+TGG | + | chr7_4:12325462-12325481 | None:intergenic | 55.0% |
| GTTCTACGCGAATGCGTCTG+AGG | + | chr7_4:12325530-12325549 | None:intergenic | 55.0% | |
| ACAGTAGAAGGAGAAGGGGG+AGG | - | chr7_4:12325625-12325644 | Msa1140590:intron | 55.0% | |
| GCAATTTAGGCGACTAGGGG+CGG | + | chr7_4:12325997-12326016 | None:intergenic | 55.0% | |
| !! | TTGTGTTGGCTTTGAGGGGG+TGG | - | chr7_4:12326057-12326076 | Msa1140590:intron | 55.0% |
| GCACACCTCACCTTTCAAGC+CGG | - | chr7_4:12326134-12326153 | Msa1140590:intron | 55.0% | |
| GGGTAGGATGTGGATGCCTT+TGG | - | chr7_4:12326828-12326847 | Msa1140590:five_prime_UTR | 55.0% | |
| GGATGCCTTTGGTGGAAGGT+AGG | - | chr7_4:12326839-12326858 | Msa1140590:five_prime_UTR | 55.0% | |
| CGAAGCTTAGCTAGCCACCG+AGG | - | chr7_4:12321894-12321913 | Msa1140590:CDS | 60.0% | |
| CACGACGAAGAAACCCTCGG+TGG | + | chr7_4:12321911-12321930 | None:intergenic | 60.0% | |
| CACCGAGGGTTTCTTCGTCG+TGG | - | chr7_4:12321909-12321928 | Msa1140590:CDS | 60.0% | |
| TGTACCTGCGCCGAGGAGAA+TGG | + | chr7_4:12322127-12322146 | None:intergenic | 60.0% | |
| !! | CCAGTATCGACGTGCCAGTG+TGG | + | chr7_4:12322844-12322863 | None:intergenic | 60.0% |
| CCACACTGGCACGTCGATAC+TGG | - | chr7_4:12322841-12322860 | Msa1140590:intron | 60.0% | |
| !! | CCTAGGCCTGTTGGTGGCTA+GGG | + | chr7_4:12325432-12325451 | None:intergenic | 60.0% |
| CTACGCGAATGCGTCTGAGG+CGG | + | chr7_4:12325527-12325546 | None:intergenic | 60.0% | |
| CTAGGGGCGGACCGCAATTA+AGG | + | chr7_4:12325984-12326003 | None:intergenic | 60.0% | |
| CTCACCATTCTCCTCGGCGC+AGG | - | chr7_4:12322120-12322139 | Msa1140590:intron | 65.0% | |
| ! | GAGAGAGTGTACCTGCGCCG+AGG | + | chr7_4:12322134-12322153 | None:intergenic | 65.0% |
| AGTGGGCCCTAGCCACCAAC+AGG | - | chr7_4:12325423-12325442 | Msa1140590:intron | 65.0% | |
| CCCTAGCCACCAACAGGCCT+AGG | - | chr7_4:12325429-12325448 | Msa1140590:intron | 65.0% | |
| !! | GCCTAGGCCTGTTGGTGGCT+AGG | + | chr7_4:12325433-12325452 | None:intergenic | 65.0% |
| GGGGCGGACCGCAATTAAGG+CGG | + | chr7_4:12325981-12326000 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 12321881 | 12326886 | 12321881 | ID=Msa1140590;Name=Msa1140590 |
| chr7_4 | mRNA | 12321881 | 12326886 | 12321881 | ID=Msa1140590-mRNA-1;Parent=Msa1140590;Name=Msa1140590-mRNA-1;_AED=0.11;_eAED=0.11;_QI=218|0.5|0.6|0.8|0.75|1|5|0|103 |
| chr7_4 | exon | 12321881 | 12321972 | 12321881 | ID=Msa1140590-mRNA-1:exon:3026;Parent=Msa1140590-mRNA-1 |
| chr7_4 | exon | 12322185 | 12322263 | 12322185 | ID=Msa1140590-mRNA-1:exon:3025;Parent=Msa1140590-mRNA-1 |
| chr7_4 | exon | 12323857 | 12323934 | 12323857 | ID=Msa1140590-mRNA-1:exon:3024;Parent=Msa1140590-mRNA-1 |
| chr7_4 | exon | 12324024 | 12324043 | 12324024 | ID=Msa1140590-mRNA-1:exon:3023;Parent=Msa1140590-mRNA-1 |
| chr7_4 | exon | 12326626 | 12326886 | 12326626 | ID=Msa1140590-mRNA-1:exon:3022;Parent=Msa1140590-mRNA-1 |
| chr7_4 | five_prime_UTR | 12326669 | 12326886 | 12326669 | ID=Msa1140590-mRNA-1:five_prime_utr;Parent=Msa1140590-mRNA-1 |
| chr7_4 | CDS | 12326626 | 12326668 | 12326626 | ID=Msa1140590-mRNA-1:cds;Parent=Msa1140590-mRNA-1 |
| chr7_4 | CDS | 12324024 | 12324043 | 12324024 | ID=Msa1140590-mRNA-1:cds;Parent=Msa1140590-mRNA-1 |
| chr7_4 | CDS | 12323857 | 12323934 | 12323857 | ID=Msa1140590-mRNA-1:cds;Parent=Msa1140590-mRNA-1 |
| chr7_4 | CDS | 12322185 | 12322263 | 12322185 | ID=Msa1140590-mRNA-1:cds;Parent=Msa1140590-mRNA-1 |
| chr7_4 | CDS | 12321881 | 12321972 | 12321881 | ID=Msa1140590-mRNA-1:cds;Parent=Msa1140590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
