AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0031820


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0031820 MtrunA17_Chr1g0190001 99.571 699 3 0 1 699 1 699 0.0 1434
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0031820 AT1G71270.1 83.236 686 114 1 14 699 23 707 0.0 1198
Msa0031820 AT1G71300.2 77.681 690 147 2 16 699 13 701 0.0 1122
Msa0031820 AT1G71300.1 73.370 736 143 5 16 699 13 747 0.0 1103

Find 150 sgRNAs with CRISPR-Local

Find 606 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGACACTTTGTTGAAGTATT+TGG 0.142382 1_1:-58634930 None:intergenic
AAAACATACATTGGATATTA+TGG 0.143109 1_1:-58641245 None:intergenic
AAACTCACTTGTACTTTAAA+AGG 0.194550 1_1:-58634951 None:intergenic
GCAACATCCTATGATTTAAT+TGG 0.226169 1_1:+58636323 Msa0031820:CDS
AAGTATTTGGATATTTGTTT+TGG 0.230134 1_1:-58634917 None:intergenic
ATTCCAGCAACTAAGATCTT+AGG 0.236093 1_1:+58641510 Msa0031820:three_prime_UTR
TACATTGGATATTATGGATT+TGG 0.243421 1_1:-58641239 None:intergenic
AGAAACACCGTTTGTAGTTT+TGG 0.244653 1_1:-58639863 None:intergenic
AACTCTGCTAAGTGGATTTC+AGG 0.248051 1_1:+58632866 Msa0031820:CDS
ATCCACTTAAACTCTGAGTT+TGG 0.250844 1_1:+58639678 Msa0031820:CDS
TATTATCACAATCATGAATT+TGG 0.261483 1_1:-58632827 None:intergenic
GCCATTGACGTGATGAGATT+TGG 0.261744 1_1:-58631351 None:intergenic
CTCATACATGATTGAAGATA+TGG 0.264600 1_1:-58641151 None:intergenic
GCAAGAGAAGTCTATGGATA+TGG 0.265601 1_1:+58633368 Msa0031820:CDS
CACAATTTAATAAATTGATT+TGG 0.280183 1_1:+58641576 Msa0031820:three_prime_UTR
GCAACAGTTATAGGTTTATC+AGG 0.284406 1_1:-58640916 None:intergenic
TCCACTTCCGCAACAGTTAT+AGG 0.293677 1_1:-58640925 None:intergenic
TTAGTATAATCTCTAAGTTT+TGG 0.301178 1_1:-58632527 None:intergenic
TCCACTTAAACTCTGAGTTT+GGG 0.308316 1_1:+58639679 Msa0031820:CDS
AGTGGAGTTGGATTCAATTC+AGG 0.310032 1_1:+58632574 Msa0031820:CDS
TTGGTTTATACAGGTCCTTT+TGG 0.364770 1_1:+58637988 Msa0031820:intron
GAGCTTGCAGAAGCTGCTTA+TGG 0.365008 1_1:+58637158 Msa0031820:CDS
CCATTGACGTGATGAGATTT+GGG 0.371241 1_1:-58631350 None:intergenic
CCTTCTAGTGCATTTGATCT+AGG 0.372542 1_1:+58631635 Msa0031820:CDS
GCTGGAATGCCATGCTCAAC+AGG 0.375148 1_1:-58641495 None:intergenic
ATTGCAGCTTGAACTGAATC+TGG 0.380544 1_1:+58639781 Msa0031820:intron
TTAAATCATTAAAATGCTCT+TGG 0.392587 1_1:-58640733 None:intergenic
TGATAATATCTTGTCACATA+TGG 0.393000 1_1:+58632842 Msa0031820:CDS
CTCTGAGTTTGGGGATGGTC+AGG 0.393038 1_1:+58639689 Msa0031820:CDS
ACCTATAACTGTTGCGGAAG+TGG 0.396596 1_1:+58640924 Msa0031820:CDS
CTTCAATCATGTATGAGATT+AGG 0.397107 1_1:+58641157 Msa0031820:CDS
TCGGAGGCGGATTCCATGCT+TGG 0.397429 1_1:+58638529 Msa0031820:CDS
TTTAATAAATTGATTTGGAT+TGG 0.397531 1_1:+58641581 Msa0031820:three_prime_UTR
CCCACCAGGGATCCTCTTGA+TGG 0.398438 1_1:-58641103 None:intergenic
ATTTCAGGAAATTGATGAAC+CGG 0.399043 1_1:+58637074 Msa0031820:intron
ATCCCTAAGATCTTAGTTGC+TGG 0.401540 1_1:-58641513 None:intergenic
ATCCATATGAAGTTCTGTTC+AGG 0.405654 1_1:+58637136 Msa0031820:CDS
TTTATTTACCAGGCTGAGAT+TGG 0.409163 1_1:+58633318 Msa0031820:intron
AATTCTGCAAGAGAAGTCTA+TGG 0.414810 1_1:+58633362 Msa0031820:CDS
TACATCTATAGTTACCGAAT+TGG 0.416199 1_1:+58641316 Msa0031820:three_prime_UTR
TCGTATAGTAAAGTAGCAAT+TGG 0.417834 1_1:-58641068 None:intergenic
ATCGTTAGATGGACTTCAAC+AGG 0.417942 1_1:+58631824 Msa0031820:CDS
CCTATAGCATCATAGCAGTT+TGG 0.418595 1_1:-58638042 None:intergenic
CTCCTGAACAGAACTTCATA+TGG 0.421045 1_1:-58637138 None:intergenic
CTCTACACCAATTAAATCAT+AGG 0.428333 1_1:-58636330 None:intergenic
TTCCACAAACTTAGCCAGCT+TGG 0.428764 1_1:-58633727 None:intergenic
AATTATACAGAATGCAAATA+CGG 0.434615 1_1:+58641406 Msa0031820:three_prime_UTR
ACCATTGAAGAAGATCTAAA+CGG 0.434766 1_1:+58631677 Msa0031820:CDS
CCCCAAACTCAGAGTTTAAG+TGG 0.436616 1_1:-58639680 None:intergenic
CCCGTTTAGATCTTCTTCAA+TGG 0.437299 1_1:-58631678 None:intergenic
CAAAATTCAAATGCACTTTG+AGG 0.439404 1_1:+58640145 Msa0031820:CDS
ATTCTTCAACAATGCCAATT+CGG 0.448022 1_1:-58641330 None:intergenic
GAAACTGAAGTTTGTAGAAG+TGG 0.448325 1_1:+58634635 Msa0031820:CDS
CCTAGATCAAATGCACTAGA+AGG 0.458119 1_1:-58631635 None:intergenic
CCAAACTGCTATGATGCTAT+AGG 0.459765 1_1:+58638042 Msa0031820:CDS
TGATTTGCGCAAAGTGGAGT+TGG 0.463004 1_1:+58632562 Msa0031820:CDS
CAAATCAATTTATTAAATTG+TGG 0.466205 1_1:-58641575 None:intergenic
TCAATATTTCCCTATGGCCT+CGG 0.467395 1_1:+58639532 Msa0031820:CDS
TGCTCATCCATGACACCAAA+AGG 0.473405 1_1:-58638003 None:intergenic
ATATGGATATTTAATAGAGC+TGG 0.474130 1_1:-58637121 None:intergenic
GGCAGGTCAATATTTCCCTA+TGG 0.475047 1_1:+58639526 Msa0031820:intron
GTTTATCAGGACTCGATGTT+GGG 0.475291 1_1:-58640903 None:intergenic
CCGTGCTTACATACAAGCAT+TGG 0.475768 1_1:+58636280 Msa0031820:CDS
GGTTTATCAGGACTCGATGT+TGG 0.478071 1_1:-58640904 None:intergenic
TTCCAGCAACTAAGATCTTA+GGG 0.478658 1_1:+58641511 Msa0031820:three_prime_UTR
ATCCAAGCTGGCTAAGTTTG+TGG 0.479760 1_1:+58633725 Msa0031820:CDS
CATTATTATCCCTCCGAGAA+TGG 0.482423 1_1:+58633752 Msa0031820:CDS
CCTATGGCCTCGGTTTAAGA+TGG 0.482544 1_1:+58639542 Msa0031820:CDS
TATATGTACCATTGTGTTTG+AGG 0.486517 1_1:-58631510 None:intergenic
TTGCATTCTGTATAATTCCA+TGG 0.489937 1_1:-58641400 None:intergenic
GAGCAATACAGCATTATTTG+TGG 0.490021 1_1:+58640178 Msa0031820:CDS
AACCTGAGCTTGAAAAGCTC+AGG 0.490108 1_1:+58634697 Msa0031820:CDS
CCCAAATCTCATCACGTCAA+TGG 0.498059 1_1:+58631350 Msa0031820:five_prime_UTR
CCATTGAAGAAGATCTAAAC+GGG 0.498176 1_1:+58631678 Msa0031820:CDS
ATGGTGGACATCCTTGTTGA+TGG 0.498798 1_1:+58633771 Msa0031820:CDS
AGTGATGATATATCGTTAGA+TGG 0.498874 1_1:+58631813 Msa0031820:intron
ACAAGGATGTCCACCATTCT+CGG 0.499451 1_1:-58633765 None:intergenic
AGCTCATTATGTCTCGGAGG+CGG 0.500639 1_1:+58638516 Msa0031820:intron
TCGCATAATACACCAGCATC+AGG 0.502459 1_1:+58638080 Msa0031820:CDS
CACAAAGCCAAAACTACAAA+CGG 0.504050 1_1:+58639856 Msa0031820:CDS
CAGGAAGCAGGTCCTGAAGC+TGG 0.508420 1_1:+58640122 Msa0031820:intron
CTTGATAAGTAAATCATCAA+TGG 0.510022 1_1:-58639819 None:intergenic
CAAGAGAAGTCTATGGATAT+GGG 0.510930 1_1:+58633369 Msa0031820:CDS
AAGAAGTCAGAGTTATCTGT+TGG 0.512355 1_1:+58641208 Msa0031820:three_prime_UTR
AGTCTATGGATATGGGTTTG+AGG 0.513380 1_1:+58633376 Msa0031820:CDS
ACAGCAGATCGATTCTTTAG+CGG 0.514662 1_1:-58636392 None:intergenic
GGATAGGATTAATATATTGA+AGG 0.519305 1_1:+58636427 Msa0031820:CDS
AAAACTTAGAGATTATACTA+AGG 0.519810 1_1:+58632529 Msa0031820:CDS
GAATCTGGAACGACTTAGAA+TGG 0.521290 1_1:+58639796 Msa0031820:CDS
GATTCCATCAAGAGGATCCC+TGG 0.522126 1_1:+58641099 Msa0031820:CDS
TGCAACAAATATCAAGTCCA+TGG 0.523909 1_1:+58641383 Msa0031820:three_prime_UTR
GTTGCAAATATACTATCTAA+AGG 0.530234 1_1:+58632503 Msa0031820:CDS
CATCTTAAACCGAGGCCATA+GGG 0.530347 1_1:-58639541 None:intergenic
TTGTTCAATGCAGACCCACC+AGG 0.531672 1_1:-58641117 None:intergenic
CGTATAGTAAAGTAGCAATT+GGG 0.531794 1_1:-58641067 None:intergenic
TATTTCAGCTCATTATGTCT+CGG 0.532355 1_1:+58638510 Msa0031820:intron
GAGCTGGCTTCAGCTATATG+AGG 0.536113 1_1:-58637105 None:intergenic
CCACTTAAACTCTGAGTTTG+GGG 0.538247 1_1:+58639680 Msa0031820:CDS
CCATCTTAAACCGAGGCCAT+AGG 0.544335 1_1:-58639542 None:intergenic
CAGGCAGAAAGCAGTCTCAA+AGG 0.545719 1_1:+58634716 Msa0031820:CDS
CATGCTTGATTCCAGGAAGC+AGG 0.549332 1_1:+58640110 Msa0031820:intron
GACTCTCTGATTCCATCAAG+AGG 0.549335 1_1:+58641091 Msa0031820:CDS
ATTATACAGAATGCAAATAC+GGG 0.550875 1_1:+58641407 Msa0031820:three_prime_UTR
AAACTTAGAGATTATACTAA+GGG 0.553199 1_1:+58632530 Msa0031820:CDS
GAATTGGCATTGTTGAAGAA+TGG 0.553471 1_1:+58641332 Msa0031820:three_prime_UTR
TGAGAATGATTTGCGCAAAG+TGG 0.554547 1_1:+58632556 Msa0031820:CDS
TTGCATTTCGCAAACTGTTG+AGG 0.557428 1_1:-58639578 None:intergenic
CTTGGATTCTTATTTAGACA+AGG 0.558627 1_1:+58638547 Msa0031820:CDS
GGAAGTGGAGCCACTGGTGA+AGG 0.561875 1_1:+58640939 Msa0031820:CDS
TAACGCCTCATGACATAATG+AGG 0.563593 1_1:-58639633 None:intergenic
GTATGTTGTTAACTTTCTCA+AGG 0.565046 1_1:+58635512 Msa0031820:CDS
GTTAACTTTCTCAAGGAACA+TGG 0.568981 1_1:+58635519 Msa0031820:CDS
TCTAAATAAGAATCCAAGCA+TGG 0.575363 1_1:-58638542 None:intergenic
TTAAACTCTGAGTTTGGGGA+TGG 0.578938 1_1:+58639684 Msa0031820:CDS
CCAATGCTTGTATGTAAGCA+CGG 0.580622 1_1:-58636280 None:intergenic
TGATTTAATCAAGTTTGTCA+AGG 0.581810 1_1:+58640748 Msa0031820:CDS
TGGTGGGTCTGCATTGAACA+AGG 0.583690 1_1:+58641119 Msa0031820:CDS
GTCAGAATGTTACCTGATGC+TGG 0.583853 1_1:-58638092 None:intergenic
TGATAAACCTATAACTGTTG+CGG 0.590582 1_1:+58640918 Msa0031820:CDS
CATATGGAAACTCTGCTAAG+TGG 0.592668 1_1:+58632858 Msa0031820:CDS
CAATTTCTACACAAACAAGA+TGG 0.602918 1_1:+58631478 Msa0031820:exon
GCTATATGAGGAATCAATGC+CGG 0.605953 1_1:-58637093 None:intergenic
ATAGGTGGCTGAATCCAAGC+TGG 0.607893 1_1:+58633713 Msa0031820:intron
TTCATCCTCATTATGTCATG+AGG 0.609555 1_1:+58639628 Msa0031820:CDS
TGTTGCGGAAGTGGAGCCAC+TGG 0.613209 1_1:+58640933 Msa0031820:CDS
ATGCAAATGTGAAGACATTG+TGG 0.614201 1_1:+58639595 Msa0031820:CDS
TGGACTTCAACAGGAGCTTG+AGG 0.615166 1_1:+58631833 Msa0031820:CDS
ATGAGATTTGGGAGACACGT+CGG 0.618823 1_1:-58631339 None:intergenic
TTTGATCTAGGAGCATTCGT+TGG 0.622940 1_1:+58631647 Msa0031820:CDS
TATTATCCCTCCGAGAATGG+TGG 0.631865 1_1:+58633755 Msa0031820:CDS
TGCAAATGTGAAGACATTGT+GGG 0.634645 1_1:+58639596 Msa0031820:CDS
TCGAATACCATCTTAAACCG+AGG 0.634683 1_1:-58639549 None:intergenic
GTTTGTAGAAGTGGACACAA+TGG 0.634918 1_1:+58634644 Msa0031820:CDS
TTATGTCATGAGGCGTTATG+CGG 0.635931 1_1:+58639638 Msa0031820:CDS
GGATGTCCACCATTCTCGGA+GGG 0.636579 1_1:-58633761 None:intergenic
TTTGAGGCTTAAGAATCGCA+AGG 0.639267 1_1:+58633392 Msa0031820:CDS
TTCAGCTCATTATGTCTCGG+AGG 0.639985 1_1:+58638513 Msa0031820:intron
CCATCAAGAGGATCCCTGGT+GGG 0.646372 1_1:+58641103 Msa0031820:CDS
ATGAGATTAGGAAATATTCG+AGG 0.647688 1_1:+58641169 Msa0031820:CDS
GGACATCCTTGTTGATGGAG+AGG 0.650934 1_1:+58633776 Msa0031820:CDS
AGATCAATCAAAGAGTGTTG+CGG 0.659234 1_1:-58631382 None:intergenic
TCCATCAAGAGGATCCCTGG+TGG 0.661975 1_1:+58641102 Msa0031820:CDS
CTTGCAAAATCCTTCACCAG+TGG 0.665825 1_1:-58640949 None:intergenic
TTATATTGATACAATGAACA+AGG 0.679968 1_1:+58635572 Msa0031820:CDS
TGTTCAATGCAGACCCACCA+GGG 0.681342 1_1:-58641116 None:intergenic
ATAATACCTCTCCATCAACA+AGG 0.682669 1_1:-58633782 None:intergenic
TGATGTCGCCTCAAACACAA+TGG 0.699806 1_1:+58631502 Msa0031820:CDS
AGGATGTCCACCATTCTCGG+AGG 0.702552 1_1:-58633762 None:intergenic
CTGCAGATATAATTTCTGTG+AGG 0.705047 1_1:+58637295 Msa0031820:intron
GTAGAGACAAGAAGCAACAG+CGG 0.747225 1_1:+58636347 Msa0031820:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGTTTTATATCAATATTTT+TGG + chr1_1:58631958-58631977 Msa0031820:intron 10.0%
!!! AAATTTTAATTTTATTTACC+AGG + chr1_1:58633308-58633327 Msa0031820:intron 10.0%
!! AGAAATTAATAAAACATTAT+TGG - chr1_1:58633837-58633856 None:intergenic 10.0%
!!! ATATATATTTTCTAATACTT+TGG + chr1_1:58634102-58634121 Msa0031820:intron 10.0%
!! TTGATCAATAAAAATATTAA+TGG - chr1_1:58635621-58635640 None:intergenic 10.0%
!! TGTTATATTATTCAATTATT+TGG - chr1_1:58638336-58638355 None:intergenic 10.0%
!!! TGTAAAAAAAAAAACATTTT+TGG + chr1_1:58641267-58641286 Msa0031820:three_prime_UTR 10.0%
!!! TTGTAATGTAATTTTTAATT+TGG + chr1_1:58641447-58641466 Msa0031820:three_prime_UTR 10.0%
!!! TGTAATGTAATTTTTAATTT+GGG + chr1_1:58641448-58641467 Msa0031820:three_prime_UTR 10.0%
!! AACTAAAACATATTGTAATT+TGG - chr1_1:58631733-58631752 None:intergenic 15.0%
!!! TTTTTTTATATTCTTCTGAT+TGG + chr1_1:58632310-58632329 Msa0031820:intron 15.0%
!!! TAATGAAAGTATTTTACATT+TGG + chr1_1:58633040-58633059 Msa0031820:intron 15.0%
!! GTTCATTAATATTTCTTTAA+TGG + chr1_1:58633557-58633576 Msa0031820:intron 15.0%
!! ATTAATATTTCTTTAATGGT+TGG + chr1_1:58633561-58633580 Msa0031820:intron 15.0%
!!! GTTTTATTAATTTCTTTTTG+TGG + chr1_1:58633842-58633861 Msa0031820:intron 15.0%
!!! AAAAATTGATAATTGTAACA+TGG - chr1_1:58636124-58636143 None:intergenic 15.0%
!! ATATCTATATGTCTAAATAT+TGG - chr1_1:58636157-58636176 None:intergenic 15.0%
!! AGATAGTATTATAAAACAAA+AGG - chr1_1:58636495-58636514 None:intergenic 15.0%
!!! AAATAAAAAGTATATAGCAA+AGG - chr1_1:58636748-58636767 None:intergenic 15.0%
!! GTTAAAAGTTTAAATTATAG+AGG + chr1_1:58636799-58636818 Msa0031820:intron 15.0%
!! AAAGAAATTCTTTAATCTAT+TGG - chr1_1:58637411-58637430 None:intergenic 15.0%
!! GCATTTAATATAATCAATAA+TGG + chr1_1:58637622-58637641 Msa0031820:intron 15.0%
!!! ATTTTCAGCAATTTTTTATT+GGG + chr1_1:58637661-58637680 Msa0031820:intron 15.0%
!!! AACTTTTTAAATAAATGCAT+TGG + chr1_1:58637782-58637801 Msa0031820:intron 15.0%
!!! AAAGGTACAAAAATAAAAAA+GGG - chr1_1:58637871-58637890 None:intergenic 15.0%
!!! AAAAGGTACAAAAATAAAAA+AGG - chr1_1:58637872-58637891 None:intergenic 15.0%
!!! TTTTTATTTTTGTACCTTTT+TGG + chr1_1:58637872-58637891 Msa0031820:intron 15.0%
!! AATAAAATATATTAGACCAA+GGG - chr1_1:58639417-58639436 None:intergenic 15.0%
!! AAATAAAATATATTAGACCA+AGG - chr1_1:58639418-58639437 None:intergenic 15.0%
!!! TTTTTTTACAAAACATACAT+TGG - chr1_1:58641257-58641276 None:intergenic 15.0%
!! CAAATCAATTTATTAAATTG+TGG - chr1_1:58641578-58641597 None:intergenic 15.0%
!! CACAATTTAATAAATTGATT+TGG + chr1_1:58641576-58641595 Msa0031820:three_prime_UTR 15.0%
!!! TTTAATAAATTGATTTGGAT+TGG + chr1_1:58641581-58641600 Msa0031820:three_prime_UTR 15.0%
!! TCTATTAACTACAACTAATA+AGG - chr1_1:58632093-58632112 None:intergenic 20.0%
!!! AATGAATAAGAGTATATTAG+TGG + chr1_1:58632135-58632154 Msa0031820:intron 20.0%
!! ACAAATAATCAATGTTTCAT+TGG + chr1_1:58632160-58632179 Msa0031820:intron 20.0%
!!! GAATTATTTTGAGTGTTTAT+AGG - chr1_1:58632241-58632260 None:intergenic 20.0%
!! ACTCAAAATAATTCTTCAAT+TGG + chr1_1:58632247-58632266 Msa0031820:intron 20.0%
!! ATGCTTAAAGTGAAATTAAT+TGG - chr1_1:58632284-58632303 None:intergenic 20.0%
!!! TTAGTATAATCTCTAAGTTT+TGG - chr1_1:58632530-58632549 None:intergenic 20.0%
!! AAAACTTAGAGATTATACTA+AGG + chr1_1:58632529-58632548 Msa0031820:CDS 20.0%
!! AAACTTAGAGATTATACTAA+GGG + chr1_1:58632530-58632549 Msa0031820:CDS 20.0%
!! TAATATAATCCTGCAATAAA+TGG - chr1_1:58632776-58632795 None:intergenic 20.0%
!! TATTATCACAATCATGAATT+TGG - chr1_1:58632830-58632849 None:intergenic 20.0%
!!! TCAATACTATCCTTTAAAAA+TGG + chr1_1:58632980-58632999 Msa0031820:intron 20.0%
!!! AATTTTAATGTCTGAACTTA+TGG - chr1_1:58633346-58633365 None:intergenic 20.0%
!! CTTAGATCGTTTATATAAAA+TGG - chr1_1:58633423-58633442 None:intergenic 20.0%
!! TATGTAGTATGTAGTATAAT+TGG + chr1_1:58633672-58633691 Msa0031820:intron 20.0%
!! TTAATAAAACATTATTGGAG+AGG - chr1_1:58633832-58633851 None:intergenic 20.0%
!!! TCATTTATTATCTAAGATCA+TGG + chr1_1:58634222-58634241 Msa0031820:intron 20.0%
!!! CAGAAATTTTCTTTTATTCT+GGG + chr1_1:58634796-58634815 Msa0031820:intron 20.0%
!!! AGTATTTGGATATTTGTTTT+GGG - chr1_1:58634919-58634938 None:intergenic 20.0%
!!! AAGTATTTGGATATTTGTTT+TGG - chr1_1:58634920-58634939 None:intergenic 20.0%
!! TAGATAAAATTGTACATTCA+AGG - chr1_1:58635233-58635252 None:intergenic 20.0%
!!! AAAACGTTTTCACAATTTAA+AGG - chr1_1:58635432-58635451 None:intergenic 20.0%
!!! TTTCGTTATTTTTGTAACTT+TGG + chr1_1:58635449-58635468 Msa0031820:intron 20.0%
!!! TTCGTTATTTTTGTAACTTT+GGG + chr1_1:58635450-58635469 Msa0031820:intron 20.0%
!!! AAATAGAAATGTAAAAGTGT+AGG + chr1_1:58635490-58635509 Msa0031820:intron 20.0%
!! TTATATTGATACAATGAACA+AGG + chr1_1:58635572-58635591 Msa0031820:CDS 20.0%
!! ATATAGATATTGAGTGAAAT+GGG + chr1_1:58636167-58636186 Msa0031820:intron 20.0%
!! TACTTTGAATTATTTGCTTT+AGG + chr1_1:58636698-58636717 Msa0031820:intron 20.0%
!!! TTTGTGAAAGTTATATTTTG+TGG + chr1_1:58636765-58636784 Msa0031820:intron 20.0%
!!! TTAAACTTTTAACAATACCA+AGG - chr1_1:58636792-58636811 None:intergenic 20.0%
!! AATTATAAACGATGATTGAT+AGG + chr1_1:58636833-58636852 Msa0031820:intron 20.0%
!!! GTATAAATTTTGATTGAGTT+TGG - chr1_1:58636985-58637004 None:intergenic 20.0%
!! TGAAATAATGTCAAATCTTA+AGG - chr1_1:58637060-58637079 None:intergenic 20.0%
!! TTAAGATTTGACATTATTTC+AGG + chr1_1:58637059-58637078 Msa0031820:intron 20.0%
!!! ATGTTCTATGAAATTTTTTC+AGG + chr1_1:58637338-58637357 Msa0031820:CDS 20.0%
!! AAAATGAACTTTGTTAGATT+CGG + chr1_1:58637446-58637465 Msa0031820:intron 20.0%
!! TAATATAATCAATAATGGCA+TGG + chr1_1:58637627-58637646 Msa0031820:intron 20.0%
!! CAATAAAAAATTGCTGAAAA+TGG - chr1_1:58637662-58637681 None:intergenic 20.0%
!!! CATTTTCAGCAATTTTTTAT+TGG + chr1_1:58637660-58637679 Msa0031820:intron 20.0%
!! TGTTTGTTTATATACCAAAA+AGG - chr1_1:58637889-58637908 None:intergenic 20.0%
!!! AAGTTTTTCATTTTCAGATA+TGG + chr1_1:58637930-58637949 Msa0031820:intron 20.0%
!!! AGTTTTTCATTTTCAGATAT+GGG + chr1_1:58637931-58637950 Msa0031820:intron 20.0%
!! AGTTATAACATTGAAATTTC+TGG + chr1_1:58638722-58638741 Msa0031820:intron 20.0%
!! GTTATAACATTGAAATTTCT+GGG + chr1_1:58638723-58638742 Msa0031820:intron 20.0%
!! TTATAACATTGAAATTTCTG+GGG + chr1_1:58638724-58638743 Msa0031820:intron 20.0%
!! TTAAAGCTAATTCATAACTT+TGG + chr1_1:58639505-58639524 Msa0031820:intron 20.0%
!! TGCATTAGAAATTTACAAAA+AGG - chr1_1:58639745-58639764 None:intergenic 20.0%
!! AAATTAAAGTTCGTGTTTAA+TGG + chr1_1:58640238-58640257 Msa0031820:intron 20.0%
!!! TGTAATTTTCAAAAAGAAGA+TGG + chr1_1:58640588-58640607 Msa0031820:intron 20.0%
!!! GTAATTTTCAAAAAGAAGAT+GGG + chr1_1:58640589-58640608 Msa0031820:intron 20.0%
!! TTAAATCATTAAAATGCTCT+TGG - chr1_1:58640736-58640755 None:intergenic 20.0%
!!! TCGTTTTTTTTTTTAACAAG+TGG - chr1_1:58640803-58640822 None:intergenic 20.0%
!!! ATTCAATATTTGCTAAACTA+TGG + chr1_1:58640849-58640868 Msa0031820:intron 20.0%
!!! TTCAATATTTGCTAAACTAT+GGG + chr1_1:58640850-58640869 Msa0031820:intron 20.0%
!! AAAACATACATTGGATATTA+TGG - chr1_1:58641248-58641267 None:intergenic 20.0%
!! AATTATACAGAATGCAAATA+CGG + chr1_1:58641406-58641425 Msa0031820:three_prime_UTR 20.0%
!!! ATTAGTTGTGTTGATTTCAA+CGG + chr1_1:58632040-58632059 Msa0031820:intron 25.0%
! CAAAATAATTCTTCAATTGG+AGG + chr1_1:58632250-58632269 Msa0031820:intron 25.0%
!! TAGCTAGAAGTATAATTGAA+AGG - chr1_1:58632431-58632450 None:intergenic 25.0%
! CTTAATAACTTACATATGTG+TGG - chr1_1:58632462-58632481 None:intergenic 25.0%
! GTTGCAAATATACTATCTAA+AGG + chr1_1:58632503-58632522 Msa0031820:CDS 25.0%
! TGATAATATCTTGTCACATA+TGG + chr1_1:58632842-58632861 Msa0031820:CDS 25.0%
!! ATACTATCCTTTAAAAATGG+TGG + chr1_1:58632983-58633002 Msa0031820:intron 25.0%
!!! ACATTTACCACCATTTTTAA+AGG - chr1_1:58632993-58633012 None:intergenic 25.0%
!! AAATGTGTTTTCCTGATTTT+CGG + chr1_1:58633007-58633026 Msa0031820:intron 25.0%
!!! AAAGTATTTTACATTTGGAG+TGG + chr1_1:58633045-58633064 Msa0031820:intron 25.0%
! TTGTTTATTCGATCATTTGA+AGG + chr1_1:58633229-58633248 Msa0031820:intron 25.0%
! TCAATTAATATTACGCCAAA+AGG - chr1_1:58633473-58633492 None:intergenic 25.0%
!! AATTGATTATCAGTTTGTTC+TGG + chr1_1:58633487-58633506 Msa0031820:intron 25.0%
!!! TCTTGTTTTTTTCTCTCAAT+AGG + chr1_1:58633695-58633714 Msa0031820:intron 25.0%
!!! TCTCTTGTTTGATTTTGTTT+AGG + chr1_1:58634337-58634356 Msa0031820:intron 25.0%
! AGAAAGAAATCTAACTAGAA+GGG - chr1_1:58634555-58634574 None:intergenic 25.0%
! CATCAATAACAGTATTAGTA+TGG + chr1_1:58634746-58634765 Msa0031820:intron 25.0%
!! GCAGAAATTTTCTTTTATTC+TGG + chr1_1:58634795-58634814 Msa0031820:intron 25.0%
! AAACTCACTTGTACTTTAAA+AGG - chr1_1:58634954-58634973 None:intergenic 25.0%
! ATTCTGAATTCCTATTGATA+AGG + chr1_1:58635023-58635042 Msa0031820:intron 25.0%
! TAGATAAAACTAATTGCTAG+AGG - chr1_1:58635051-58635070 None:intergenic 25.0%
! TGTTATTGAACTACTATTGA+AGG + chr1_1:58635298-58635317 Msa0031820:intron 25.0%
! TTATCCTAAATAATGCTATG+AGG + chr1_1:58635645-58635664 Msa0031820:intron 25.0%
!!! TTTTTTGAAAACAACTTTGC+TGG - chr1_1:58635769-58635788 None:intergenic 25.0%
! TATGTATTCAATCAAAGTGT+AGG + chr1_1:58635872-58635891 Msa0031820:intron 25.0%
!!! TGGTAGCATTTTAAAATCTT+TGG + chr1_1:58635964-58635983 Msa0031820:intron 25.0%
!!! TTCATTCTATGTTAATTTGC+TGG + chr1_1:58636012-58636031 Msa0031820:intron 25.0%
! CATATAGATATTGAGTGAAA+TGG + chr1_1:58636166-58636185 Msa0031820:intron 25.0%
! GGATAGGATTAATATATTGA+AGG + chr1_1:58636427-58636446 Msa0031820:CDS 25.0%
! ATATGGATATTTAATAGAGC+TGG - chr1_1:58637124-58637143 None:intergenic 25.0%
! TGTCAACATGTATTTAACTA+GGG - chr1_1:58637261-58637280 None:intergenic 25.0%
! ATGTCAACATGTATTTAACT+AGG - chr1_1:58637262-58637281 None:intergenic 25.0%
!! AATTTCTGTGAGGATTTTTA+TGG + chr1_1:58637305-58637324 Msa0031820:CDS 25.0%
!! ATTTCTGTGAGGATTTTTAT+GGG + chr1_1:58637306-58637325 Msa0031820:CDS 25.0%
!!! AATTTTTTCAGGTATTGTGA+TGG + chr1_1:58637349-58637368 Msa0031820:intron 25.0%
!! GATGGAGTTTTTAAATTTTG+TGG + chr1_1:58637367-58637386 Msa0031820:intron 25.0%
! AAATTTAAACTATGCCAACA+TGG + chr1_1:58637496-58637515 Msa0031820:intron 25.0%
! AATTTAAACTATGCCAACAT+GGG + chr1_1:58637497-58637516 Msa0031820:intron 25.0%
! TTAAAGACAAAATGATACAG+TGG - chr1_1:58637912-58637931 None:intergenic 25.0%
!! TTTTCATTGGAATTTCAAGA+GGG - chr1_1:58638266-58638285 None:intergenic 25.0%
! TCAGTTTCAAATTGTTTGAA+AGG - chr1_1:58638480-58638499 None:intergenic 25.0%
!!! AAAATGAGGAGATATTTTTG+GGG - chr1_1:58639048-58639067 None:intergenic 25.0%
!! CAAAATGAGGAGATATTTTT+GGG - chr1_1:58639049-58639068 None:intergenic 25.0%
! AATGTTCTCATAAAAAGTTG+AGG - chr1_1:58639142-58639161 None:intergenic 25.0%
!! TCAACTTTTTATGAGAACAT+TGG + chr1_1:58639141-58639160 Msa0031820:intron 25.0%
! TTTCATCATTGAACAATAGA+AGG - chr1_1:58639458-58639477 None:intergenic 25.0%
! CTATTGTTCAATGATGAAAA+TGG + chr1_1:58639459-58639478 Msa0031820:intron 25.0%
! TAGAAATTTACAAAAAGGAG+TGG - chr1_1:58639740-58639759 None:intergenic 25.0%
! CTTGATAAGTAAATCATCAA+TGG - chr1_1:58639822-58639841 None:intergenic 25.0%
!!! TATCAATTTTGGAATATCCA+GGG + chr1_1:58640068-58640087 Msa0031820:intron 25.0%
!! TTAAGACTGAAACTCTTTTT+CGG + chr1_1:58640394-58640413 Msa0031820:intron 25.0%
! AGTTCTGTGTTAAATTAAGT+GGG + chr1_1:58640481-58640500 Msa0031820:intron 25.0%
! ATTTACTTGTTTCCTTTAGA+TGG - chr1_1:58640559-58640578 None:intergenic 25.0%
!! TGTATTCATTGATTATTTCG+TGG + chr1_1:58640616-58640635 Msa0031820:intron 25.0%
! TGATTTAATCAAGTTTGTCA+AGG + chr1_1:58640748-58640767 Msa0031820:CDS 25.0%
! TACATTGGATATTATGGATT+TGG - chr1_1:58641242-58641261 None:intergenic 25.0%
!!! TAAGATTTTTTTGCTCGTTT+TGG + chr1_1:58641292-58641311 Msa0031820:three_prime_UTR 25.0%
!!! AAGATTTTTTTGCTCGTTTT+GGG + chr1_1:58641293-58641312 Msa0031820:three_prime_UTR 25.0%
! ATTATACAGAATGCAAATAC+GGG + chr1_1:58641407-58641426 Msa0031820:three_prime_UTR 25.0%
! TTTGAAGAAGAAAAAGTGTG+AGG - chr1_1:58631409-58631428 None:intergenic 30.0%
CAATTTCTACACAAACAAGA+TGG + chr1_1:58631478-58631497 Msa0031820:exon 30.0%
TATATGTACCATTGTGTTTG+AGG - chr1_1:58631513-58631532 None:intergenic 30.0%
CAGTGTAACAGAAAACATTA+TGG - chr1_1:58631541-58631560 None:intergenic 30.0%
ACCATTGAAGAAGATCTAAA+CGG + chr1_1:58631677-58631696 Msa0031820:CDS 30.0%
AGTGATGATATATCGTTAGA+TGG + chr1_1:58631813-58631832 Msa0031820:intron 30.0%
GATCAACTATGCAATTTCAT+CGG - chr1_1:58631930-58631949 None:intergenic 30.0%
!!! TTTTTGGTTGTAGCTTTGTA+AGG + chr1_1:58631974-58631993 Msa0031820:intron 30.0%
TTCATTGGTATTAACCCATT+TGG + chr1_1:58632175-58632194 Msa0031820:intron 30.0%
TCATTGGTATTAACCCATTT+GGG + chr1_1:58632176-58632195 Msa0031820:intron 30.0%
TTCTTTATGTGCATAGTCAA+AGG + chr1_1:58632369-58632388 Msa0031820:intron 30.0%
! AGAAGTATAATTGAAAGGCA+GGG - chr1_1:58632426-58632445 None:intergenic 30.0%
! TAGAAGTATAATTGAAAGGC+AGG - chr1_1:58632427-58632446 None:intergenic 30.0%
CTAGCTAAGAAGAAACAAAA+TGG - chr1_1:58632635-58632654 None:intergenic 30.0%
!! AGTATTGACTAACTAAGAAC+TGG - chr1_1:58632968-58632987 None:intergenic 30.0%
AACAAAAATTGTCGAGATTG+TGG - chr1_1:58633073-58633092 None:intergenic 30.0%
ATATACTAACAGATCCTCAA+AGG - chr1_1:58633185-58633204 None:intergenic 30.0%
! TTCATAATTGTAGCACCTTT+TGG + chr1_1:58633455-58633474 Msa0031820:intron 30.0%
GGAAATCAAATTGCATCAAA+AGG + chr1_1:58633508-58633527 Msa0031820:intron 30.0%
TTCTATTCATGTTTGGATGA+GGG + chr1_1:58633586-58633605 Msa0031820:intron 30.0%
ACAGAAAAACTTAATTCGCT+GGG - chr1_1:58633633-58633652 None:intergenic 30.0%
ATACTACATATAACACATGC+AGG - chr1_1:58633662-58633681 None:intergenic 30.0%
!!! TGTTTTTTTCTCTCAATAGG+TGG + chr1_1:58633698-58633717 Msa0031820:intron 30.0%
AAACCTTATAAGTACTACCT+AGG - chr1_1:58633941-58633960 None:intergenic 30.0%
TAGGTAGTACTTATAAGGTT+TGG + chr1_1:58633940-58633959 Msa0031820:intron 30.0%
!! ACCTTATAAGTCAGTTTTGT+GGG + chr1_1:58633972-58633991 Msa0031820:intron 30.0%
TACCTTAAATTCAGGACTTA+AGG - chr1_1:58634008-58634027 None:intergenic 30.0%
GCAAACAATACCTTAAATTC+AGG - chr1_1:58634016-58634035 None:intergenic 30.0%
TCCTTAGAGAATCAACTAAA+AGG + chr1_1:58634273-58634292 Msa0031820:intron 30.0%
!! TCCTTTTAGTTGATTCTCTA+AGG - chr1_1:58634277-58634296 None:intergenic 30.0%
!!! ATTGACAGTTTTATTGTTGC+TGG + chr1_1:58634383-58634402 Msa0031820:intron 30.0%
GAGAAAGAAATCTAACTAGA+AGG - chr1_1:58634556-58634575 None:intergenic 30.0%
GTTAGATTTCTTTCTCACTT+TGG + chr1_1:58634560-58634579 Msa0031820:intron 30.0%
! TTTAGAATGCTATAGCTTGA+TGG + chr1_1:58634985-58635004 Msa0031820:intron 30.0%
!!! CTATTCATTGCTTTTTTGAC+TGG + chr1_1:58635166-58635185 Msa0031820:intron 30.0%
! ACGTTTTCACAATTTAAAGG+TGG - chr1_1:58635429-58635448 None:intergenic 30.0%
GTATGTTGTTAACTTTCTCA+AGG + chr1_1:58635512-58635531 Msa0031820:CDS 30.0%
!!! AAAACTAGCTTTTTGTCAAC+AGG - chr1_1:58635845-58635864 None:intergenic 30.0%
ACATAGAATGAAAGTAAGTC+AGG - chr1_1:58636004-58636023 None:intergenic 30.0%
! AATGGGTATAATGATTTTGC+AGG + chr1_1:58636184-58636203 Msa0031820:intron 30.0%
! ATGGGTATAATGATTTTGCA+GGG + chr1_1:58636185-58636204 Msa0031820:intron 30.0%
GCAACATCCTATGATTTAAT+TGG + chr1_1:58636323-58636342 Msa0031820:CDS 30.0%
CTCTACACCAATTAAATCAT+AGG - chr1_1:58636333-58636352 None:intergenic 30.0%
! ATAGTTTTTCCCTTTTTCCT+AGG - chr1_1:58636463-58636482 None:intergenic 30.0%
! AAGTTATATTTTGTGGTCCT+TGG + chr1_1:58636772-58636791 Msa0031820:intron 30.0%
!! TTCAACTGTTGATTCTTCAA+TGG + chr1_1:58636926-58636945 Msa0031820:intron 30.0%
ATTTCAGGAAATTGATGAAC+CGG + chr1_1:58637074-58637093 Msa0031820:intron 30.0%
AAATTATATCTGCAGATGCA+AGG - chr1_1:58637290-58637309 None:intergenic 30.0%
! TTTCTGTGAGGATTTTTATG+GGG + chr1_1:58637307-58637326 Msa0031820:CDS 30.0%
!!! TATGCCTTTTTGGTTTATAC+AGG + chr1_1:58637979-58637998 Msa0031820:intron 30.0%
AAACCACATTGATGTTATTG+CGG + chr1_1:58638164-58638183 Msa0031820:intron 30.0%
AATTCTTGGAACAAGATGAT+GGG - chr1_1:58638230-58638249 None:intergenic 30.0%
AAATTCTTGGAACAAGATGA+TGG - chr1_1:58638231-58638250 None:intergenic 30.0%
! GTTTTCATTGGAATTTCAAG+AGG - chr1_1:58638267-58638286 None:intergenic 30.0%
CTGAAACATAAAATGCAGAT+TGG - chr1_1:58638392-58638411 None:intergenic 30.0%
TATTTCAGCTCATTATGTCT+CGG + chr1_1:58638510-58638529 Msa0031820:intron 30.0%
TCTAAATAAGAATCCAAGCA+TGG - chr1_1:58638545-58638564 None:intergenic 30.0%
! CTTGGATTCTTATTTAGACA+AGG + chr1_1:58638547-58638566 Msa0031820:CDS 30.0%
ATAGTTAGAATCCTCAAGAT+TGG + chr1_1:58638868-58638887 Msa0031820:intron 30.0%
TAGTTAGAATCCTCAAGATT+GGG + chr1_1:58638869-58638888 Msa0031820:intron 30.0%
! CCAAAATGAGGAGATATTTT+TGG - chr1_1:58639050-58639069 None:intergenic 30.0%
! CCAAAAATATCTCCTCATTT+TGG + chr1_1:58639047-58639066 Msa0031820:intron 30.0%
! AGAATTTGATGACCAAAATG+AGG - chr1_1:58639062-58639081 None:intergenic 30.0%
! AAGTTGAGGTTAGTCATATT+GGG - chr1_1:58639128-58639147 None:intergenic 30.0%
! AAAGTTGAGGTTAGTCATAT+TGG - chr1_1:58639129-58639148 None:intergenic 30.0%
TATGACTTCTATAGGTAGAA+CGG - chr1_1:58639287-58639306 None:intergenic 30.0%
TAGTCATCTATGACTTCTAT+AGG - chr1_1:58639295-58639314 None:intergenic 30.0%
TATAGAAGTCATAGATGACT+AGG + chr1_1:58639294-58639313 Msa0031820:intron 30.0%
!! TTAGCTTTAAACATGACTCA+AGG - chr1_1:58639495-58639514 None:intergenic 30.0%
!! GTTTTGTTCAAGTACTTTCT+AGG - chr1_1:58639993-58640012 None:intergenic 30.0%
AAAACTCCATTTCAAATTGC+TGG + chr1_1:58640008-58640027 Msa0031820:intron 30.0%
!!! ATAGCTTGCTCTATCAATTT+TGG + chr1_1:58640057-58640076 Msa0031820:intron 30.0%
!!! CTATCAATTTTGGAATATCC+AGG + chr1_1:58640067-58640086 Msa0031820:intron 30.0%
CAAAATTCAAATGCACTTTG+AGG + chr1_1:58640145-58640164 Msa0031820:CDS 30.0%
!! CTTTAATTTGCAACAAAACC+AGG - chr1_1:58640227-58640246 None:intergenic 30.0%
!! TTGCTATTTCTTCACATTGT+TGG + chr1_1:58640297-58640316 Msa0031820:intron 30.0%
GAAACTAAATTTCGACTAAG+TGG - chr1_1:58640346-58640365 None:intergenic 30.0%
TAATTCATTTCCTTCAGATC+AGG - chr1_1:58640439-58640458 None:intergenic 30.0%
GAATTAGAAATAAGACTAGC+TGG + chr1_1:58640453-58640472 Msa0031820:intron 30.0%
GAGTTCTGTGTTAAATTAAG+TGG + chr1_1:58640480-58640499 Msa0031820:intron 30.0%
GTTCTGTGTTAAATTAAGTG+GGG + chr1_1:58640482-58640501 Msa0031820:intron 30.0%
TTCTGTGTTAAATTAAGTGG+GGG + chr1_1:58640483-58640502 Msa0031820:intron 30.0%
!! AATAGTTTGTTATCAGCAAG+TGG - chr1_1:58640522-58640541 None:intergenic 30.0%
! ATTTTTCTTTCAATCCTTGC+AGG + chr1_1:58640700-58640719 Msa0031820:intron 30.0%
ATGTAAATAAGATGCGACAT+TGG - chr1_1:58640831-58640850 None:intergenic 30.0%
TGATAAACCTATAACTGTTG+CGG + chr1_1:58640918-58640937 Msa0031820:CDS 30.0%
!!! TCTTTCAGCAATTTTTTGTG+CGG + chr1_1:58641018-58641037 Msa0031820:CDS 30.0%
CGTATAGTAAAGTAGCAATT+GGG - chr1_1:58641070-58641089 None:intergenic 30.0%
TCGTATAGTAAAGTAGCAAT+TGG - chr1_1:58641071-58641090 None:intergenic 30.0%
CTCATACATGATTGAAGATA+TGG - chr1_1:58641154-58641173 None:intergenic 30.0%
CTTCAATCATGTATGAGATT+AGG + chr1_1:58641157-58641176 Msa0031820:CDS 30.0%
ATGAGATTAGGAAATATTCG+AGG + chr1_1:58641169-58641188 Msa0031820:CDS 30.0%
TACATCTATAGTTACCGAAT+TGG + chr1_1:58641316-58641335 Msa0031820:three_prime_UTR 30.0%
ATTCTTCAACAATGCCAATT+CGG - chr1_1:58641333-58641352 None:intergenic 30.0%
TTGCATTCTGTATAATTCCA+TGG - chr1_1:58641403-58641422 None:intergenic 30.0%
!! AGATCAATCAAAGAGTGTTG+CGG - chr1_1:58631385-58631404 None:intergenic 35.0%
GAAATGCGAATTCAGCAATT+TGG - chr1_1:58631582-58631601 None:intergenic 35.0%
CCATTGAAGAAGATCTAAAC+GGG + chr1_1:58631678-58631697 Msa0031820:CDS 35.0%
!! CTTCTGATTGGCTTCATTTA+AGG + chr1_1:58632322-58632341 Msa0031820:intron 35.0%
! TAAGTTGTTGTTCTCTGTGT+AGG + chr1_1:58632478-58632497 Msa0031820:intron 35.0%
TAAGAAGAAACAAAATGGCG+TGG - chr1_1:58632630-58632649 None:intergenic 35.0%
! TAAGTGGATTTCAGGTATGT+TGG + chr1_1:58632874-58632893 Msa0031820:intron 35.0%
TGACTAACTAAGAACTGGTT+GGG - chr1_1:58632963-58632982 None:intergenic 35.0%
TTGACTAACTAAGAACTGGT+TGG - chr1_1:58632964-58632983 None:intergenic 35.0%
TAGACACTTCATTGTTGCAA+GGG - chr1_1:58633155-58633174 None:intergenic 35.0%
ATAGACACTTCATTGTTGCA+AGG - chr1_1:58633156-58633175 None:intergenic 35.0%
TTTATTTACCAGGCTGAGAT+TGG + chr1_1:58633318-58633337 Msa0031820:intron 35.0%
AATTCTGCAAGAGAAGTCTA+TGG + chr1_1:58633362-58633381 Msa0031820:CDS 35.0%
CAAGAGAAGTCTATGGATAT+GGG + chr1_1:58633369-58633388 Msa0031820:CDS 35.0%
GTTGGACTTCTATTCATGTT+TGG + chr1_1:58633579-58633598 Msa0031820:intron 35.0%
CTTCTATTCATGTTTGGATG+AGG + chr1_1:58633585-58633604 Msa0031820:intron 35.0%
TCTATTCATGTTTGGATGAG+GGG + chr1_1:58633587-58633606 Msa0031820:intron 35.0%
GACAGAAAAACTTAATTCGC+TGG - chr1_1:58633634-58633653 None:intergenic 35.0%
ATAATACCTCTCCATCAACA+AGG - chr1_1:58633785-58633804 None:intergenic 35.0%
! CACCTTATAAGTCAGTTTTG+TGG + chr1_1:58633971-58633990 Msa0031820:intron 35.0%
! ACCCACAAAACTGACTTATA+AGG - chr1_1:58633976-58633995 None:intergenic 35.0%
GTCCTTAAGTCCTGAATTTA+AGG + chr1_1:58634003-58634022 Msa0031820:intron 35.0%
CATAACAAATATTGCAGTGC+CGG + chr1_1:58634155-58634174 Msa0031820:intron 35.0%
GTGTTTATAATGTTGTGTGC+AGG - chr1_1:58634199-58634218 None:intergenic 35.0%
GCACACAACATTATAAACAC+TGG + chr1_1:58634199-58634218 Msa0031820:intron 35.0%
GCATTTGTAAACTAGTGTCT+TGG + chr1_1:58634244-58634263 Msa0031820:intron 35.0%
! GTTGACATGATTTTACATCG+AGG + chr1_1:58634448-58634467 Msa0031820:intron 35.0%
CTAGAAGGGAATATACTAGT+AGG - chr1_1:58634541-58634560 None:intergenic 35.0%
GAAACTGAAGTTTGTAGAAG+TGG + chr1_1:58634635-58634654 Msa0031820:CDS 35.0%
TGGATGGATAACAGATGATA+TGG - chr1_1:58634847-58634866 None:intergenic 35.0%
! GGACACTTTGTTGAAGTATT+TGG - chr1_1:58634933-58634952 None:intergenic 35.0%
ATTTAAAGGTGGTTAACGCA+AGG - chr1_1:58635418-58635437 None:intergenic 35.0%
GTTAACTTTCTCAAGGAACA+TGG + chr1_1:58635519-58635538 Msa0031820:CDS 35.0%
CCATCCTCATAGCATTATTT+AGG - chr1_1:58635652-58635671 None:intergenic 35.0%
CCTAAATAATGCTATGAGGA+TGG + chr1_1:58635649-58635668 Msa0031820:intron 35.0%
AAACAACTTTGCTGGCATAT+GGG - chr1_1:58635761-58635780 None:intergenic 35.0%
AAAACAACTTTGCTGGCATA+TGG - chr1_1:58635762-58635781 None:intergenic 35.0%
!! AATCTTTGGTAGCTTTGAGT+TGG + chr1_1:58635978-58635997 Msa0031820:intron 35.0%
!! TGTTAATTTGCTGGCTTTCA+CGG + chr1_1:58636021-58636040 Msa0031820:intron 35.0%
GAAAATAGAAGTCTTCCATG+TGG - chr1_1:58636058-58636077 None:intergenic 35.0%
TGTAATATGTATGAGCTGAG+TGG + chr1_1:58636080-58636099 Msa0031820:intron 35.0%
GTAATATGTATGAGCTGAGT+GGG + chr1_1:58636081-58636100 Msa0031820:intron 35.0%
TTGTAACATGGATCAGTGAT+TGG - chr1_1:58636112-58636131 None:intergenic 35.0%
TATGACTCAACCTAGGAAAA+AGG + chr1_1:58636450-58636469 Msa0031820:intron 35.0%
ATGACTCAACCTAGGAAAAA+GGG + chr1_1:58636451-58636470 Msa0031820:intron 35.0%
AATACTATCTGAATTGACCG+AGG + chr1_1:58636505-58636524 Msa0031820:intron 35.0%
AAAGAAATACATGGACTCCT+CGG - chr1_1:58636525-58636544 None:intergenic 35.0%
GTCCATGTATTTCTTTCCAT+TGG + chr1_1:58636529-58636548 Msa0031820:intron 35.0%
CACCAATGGAAAGAAATACA+TGG - chr1_1:58636534-58636553 None:intergenic 35.0%
AAATGAACTACTGACACCAA+TGG - chr1_1:58636548-58636567 None:intergenic 35.0%
! TAGTTCATTTTGAGCAGTGA+AGG + chr1_1:58636558-58636577 Msa0031820:intron 35.0%
AATTATATTTCCTGCCCCTA+GGG + chr1_1:58636639-58636658 Msa0031820:intron 35.0%
!! ACTGTTGATTCTTCAATGGA+AGG + chr1_1:58636930-58636949 Msa0031820:intron 35.0%
! TTTTACACTCTTTACTTGCG+AGG + chr1_1:58636957-58636976 Msa0031820:intron 35.0%
CAGAGATTGTGTAGTCATTT+GGG + chr1_1:58637028-58637047 Msa0031820:intron 35.0%
! TTGTGTAGTCATTTGGGTTA+TGG + chr1_1:58637034-58637053 Msa0031820:intron 35.0%
ATCCATATGAAGTTCTGTTC+AGG + chr1_1:58637136-58637155 Msa0031820:CDS 35.0%
CTGCAGATATAATTTCTGTG+AGG + chr1_1:58637295-58637314 Msa0031820:intron 35.0%
!!! ACCATTTTTTGTTCCCATGT+TGG - chr1_1:58637513-58637532 None:intergenic 35.0%
AAATGCTAATGAGTTCCCTA+AGG + chr1_1:58637684-58637703 Msa0031820:intron 35.0%
AATGCTAATGAGTTCCCTAA+GGG + chr1_1:58637685-58637704 Msa0031820:intron 35.0%
AATATGCGTATTCAGTGCAT+TGG + chr1_1:58637745-58637764 Msa0031820:intron 35.0%
! TCATTTTCAGATATGGGTTC+AGG + chr1_1:58637937-58637956 Msa0031820:intron 35.0%
!! TATGGGTTCAGGTTTTGTAT+AGG + chr1_1:58637948-58637967 Msa0031820:intron 35.0%
! GGTCAATTGATATGCCTTTT+TGG + chr1_1:58637969-58637988 Msa0031820:intron 35.0%
AGGACCTGTATAAACCAAAA+AGG - chr1_1:58637986-58638005 None:intergenic 35.0%
! TTGGTTTATACAGGTCCTTT+TGG + chr1_1:58637988-58638007 Msa0031820:intron 35.0%
! AACATTCTGACTTGTAAGAG+TGG + chr1_1:58638104-58638123 Msa0031820:intron 35.0%
GTTTGCATTACACCTTCTTT+AGG - chr1_1:58638190-58638209 None:intergenic 35.0%
GTGGCTATGAATCAAATTCT+TGG - chr1_1:58638244-58638263 None:intergenic 35.0%
GGTAATTGCTTCTCAAGAAA+TGG - chr1_1:58638315-58638334 None:intergenic 35.0%
CCAACATTCACATTACTGTT+TGG - chr1_1:58638428-58638447 None:intergenic 35.0%
CCAAACAGTAATGTGAATGT+TGG + chr1_1:58638425-58638444 Msa0031820:intron 35.0%
AGAACCCTACAAGAATTGTA+GGG - chr1_1:58638692-58638711 None:intergenic 35.0%
!! CATTGAAATTTCTGGGGTAT+CGG + chr1_1:58638730-58638749 Msa0031820:intron 35.0%
ATCTGTACAACCAACATACA+TGG + chr1_1:58638840-58638859 Msa0031820:intron 35.0%
TCTGTACAACCAACATACAT+GGG + chr1_1:58638841-58638860 Msa0031820:intron 35.0%
ACTATGTTTCCCATGTATGT+TGG - chr1_1:58638853-58638872 None:intergenic 35.0%
GATGCTTATTCACTAGTTCA+TGG - chr1_1:58638981-58639000 None:intergenic 35.0%
GAAAAATGAAACCCGTAATG+AGG - chr1_1:58639104-58639123 None:intergenic 35.0%
! TTTTTATGAGAACATTGGCG+AGG + chr1_1:58639146-58639165 Msa0031820:intron 35.0%
! TTTTATGAGAACATTGGCGA+GGG + chr1_1:58639147-58639166 Msa0031820:intron 35.0%
!! TTTAACATGTCAGGTGTTGA+TGG - chr1_1:58639221-58639240 None:intergenic 35.0%
GACTAGACATTTAACATGTC+AGG - chr1_1:58639230-58639249 None:intergenic 35.0%
GAATTTCCATGGAGCAAAAA+TGG - chr1_1:58639252-58639271 None:intergenic 35.0%
CAATTCTCTTACATTTCCCT+TGG + chr1_1:58639398-58639417 Msa0031820:intron 35.0%
AGCTAATTCATAACTTTGGC+AGG + chr1_1:58639509-58639528 Msa0031820:intron 35.0%
ATGCAAATGTGAAGACATTG+TGG + chr1_1:58639595-58639614 Msa0031820:CDS 35.0%
TGCAAATGTGAAGACATTGT+GGG + chr1_1:58639596-58639615 Msa0031820:CDS 35.0%
TTCATCCTCATTATGTCATG+AGG + chr1_1:58639628-58639647 Msa0031820:CDS 35.0%
ATCCACTTAAACTCTGAGTT+TGG + chr1_1:58639678-58639697 Msa0031820:CDS 35.0%
TCCACTTAAACTCTGAGTTT+GGG + chr1_1:58639679-58639698 Msa0031820:CDS 35.0%
AAAAGGAGTGGATGATTGAT+AGG - chr1_1:58639728-58639747 None:intergenic 35.0%
AGCTGCAATTAGTAAACAGA+TGG - chr1_1:58639770-58639789 None:intergenic 35.0%
!!! TTTTGGCTTTGTGAAGTTCT+TGG - chr1_1:58639849-58639868 None:intergenic 35.0%
CACAAAGCCAAAACTACAAA+CGG + chr1_1:58639856-58639875 Msa0031820:CDS 35.0%
! AGAAACACCGTTTGTAGTTT+TGG - chr1_1:58639866-58639885 None:intergenic 35.0%
!! TATGACAATCGCTGTTTTGA+AGG + chr1_1:58639901-58639920 Msa0031820:CDS 35.0%
AGCAAAAATTGAAGTTACCC+TGG - chr1_1:58640088-58640107 None:intergenic 35.0%
! ATTTGAATTTTGCCAGCTTC+AGG - chr1_1:58640137-58640156 None:intergenic 35.0%
GAGCAATACAGCATTATTTG+TGG + chr1_1:58640178-58640197 Msa0031820:CDS 35.0%
ATGACAATCACAACGCAAAT+TGG - chr1_1:58640374-58640393 None:intergenic 35.0%
!! TTCGGAAATTTTAGTGCTGT+CGG + chr1_1:58640412-58640431 Msa0031820:intron 35.0%
GAACTATGATCTCCATCTAA+AGG + chr1_1:58640544-58640563 Msa0031820:intron 35.0%
TGTCATCGCTTTATACTTAC+AGG - chr1_1:58640780-58640799 None:intergenic 35.0%
TGCATGAAATTTATCAGCTG+AGG + chr1_1:58640879-58640898 Msa0031820:intron 35.0%
GCAACAGTTATAGGTTTATC+AGG - chr1_1:58640919-58640938 None:intergenic 35.0%
AAGAAGTCAGAGTTATCTGT+TGG + chr1_1:58641208-58641227 Msa0031820:three_prime_UTR 35.0%
GAATTGGCATTGTTGAAGAA+TGG + chr1_1:58641332-58641351 Msa0031820:three_prime_UTR 35.0%
TGCAACAAATATCAAGTCCA+TGG + chr1_1:58641383-58641402 Msa0031820:three_prime_UTR 35.0%
!!! TACTTTTTTCCTGTTGAGCA+TGG + chr1_1:58641486-58641505 Msa0031820:three_prime_UTR 35.0%
ATTCCAGCAACTAAGATCTT+AGG + chr1_1:58641510-58641529 Msa0031820:three_prime_UTR 35.0%
TTCCAGCAACTAAGATCTTA+GGG + chr1_1:58641511-58641530 Msa0031820:three_prime_UTR 35.0%
CCATTGACGTGATGAGATTT+GGG - chr1_1:58631353-58631372 None:intergenic 40.0%
CCTAGATCAAATGCACTAGA+AGG - chr1_1:58631638-58631657 None:intergenic 40.0%
CCTTCTAGTGCATTTGATCT+AGG + chr1_1:58631635-58631654 Msa0031820:CDS 40.0%
!! TTTGATCTAGGAGCATTCGT+TGG + chr1_1:58631647-58631666 Msa0031820:CDS 40.0%
CCCGTTTAGATCTTCTTCAA+TGG - chr1_1:58631681-58631700 None:intergenic 40.0%
! ATCGTTAGATGGACTTCAAC+AGG + chr1_1:58631824-58631843 Msa0031820:CDS 40.0%
TGTGCGCGATTCTTAAGAAA+AGG + chr1_1:58632017-58632036 Msa0031820:intron 40.0%
! TGAGAATGATTTGCGCAAAG+TGG + chr1_1:58632556-58632575 Msa0031820:CDS 40.0%
AGTGGAGTTGGATTCAATTC+AGG + chr1_1:58632574-58632593 Msa0031820:CDS 40.0%
GTAGCGATGATCTTACATGT+AGG + chr1_1:58632694-58632713 Msa0031820:intron 40.0%
! ACAACTCTGCCATTTATTGC+AGG + chr1_1:58632764-58632783 Msa0031820:intron 40.0%
CATATGGAAACTCTGCTAAG+TGG + chr1_1:58632858-58632877 Msa0031820:CDS 40.0%
! AACTCTGCTAAGTGGATTTC+AGG + chr1_1:58632866-58632885 Msa0031820:CDS 40.0%
!!! TGGGTGGTTCTGTTTTTGAT+CGG - chr1_1:58632944-58632963 None:intergenic 40.0%
ATCTGTCTTGTCCGAAAATC+AGG - chr1_1:58633021-58633040 None:intergenic 40.0%
AGACACTTCATTGTTGCAAG+GGG - chr1_1:58633154-58633173 None:intergenic 40.0%
GTGTCTATTTACCACCTTTG+AGG + chr1_1:58633168-58633187 Msa0031820:intron 40.0%
TACTAACAGATCCTCAAAGG+TGG - chr1_1:58633182-58633201 None:intergenic 40.0%
GCAAGAGAAGTCTATGGATA+TGG + chr1_1:58633368-58633387 Msa0031820:CDS 40.0%
AGTCTATGGATATGGGTTTG+AGG + chr1_1:58633376-58633395 Msa0031820:CDS 40.0%
! TTTGAGGCTTAAGAATCGCA+AGG + chr1_1:58633392-58633411 Msa0031820:CDS 40.0%
CATTATTATCCCTCCGAGAA+TGG + chr1_1:58633752-58633771 Msa0031820:CDS 40.0%
TTTGTTGAGACTTGAGAGTC+CGG + chr1_1:58633897-58633916 Msa0031820:intron 40.0%
! TTTGAAACAAGGGTCTGATC+TGG + chr1_1:58634071-58634090 Msa0031820:intron 40.0%
TGTAAACTAGTGTCTTGGCT+TGG + chr1_1:58634249-58634268 Msa0031820:intron 40.0%
GTAAACTAGTGTCTTGGCTT+GGG + chr1_1:58634250-58634269 Msa0031820:intron 40.0%
!! TAAAAGGAGTCTAGCTCTTC+TGG + chr1_1:58634289-58634308 Msa0031820:intron 40.0%
! TGTCTCTTCTTGGTCTTCTT+CGG + chr1_1:58634411-58634430 Msa0031820:intron 40.0%
!! TTGGTCTTCTTCGGCATTTT+AGG + chr1_1:58634420-58634439 Msa0031820:intron 40.0%
CAGCATGCATGTCAAGTATT+GGG - chr1_1:58634501-58634520 None:intergenic 40.0%
! TCTCACTTTGGATGCTTTTC+AGG + chr1_1:58634572-58634591 Msa0031820:intron 40.0%
GTTTGTAGAAGTGGACACAA+TGG + chr1_1:58634644-58634663 Msa0031820:CDS 40.0%
TGAAGTCAAATACCTGCAGA+TGG - chr1_1:58634867-58634886 None:intergenic 40.0%
GCTAGAGGAACCTTATCAAT+AGG - chr1_1:58635036-58635055 None:intergenic 40.0%
AACTCAACACCAGCAAACAT+GGG - chr1_1:58635086-58635105 None:intergenic 40.0%
AAACTCAACACCAGCAAACA+TGG - chr1_1:58635087-58635106 None:intergenic 40.0%
GCTAACAAGAGAACTAGTGA+AGG + chr1_1:58635367-58635386 Msa0031820:intron 40.0%
! TAACGCAAGGAGGTATACAA+TGG - chr1_1:58635405-58635424 None:intergenic 40.0%
!!! GGGAAATGCATTTTTAGTGG+GGG - chr1_1:58635915-58635934 None:intergenic 40.0%
!!! GGGGAAATGCATTTTTAGTG+GGG - chr1_1:58635916-58635935 None:intergenic 40.0%
!!! GGGGGAAATGCATTTTTAGT+GGG - chr1_1:58635917-58635936 None:intergenic 40.0%
TCGCTATAAACTTCACTTCG+GGG - chr1_1:58635936-58635955 None:intergenic 40.0%
CTCGCTATAAACTTCACTTC+GGG - chr1_1:58635937-58635956 None:intergenic 40.0%
CCTCGCTATAAACTTCACTT+CGG - chr1_1:58635938-58635957 None:intergenic 40.0%
AGTTTATAGCGAGGTGTGAA+TGG + chr1_1:58635944-58635963 Msa0031820:intron 40.0%
ACGGTTAATGATGAACCACA+TGG + chr1_1:58636040-58636059 Msa0031820:intron 40.0%
! TGCACATATAGAGGAGCATA+AGG - chr1_1:58636242-58636261 None:intergenic 40.0%
TTATGCTCCTCTATATGTGC+AGG + chr1_1:58636241-58636260 Msa0031820:intron 40.0%
CTAAGAACCTGCACATATAG+AGG - chr1_1:58636251-58636270 None:intergenic 40.0%
CCAATGCTTGTATGTAAGCA+CGG - chr1_1:58636283-58636302 None:intergenic 40.0%
! ACAGCAGATCGATTCTTTAG+CGG - chr1_1:58636395-58636414 None:intergenic 40.0%
!!! GATCTGCTGTTTTTGCTCTT+GGG + chr1_1:58636405-58636424 Msa0031820:CDS 40.0%
!!! ATCTGCTGTTTTTGCTCTTG+GGG + chr1_1:58636406-58636425 Msa0031820:CDS 40.0%
! TTGAAGGTATGACTCAACCT+AGG + chr1_1:58636443-58636462 Msa0031820:intron 40.0%
! AGTGAAGGTTAGTCAAGACT+AGG + chr1_1:58636573-58636592 Msa0031820:intron 40.0%
GAATTATATTTCCTGCCCCT+AGG + chr1_1:58636638-58636657 Msa0031820:intron 40.0%
GCAGAGATTGTGTAGTCATT+TGG + chr1_1:58637027-58637046 Msa0031820:intron 40.0%
GCTATATGAGGAATCAATGC+CGG - chr1_1:58637096-58637115 None:intergenic 40.0%
CTCCTGAACAGAACTTCATA+TGG - chr1_1:58637141-58637160 None:intergenic 40.0%
TATTAAGTGCCATAGCAAGC+TGG - chr1_1:58637207-58637226 None:intergenic 40.0%
! CTAGGGTTTTTATGCACAGA+AGG - chr1_1:58637244-58637263 None:intergenic 40.0%
GCCAACATGGGAACAAAAAA+TGG + chr1_1:58637509-58637528 Msa0031820:intron 40.0%
!! ACTCTTAAAGAGTGCCCTTA+GGG - chr1_1:58637702-58637721 None:intergenic 40.0%
!! AACTCTTAAAGAGTGCCCTT+AGG - chr1_1:58637703-58637722 None:intergenic 40.0%
CCTATAGCATCATAGCAGTT+TGG - chr1_1:58638045-58638064 None:intergenic 40.0%
CCAAACTGCTATGATGCTAT+AGG + chr1_1:58638042-58638061 Msa0031820:CDS 40.0%
GGTTTCAGTCTTCAGTAAGA+AGG + chr1_1:58638125-58638144 Msa0031820:intron 40.0%
ATGTTATTGCGGCCTAAAGA+AGG + chr1_1:58638175-58638194 Msa0031820:intron 40.0%
TCATTGGAATTTCAAGAGGG+TGG - chr1_1:58638263-58638282 None:intergenic 40.0%
!!! AAAACTGACCCGTTGGTTTT+GGG + chr1_1:58638282-58638301 Msa0031820:intron 40.0%
GTTTGTATCCCAAAACCAAC+GGG - chr1_1:58638293-58638312 None:intergenic 40.0%
GGTTTGTATCCCAAAACCAA+CGG - chr1_1:58638294-58638313 None:intergenic 40.0%
CTTGACAGTGTGTTTATTGC+TGG + chr1_1:58638615-58638634 Msa0031820:intron 40.0%
AGTAGCCCTACAATTCTTGT+AGG + chr1_1:58638684-58638703 Msa0031820:intron 40.0%
GTAGCCCTACAATTCTTGTA+GGG + chr1_1:58638685-58638704 Msa0031820:intron 40.0%
CAGAACCCTACAAGAATTGT+AGG - chr1_1:58638693-58638712 None:intergenic 40.0%
GAACTATTTGACTGCTTAGC+TGG + chr1_1:58638758-58638777 Msa0031820:intron 40.0%
GTGAATAAGCATCTGCTACT+CGG + chr1_1:58638988-58639007 Msa0031820:intron 40.0%
AATGAAACCCGTAATGAGGA+AGG - chr1_1:58639100-58639119 None:intergenic 40.0%
TTTATGAGAACATTGGCGAG+GGG + chr1_1:58639148-58639167 Msa0031820:intron 40.0%
!! TCTAGTCCATTTTTGCTCCA+TGG + chr1_1:58639243-58639262 Msa0031820:intron 40.0%
GGGAAAACGTTGAATTTCCA+TGG - chr1_1:58639263-58639282 None:intergenic 40.0%
ACTTCTATAGGTAGAACGGA+GGG - chr1_1:58639283-58639302 None:intergenic 40.0%
TCAATATTTCCCTATGGCCT+CGG + chr1_1:58639532-58639551 Msa0031820:CDS 40.0%
TCGAATACCATCTTAAACCG+AGG - chr1_1:58639552-58639571 None:intergenic 40.0%
TTGCATTTCGCAAACTGTTG+AGG - chr1_1:58639581-58639600 None:intergenic 40.0%
TAACGCCTCATGACATAATG+AGG - chr1_1:58639636-58639655 None:intergenic 40.0%
! TTATGTCATGAGGCGTTATG+CGG + chr1_1:58639638-58639657 Msa0031820:CDS 40.0%
CCACTTAAACTCTGAGTTTG+GGG + chr1_1:58639680-58639699 Msa0031820:CDS 40.0%
TTAAACTCTGAGTTTGGGGA+TGG + chr1_1:58639684-58639703 Msa0031820:CDS 40.0%
ATTGCAGCTTGAACTGAATC+TGG + chr1_1:58639781-58639800 Msa0031820:intron 40.0%
! GAATCTGGAACGACTTAGAA+TGG + chr1_1:58639796-58639815 Msa0031820:CDS 40.0%
TCCATTTCAAATTGCTGGTG+TGG + chr1_1:58640013-58640032 Msa0031820:intron 40.0%
ACCACACCAGCAATTTGAAA+TGG - chr1_1:58640017-58640036 None:intergenic 40.0%
GCTTTCAATCCTTTCATACC+TGG + chr1_1:58640206-58640225 Msa0031820:intron 40.0%
GCAACAAAACCAGGTATGAA+AGG - chr1_1:58640218-58640237 None:intergenic 40.0%
GTTTATCAGGACTCGATGTT+GGG - chr1_1:58640906-58640925 None:intergenic 40.0%
! TGGTGAAGGATTTTGCAAGT+AGG + chr1_1:58640953-58640972 Msa0031820:CDS 40.0%
! TGAAGGATTTTGCAAGTAGG+TGG + chr1_1:58640956-58640975 Msa0031820:CDS 40.0%
!!! CAGCAATTTTTTGTGCGGTA+TGG + chr1_1:58641023-58641042 Msa0031820:CDS 40.0%
ATCCCTAAGATCTTAGTTGC+TGG - chr1_1:58641516-58641535 None:intergenic 40.0%
ATGAGATTTGGGAGACACGT+CGG - chr1_1:58631342-58631361 None:intergenic 45.0%
CCCAAATCTCATCACGTCAA+TGG + chr1_1:58631350-58631369 Msa0031820:five_prime_UTR 45.0%
GCCATTGACGTGATGAGATT+TGG - chr1_1:58631354-58631373 None:intergenic 45.0%
TGATGTCGCCTCAAACACAA+TGG + chr1_1:58631502-58631521 Msa0031820:CDS 45.0%
GCACAACTCGTATGAGACAT+CGG - chr1_1:58632002-58632021 None:intergenic 45.0%
!! TTAACCCATTTGGGTTGACC+TGG + chr1_1:58632185-58632204 Msa0031820:intron 45.0%
! GTTTATAGGAGCACACTCCA+AGG - chr1_1:58632227-58632246 None:intergenic 45.0%
AGGCAGGGACAACAAAAAGA+TGG - chr1_1:58632411-58632430 None:intergenic 45.0%
! TGATTTGCGCAAAGTGGAGT+TGG + chr1_1:58632562-58632581 Msa0031820:CDS 45.0%
CTAACTAAGAACTGGTTGGG+TGG - chr1_1:58632960-58632979 None:intergenic 45.0%
TTATGGAACCAATCTCAGCC+TGG - chr1_1:58633329-58633348 None:intergenic 45.0%
ACTTAATTCGCTGGGTAGCA+GGG - chr1_1:58633625-58633644 None:intergenic 45.0%
AACTTAATTCGCTGGGTAGC+AGG - chr1_1:58633626-58633645 None:intergenic 45.0%
ATCCAAGCTGGCTAAGTTTG+TGG + chr1_1:58633725-58633744 Msa0031820:CDS 45.0%
TTCCACAAACTTAGCCAGCT+TGG - chr1_1:58633730-58633749 None:intergenic 45.0%
TATTATCCCTCCGAGAATGG+TGG + chr1_1:58633755-58633774 Msa0031820:CDS 45.0%
ACAAGGATGTCCACCATTCT+CGG - chr1_1:58633768-58633787 None:intergenic 45.0%
!! ATGGTGGACATCCTTGTTGA+TGG + chr1_1:58633771-58633790 Msa0031820:CDS 45.0%
!! TCCGGCATTGACTAGAGATA+GGG + chr1_1:58633915-58633934 Msa0031820:intron 45.0%
ATTGACTAGAGATAGGGCCT+AGG + chr1_1:58633921-58633940 Msa0031820:intron 45.0%
GGGCCTAGGTAGTACTTATA+AGG + chr1_1:58633935-58633954 Msa0031820:intron 45.0%
! TACATTTTTGCCAGCTGTCC+AGG + chr1_1:58634047-58634066 Msa0031820:intron 45.0%
!! CTGTCCAGGCTTTGAAACAA+GGG + chr1_1:58634061-58634080 Msa0031820:intron 45.0%
!! GCTGGTTTGATGTCTCTTCT+TGG + chr1_1:58634401-58634420 Msa0031820:intron 45.0%
!! CATGCATGTCAAGTATTGGG+TGG - chr1_1:58634498-58634517 None:intergenic 45.0%
GCAGCATGCATGTCAAGTAT+TGG - chr1_1:58634502-58634521 None:intergenic 45.0%
!!! GGATGCTTTTCAGGTCAATG+AGG + chr1_1:58634581-58634600 Msa0031820:intron 45.0%
AACCTGAGCTTGAAAAGCTC+AGG + chr1_1:58634697-58634716 Msa0031820:CDS 45.0%
TCTGTTATCCATCCATCTGC+AGG + chr1_1:58634852-58634871 Msa0031820:intron 45.0%
GTCAAATACCTGCAGATGGA+TGG - chr1_1:58634863-58634882 None:intergenic 45.0%
TAAAGGTGGTTAACGCAAGG+AGG - chr1_1:58635415-58635434 None:intergenic 45.0%
!! CGGGGGAAATGCATTTTTAG+TGG - chr1_1:58635918-58635937 None:intergenic 45.0%
CGCTATAAACTTCACTTCGG+GGG - chr1_1:58635935-58635954 None:intergenic 45.0%
CCGAAGTGAAGTTTATAGCG+AGG + chr1_1:58635935-58635954 Msa0031820:intron 45.0%
CCGTGCTTACATACAAGCAT+TGG + chr1_1:58636280-58636299 Msa0031820:CDS 45.0%
GTAGAGACAAGAAGCAACAG+CGG + chr1_1:58636347-58636366 Msa0031820:CDS 45.0%
!!! CGATCTGCTGTTTTTGCTCT+TGG + chr1_1:58636404-58636423 Msa0031820:CDS 45.0%
!!! CTGTTTTTGCTCTTGGGGAT+AGG + chr1_1:58636411-58636430 Msa0031820:CDS 45.0%
AAACCAGCAACAGATCCCTA+GGG - chr1_1:58636657-58636676 None:intergenic 45.0%
TAAACCAGCAACAGATCCCT+AGG - chr1_1:58636658-58636677 None:intergenic 45.0%
!! GCACTTAAGGGCACTCTTTA+AGG - chr1_1:58637825-58637844 None:intergenic 45.0%
!!! TACAGGTCCTTTTGGTGTCA+TGG + chr1_1:58637996-58638015 Msa0031820:intron 45.0%
TGCTCATCCATGACACCAAA+AGG - chr1_1:58638006-58638025 None:intergenic 45.0%
TCGCATAATACACCAGCATC+AGG + chr1_1:58638080-58638099 Msa0031820:CDS 45.0%
GTCAGAATGTTACCTGATGC+TGG - chr1_1:58638095-58638114 None:intergenic 45.0%
AGGCCGCAATAACATCAATG+TGG - chr1_1:58638170-58638189 None:intergenic 45.0%
TCCAATGAAAACTGACCCGT+TGG + chr1_1:58638275-58638294 Msa0031820:intron 45.0%
! ACCAACGGGTCAGTTTTCAT+TGG - chr1_1:58638279-58638298 None:intergenic 45.0%
!!! GAAAACTGACCCGTTGGTTT+TGG + chr1_1:58638281-58638300 Msa0031820:intron 45.0%
TTCAGCTCATTATGTCTCGG+AGG + chr1_1:58638513-58638532 Msa0031820:intron 45.0%
TTTAGACAAGGTCAGCTTCC+TGG + chr1_1:58638559-58638578 Msa0031820:intron 45.0%
TTAGACAAGGTCAGCTTCCT+GGG + chr1_1:58638560-58638579 Msa0031820:intron 45.0%
TAATGAGGAAGGAGAGGGAA+CGG - chr1_1:58639089-58639108 None:intergenic 45.0%
TTCCCTCTCCTTCCTCATTA+CGG + chr1_1:58639089-58639108 Msa0031820:intron 45.0%
GACTTCTATAGGTAGAACGG+AGG - chr1_1:58639284-58639303 None:intergenic 45.0%
! CCAGCTAGAAAGTCTTGTCT+AGG - chr1_1:58639331-58639350 None:intergenic 45.0%
! CCTAGACAAGACTTTCTAGC+TGG + chr1_1:58639328-58639347 Msa0031820:intron 45.0%
!! AGACAAGACTTTCTAGCTGG+CGG + chr1_1:58639331-58639350 Msa0031820:intron 45.0%
TGACAAAACTTCAGACACCC+AGG - chr1_1:58639368-58639387 None:intergenic 45.0%
GGCAGGTCAATATTTCCCTA+TGG + chr1_1:58639526-58639545 Msa0031820:intron 45.0%
CATCTTAAACCGAGGCCATA+GGG - chr1_1:58639544-58639563 None:intergenic 45.0%
CCCCAAACTCAGAGTTTAAG+TGG - chr1_1:58639683-58639702 None:intergenic 45.0%
GAAGGTAAGAATCTGCAAGC+TGG + chr1_1:58639919-58639938 Msa0031820:intron 45.0%
TTGGAGAAGTTCTTCCTGCA+AGG - chr1_1:58640717-58640736 None:intergenic 45.0%
GGTTTATCAGGACTCGATGT+TGG - chr1_1:58640907-58640926 None:intergenic 45.0%
ACCTATAACTGTTGCGGAAG+TGG + chr1_1:58640924-58640943 Msa0031820:CDS 45.0%
TCCACTTCCGCAACAGTTAT+AGG - chr1_1:58640928-58640947 None:intergenic 45.0%
CTTGCAAAATCCTTCACCAG+TGG - chr1_1:58640952-58640971 None:intergenic 45.0%
! GGATTTTGCAAGTAGGTGGA+AGG + chr1_1:58640960-58640979 Msa0031820:CDS 45.0%
! TTTTGCAAGTAGGTGGAAGG+CGG + chr1_1:58640963-58640982 Msa0031820:CDS 45.0%
GACTCTCTGATTCCATCAAG+AGG + chr1_1:58641091-58641110 Msa0031820:CDS 45.0%
TGGACTTCAACAGGAGCTTG+AGG + chr1_1:58631833-58631852 Msa0031820:CDS 50.0%
ACCACCAGGTCAACCCAAAT+GGG - chr1_1:58632192-58632211 None:intergenic 50.0%
CTTAATTCGCTGGGTAGCAG+GGG - chr1_1:58633624-58633643 None:intergenic 50.0%
ATAGGTGGCTGAATCCAAGC+TGG + chr1_1:58633713-58633732 Msa0031820:intron 50.0%
! GGACATCCTTGTTGATGGAG+AGG + chr1_1:58633776-58633795 Msa0031820:CDS 50.0%
!! GTCCGGCATTGACTAGAGAT+AGG + chr1_1:58633914-58633933 Msa0031820:intron 50.0%
GCCCTATCTCTAGTCAATGC+CGG - chr1_1:58633919-58633938 None:intergenic 50.0%
TGTTTCAAAGCCTGGACAGC+TGG - chr1_1:58634060-58634079 None:intergenic 50.0%
!! GCTGTCCAGGCTTTGAAACA+AGG + chr1_1:58634060-58634079 Msa0031820:intron 50.0%
! CAGACCCTTGTTTCAAAGCC+TGG - chr1_1:58634068-58634087 None:intergenic 50.0%
!! TGCCTGAGCTTTTCAAGCTC+AGG - chr1_1:58634702-58634721 None:intergenic 50.0%
CAGGCAGAAAGCAGTCTCAA+AGG + chr1_1:58634716-58634735 Msa0031820:CDS 50.0%
GACAACATGCCCATGTTTGC+TGG + chr1_1:58635074-58635093 Msa0031820:intron 50.0%
TATGTATGAGCTGAGTGGGC+TGG + chr1_1:58636085-58636104 Msa0031820:intron 50.0%
! ATGTATGAGCTGAGTGGGCT+GGG + chr1_1:58636086-58636105 Msa0031820:intron 50.0%
! GCGGTCTTTTTGCAACAGCA+TGG + chr1_1:58636366-58636385 Msa0031820:CDS 50.0%
AACCAGCAACAGATCCCTAG+GGG - chr1_1:58636656-58636675 None:intergenic 50.0%
! GAGCTGGCTTCAGCTATATG+AGG - chr1_1:58637108-58637127 None:intergenic 50.0%
GAGCTTGCAGAAGCTGCTTA+TGG + chr1_1:58637158-58637177 Msa0031820:CDS 50.0%
!! GAGTACACTCCAGCTTGCTA+TGG + chr1_1:58637195-58637214 Msa0031820:intron 50.0%
AGTGCCCTTAAGTGCCCTAA+GGG + chr1_1:58637830-58637849 Msa0031820:intron 50.0%
! AGTGCCCTTAGGGCACTTAA+GGG - chr1_1:58637837-58637856 None:intergenic 50.0%
CTTGCTAACGAGTGCCCTTA+GGG - chr1_1:58637847-58637866 None:intergenic 50.0%
TCTTGCTAACGAGTGCCCTT+AGG - chr1_1:58637848-58637867 None:intergenic 50.0%
AGCTCATTATGTCTCGGAGG+CGG + chr1_1:58638516-58638535 Msa0031820:intron 50.0%
TTAAGCAGAACGCATTGCCC+AGG - chr1_1:58638580-58638599 None:intergenic 50.0%
TTCTTCACCTAGCTCCTAGC+TGG - chr1_1:58638934-58638953 None:intergenic 50.0%
! GATTAGCTCCGTATAGCTGC+AGG + chr1_1:58639021-58639040 Msa0031820:intron 50.0%
! TTTGGGGTCCTGCAGCTATA+CGG - chr1_1:58639032-58639051 None:intergenic 50.0%
TCCCTCTCCTTCCTCATTAC+GGG + chr1_1:58639090-58639109 Msa0031820:intron 50.0%
ACCCGTAATGAGGAAGGAGA+GGG - chr1_1:58639094-58639113 None:intergenic 50.0%
AACCCGTAATGAGGAAGGAG+AGG - chr1_1:58639095-58639114 None:intergenic 50.0%
TGATGGCAAGAAGGACTCGA+GGG - chr1_1:58639204-58639223 None:intergenic 50.0%
! TTGATGGCAAGAAGGACTCG+AGG - chr1_1:58639205-58639224 None:intergenic 50.0%
!! GTCAGGTGTTGATGGCAAGA+AGG - chr1_1:58639213-58639232 None:intergenic 50.0%
!! GACAAGACTTTCTAGCTGGC+GGG + chr1_1:58639332-58639351 Msa0031820:intron 50.0%
CCATCTTAAACCGAGGCCAT+AGG - chr1_1:58639545-58639564 None:intergenic 50.0%
CCTATGGCCTCGGTTTAAGA+TGG + chr1_1:58639542-58639561 Msa0031820:CDS 50.0%
TTGCTCGCATGCTTGATTCC+AGG + chr1_1:58640103-58640122 Msa0031820:intron 50.0%
CATGCTTGATTCCAGGAAGC+AGG + chr1_1:58640110-58640129 Msa0031820:intron 50.0%
GATTCCATCAAGAGGATCCC+TGG + chr1_1:58641099-58641118 Msa0031820:CDS 50.0%
TGTTCAATGCAGACCCACCA+GGG - chr1_1:58641119-58641138 None:intergenic 50.0%
TTGTTCAATGCAGACCCACC+AGG - chr1_1:58641120-58641139 None:intergenic 50.0%
! TGGTGGGTCTGCATTGAACA+AGG + chr1_1:58641119-58641138 Msa0031820:CDS 50.0%
!! ACCCATTTGGGTTGACCTGG+TGG + chr1_1:58632188-58632207 Msa0031820:intron 55.0%
CACCACCAGGTCAACCCAAA+TGG - chr1_1:58632193-58632212 None:intergenic 55.0%
!! TTGGGTTGACCTGGTGGTGT+TGG + chr1_1:58632194-58632213 Msa0031820:intron 55.0%
!! TTGACCTGGTGGTGTTGGCT+TGG + chr1_1:58632199-58632218 Msa0031820:intron 55.0%
!! TGACCTGGTGGTGTTGGCTT+GGG + chr1_1:58632200-58632219 Msa0031820:intron 55.0%
GGATGTCCACCATTCTCGGA+GGG - chr1_1:58633764-58633783 None:intergenic 55.0%
AGGATGTCCACCATTCTCGG+AGG - chr1_1:58633765-58633784 None:intergenic 55.0%
!! TTGCAGTGCCGGTGTTGAGA+AGG + chr1_1:58634166-58634185 Msa0031820:intron 55.0%
GCTGCAGACCTTCTCAACAC+CGG - chr1_1:58634177-58634196 None:intergenic 55.0%
GAGTGCCCTTAAGTGCCCTA+AGG + chr1_1:58637829-58637848 Msa0031820:intron 55.0%
! GAGTGCCCTTAGGGCACTTA+AGG - chr1_1:58637838-58637857 None:intergenic 55.0%
GCTAGCTGCTCCCAATCTTG+AGG - chr1_1:58638882-58638901 None:intergenic 55.0%
CTAGCTCCTAGCTGGTTGCA+GGG - chr1_1:58638926-58638945 None:intergenic 55.0%
CTCTGAGTTTGGGGATGGTC+AGG + chr1_1:58639689-58639708 Msa0031820:CDS 55.0%
TGCTGTCGGTCCTGATCTGA+AGG + chr1_1:58640426-58640445 Msa0031820:intron 55.0%
TCCATCAAGAGGATCCCTGG+TGG + chr1_1:58641102-58641121 Msa0031820:CDS 55.0%
CCATCAAGAGGATCCCTGGT+GGG + chr1_1:58641103-58641122 Msa0031820:CDS 55.0%
GCTGGAATGCCATGCTCAAC+AGG - chr1_1:58641498-58641517 None:intergenic 55.0%
!! GTGGTGTTGGCTTGGGACCT+TGG + chr1_1:58632207-58632226 Msa0031820:intron 60.0%
AGCAACAGATCCCTAGGGGC+AGG - chr1_1:58636652-58636671 None:intergenic 60.0%
TGCCCCTAGGGATCTGTTGC+TGG + chr1_1:58636651-58636670 Msa0031820:intron 60.0%
! TCGGAGGCGGATTCCATGCT+TGG + chr1_1:58638529-58638548 Msa0031820:CDS 60.0%
TCTCGACCCTGCAACCAGCT+AGG + chr1_1:58638917-58638936 Msa0031820:intron 60.0%
CCTAGCTCCTAGCTGGTTGC+AGG - chr1_1:58638927-58638946 None:intergenic 60.0%
CCTGCAACCAGCTAGGAGCT+AGG + chr1_1:58638924-58638943 Msa0031820:intron 60.0%
TCTAGCTGGCGGGACTCTCT+TGG + chr1_1:58639342-58639361 Msa0031820:intron 60.0%
CAGCTTCAGGACCTGCTTCC+TGG - chr1_1:58640124-58640143 None:intergenic 60.0%
CAGGAAGCAGGTCCTGAAGC+TGG + chr1_1:58640122-58640141 Msa0031820:intron 60.0%
TGTTGCGGAAGTGGAGCCAC+TGG + chr1_1:58640933-58640952 Msa0031820:CDS 60.0%
GGAAGTGGAGCCACTGGTGA+AGG + chr1_1:58640939-58640958 Msa0031820:CDS 60.0%
CCCACCAGGGATCCTCTTGA+TGG - chr1_1:58641106-58641125 None:intergenic 60.0%
GGTCCCAAGCCAACACCACC+AGG - chr1_1:58632206-58632225 None:intergenic 65.0%
TGGCGGGACTCTCTTGGCCT+GGG + chr1_1:58639348-58639367 Msa0031820:intron 65.0%
CTGGCGGGACTCTCTTGGCC+TGG + chr1_1:58639347-58639366 Msa0031820:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 58631323 58641612 58631323 ID=Msa0031820;Name=Msa0031820
chr1_1 mRNA 58631323 58641612 58631323 ID=Msa0031820-mRNA-1;Parent=Msa0031820;Name=Msa0031820-mRNA-1;_AED=0.05;_eAED=0.05;_QI=174|1|1|1|1|1|20|412|699
chr1_1 exon 58631323 58631523 58631323 ID=Msa0031820-mRNA-1:exon:17925;Parent=Msa0031820-mRNA-1
chr1_1 exon 58631632 58631699 58631632 ID=Msa0031820-mRNA-1:exon:17926;Parent=Msa0031820-mRNA-1
chr1_1 exon 58631815 58631872 58631815 ID=Msa0031820-mRNA-1:exon:17927;Parent=Msa0031820-mRNA-1
chr1_1 exon 58632500 58632595 58632500 ID=Msa0031820-mRNA-1:exon:17928;Parent=Msa0031820-mRNA-1
chr1_1 exon 58632786 58632887 58632786 ID=Msa0031820-mRNA-1:exon:17929;Parent=Msa0031820-mRNA-1
chr1_1 exon 58633330 58633413 58633330 ID=Msa0031820-mRNA-1:exon:17930;Parent=Msa0031820-mRNA-1
chr1_1 exon 58633717 58633797 58633717 ID=Msa0031820-mRNA-1:exon:17931;Parent=Msa0031820-mRNA-1
chr1_1 exon 58634594 58634737 58634594 ID=Msa0031820-mRNA-1:exon:17932;Parent=Msa0031820-mRNA-1
chr1_1 exon 58634874 58634965 58634874 ID=Msa0031820-mRNA-1:exon:17933;Parent=Msa0031820-mRNA-1
chr1_1 exon 58635512 58635593 58635512 ID=Msa0031820-mRNA-1:exon:17934;Parent=Msa0031820-mRNA-1
chr1_1 exon 58636263 58636448 58636263 ID=Msa0031820-mRNA-1:exon:17935;Parent=Msa0031820-mRNA-1
chr1_1 exon 58637081 58637196 58637081 ID=Msa0031820-mRNA-1:exon:17936;Parent=Msa0031820-mRNA-1
chr1_1 exon 58637301 58637359 58637301 ID=Msa0031820-mRNA-1:exon:17937;Parent=Msa0031820-mRNA-1
chr1_1 exon 58638001 58638101 58638001 ID=Msa0031820-mRNA-1:exon:17938;Parent=Msa0031820-mRNA-1
chr1_1 exon 58638518 58638568 58638518 ID=Msa0031820-mRNA-1:exon:17939;Parent=Msa0031820-mRNA-1
chr1_1 exon 58639531 58639710 58639531 ID=Msa0031820-mRNA-1:exon:17940;Parent=Msa0031820-mRNA-1
chr1_1 exon 58639788 58639922 58639788 ID=Msa0031820-mRNA-1:exon:17941;Parent=Msa0031820-mRNA-1
chr1_1 exon 58640125 58640199 58640125 ID=Msa0031820-mRNA-1:exon:17942;Parent=Msa0031820-mRNA-1
chr1_1 exon 58640722 58640779 58640722 ID=Msa0031820-mRNA-1:exon:17943;Parent=Msa0031820-mRNA-1
chr1_1 exon 58640896 58641612 58640896 ID=Msa0031820-mRNA-1:exon:17944;Parent=Msa0031820-mRNA-1
chr1_1 five_prime_UTR 58631323 58631496 58631323 ID=Msa0031820-mRNA-1:five_prime_utr;Parent=Msa0031820-mRNA-1
chr1_1 CDS 58631497 58631523 58631497 ID=Msa0031820-mRNA-1:cds;Parent=Msa0031820-mRNA-1
chr1_1 CDS 58631632 58631699 58631632 ID=Msa0031820-mRNA-1:cds;Parent=Msa0031820-mRNA-1
chr1_1 CDS 58631815 58631872 58631815 ID=Msa0031820-mRNA-1:cds;Parent=Msa0031820-mRNA-1
chr1_1 CDS 58632500 58632595 58632500 ID=Msa0031820-mRNA-1:cds;Parent=Msa0031820-mRNA-1
chr1_1 CDS 58632786 58632887 58632786 ID=Msa0031820-mRNA-1:cds;Parent=Msa0031820-mRNA-1
chr1_1 CDS 58633330 58633413 58633330 ID=Msa0031820-mRNA-1:cds;Parent=Msa0031820-mRNA-1
chr1_1 CDS 58633717 58633797 58633717 ID=Msa0031820-mRNA-1:cds;Parent=Msa0031820-mRNA-1
chr1_1 CDS 58634594 58634737 58634594 ID=Msa0031820-mRNA-1:cds;Parent=Msa0031820-mRNA-1
chr1_1 CDS 58634874 58634965 58634874 ID=Msa0031820-mRNA-1:cds;Parent=Msa0031820-mRNA-1
chr1_1 CDS 58635512 58635593 58635512 ID=Msa0031820-mRNA-1:cds;Parent=Msa0031820-mRNA-1
chr1_1 CDS 58636263 58636448 58636263 ID=Msa0031820-mRNA-1:cds;Parent=Msa0031820-mRNA-1
chr1_1 CDS 58637081 58637196 58637081 ID=Msa0031820-mRNA-1:cds;Parent=Msa0031820-mRNA-1
chr1_1 CDS 58637301 58637359 58637301 ID=Msa0031820-mRNA-1:cds;Parent=Msa0031820-mRNA-1
chr1_1 CDS 58638001 58638101 58638001 ID=Msa0031820-mRNA-1:cds;Parent=Msa0031820-mRNA-1
chr1_1 CDS 58638518 58638568 58638518 ID=Msa0031820-mRNA-1:cds;Parent=Msa0031820-mRNA-1
chr1_1 CDS 58639531 58639710 58639531 ID=Msa0031820-mRNA-1:cds;Parent=Msa0031820-mRNA-1
chr1_1 CDS 58639788 58639922 58639788 ID=Msa0031820-mRNA-1:cds;Parent=Msa0031820-mRNA-1
chr1_1 CDS 58640125 58640199 58640125 ID=Msa0031820-mRNA-1:cds;Parent=Msa0031820-mRNA-1
chr1_1 CDS 58640722 58640779 58640722 ID=Msa0031820-mRNA-1:cds;Parent=Msa0031820-mRNA-1
chr1_1 CDS 58640896 58641200 58640896 ID=Msa0031820-mRNA-1:cds;Parent=Msa0031820-mRNA-1
chr1_1 three_prime_UTR 58641201 58641612 58641201 ID=Msa0031820-mRNA-1:three_prime_utr;Parent=Msa0031820-mRNA-1
Gene Sequence

>Msa0031820

ATGGCTGATGTCGCCTCAAACACAATGAGTCCTTCTAGTGCATTTGATCTAGGAGCATTCGTTGGTGATTTAACCATTGAAGAAGATCTAAACGGTGATGATATATCGTTAGATGGACTTCAACAGGAGCTTGAGGAATGTAAGAATGATGAAGTTGTTGCAAATATACTATCTAAAGGTCCAAAACTTAGAGATTATACTAAGGGAGTTGAGAATGATTTGCGCAAAGTGGAGTTGGATTCAATTCAGGATTATATTAAAGAGAGTGATAATCTAGTCTCTCTTCATGACCAAATTCATGATTGTGATAATATCTTGTCACATATGGAAACTCTGCTAAGTGGATTTCAGGCTGAGATTGGTTCCATAAGTTCAGACATTAAAATTCTGCAAGAGAAGTCTATGGATATGGGTTTGAGGCTTAAGAATCGCAAGGTGGCTGAATCCAAGCTGGCTAAGTTTGTGGAAGACATTATTATCCCTCCGAGAATGGTGGACATCCTTGTTGATGGAGAGGTCAATGAGGAATACATGAGAACTCTTGAGATTCTAAGTAAGAAACTGAAGTTTGTAGAAGTGGACACAATGGTTAAAGCTTCAAAAGCTCTAAAAGATGTTCAACCTGAGCTTGAAAAGCTCAGGCAGAAAGCAGTCTCAAAGGTATTTGACTTCATTGTTCAGAAACTATATGCATTGAGAAAACCCAAAACAAATATCCAAATACTTCAACAAAGTGTCCTTTTAAAGTACAAGTATGTTGTTAACTTTCTCAAGGAACATGGCAAAGAAGTATATAATGAAGTTCGTGCAGCTTATATTGATACAATGAACAAGGTTCTTAGTGCTCATTTCCGTGCTTACATACAAGCATTGGAGAAACTGCAATTAGATATAGCAACATCCTATGATTTAATTGGTGTAGAGACAAGAAGCAACAGCGGTCTTTTTGCAACAGCATGGCAACCGCTAAAGAATCGATCTGCTGTTTTTGCTCTTGGGGATAGGATTAATATATTGAAGGAAATTGATGAACCGGCATTGATTCCTCATATAGCTGAAGCCAGCTCTATTAAATATCCATATGAAGTTCTGTTCAGGAGCTTGCAGAAGCTGCTTATGGATACTGCTACTTCAGAATATAATTTCTGTGAGGATTTTTATGGGGAACAACATATGTTCTATGAAATTTTTTCAGGTCCTTTTGGTGTCATGGATGAGCATTTCAGTACAATACTTCCAAACTGCTATGATGCTATAGGTCTAATGCTTATGATTCGCATAATACACCAGCATCAGCTCATTATGTCTCGGAGGCGGATTCCATGCTTGGATTCTTATTTAGACAAGGTCAATATTTCCCTATGGCCTCGGTTTAAGATGGTATTCGACATGCACCTCAACAGTTTGCGAAATGCAAATGTGAAGACATTGTGGGAAGATGATGTTCATCCTCATTATGTCATGAGGCGTTATGCGGAGTTTACTGCTTCACTTATCCACTTAAACTCTGAGTTTGGGGATGGTCAGCTTGAACTGAATCTGGAACGACTTAGAATGGCCATTGATGATTTACTTATCAAGCTTGCCAAGAACTTCACAAAGCCAAAACTACAAACGGTGTTTCTTATAAACAATTATGATATGACAATCGCTGTTTTGAAGGAAGCAGGTCCTGAAGCTGGCAAAATTCAAATGCACTTTGAGGAACTACTGAAGAGCAATACAGCATTATTTGTGGAAGAACTTCTCCAAGAGCATTTTAATGATTTAATCAAGTTTGTCAAGGCTAAAGCCTCTGAGGACCCAACATCGAGTCCTGATAAACCTATAACTGTTGCGGAAGTGGAGCCACTGGTGAAGGATTTTGCAAGTAGGTGGAAGGCGGCAATAGAGTTGATGCACAAAGATGTCATCACATCTTTCAGCAATTTTTTGTGCGGTATGGAGATCTTAAGAGCTGCATTGACCCAATTGCTACTTTACTATACGAGACTCTCTGATTCCATCAAGAGGATCCCTGGTGGGTCTGCATTGAACAAGGATCTTGTTTCCATATCTTCAATCATGTATGAGATTAGGAAATATTCGAGGACTTTCTAA

Protein sequence

>Msa0031820

MADVASNTMSPSSAFDLGAFVGDLTIEEDLNGDDISLDGLQQELEECKNDEVVANILSKGPKLRDYTKGVENDLRKVELDSIQDYIKESDNLVSLHDQIHDCDNILSHMETLLSGFQAEIGSISSDIKILQEKSMDMGLRLKNRKVAESKLAKFVEDIIIPPRMVDILVDGEVNEEYMRTLEILSKKLKFVEVDTMVKASKALKDVQPELEKLRQKAVSKVFDFIVQKLYALRKPKTNIQILQQSVLLKYKYVVNFLKEHGKEVYNEVRAAYIDTMNKVLSAHFRAYIQALEKLQLDIATSYDLIGVETRSNSGLFATAWQPLKNRSAVFALGDRINILKEIDEPALIPHIAEASSIKYPYEVLFRSLQKLLMDTATSEYNFCEDFYGEQHMFYEIFSGPFGVMDEHFSTILPNCYDAIGLMLMIRIIHQHQLIMSRRRIPCLDSYLDKVNISLWPRFKMVFDMHLNSLRNANVKTLWEDDVHPHYVMRRYAEFTASLIHLNSEFGDGQLELNLERLRMAIDDLLIKLAKNFTKPKLQTVFLINNYDMTIAVLKEAGPEAGKIQMHFEELLKSNTALFVEELLQEHFNDLIKFVKAKASEDPTSSPDKPITVAEVEPLVKDFASRWKAAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDSIKRIPGGSALNKDLVSISSIMYEIRKYSRTF*