AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1252850

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1252850 MtrunA17_Chr8g0369311 99.324 148 1 0 1 148 57 204 7.68e-109 308
Msa1252850 MtrunA17_Chr3g0108261 93.243 148 10 0 1 148 1 148 1.25e-103 292
Msa1252850 MtrunA17_Chr5g0432831 93.243 148 10 0 1 148 1 148 1.25e-103 292
Msa1252850 MtrunA17_Chr7g0275361 92.568 148 11 0 1 148 1 148 1.63e-102 290
Msa1252850 MtrunA17_Chr1g0154011 91.216 148 13 0 1 148 1 148 7.56e-102 288
Msa1252850 MtrunA17_Chr4g0037011 87.838 148 18 0 1 148 1 148 1.08e-98 280
Msa1252850 MtrunA17_Chr8g0378601 51.034 145 71 0 2 146 23 167 2.05e-55 171
Msa1252850 MtrunA17_Chr2g0316201 50.345 145 72 0 4 148 8 152 1.24e-48 153
Msa1252850 MtrunA17_Chr2g0316211 50.000 144 72 0 5 148 9 152 1.50e-47 150
Msa1252850 MtrunA17_Chr8g0362321 46.575 146 73 1 2 142 5 150 4.70e-45 144
Msa1252850 MtrunA17_Chr4g0060351 46.575 146 73 1 2 142 5 150 6.31e-45 144
Msa1252850 MtrunA17_Chr3g0131871 48.611 144 72 2 5 146 6 149 1.36e-42 139
Msa1252850 MtrunA17_Chr3g0139901 42.857 147 80 3 5 147 7 153 1.43e-35 120
Msa1252850 MtrunA17_Chr4g0038891 43.750 128 72 0 4 131 35 162 9.64e-35 119
Msa1252850 MtrunA17_Chr5g0396451 42.424 132 75 1 4 135 35 165 2.69e-33 115
Msa1252850 MtrunA17_Chr1g0199951 42.537 134 75 2 3 135 43 175 1.54e-31 111
Msa1252850 MtrunA17_Chr4g0053191 36.842 152 89 3 1 145 4 155 2.81e-29 104
Msa1252850 MtrunA17_Chr8g0348701 34.459 148 94 3 1 146 1 147 1.30e-26 98.6
Msa1252850 MtrunA17_Chr5g0401831 32.895 152 95 2 1 145 4 155 2.25e-26 97.4
Msa1252850 MtrunA17_Chr5g0403591 35.766 137 83 3 5 139 33 166 3.23e-26 97.4
Msa1252850 MtrunA17_Chr4g0031181 33.333 135 76 2 15 135 18 152 1.02e-25 95.9
Msa1252850 MtrunA17_Chr7g0254701 34.266 143 94 0 4 146 13 155 4.10e-25 96.7
Msa1252850 MtrunA17_Chr8g0387131 35.772 123 77 2 26 146 25 147 5.52e-25 94.4
Msa1252850 MtrunA17_Chr4g0059291 29.730 148 101 3 1 146 1 147 5.73e-23 89.4
Msa1252850 MtrunA17_Chr2g0328001 31.944 144 84 2 15 144 18 161 6.53e-23 88.6
Msa1252850 MtrunA17_Chr8g0372391 40.777 103 59 2 1 102 15 116 9.82e-21 82.8
Msa1252850 MtrunA17_Chr5g0404931 36.893 103 63 2 1 102 15 116 3.18e-18 76.3
Msa1252850 MtrunA17_Chr4g0068301 33.333 117 72 3 2 114 11 125 1.73e-17 77.0
Msa1252850 MtrunA17_Chr8g0345331 34.188 117 68 3 4 115 8 120 2.44e-17 75.9
Msa1252850 MtrunA17_Chr8g0376111 34.426 122 70 3 4 115 43 164 4.86e-16 73.2
Msa1252850 MtrunA17_Chr7g0233631 35.246 122 69 3 4 115 38 159 2.72e-15 71.2
Msa1252850 MtrunA17_Chr7g0233611 35.246 122 69 3 4 115 38 159 3.67e-15 70.9
Msa1252850 MtrunA17_Chr7g0222941 30.081 123 76 3 3 115 90 212 1.52e-14 68.2
Msa1252850 MtrunA17_Chr2g0282211 28.477 151 95 4 3 143 681 828 1.08e-13 67.4
Msa1252850 MtrunA17_Chr4g0047301 29.333 150 93 4 4 143 672 818 1.71e-13 66.6
Msa1252850 MtrunA17_Chr1g0186291 29.592 98 55 2 43 139 30 114 9.46e-13 61.6
Msa1252850 MtrunA17_Chr4g0045101 31.148 122 74 3 4 115 37 158 1.23e-12 63.5
Msa1252850 MtrunA17_Chr2g0317631 29.268 123 77 3 3 115 306 428 2.75e-12 63.2
Msa1252850 MtrunA17_Chr1g0211131 29.508 122 76 3 4 115 823 944 4.46e-12 62.8
Msa1252850 MtrunA17_Chr1g0198021 27.642 123 79 3 3 115 137 259 7.33e-12 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1252850 AT1G64230.2 91.892 148 12 0 1 148 1 148 7.83e-103 291
Msa1252850 AT1G64230.1 91.892 148 12 0 1 148 1 148 7.83e-103 291
Msa1252850 AT5G41700.5 91.892 148 12 0 1 148 1 148 1.21e-102 290
Msa1252850 AT5G41700.2 91.892 148 12 0 1 148 1 148 1.21e-102 290
Msa1252850 AT5G41700.1 91.892 148 12 0 1 148 1 148 1.21e-102 290
Msa1252850 AT5G53300.2 92.568 148 11 0 1 148 1 148 1.80e-102 290
Msa1252850 AT5G53300.4 92.568 148 11 0 1 148 1 148 1.80e-102 290
Msa1252850 AT5G53300.1 92.568 148 11 0 1 148 1 148 1.80e-102 290
Msa1252850 AT4G27960.1 91.892 148 12 0 1 148 1 148 3.56e-102 289
Msa1252850 AT4G27960.2 91.892 148 12 0 1 148 31 178 2.25e-101 288
Msa1252850 AT3G08690.2 90.541 148 14 0 1 148 1 148 4.11e-101 286
Msa1252850 AT3G08690.1 90.541 148 14 0 1 148 1 148 4.11e-101 286
Msa1252850 AT5G56150.1 88.514 148 17 0 1 148 1 148 1.83e-100 285
Msa1252850 AT5G41700.4 90.604 149 13 1 1 148 1 149 8.15e-100 283
Msa1252850 AT1G64230.3 85.987 157 13 1 1 148 1 157 2.05e-98 280
Msa1252850 AT2G16740.1 85.034 147 22 0 1 147 1 147 1.65e-95 272
Msa1252850 AT1G64230.5 71.053 190 13 1 1 148 1 190 6.21e-94 270
Msa1252850 AT1G64230.4 71.053 190 13 1 1 148 1 190 6.21e-94 270
Msa1252850 AT3G08700.2 78.523 149 31 1 1 148 1 149 9.05e-87 250
Msa1252850 AT3G08700.1 78.523 149 31 1 1 148 1 149 9.05e-87 250
Msa1252850 AT5G41700.3 90.385 104 10 0 1 104 1 104 3.50e-68 203
Msa1252850 AT5G53300.3 88.991 109 10 1 1 107 1 109 1.24e-67 200
Msa1252850 AT5G56150.2 88.350 103 12 0 1 103 1 103 7.15e-67 198
Msa1252850 AT3G13550.1 46.897 145 77 0 2 146 37 181 1.38e-52 165
Msa1252850 AT1G78870.2 50.345 145 72 0 4 148 8 152 3.53e-48 152
Msa1252850 AT1G16890.2 49.655 145 73 0 4 148 8 152 5.41e-48 152
Msa1252850 AT1G14400.1 47.260 146 72 1 2 142 5 150 3.22e-45 145
Msa1252850 AT1G14400.2 47.260 146 72 1 2 142 5 150 3.22e-45 145
Msa1252850 AT1G16890.3 47.403 154 72 1 4 148 8 161 3.43e-45 145
Msa1252850 AT5G62540.1 50.376 133 66 0 2 134 5 137 6.10e-45 144
Msa1252850 AT2G02760.1 46.575 146 73 1 2 142 5 150 7.15e-45 144
Msa1252850 AT2G02760.2 46.575 146 73 1 2 142 5 150 7.15e-45 144
Msa1252850 AT2G02760.4 46.575 146 73 1 2 142 5 150 7.15e-45 144
Msa1252850 AT2G02760.3 46.575 146 73 1 2 142 5 150 7.15e-45 144
Msa1252850 AT1G36340.2 46.897 145 76 1 2 146 9 152 1.27e-43 141
Msa1252850 AT1G36340.1 46.897 145 76 1 2 146 9 152 1.27e-43 141
Msa1252850 AT3G13550.2 50.000 114 57 0 2 115 37 150 2.99e-42 138
Msa1252850 AT1G16890.1 52.941 119 56 0 30 148 1 119 5.35e-42 136
Msa1252850 AT1G78870.4 52.941 119 56 0 30 148 1 119 1.21e-41 135
Msa1252850 AT1G78870.1 52.500 120 56 1 30 148 1 120 6.59e-40 130
Msa1252850 AT5G50870.1 45.833 144 76 2 5 146 6 149 1.43e-39 132
Msa1252850 AT5G50870.2 42.581 155 76 3 5 146 6 160 3.57e-36 124
Msa1252850 AT3G24515.1 43.949 157 75 3 3 146 8 164 4.61e-35 125
Msa1252850 AT2G32790.1 50.794 126 58 2 25 148 54 177 6.55e-34 117
Msa1252850 AT5G25760.1 40.136 147 84 3 5 147 7 153 7.05e-33 114
Msa1252850 AT5G25760.2 40.136 147 84 3 5 147 7 153 7.05e-33 114
Msa1252850 AT1G78870.3 48.571 105 54 0 4 108 8 112 3.01e-32 111
Msa1252850 AT3G24515.3 45.902 122 62 1 29 146 68 189 5.69e-32 118
Msa1252850 AT3G20060.1 42.424 132 75 1 4 135 39 169 6.28e-32 112
Msa1252850 AT1G50490.1 43.182 132 74 1 4 135 38 168 1.86e-31 111
Msa1252850 AT3G20060.2 44.737 114 62 1 22 135 12 124 5.54e-30 106
Msa1252850 AT2G46030.5 36.486 148 91 3 1 146 1 147 1.19e-28 104
Msa1252850 AT2G46030.1 36.486 148 91 3 1 146 1 147 1.19e-28 104
Msa1252850 AT2G46030.3 36.486 148 91 3 1 146 73 219 2.92e-28 105
Msa1252850 AT2G46030.4 39.024 123 73 2 26 146 28 150 9.94e-28 102
Msa1252850 AT2G46030.2 39.024 123 73 2 26 146 28 150 9.94e-28 102
Msa1252850 AT3G57870.1 34.211 152 93 2 1 145 5 156 3.34e-27 99.8
Msa1252850 AT5G41340.1 34.459 148 94 3 1 146 1 147 2.01e-26 98.6
Msa1252850 AT1G63800.1 35.135 148 93 3 1 146 1 147 2.23e-26 98.6
Msa1252850 AT1G63800.2 37.398 123 75 2 26 146 10 132 3.26e-26 97.4
Msa1252850 AT5G05080.2 35.664 143 92 0 4 146 13 155 3.60e-26 99.4
Msa1252850 AT5G05080.3 35.664 143 92 0 4 146 13 155 3.60e-26 99.4
Msa1252850 AT5G05080.1 35.664 143 92 0 4 146 13 155 3.60e-26 99.4
Msa1252850 AT5G05080.4 35.664 143 92 0 4 146 13 155 3.60e-26 99.4
Msa1252850 AT3G55380.1 34.815 135 74 2 15 135 19 153 8.97e-26 96.3
Msa1252850 AT4G36800.2 35.036 137 84 3 5 139 34 167 1.30e-25 96.3
Msa1252850 AT4G36800.1 35.036 137 84 3 5 139 34 167 1.30e-25 96.3
Msa1252850 AT5G59300.1 32.639 144 83 2 15 144 18 161 1.61e-23 90.5
Msa1252850 AT3G46460.1 31.944 144 84 2 15 144 18 161 2.64e-23 90.1
Msa1252850 AT2G18600.1 33.577 137 86 3 5 139 35 168 4.48e-23 89.7
Msa1252850 AT2G18600.2 33.577 137 86 3 5 139 35 168 4.48e-23 89.7
Msa1252850 AT5G41340.2 38.462 104 62 2 45 146 9 112 8.07e-23 88.2
Msa1252850 AT3G17000.1 36.752 117 68 3 2 114 12 126 2.10e-20 85.5
Msa1252850 AT1G75440.1 38.889 108 60 3 1 107 15 117 4.36e-19 79.0
Msa1252850 AT3G55380.2 27.811 169 74 3 15 135 19 187 1.17e-18 79.0
Msa1252850 AT1G17280.9 35.043 117 67 3 4 115 8 120 1.44e-18 79.3
Msa1252850 AT1G17280.7 35.043 117 67 3 4 115 8 120 1.44e-18 79.3
Msa1252850 AT1G17280.6 35.043 117 67 3 4 115 8 120 1.44e-18 79.3
Msa1252850 AT1G17280.2 35.043 117 67 3 4 115 8 120 1.44e-18 79.3
Msa1252850 AT1G17280.5 35.043 117 67 3 4 115 8 120 1.44e-18 79.3
Msa1252850 AT1G17280.3 35.043 117 67 3 4 115 8 120 1.44e-18 79.3
Msa1252850 AT1G17280.1 35.043 117 67 3 4 115 8 120 1.44e-18 79.3
Msa1252850 AT1G17280.8 35.043 117 67 3 4 115 8 120 1.44e-18 79.3
Msa1252850 AT1G45050.1 37.864 103 62 2 1 102 15 116 1.49e-18 77.4
Msa1252850 AT5G50430.1 35.043 117 67 3 4 115 8 120 1.76e-18 79.3
Msa1252850 AT5G50430.2 35.043 117 67 3 4 115 8 120 1.76e-18 79.3
Msa1252850 AT5G42990.1 38.835 103 61 2 1 102 15 116 1.79e-18 77.4
Msa1252850 AT4G36410.1 36.111 108 63 3 1 107 15 117 4.20e-18 76.3
Msa1252850 AT1G17280.4 32.520 123 68 3 4 115 8 126 2.70e-17 75.9
Msa1252850 AT3G46460.3 29.730 111 65 1 47 144 9 119 3.78e-16 70.5
Msa1252850 AT3G46460.2 29.730 111 65 1 47 144 9 119 3.78e-16 70.5
Msa1252850 AT3G15355.1 28.289 152 96 4 3 144 334 482 3.91e-12 63.2
Msa1252850 AT1G45050.2 34.831 89 56 2 1 88 15 102 5.32e-12 59.3
Msa1252850 AT5G50430.3 30.769 117 59 4 4 115 8 107 2.46e-11 59.7
Msa1252850 AT1G53025.2 26.000 150 98 4 4 143 274 420 4.32e-11 60.1
Msa1252850 AT1G53025.1 26.000 150 98 4 4 143 274 420 4.69e-11 60.1

Find 84 sgRNAs with CRISPR-Local

Find 211 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGGGCTCCATTGCTCTTTC+AGG 0.120840 8_2:-50010788 None:intergenic
CTACCGTTACTGTTGATATT+AGG 0.137672 8_2:-50010750 None:intergenic
GACTCTCTTATCTGCCATTT+TGG 0.148948 8_2:+50011460 Msa1252850:three_prime_UTR
CTTAACCCATGGCATATTTC+TGG 0.152621 8_2:-50011352 None:intergenic
ACCTTAGGGTTTGAGGGTTT+GGG 0.161584 8_2:-50008142 None:intergenic
GACCTTAGGGTTTGAGGGTT+TGG 0.177331 8_2:-50008143 None:intergenic
ATTTCATTTAGTTTACATTA+AGG 0.249909 8_2:+50011564 Msa1252850:three_prime_UTR
CCATTGGCAAGCTACAATTA+TGG 0.267578 8_2:+50009564 Msa1252850:CDS
CAGAAATATGCCATGGGTTA+AGG 0.286801 8_2:+50011353 Msa1252850:CDS
TTGTACATATGAGCAATTTC+AGG 0.311190 8_2:-50011287 None:intergenic
TACCGTTACTGTTGATATTA+GGG 0.326660 8_2:-50010749 None:intergenic
CATTGGCAAGCTACAATTAT+GGG 0.330983 8_2:+50009565 Msa1252850:CDS
CCTCCTGCCTCTTGCAGTGC+TGG 0.337467 8_2:+50008354 Msa1252850:CDS
TTTCATTTAGTTTACATTAA+GGG 0.347300 8_2:+50011565 Msa1252850:three_prime_UTR
TTCACTGACCTTAGGGTTTG+AGG 0.353589 8_2:-50008149 None:intergenic
TTAACCCATGGCATATTTCT+GGG 0.371740 8_2:-50011351 None:intergenic
AATAATGCACAGTTCCAAAA+TGG 0.372760 8_2:-50011474 None:intergenic
AGAAATATGCCATGGGTTAA+GGG 0.381920 8_2:+50011354 Msa1252850:CDS
TGATGTGATTCACTGACCTT+AGG 0.383092 8_2:-50008157 None:intergenic
CCAGGAGATAGCCCATTTGC+GGG 0.390432 8_2:+50009589 Msa1252850:CDS
TTCCTTATTGATCCGCTTTG+AGG 0.396653 8_2:-50008310 None:intergenic
AGAAACACACCTCCCGCAAA+TGG 0.400575 8_2:-50009601 None:intergenic
ACCTTGGATATTGTGAGGGC+AGG 0.405744 8_2:-50010807 None:intergenic
TCAGGGACCAGAGGATCATC+TGG 0.406568 8_2:-50011269 None:intergenic
TCACTGACCTTAGGGTTTGA+GGG 0.417210 8_2:-50008148 None:intergenic
GGCCTCAAAGCGGATCAATA+AGG 0.439633 8_2:+50008308 Msa1252850:CDS
GAATTTGGGTTTACCTTGGG+TGG 0.439702 8_2:-50009661 None:intergenic
ATCAGTCAACAGAGAACAAA+TGG 0.443192 8_2:-50011240 None:intergenic
AAAAGCAGAAGAGAAGAAGA+AGG 0.444499 8_2:-50008105 None:intergenic
CCCAGGAGATAGCCCATTTG+CGG 0.455352 8_2:+50009588 Msa1252850:CDS
AGATAAAATGTAAAACATCT+TGG 0.459599 8_2:-50011381 None:intergenic
GCGGATCAATAAGGAATTGA+AGG 0.460462 8_2:+50008317 Msa1252850:CDS
CCGCAAATGGGCTATCTCCT+GGG 0.465958 8_2:-50009588 None:intergenic
GATGTGATTCACTGACCTTA+GGG 0.473602 8_2:-50008156 None:intergenic
TCCCAACCCAGATGATCCTC+TGG 0.480906 8_2:+50011262 Msa1252850:CDS
ACCAGAGGATCATCTGGGTT+GGG 0.483549 8_2:-50011263 None:intergenic
CCTTAGGGTTTGAGGGTTTG+GGG 0.487224 8_2:-50008141 None:intergenic
TTTACCTTGGGTGGTTTGAA+AGG 0.493166 8_2:-50009652 None:intergenic
TGTACATATGAGCAATTTCA+GGG 0.503724 8_2:-50011286 None:intergenic
ATGAGGCCACTGCTCGGTCA+TGG 0.505125 8_2:+50011327 Msa1252850:CDS
GAAACACACCTCCCGCAAAT+GGG 0.512424 8_2:-50009600 None:intergenic
TGTGCAAATTCACTTCCCTC+CGG 0.514742 8_2:+50009624 Msa1252850:CDS
AGGGTTATGCTATGCGTTTG+AGG 0.517584 8_2:-50008085 None:intergenic
GGTGGTTTGAAAGGATAATC+CGG 0.519248 8_2:-50009643 None:intergenic
GACCAGAGGATCATCTGGGT+TGG 0.531915 8_2:-50011264 None:intergenic
GAGCGTTCAGTATTATATAG+TGG 0.533943 8_2:-50008063 None:intergenic
CCTTGGATATTGTGAGGGCA+GGG 0.540091 8_2:-50010806 None:intergenic
AAAGCAGAAGAGAAGAAGAA+GGG 0.543752 8_2:-50008104 None:intergenic
ATACCAGCACTGCAAGAGGC+AGG 0.544134 8_2:-50008357 None:intergenic
CAAGCTACAATTATGGGCCC+AGG 0.551929 8_2:+50009571 Msa1252850:CDS
GATCCGCTTTGAGGCCATCT+CGG 0.560812 8_2:-50008301 None:intergenic
GAGTGACAAAGCTAAGTATG+AGG 0.561393 8_2:+50011310 Msa1252850:CDS
GGAACTGTGCATTATTGGAA+AGG 0.562558 8_2:+50011481 Msa1252850:three_prime_UTR
ATTGCTCTTTCAGGATGTCA+AGG 0.568753 8_2:-50010779 None:intergenic
TGGAACATATCATCAGCGAC+AGG 0.569142 8_2:-50009544 None:intergenic
CCCCAAACCCTCAAACCCTA+AGG 0.572676 8_2:+50008141 Msa1252850:five_prime_UTR
GAAAATACCAGCACTGCAAG+AGG 0.581847 8_2:-50008361 None:intergenic
CTAAGTATGAGGCCACTGCT+CGG 0.591968 8_2:+50011321 Msa1252850:CDS
AGATCACCTTGGATATTGTG+AGG 0.593954 8_2:-50010812 None:intergenic
CCCTGCCCTCACAATATCCA+AGG 0.594906 8_2:+50010806 Msa1252850:CDS
ATGGACCCAGAAATATGCCA+TGG 0.598403 8_2:+50011346 Msa1252850:CDS
CTTGGCCATCCCTTAACCCA+TGG 0.604057 8_2:-50011363 None:intergenic
GATCACCTTGGATATTGTGA+GGG 0.604360 8_2:-50010811 None:intergenic
CAGGGACCAGAGGATCATCT+GGG 0.604692 8_2:-50011268 None:intergenic
CACCCTAATATCAACAGTAA+CGG 0.606586 8_2:+50010747 Msa1252850:CDS
GGAATTGAAGGACTTGCAGA+AGG 0.606883 8_2:+50008329 Msa1252850:CDS
TTGACATCCTGAAAGAGCAA+TGG 0.608625 8_2:+50010781 Msa1252850:CDS
ATATGCCATGGGTTAAGGGA+TGG 0.608734 8_2:+50011358 Msa1252850:exon
CCATAATTGTAGCTTGCCAA+TGG 0.608901 8_2:-50009564 None:intergenic
TTATCCTTTCAAACCACCCA+AGG 0.609431 8_2:+50009648 Msa1252850:CDS
TCGCTGATGATATGTTCCAT+TGG 0.614388 8_2:+50009548 Msa1252850:CDS
TGTGAACAGTGTTACCGAGA+TGG 0.626407 8_2:+50008287 Msa1252850:intron
CGTTACTGTTGATATTAGGG+TGG 0.631865 8_2:-50010746 None:intergenic
CTGGGTCCATGACCGAGCAG+TGG 0.634278 8_2:-50011333 None:intergenic
TCAGGTTTCATTCCGCACAA+AGG 0.634356 8_2:+50010719 Msa1252850:intron
GGAACATATCATCAGCGACA+GGG 0.652409 8_2:-50009543 None:intergenic
TAGGGTGGAAAACCTTTGTG+CGG 0.653142 8_2:-50010731 None:intergenic
TGGACCCAGAAATATGCCAT+GGG 0.659562 8_2:+50011347 Msa1252850:CDS
TGAGCAATTTCAGGGACCAG+AGG 0.676101 8_2:-50011278 None:intergenic
CCAGCACTGCAAGAGGCAGG+AGG 0.680239 8_2:-50008354 None:intergenic
GTTTGAAAGGATAATCCGGA+GGG 0.687186 8_2:-50009639 None:intergenic
GGAGATAGCCCATTTGCGGG+AGG 0.688783 8_2:+50009592 Msa1252850:CDS
GGTTTGAAAGGATAATCCGG+AGG 0.710430 8_2:-50009640 None:intergenic
TTACCGAGATGGCCTCAAAG+CGG 0.762010 8_2:+50008298 Msa1252850:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAATTTTAACAAAGTTTT+AGG + chr8_2:50008661-50008680 Msa1252850:intron 10.0%
!! AAATTAAATATCAATTGTAT+TGG + chr8_2:50009944-50009963 Msa1252850:intron 10.0%
!!! CATTATTTAATTTCATTAAG+TGG - chr8_2:50008591-50008610 None:intergenic 15.0%
!! TGATTATGATAACTTAAAAT+TGG + chr8_2:50008877-50008896 Msa1252850:intron 15.0%
!!! TATTTGAAGCAAAAATAATT+GGG - chr8_2:50010116-50010135 None:intergenic 15.0%
!! TTAACGTAAAAAAAAACAGA+GGG - chr8_2:50008456-50008475 None:intergenic 20.0%
!! ATTAACGTAAAAAAAAACAG+AGG - chr8_2:50008457-50008476 None:intergenic 20.0%
!!! CGAAAACTTAATATTGATTT+TGG + chr8_2:50008795-50008814 Msa1252850:intron 20.0%
!!! TAAGTTATCATAATCACTTT+TGG - chr8_2:50008873-50008892 None:intergenic 20.0%
!!! AATGACTTATTTTATTGCTT+TGG + chr8_2:50009207-50009226 Msa1252850:intron 20.0%
!! TCAAAAGACAATTATTAAAG+AGG - chr8_2:50009446-50009465 None:intergenic 20.0%
!!! CTTGTTTTTAATTTTTATGC+AGG + chr8_2:50009520-50009539 Msa1252850:intron 20.0%
!!! TTAAATTGTGGTTTTAACAA+CGG - chr8_2:50010004-50010023 None:intergenic 20.0%
!!! GTATTTGAAGCAAAAATAAT+TGG - chr8_2:50010117-50010136 None:intergenic 20.0%
!! TAAAATGTAAGATCATAAGA+AGG - chr8_2:50010322-50010341 None:intergenic 20.0%
!! CCATTAACTACAATTAATAT+GGG - chr8_2:50010948-50010967 None:intergenic 20.0%
!! TCCATTAACTACAATTAATA+TGG - chr8_2:50010949-50010968 None:intergenic 20.0%
!!! AATAAATAAGAGTGTATTAG+TGG + chr8_2:50010991-50011010 Msa1252850:intron 20.0%
!!! AATAAATAAGAGTGTATTAG+TGG + chr8_2:50010991-50011010 Msa1252850:intron 20.0%
!!! TCTAAAATGACAAATTATAC+TGG + chr8_2:50011125-50011144 Msa1252850:intron 20.0%
!! AGATAAAATGTAAAACATCT+TGG - chr8_2:50011384-50011403 None:intergenic 20.0%
! TATCAAACACATATATTCCT+CGG + chr8_2:50008398-50008417 Msa1252850:intron 25.0%
!!! TATTGATTTTGGAATGTTTG+AGG + chr8_2:50008806-50008825 Msa1252850:intron 25.0%
!! TGAATGTTTAGATTCTCTTT+TGG + chr8_2:50008842-50008861 Msa1252850:intron 25.0%
!! GAATGTTTAGATTCTCTTTT+GGG + chr8_2:50008843-50008862 Msa1252850:intron 25.0%
!!! GTTTTGACTTTTGATATGTT+TGG + chr8_2:50008899-50008918 Msa1252850:intron 25.0%
! CCAGTTAAAACAAATTTCAT+AGG - chr8_2:50008936-50008955 None:intergenic 25.0%
!!! CCTATGAAATTTGTTTTAAC+TGG + chr8_2:50008933-50008952 Msa1252850:intron 25.0%
! AAACTTGAATCATTTCATGT+GGG - chr8_2:50009253-50009272 None:intergenic 25.0%
! TAAACTTGAATCATTTCATG+TGG - chr8_2:50009254-50009273 None:intergenic 25.0%
! ATTTGCATAAAGCAGAATTT+GGG - chr8_2:50009678-50009697 None:intergenic 25.0%
! AGCAAAAATAATTGGGATTT+GGG - chr8_2:50010109-50010128 None:intergenic 25.0%
! AAGCAAAAATAATTGGGATT+TGG - chr8_2:50010110-50010129 None:intergenic 25.0%
!!! TATTTTTGCTTCAAATACAC+TGG + chr8_2:50010119-50010138 Msa1252850:intron 25.0%
!! ATTTTTGCTTCAAATACACT+GGG + chr8_2:50010120-50010139 Msa1252850:intron 25.0%
! TCCTCAGTAATTATATTTGT+AGG + chr8_2:50010363-50010382 Msa1252850:intron 25.0%
! TCCTACAAATATAATTACTG+AGG - chr8_2:50010367-50010386 None:intergenic 25.0%
! TTCCAATATTACCAACAAAA+GGG - chr8_2:50010473-50010492 None:intergenic 25.0%
! CATTCATTATCAATATGTTC+AGG + chr8_2:50010701-50010720 Msa1252850:intron 25.0%
! ATAGAATATTAAGATCACCT+TGG - chr8_2:50010826-50010845 None:intergenic 25.0%
! CCCATATTAATTGTAGTTAA+TGG + chr8_2:50010945-50010964 Msa1252850:intron 25.0%
!!! AAGTGAATGGAATAGTTTTT+TGG + chr8_2:50011158-50011177 Msa1252850:intron 25.0%
!! TTTGTTTGAATTTTCTTGTC+AGG + chr8_2:50011181-50011200 Msa1252850:intron 25.0%
!! TTGTTTGAATTTTCTTGTCA+GGG + chr8_2:50011182-50011201 Msa1252850:intron 25.0%
!! CTGAAATATTAGAATTTTGC+AGG + chr8_2:50011208-50011227 Msa1252850:intron 25.0%
ACAGAGGGAATAATAAATCA+AGG - chr8_2:50008441-50008460 None:intergenic 30.0%
ACACATCCATATACATATAG+GGG - chr8_2:50008726-50008745 None:intergenic 30.0%
CACACATCCATATACATATA+GGG - chr8_2:50008727-50008746 None:intergenic 30.0%
ACACACATCCATATACATAT+AGG - chr8_2:50008728-50008747 None:intergenic 30.0%
TTGTATGCATATTCACCTTT+GGG + chr8_2:50008755-50008774 Msa1252850:intron 30.0%
!!! GTCAATTTTTTTTCTCCCAA+AGG - chr8_2:50008773-50008792 None:intergenic 30.0%
!!! AATTTGTTTTAACTGGAAGC+TGG + chr8_2:50008940-50008959 Msa1252850:intron 30.0%
AAGCATTAAAATAAGTCGAC+AGG - chr8_2:50009124-50009143 None:intergenic 30.0%
!!! GTCGACTTATTTTAATGCTT+TGG + chr8_2:50009124-50009143 Msa1252850:intron 30.0%
ATTCTGATACTACAAACATG+TGG - chr8_2:50009171-50009190 None:intergenic 30.0%
TAAGATGAGATAAAGTGAAC+TGG + chr8_2:50009280-50009299 Msa1252850:intron 30.0%
AAGATGAGATAAAGTGAACT+GGG + chr8_2:50009281-50009300 Msa1252850:intron 30.0%
CATTTGCATAAAGCAGAATT+TGG - chr8_2:50009679-50009698 None:intergenic 30.0%
AATGTATAACAGACACATGT+TGG + chr8_2:50009695-50009714 Msa1252850:intron 30.0%
ATGTATAACAGACACATGTT+GGG + chr8_2:50009696-50009715 Msa1252850:intron 30.0%
TGATTTCCATTGTTATATGC+TGG - chr8_2:50009831-50009850 None:intergenic 30.0%
!!! AACTCCAAATCTTTTTTGCA+AGG + chr8_2:50009877-50009896 Msa1252850:intron 30.0%
CGATCATGCAATTTAAATTG+TGG - chr8_2:50010016-50010035 None:intergenic 30.0%
GTCATCTTCTTTATGACATA+TGG + chr8_2:50010071-50010090 Msa1252850:intron 30.0%
GCAAAAATAATTGGGATTTG+GGG - chr8_2:50010108-50010127 None:intergenic 30.0%
! GTGTTTGAAGCAAAAGTAAT+TGG - chr8_2:50010159-50010178 None:intergenic 30.0%
TCAGAATCAAACATAACACA+TGG - chr8_2:50010284-50010303 None:intergenic 30.0%
TAATTACTGAGGATCAGAAT+GGG - chr8_2:50010356-50010375 None:intergenic 30.0%
ATAATTACTGAGGATCAGAA+TGG - chr8_2:50010357-50010376 None:intergenic 30.0%
TCCAATATTACCAACAAAAG+GGG - chr8_2:50010472-50010491 None:intergenic 30.0%
CTTCCAATATTACCAACAAA+AGG - chr8_2:50010474-50010493 None:intergenic 30.0%
ACACAAAGTGGAATTATGAA+GGG - chr8_2:50010667-50010686 None:intergenic 30.0%
TACCGTTACTGTTGATATTA+GGG - chr8_2:50010752-50010771 None:intergenic 30.0%
AAATGAGCTTCATTTACGAA+AGG + chr8_2:50010921-50010940 Msa1252850:intron 30.0%
TGTACATATGAGCAATTTCA+GGG - chr8_2:50011289-50011308 None:intergenic 30.0%
TTGTACATATGAGCAATTTC+AGG - chr8_2:50011290-50011309 None:intergenic 30.0%
AATAATGCACAGTTCCAAAA+TGG - chr8_2:50011477-50011496 None:intergenic 30.0%
!!! ATTTTGGAACTGTGCATTAT+TGG + chr8_2:50011476-50011495 Msa1252850:three_prime_UTR 30.0%
GAGCGTTCAGTATTATATAG+TGG - chr8_2:50008066-50008085 None:intergenic 35.0%
AAAGCAGAAGAGAAGAAGAA+GGG - chr8_2:50008107-50008126 None:intergenic 35.0%
AAAAGCAGAAGAGAAGAAGA+AGG - chr8_2:50008108-50008127 None:intergenic 35.0%
ACACATATATTCCTCGGATT+AGG + chr8_2:50008404-50008423 Msa1252850:intron 35.0%
CTTGTATGCATATTCACCTT+TGG + chr8_2:50008754-50008773 Msa1252850:intron 35.0%
!! TTTTAACTGGAAGCTGGATT+AGG + chr8_2:50008946-50008965 Msa1252850:intron 35.0%
ATTCACCACAACATTGATAG+CGG - chr8_2:50009039-50009058 None:intergenic 35.0%
TGTTGTGGTGAATCTTTAGT+TGG + chr8_2:50009046-50009065 Msa1252850:intron 35.0%
AGATGAGATAAAGTGAACTG+GGG + chr8_2:50009282-50009301 Msa1252850:intron 35.0%
!! TACTTCTAGTTCTAGCAGAA+GGG - chr8_2:50009319-50009338 None:intergenic 35.0%
!! TTACTTCTAGTTCTAGCAGA+AGG - chr8_2:50009320-50009339 None:intergenic 35.0%
CATTGGCAAGCTACAATTAT+GGG + chr8_2:50009565-50009584 Msa1252850:CDS 35.0%
CTTTAGCCAGCATATAACAA+TGG + chr8_2:50009822-50009841 Msa1252850:intron 35.0%
CTGTCCTTGCAAAAAAGATT+TGG - chr8_2:50009884-50009903 None:intergenic 35.0%
GAATCAAACATAACACATGG+TGG - chr8_2:50010281-50010300 None:intergenic 35.0%
ACAAGATCATGCCTAAGATT+GGG - chr8_2:50010425-50010444 None:intergenic 35.0%
AACAAGATCATGCCTAAGAT+TGG - chr8_2:50010426-50010445 None:intergenic 35.0%
!!! TCCCCTTTTGTTGGTAATAT+TGG + chr8_2:50010468-50010487 Msa1252850:intron 35.0%
CAACTGGCTACACATAATTA+GGG - chr8_2:50010566-50010585 None:intergenic 35.0%
ACAACTGGCTACACATAATT+AGG - chr8_2:50010567-50010586 None:intergenic 35.0%
GCATCTCTATAATGAACAAC+TGG - chr8_2:50010582-50010601 None:intergenic 35.0%
CACACAAAGTGGAATTATGA+AGG - chr8_2:50010668-50010687 None:intergenic 35.0%
ATACAAACACTCACACAAAG+TGG - chr8_2:50010679-50010698 None:intergenic 35.0%
CACCCTAATATCAACAGTAA+CGG + chr8_2:50010747-50010766 Msa1252850:CDS 35.0%
CTACCGTTACTGTTGATATT+AGG - chr8_2:50010753-50010772 None:intergenic 35.0%
TGGACAAGTGATTAAGTGAA+TGG + chr8_2:50011145-50011164 Msa1252850:intron 35.0%
ATCAGTCAACAGAGAACAAA+TGG - chr8_2:50011243-50011262 None:intergenic 35.0%
TTAACCCATGGCATATTTCT+GGG - chr8_2:50011354-50011373 None:intergenic 35.0%
! AGAAATATGCCATGGGTTAA+GGG + chr8_2:50011354-50011373 Msa1252850:CDS 35.0%
GATGTGATTCACTGACCTTA+GGG - chr8_2:50008159-50008178 None:intergenic 40.0%
TGATGTGATTCACTGACCTT+AGG - chr8_2:50008160-50008179 None:intergenic 40.0%
TTCCTTATTGATCCGCTTTG+AGG - chr8_2:50008313-50008332 None:intergenic 40.0%
GCGGATCAATAAGGAATTGA+AGG + chr8_2:50008317-50008336 Msa1252850:CDS 40.0%
GACATATGTCACGTGCTTTA+GGG + chr8_2:50008519-50008538 Msa1252850:intron 40.0%
TACGCACCCCTATATGTATA+TGG + chr8_2:50008717-50008736 Msa1252850:intron 40.0%
GATGAGATAAAGTGAACTGG+GGG + chr8_2:50009283-50009302 Msa1252850:intron 40.0%
TCGCTGATGATATGTTCCAT+TGG + chr8_2:50009548-50009567 Msa1252850:CDS 40.0%
! CCATAATTGTAGCTTGCCAA+TGG - chr8_2:50009567-50009586 None:intergenic 40.0%
CCATTGGCAAGCTACAATTA+TGG + chr8_2:50009564-50009583 Msa1252850:CDS 40.0%
GTTTGAAAGGATAATCCGGA+GGG - chr8_2:50009642-50009661 None:intergenic 40.0%
GGTGGTTTGAAAGGATAATC+CGG - chr8_2:50009646-50009665 None:intergenic 40.0%
TTATCCTTTCAAACCACCCA+AGG + chr8_2:50009648-50009667 Msa1252850:CDS 40.0%
TTTACCTTGGGTGGTTTGAA+AGG - chr8_2:50009655-50009674 None:intergenic 40.0%
! GCAGAATTTGGGTTTACCTT+GGG - chr8_2:50009667-50009686 None:intergenic 40.0%
! AGCAGAATTTGGGTTTACCT+TGG - chr8_2:50009668-50009687 None:intergenic 40.0%
ACATGTTGGGCTATATGTCT+AGG + chr8_2:50009709-50009728 Msa1252850:intron 40.0%
TCACCATTCTACACAAGTAG+TGG + chr8_2:50010043-50010062 Msa1252850:intron 40.0%
AGGATCTTACGATCCTTGTT+AGG + chr8_2:50010383-50010402 Msa1252850:intron 40.0%
GGGATAGCAAAATCCTAACA+AGG - chr8_2:50010399-50010418 None:intergenic 40.0%
! TGTTTTGCTTCCCCTTTTGT+TGG + chr8_2:50010459-50010478 Msa1252850:intron 40.0%
!! TGGTGGATTGAATCAGATTG+GGG - chr8_2:50010543-50010562 None:intergenic 40.0%
!! GTGGTGGATTGAATCAGATT+GGG - chr8_2:50010544-50010563 None:intergenic 40.0%
CGTTACTGTTGATATTAGGG+TGG - chr8_2:50010749-50010768 None:intergenic 40.0%
ATTGCTCTTTCAGGATGTCA+AGG - chr8_2:50010782-50010801 None:intergenic 40.0%
TTGACATCCTGAAAGAGCAA+TGG + chr8_2:50010781-50010800 Msa1252850:CDS 40.0%
GATCACCTTGGATATTGTGA+GGG - chr8_2:50010814-50010833 None:intergenic 40.0%
AGATCACCTTGGATATTGTG+AGG - chr8_2:50010815-50010834 None:intergenic 40.0%
GAGTGACAAAGCTAAGTATG+AGG + chr8_2:50011310-50011329 Msa1252850:CDS 40.0%
CTTAACCCATGGCATATTTC+TGG - chr8_2:50011355-50011374 None:intergenic 40.0%
! CAGAAATATGCCATGGGTTA+AGG + chr8_2:50011353-50011372 Msa1252850:CDS 40.0%
!! GACTCTCTTATCTGCCATTT+TGG + chr8_2:50011460-50011479 Msa1252850:three_prime_UTR 40.0%
GGAACTGTGCATTATTGGAA+AGG + chr8_2:50011481-50011500 Msa1252850:three_prime_UTR 40.0%
AGGGTTATGCTATGCGTTTG+AGG - chr8_2:50008088-50008107 None:intergenic 45.0%
ACCTTAGGGTTTGAGGGTTT+GGG - chr8_2:50008145-50008164 None:intergenic 45.0%
TCACTGACCTTAGGGTTTGA+GGG - chr8_2:50008151-50008170 None:intergenic 45.0%
TTCACTGACCTTAGGGTTTG+AGG - chr8_2:50008152-50008171 None:intergenic 45.0%
TGTGAACAGTGTTACCGAGA+TGG + chr8_2:50008287-50008306 Msa1252850:intron 45.0%
GGAATTGAAGGACTTGCAGA+AGG + chr8_2:50008329-50008348 Msa1252850:CDS 45.0%
GAAAATACCAGCACTGCAAG+AGG - chr8_2:50008364-50008383 None:intergenic 45.0%
CTATAAACACGCCTAATCCG+AGG - chr8_2:50008418-50008437 None:intergenic 45.0%
CGACATATGTCACGTGCTTT+AGG + chr8_2:50008518-50008537 Msa1252850:intron 45.0%
!! ATGTCACGTGCTTTAGGGTT+TGG + chr8_2:50008524-50008543 Msa1252850:intron 45.0%
!! TGTCACGTGCTTTAGGGTTT+GGG + chr8_2:50008525-50008544 Msa1252850:intron 45.0%
ATGCTCCGCTATCAATGTTG+TGG + chr8_2:50009031-50009050 Msa1252850:intron 45.0%
GGAACATATCATCAGCGACA+GGG - chr8_2:50009546-50009565 None:intergenic 45.0%
TGGAACATATCATCAGCGAC+AGG - chr8_2:50009547-50009566 None:intergenic 45.0%
TGTGCAAATTCACTTCCCTC+CGG + chr8_2:50009624-50009643 Msa1252850:CDS 45.0%
GGTTTGAAAGGATAATCCGG+AGG - chr8_2:50009643-50009662 None:intergenic 45.0%
! GAATTTGGGTTTACCTTGGG+TGG - chr8_2:50009664-50009683 None:intergenic 45.0%
CCACCACTACTTGTGTAGAA+TGG - chr8_2:50010049-50010068 None:intergenic 45.0%
CCATTCTACACAAGTAGTGG+TGG + chr8_2:50010046-50010065 Msa1252850:intron 45.0%
TTCAAATACACTGGGAGCGA+TGG + chr8_2:50010128-50010147 Msa1252850:intron 45.0%
GATCAGAATGGGTAGCAAGA+TGG - chr8_2:50010345-50010364 None:intergenic 45.0%
TCATGCCTAAGATTGGGAGA+GGG - chr8_2:50010419-50010438 None:intergenic 45.0%
ATCATGCCTAAGATTGGGAG+AGG - chr8_2:50010420-50010439 None:intergenic 45.0%
!! GGTGGTGGATTGAATCAGAT+TGG - chr8_2:50010545-50010564 None:intergenic 45.0%
GCTACACATAATTAGGGTGG+TGG - chr8_2:50010560-50010579 None:intergenic 45.0%
CTGGCTACACATAATTAGGG+TGG - chr8_2:50010563-50010582 None:intergenic 45.0%
TCAGGTTTCATTCCGCACAA+AGG + chr8_2:50010719-50010738 Msa1252850:intron 45.0%
TAGGGTGGAAAACCTTTGTG+CGG - chr8_2:50010734-50010753 None:intergenic 45.0%
ATGGACCCAGAAATATGCCA+TGG + chr8_2:50011346-50011365 Msa1252850:CDS 45.0%
TGGACCCAGAAATATGCCAT+GGG + chr8_2:50011347-50011366 Msa1252850:CDS 45.0%
! ATATGCCATGGGTTAAGGGA+TGG + chr8_2:50011358-50011377 Msa1252850:exon 45.0%
!! TAATTAATTAAATATATTGA+TGG - chr8_2:50008217-50008236 None:intergenic 5.0%
CCTTAGGGTTTGAGGGTTTG+GGG - chr8_2:50008144-50008163 None:intergenic 50.0%
GACCTTAGGGTTTGAGGGTT+TGG - chr8_2:50008146-50008165 None:intergenic 50.0%
TTACCGAGATGGCCTCAAAG+CGG + chr8_2:50008298-50008317 Msa1252850:exon 50.0%
GGCCTCAAAGCGGATCAATA+AGG + chr8_2:50008308-50008327 Msa1252850:CDS 50.0%
! GGTTTGGGCATGGATTGTAG+AGG + chr8_2:50008540-50008559 Msa1252850:intron 50.0%
ATAAAGTGAACTGGGGGCCT+GGG + chr8_2:50009289-50009308 Msa1252850:intron 50.0%
CAAGCTACAATTATGGGCCC+AGG + chr8_2:50009571-50009590 Msa1252850:CDS 50.0%
GAAACACACCTCCCGCAAAT+GGG - chr8_2:50009603-50009622 None:intergenic 50.0%
AGAAACACACCTCCCGCAAA+TGG - chr8_2:50009604-50009623 None:intergenic 50.0%
GCTATCCCTCTCCCAATCTT+AGG + chr8_2:50010411-50010430 Msa1252850:intron 50.0%
CCTTGGATATTGTGAGGGCA+GGG - chr8_2:50010809-50010828 None:intergenic 50.0%
ACCTTGGATATTGTGAGGGC+AGG - chr8_2:50010810-50010829 None:intergenic 50.0%
ACCAGAGGATCATCTGGGTT+GGG - chr8_2:50011266-50011285 None:intergenic 50.0%
TGAGCAATTTCAGGGACCAG+AGG - chr8_2:50011281-50011300 None:intergenic 50.0%
CTAAGTATGAGGCCACTGCT+CGG + chr8_2:50011321-50011340 Msa1252850:CDS 50.0%
CCCCAAACCCTCAAACCCTA+AGG + chr8_2:50008141-50008160 Msa1252850:five_prime_UTR 55.0%
!! GATCCGCTTTGAGGCCATCT+CGG - chr8_2:50008304-50008323 None:intergenic 55.0%
ATACCAGCACTGCAAGAGGC+AGG - chr8_2:50008360-50008379 None:intergenic 55.0%
!! CGTGCTTTAGGGTTTGGGCA+TGG + chr8_2:50008530-50008549 Msa1252850:intron 55.0%
GATAAAGTGAACTGGGGGCC+TGG + chr8_2:50009288-50009307 Msa1252850:intron 55.0%
TAAAGTGAACTGGGGGCCTG+GGG + chr8_2:50009290-50009309 Msa1252850:intron 55.0%
TCTAGCAGAAGGGATTCCCC+AGG - chr8_2:50009309-50009328 None:intergenic 55.0%
!! CCGCAAATGGGCTATCTCCT+GGG - chr8_2:50009591-50009610 None:intergenic 55.0%
CCCAGGAGATAGCCCATTTG+CGG + chr8_2:50009588-50009607 Msa1252850:CDS 55.0%
CCAGGAGATAGCCCATTTGC+GGG + chr8_2:50009589-50009608 Msa1252850:CDS 55.0%
GTTGCGCTACTAGCAAGAGC+TGG - chr8_2:50010237-50010256 None:intergenic 55.0%
CAGGGCTCCATTGCTCTTTC+AGG - chr8_2:50010791-50010810 None:intergenic 55.0%
CCCTGCCCTCACAATATCCA+AGG + chr8_2:50010806-50010825 Msa1252850:CDS 55.0%
TCCCAACCCAGATGATCCTC+TGG + chr8_2:50011262-50011281 Msa1252850:CDS 55.0%
GACCAGAGGATCATCTGGGT+TGG - chr8_2:50011267-50011286 None:intergenic 55.0%
CAGGGACCAGAGGATCATCT+GGG - chr8_2:50011271-50011290 None:intergenic 55.0%
TCAGGGACCAGAGGATCATC+TGG - chr8_2:50011272-50011291 None:intergenic 55.0%
CTTGGCCATCCCTTAACCCA+TGG - chr8_2:50011366-50011385 None:intergenic 55.0%
!! CCCGCAAATGGGCTATCTCC+TGG - chr8_2:50009592-50009611 None:intergenic 60.0%
GGAGATAGCCCATTTGCGGG+AGG + chr8_2:50009592-50009611 Msa1252850:CDS 60.0%
ATGAGGCCACTGCTCGGTCA+TGG + chr8_2:50011327-50011346 Msa1252850:CDS 60.0%
CCAGCACTGCAAGAGGCAGG+AGG - chr8_2:50008357-50008376 None:intergenic 65.0%
CCTCCTGCCTCTTGCAGTGC+TGG + chr8_2:50008354-50008373 Msa1252850:CDS 65.0%
CTGGGTCCATGACCGAGCAG+TGG - chr8_2:50011336-50011355 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 50008050 50011586 50008050 ID=Msa1252850;Name=Msa1252850
chr8_2 mRNA 50008050 50011586 50008050 ID=Msa1252850-mRNA-1;Parent=Msa1252850;Name=Msa1252850-mRNA-1;_AED=0.11;_eAED=0.11;_QI=129|1|1|1|0.75|0.6|5|213|148
chr8_2 exon 50008050 50008166 50008050 ID=Msa1252850-mRNA-1:exon:15215;Parent=Msa1252850-mRNA-1
chr8_2 exon 50008294 50008375 50008294 ID=Msa1252850-mRNA-1:exon:15216;Parent=Msa1252850-mRNA-1
chr8_2 exon 50009542 50009669 50009542 ID=Msa1252850-mRNA-1:exon:15217;Parent=Msa1252850-mRNA-1
chr8_2 exon 50010723 50010827 50010723 ID=Msa1252850-mRNA-1:exon:15218;Parent=Msa1252850-mRNA-1
chr8_2 exon 50011230 50011586 50011230 ID=Msa1252850-mRNA-1:exon:15219;Parent=Msa1252850-mRNA-1
chr8_2 five_prime_UTR 50008050 50008166 50008050 ID=Msa1252850-mRNA-1:five_prime_utr;Parent=Msa1252850-mRNA-1
chr8_2 five_prime_UTR 50008294 50008305 50008294 ID=Msa1252850-mRNA-1:five_prime_utr;Parent=Msa1252850-mRNA-1
chr8_2 CDS 50008306 50008375 50008306 ID=Msa1252850-mRNA-1:cds;Parent=Msa1252850-mRNA-1
chr8_2 CDS 50009542 50009669 50009542 ID=Msa1252850-mRNA-1:cds;Parent=Msa1252850-mRNA-1
chr8_2 CDS 50010723 50010827 50010723 ID=Msa1252850-mRNA-1:cds;Parent=Msa1252850-mRNA-1
chr8_2 CDS 50011230 50011373 50011230 ID=Msa1252850-mRNA-1:cds;Parent=Msa1252850-mRNA-1
chr8_2 three_prime_UTR 50011374 50011586 50011374 ID=Msa1252850-mRNA-1:three_prime_utr;Parent=Msa1252850-mRNA-1
Gene Sequence

>Msa1252850

ATGGCCTCAAAGCGGATCAATAAGGAATTGAAGGACTTGCAGAAGGATCCTCCTGCCTCTTGCAGTGCTGGCCCTGTCGCTGATGATATGTTCCATTGGCAAGCTACAATTATGGGCCCAGGAGATAGCCCATTTGCGGGAGGTGTGTTTCTTGTGCAAATTCACTTCCCTCCGGATTATCCTTTCAAACCACCCAAGGTTTCATTCCGCACAAAGGTTTTCCACCCTAATATCAACAGTAACGGTAGCATTTGCCTTGACATCCTGAAAGAGCAATGGAGCCCTGCCCTCACAATATCCAAGGTGCTACTGTCCATTTGTTCTCTGTTGACTGATCCCAACCCAGATGATCCTCTGGTCCCTGAAATTGCTCATATGTACAAGAGTGACAAAGCTAAGTATGAGGCCACTGCTCGGTCATGGACCCAGAAATATGCCATGGGTTAA
Protein sequence

>Msa1252850

MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPGDSPFAGGVFLVQIHFPPDYPFKPPKVSFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG*