Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307870 | XP_003626627.1 | 87.815 | 476 | 10 | 1 | 1 | 476 | 1 | 428 | 0.0 | 845 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307870 | Q1STP4 | 87.815 | 476 | 10 | 1 | 1 | 476 | 1 | 428 | 0.0 | 845 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0024710 | Msa1307870 | 0.838897 | 2.189110e-57 | -8.615850e-47 |
| Msa0035120 | Msa1307870 | 0.822312 | 2.534350e-53 | -8.615850e-47 |
| Msa0056450 | Msa1307870 | 0.804924 | 1.710204e-49 | -8.615850e-47 |
| Msa0065680 | Msa1307870 | -0.801381 | 9.248779e-49 | -8.615850e-47 |
| Msa0108410 | Msa1307870 | 0.843297 | 1.527925e-58 | -8.615850e-47 |
| Msa0638350 | Msa1307870 | 0.818894 | 1.544681e-52 | -8.615850e-47 |
| Msa0702720 | Msa1307870 | 0.802974 | 4.347974e-49 | -8.615850e-47 |
| Msa0733010 | Msa1307870 | 0.812864 | 3.421444e-51 | -8.615850e-47 |
| Msa0743930 | Msa1307870 | 0.802650 | 5.071971e-49 | -8.615850e-47 |
| Msa0751260 | Msa1307870 | 0.807597 | 4.675793e-50 | -8.615850e-47 |
| Msa0757800 | Msa1307870 | 0.806983 | 6.310016e-50 | -8.615850e-47 |
| Msa0760560 | Msa1307870 | 0.812860 | 3.427000e-51 | -8.615850e-47 |
| Msa0765270 | Msa1307870 | 0.804191 | 2.431871e-49 | -8.615850e-47 |
| Msa0784480 | Msa1307870 | 0.812483 | 4.145343e-51 | -8.615850e-47 |
| Msa0789100 | Msa1307870 | 0.814831 | 1.261063e-51 | -8.615850e-47 |
| Msa0795070 | Msa1307870 | 0.805557 | 1.260040e-49 | -8.615850e-47 |
| Msa0811520 | Msa1307870 | 0.817112 | 3.904831e-52 | -8.615850e-47 |
| Msa0822500 | Msa1307870 | 0.805612 | 1.227497e-49 | -8.615850e-47 |
| Msa0826760 | Msa1307870 | 0.801906 | 7.217024e-49 | -8.615850e-47 |
| Msa0828660 | Msa1307870 | 0.808859 | 2.518360e-50 | -8.615850e-47 |
| Msa0833530 | Msa1307870 | 0.809559 | 1.782497e-50 | -8.615850e-47 |
| Msa0138360 | Msa1307870 | 0.800648 | 1.305862e-48 | -8.615850e-47 |
| Msa0139380 | Msa1307870 | 0.828351 | 9.434625e-55 | -8.615850e-47 |
| Msa0144360 | Msa1307870 | 0.827429 | 1.572057e-54 | -8.615850e-47 |
| Msa0183760 | Msa1307870 | 0.808219 | 3.449122e-50 | -8.615850e-47 |
| Msa0187030 | Msa1307870 | 0.814167 | 1.768262e-51 | -8.615850e-47 |
| Msa0189040 | Msa1307870 | 0.844575 | 6.942858e-59 | -8.615850e-47 |
| Msa0207350 | Msa1307870 | 0.814858 | 1.243497e-51 | -8.615850e-47 |
| Msa0207420 | Msa1307870 | 0.813720 | 2.219177e-51 | -8.615850e-47 |
| Msa0232020 | Msa1307870 | 0.812767 | 3.592910e-51 | -8.615850e-47 |
| Msa1227640 | Msa1307870 | 0.821509 | 3.888994e-53 | -8.615850e-47 |
| Msa1243870 | Msa1307870 | 0.814763 | 1.305399e-51 | -8.615850e-47 |
| Msa1267020 | Msa1307870 | 0.834388 | 3.085633e-56 | -8.615850e-47 |
| Msa1269890 | Msa1307870 | 0.815618 | 8.429696e-52 | -8.615850e-47 |
| Msa1269970 | Msa1307870 | 0.836281 | 1.026081e-56 | -8.615850e-47 |
| Msa1286610 | Msa1307870 | 0.800165 | 1.637653e-48 | -8.615850e-47 |
| Msa1306560 | Msa1307870 | 0.807313 | 5.372257e-50 | -8.615850e-47 |
| Msa1307870 | Msa1365760 | 0.842501 | 2.488031e-58 | -8.615850e-47 |
| Msa1307870 | Msa1369690 | 0.810089 | 1.370781e-50 | -8.615850e-47 |
| Msa1307870 | Msa1371520 | 0.802614 | 5.160120e-49 | -8.615850e-47 |
| Msa1307870 | Msa1403710 | 0.805491 | 1.301325e-49 | -8.615850e-47 |
| Msa1307870 | Msa1413610 | 0.804392 | 2.207867e-49 | -8.615850e-47 |
| Msa1307870 | Msa1418240 | 0.846593 | 1.970252e-59 | -8.615850e-47 |
| Msa1307870 | Msa1425020 | 0.826330 | 2.878393e-54 | -8.615850e-47 |
| Msa1307870 | Msa1434340 | 0.814176 | 1.760111e-51 | -8.615850e-47 |
| Msa1307870 | Msa1440310 | 0.810374 | 1.190119e-50 | -8.615850e-47 |
| Msa1307870 | Msa1444560 | 0.812841 | 3.460788e-51 | -8.615850e-47 |
| Msa1307870 | Msa1452680 | 0.812924 | 3.318756e-51 | -8.615850e-47 |
| Msa1307870 | Msa1453360 | 0.819092 | 1.392764e-52 | -8.615850e-47 |
| Msa1307870 | Msa1461540 | 0.801275 | 9.723505e-49 | -8.615850e-47 |
| Msa0367870 | Msa1307870 | 0.804439 | 2.158638e-49 | -8.615850e-47 |
| Msa0382370 | Msa1307870 | 0.813228 | 2.847027e-51 | -8.615850e-47 |
| Msa0403640 | Msa1307870 | 0.816422 | 5.574507e-52 | -8.615850e-47 |
| Msa0432160 | Msa1307870 | 0.826708 | 2.339537e-54 | -8.615850e-47 |
| Msa0450400 | Msa1307870 | -0.820851 | 5.512791e-53 | -8.615850e-47 |
| Msa0460590 | Msa1307870 | 0.810083 | 1.375163e-50 | -8.615850e-47 |
| Msa0468250 | Msa1307870 | 0.807731 | 4.379459e-50 | -8.615850e-47 |
| Msa0473050 | Msa1307870 | 0.817027 | 4.079096e-52 | -8.615850e-47 |
| Msa0476680 | Msa1307870 | 0.831277 | 1.828807e-55 | -8.615850e-47 |
| Msa0479200 | Msa1307870 | 0.819884 | 9.187405e-53 | -8.615850e-47 |
| Msa1004800 | Msa1307870 | 0.811118 | 8.214724e-51 | -8.615850e-47 |
| Msa1004970 | Msa1307870 | 0.805683 | 1.185637e-49 | -8.615850e-47 |
| Msa1028280 | Msa1307870 | 0.801057 | 1.077249e-48 | -8.615850e-47 |
| Msa1034500 | Msa1307870 | 0.853599 | 2.147575e-61 | -8.615850e-47 |
| Msa1038080 | Msa1307870 | 0.802321 | 5.931120e-49 | -8.615850e-47 |
| Msa1048220 | Msa1307870 | 0.807833 | 4.166178e-50 | -8.615850e-47 |
| Msa1079860 | Msa1307870 | 0.825961 | 3.523532e-54 | -8.615850e-47 |
| Msa1089450 | Msa1307870 | 0.816760 | 4.682714e-52 | -8.615850e-47 |
| Msa0241140 | Msa1307870 | 0.804627 | 1.972985e-49 | -8.615850e-47 |
| Msa0253290 | Msa1307870 | 0.814338 | 1.620731e-51 | -8.615850e-47 |
| Msa0255850 | Msa1307870 | 0.803259 | 3.796713e-49 | -8.615850e-47 |
| Msa0259220 | Msa1307870 | 0.801845 | 7.429097e-49 | -8.615850e-47 |
| Msa0281430 | Msa1307870 | 0.817646 | 2.960589e-52 | -8.615850e-47 |
| Msa0296820 | Msa1307870 | 0.818812 | 1.612268e-52 | -8.615850e-47 |
| Msa0317970 | Msa1307870 | 0.820525 | 6.551303e-53 | -8.615850e-47 |
| Msa0330340 | Msa1307870 | 0.803241 | 3.828758e-49 | -8.615850e-47 |
| Msa0341900 | Msa1307870 | 0.813465 | 2.525332e-51 | -8.615850e-47 |
| Msa0342010 | Msa1307870 | 0.825342 | 4.938489e-54 | -8.615850e-47 |
| Msa0358400 | Msa1307870 | 0.809249 | 2.077359e-50 | -8.615850e-47 |
| Msa1111380 | Msa1307870 | 0.815842 | 7.513568e-52 | -8.615850e-47 |
| Msa1142670 | Msa1307870 | 0.802608 | 5.175747e-49 | -8.615850e-47 |
| Msa1170760 | Msa1307870 | 0.811825 | 5.769077e-51 | -8.615850e-47 |
| Msa0483740 | Msa1307870 | 0.810458 | 1.141445e-50 | -8.615850e-47 |
| Msa0485240 | Msa1307870 | 0.832959 | 7.016689e-56 | -8.615850e-47 |
| Msa0510290 | Msa1307870 | 0.804792 | 1.822551e-49 | -8.615850e-47 |
| Msa0521010 | Msa1307870 | 0.828715 | 7.705730e-55 | -8.615850e-47 |
| Msa0521670 | Msa1307870 | 0.827333 | 1.657355e-54 | -8.615850e-47 |
| Msa0522150 | Msa1307870 | 0.834326 | 3.197653e-56 | -8.615850e-47 |
| Msa0579660 | Msa1307870 | 0.802295 | 6.003448e-49 | -8.615850e-47 |
| Msa0845110 | Msa1307870 | 0.800571 | 1.353827e-48 | -8.615850e-47 |
| Msa0851730 | Msa1307870 | 0.832851 | 7.465389e-56 | -8.615850e-47 |
| Msa0867010 | Msa1307870 | 0.800198 | 1.612442e-48 | -8.615850e-47 |
| Msa0871720 | Msa1307870 | 0.801300 | 9.607245e-49 | -8.615850e-47 |
| Msa0903780 | Msa1307870 | 0.804232 | 2.385054e-49 | -8.615850e-47 |
| Msa0937020 | Msa1307870 | 0.814283 | 1.667336e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307870 | MtrunA17_Chr8g0334391 | 87.815 | 476 | 10 | 1 | 1 | 476 | 1 | 428 | 0.0 | 845 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307870 | AT5G01010.1 | 59.667 | 481 | 135 | 4 | 3 | 474 | 2 | 432 | 0.0 | 575 |
| Msa1307870 | AT5G01010.2 | 58.884 | 484 | 175 | 6 | 3 | 474 | 2 | 473 | 0.0 | 560 |
| Msa1307870 | AT5G01010.5 | 58.884 | 484 | 175 | 6 | 3 | 474 | 2 | 473 | 0.0 | 560 |
| Msa1307870 | AT5G01010.3 | 59.188 | 468 | 132 | 4 | 3 | 461 | 2 | 419 | 0.0 | 553 |
| Msa1307870 | AT5G01010.4 | 57.645 | 484 | 174 | 7 | 3 | 474 | 2 | 466 | 0.0 | 539 |
Find 141 sgRNAs with CRISPR-Local
Find 547 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCTTATTGTACTCTAATT+TGG | 0.147570 | 8_4:-3896867 | Msa1307870:CDS |
| GGGGAATTTCTGCACATTAA+TGG | 0.230921 | 8_4:-3896539 | Msa1307870:CDS |
| TCGTACTATGACCACTGATT+TGG | 0.264731 | 8_4:-3903718 | Msa1307870:CDS |
| CTGGAAGCTATAAACTGATA+TGG | 0.273766 | 8_4:-3896516 | Msa1307870:CDS |
| AGAGGTTCATCACATTTCTT+AGG | 0.283237 | 8_4:-3899372 | Msa1307870:intron |
| TTAGGATATTGGATTTAGTT+TGG | 0.287616 | 8_4:-3896938 | Msa1307870:intron |
| TTTGTTTATTGTTAGGATAT+TGG | 0.304837 | 8_4:-3896949 | Msa1307870:intron |
| CGTACTATGACCACTGATTT+GGG | 0.334259 | 8_4:-3903717 | Msa1307870:CDS |
| TGTATAAAATTGTCAATTGT+AGG | 0.349727 | 8_4:-3895862 | Msa1307870:three_prime_UTR |
| AGTACAAGGCAAGATAAATA+TGG | 0.362025 | 8_4:-3897056 | Msa1307870:intron |
| TTCATTCCAGCAGATGTTGC+TGG | 0.364334 | 8_4:-3897544 | Msa1307870:CDS |
| GGCTGCTTCTACAGAGGGTT+TGG | 0.370132 | 8_4:-3903835 | Msa1307870:CDS |
| CGACAGGAAGGCCCTAGTTA+TGG | 0.377287 | 8_4:+3903809 | None:intergenic |
| ATGAAGATTGATAAGGCTTC+TGG | 0.378509 | 8_4:+3896829 | None:intergenic |
| GTTCTTCATCAAGCAATATC+AGG | 0.386716 | 8_4:+3895786 | None:intergenic |
| GATTCTTCCTTTCATTATCA+TGG | 0.387212 | 8_4:-3901107 | Msa1307870:CDS |
| TTGCTGGTGCAGTGGAAATA+AGG | 0.393624 | 8_4:-3897528 | Msa1307870:intron |
| ACTGTAGGTGCTACGGTATA+AGG | 0.397024 | 8_4:-3896109 | Msa1307870:intron |
| AGAGAAGAGAAGAGAAGAAA+GGG | 0.409789 | 8_4:-3903912 | Msa1307870:five_prime_UTR |
| AACCAAATTAGAGTACAATA+AGG | 0.410834 | 8_4:+3896865 | None:intergenic |
| AATGGCACTGGCTCTGCAAC+AGG | 0.413130 | 8_4:+3896072 | None:intergenic |
| CATCAATCTTATGCGGAGGT+TGG | 0.413624 | 8_4:+3903667 | None:intergenic |
| CTGGATTACATTACCGTGTC+TGG | 0.414338 | 8_4:+3903579 | None:intergenic |
| AAAATTACTAGTACATCAAT+AGG | 0.416004 | 8_4:+3896002 | None:intergenic |
| GCAAGCAGAGGTGGATGCTT+TGG | 0.423060 | 8_4:-3903271 | Msa1307870:CDS |
| GATAGGAGGTGTAAAGGAGC+TGG | 0.426347 | 8_4:-3895902 | Msa1307870:three_prime_UTR |
| ATCAATCTTATGCGGAGGTT+GGG | 0.427319 | 8_4:+3903668 | None:intergenic |
| AGGGGAACAGTTAGCTGTCT+TGG | 0.427621 | 8_4:-3899428 | Msa1307870:CDS |
| GTGGATGCTTTGGTAAATTC+TGG | 0.428219 | 8_4:-3903261 | Msa1307870:CDS |
| GATATTGCTTGATGAAGAAC+AGG | 0.430713 | 8_4:-3895783 | Msa1307870:three_prime_UTR |
| AAGAGAAGAGAAGAGAAGAA+AGG | 0.432226 | 8_4:-3903913 | Msa1307870:five_prime_UTR |
| AAGAGAAGAAAGGGAAAGGT+GGG | 0.432817 | 8_4:-3903903 | Msa1307870:five_prime_UTR |
| GGAGAAAGAGGAGGAGTGAA+GGG | 0.434405 | 8_4:+3903768 | None:intergenic |
| GACAGGAAGGCCCTAGTTAT+GGG | 0.435903 | 8_4:+3903810 | None:intergenic |
| GGAAGGGATAGGAGGTGTAA+AGG | 0.439158 | 8_4:-3895908 | Msa1307870:three_prime_UTR |
| TCATCGCACTTTGACCACTT+TGG | 0.439826 | 8_4:-3903409 | Msa1307870:CDS |
| TTCGAGAGGGATCGATGAAT+GGG | 0.445075 | 8_4:-3903955 | Msa1307870:five_prime_UTR |
| TCCGATGGCTGCTTCTACAG+AGG | 0.447189 | 8_4:-3903841 | Msa1307870:exon |
| AATTGAACACATCTCGATCT+TGG | 0.449135 | 8_4:+3895943 | None:intergenic |
| AACAAAACATGATACAGAAC+TGG | 0.451046 | 8_4:+3896750 | None:intergenic |
| ACCCTCGTCAAGTACCTTGT+TGG | 0.452026 | 8_4:-3903141 | Msa1307870:CDS |
| TGTTCAATTGATTTCTATGA+AGG | 0.457670 | 8_4:-3895929 | Msa1307870:three_prime_UTR |
| GTAGAAGCAGCCATCGGAAT+CGG | 0.457672 | 8_4:+3903846 | None:intergenic |
| AGCTGTTGATGTCTACACTA+TGG | 0.459802 | 8_4:-3899401 | Msa1307870:CDS |
| ATTCGAGAGGGATCGATGAA+TGG | 0.460080 | 8_4:-3903956 | Msa1307870:five_prime_UTR |
| AGGGTTTGGTGCCCATAACT+AGG | 0.461857 | 8_4:-3903821 | Msa1307870:CDS |
| GCGATGACGCTGCTCCTCCA+TGG | 0.464270 | 8_4:+3901176 | None:intergenic |
| GTATAAAATTGTCAATTGTA+GGG | 0.468884 | 8_4:-3895861 | Msa1307870:three_prime_UTR |
| ATTCTTCCTTTCATTATCAT+GGG | 0.475061 | 8_4:-3901106 | Msa1307870:CDS |
| TTTGAGCTTCCCAAGAATAA+CGG | 0.475966 | 8_4:+3903440 | None:intergenic |
| CAAAGAAAGATCACGAAGAA+TGG | 0.476155 | 8_4:+3895725 | None:intergenic |
| GCTCAGCTAGGCTCTGCAAC+AGG | 0.476961 | 8_4:-3903174 | Msa1307870:CDS |
| TTACCCCATTTCATACGAAA+AGG | 0.477327 | 8_4:+3895684 | None:intergenic |
| GAAGTAAGGTGAGAGACGTC+TGG | 0.478606 | 8_4:+3903747 | None:intergenic |
| TTGCATCAGTCGAATGGCAC+TGG | 0.479589 | 8_4:+3896060 | None:intergenic |
| TTGGAGTTTGCAAGTCCTAC+CGG | 0.480664 | 8_4:-3896919 | Msa1307870:CDS |
| ACTGCACCAGCAACATCTGC+TGG | 0.481617 | 8_4:+3897538 | None:intergenic |
| TGATGAAGAACAGGATAGTA+AGG | 0.486091 | 8_4:-3895774 | Msa1307870:three_prime_UTR |
| GTGATCGATATGCTCTTCTC+TGG | 0.488861 | 8_4:-3903227 | Msa1307870:CDS |
| TGGAGAAAGAGGAGGAGTGA+AGG | 0.493800 | 8_4:+3903767 | None:intergenic |
| TGGAAGCTATAAACTGATAT+GGG | 0.497013 | 8_4:-3896515 | Msa1307870:CDS |
| ACGGAAAATTGAATATTGTC+AGG | 0.498862 | 8_4:+3903459 | None:intergenic |
| GGATAGTAAGGATAGTAAGA+AGG | 0.502124 | 8_4:-3895762 | Msa1307870:three_prime_UTR |
| GAAGAGAAGAAAGGGAAAGG+TGG | 0.502485 | 8_4:-3903904 | Msa1307870:five_prime_UTR |
| ATGATAATGAAAGGAAGAAT+CGG | 0.504065 | 8_4:+3901109 | None:intergenic |
| CAATTGATTTCTATGAAGGA+AGG | 0.504987 | 8_4:-3895925 | Msa1307870:three_prime_UTR |
| GGCATGAGTAATTAGAACTT+CGG | 0.505469 | 8_4:+3895964 | None:intergenic |
| TGAGAGACGTCTGGAGAAAG+AGG | 0.507695 | 8_4:+3903756 | None:intergenic |
| GAACTGGATAACGGAGAAGA+AGG | 0.512278 | 8_4:+3896766 | None:intergenic |
| TAGTACGAAGCAGAGAAGTA+AGG | 0.514503 | 8_4:+3903733 | None:intergenic |
| GAGGAATAAGCAAGCAGAGG+TGG | 0.517070 | 8_4:-3903280 | Msa1307870:CDS |
| AATTTCTGCACATTAATGGC+TGG | 0.520564 | 8_4:-3896535 | Msa1307870:CDS |
| TAGGAAGCCAACTGTTGTAA+TGG | 0.521221 | 8_4:-3895822 | Msa1307870:three_prime_UTR |
| ATTGAGGTGAGGCTGTATAA+TGG | 0.524864 | 8_4:+3901144 | None:intergenic |
| CCGATGGCTGCTTCTACAGA+GGG | 0.525140 | 8_4:-3903840 | Msa1307870:CDS |
| AGAGAAGAGAAGAAAGGGAA+AGG | 0.526427 | 8_4:-3903907 | Msa1307870:five_prime_UTR |
| GAGGAGCAGCGTCATCGCTA+TGG | 0.528258 | 8_4:-3901171 | Msa1307870:CDS |
| CAGTAAACTCGTATATTGCA+TGG | 0.528695 | 8_4:-3897090 | Msa1307870:CDS |
| CGATGACGCTGCTCCTCCAT+GGG | 0.529566 | 8_4:+3901177 | None:intergenic |
| AAAGAGATAAGTGTTCCAGC+TGG | 0.530707 | 8_4:-3897418 | Msa1307870:CDS |
| TGGAGTTTGCAAGTCCTACC+GGG | 0.533936 | 8_4:-3896918 | Msa1307870:CDS |
| TCTTCTCTGGAAACAACAAA+TGG | 0.535849 | 8_4:-3903214 | Msa1307870:CDS |
| ATATCAGGTTATACTTTCAG+TGG | 0.541751 | 8_4:-3897116 | Msa1307870:intron |
| ATGGGCGATGAAGATTGATA+AGG | 0.542844 | 8_4:+3896822 | None:intergenic |
| TCTATGAAGGAAGGGATAGG+AGG | 0.544149 | 8_4:-3895916 | Msa1307870:three_prime_UTR |
| AGAAGGCCTCTGCATTATGC+AGG | 0.549229 | 8_4:-3896028 | Msa1307870:three_prime_UTR |
| CTTATCTACTGGTAGGCCCA+TGG | 0.549474 | 8_4:-3901193 | Msa1307870:intron |
| CATGATACAGAACTGGATAA+CGG | 0.550313 | 8_4:+3896757 | None:intergenic |
| GGCAGATTAATGACGATGAC+GGG | 0.550469 | 8_4:-3901342 | Msa1307870:intron |
| TCAGACTCGTATCGGCGGTA+AGG | 0.558609 | 8_4:+3896657 | None:intergenic |
| ATTTCTATGAAGGAAGGGAT+AGG | 0.559182 | 8_4:-3895919 | Msa1307870:three_prime_UTR |
| GGGTTTGGTGCCCATAACTA+GGG | 0.559944 | 8_4:-3903820 | Msa1307870:CDS |
| GAGAAAGAGGAGGAGTGAAG+GGG | 0.566570 | 8_4:+3903769 | None:intergenic |
| ACATCTGCTGGAATGAAGAA+AGG | 0.566781 | 8_4:+3897550 | None:intergenic |
| CTAATAACTGAGCATGAGCA+TGG | 0.567533 | 8_4:-3904014 | Msa1307870:intron |
| AGCGTTCGCGTTGTTGTCTG+AGG | 0.569416 | 8_4:+3903307 | None:intergenic |
| TCCTCTGATTCCGATTCCGA+TGG | 0.570194 | 8_4:-3903856 | Msa1307870:exon |
| AATTGATTTCTATGAAGGAA+GGG | 0.572013 | 8_4:-3895924 | Msa1307870:three_prime_UTR |
| TATAATGACTGTAGGTGCTA+CGG | 0.577224 | 8_4:-3896116 | Msa1307870:intron |
| TCTGGAAACAACAAATGGAA+AGG | 0.577715 | 8_4:-3903209 | Msa1307870:CDS |
| CTCCAACAAGGTACTTGACG+AGG | 0.578652 | 8_4:+3903139 | None:intergenic |
| AAGAGATAAGTGTTCCAGCT+GGG | 0.581420 | 8_4:-3897417 | Msa1307870:CDS |
| ATCGTGCCCATGATAATGAA+AGG | 0.583994 | 8_4:+3901100 | None:intergenic |
| AACAACAAATGGAAAGGAGA+AGG | 0.585723 | 8_4:-3903203 | Msa1307870:CDS |
| ATAGGAGGTGTAAAGGAGCT+GGG | 0.592784 | 8_4:-3895901 | Msa1307870:three_prime_UTR |
| AGCAGATGTTGCTGGTGCAG+TGG | 0.597546 | 8_4:-3897536 | Msa1307870:CDS |
| AAATTGAATATTGTCAGGTG+TGG | 0.598417 | 8_4:+3903464 | None:intergenic |
| GTTTGTCGTAGTAAGACGAC+AGG | 0.600262 | 8_4:+3903793 | None:intergenic |
| AGTAAACTCGTATATTGCAT+GGG | 0.604344 | 8_4:-3897089 | Msa1307870:CDS |
| AGAGAAGAGCATATCGATCA+CGG | 0.605518 | 8_4:+3903229 | None:intergenic |
| TAACTTGGTCAGACTCGTAT+CGG | 0.609024 | 8_4:+3896649 | None:intergenic |
| TCTACACTATGGAGTTTGAG+AGG | 0.613870 | 8_4:-3899390 | Msa1307870:CDS |
| CCCTCTGTAGAAGCAGCCAT+CGG | 0.614975 | 8_4:+3903840 | None:intergenic |
| GCCATCGGAATCGGAATCAG+AGG | 0.615916 | 8_4:+3903855 | None:intergenic |
| GTACCTTGTTGGAGTTCCTG+AGG | 0.616247 | 8_4:-3903130 | Msa1307870:intron |
| AAGGAAGAGAATATTCGAGA+GGG | 0.616973 | 8_4:-3903968 | Msa1307870:five_prime_UTR |
| AAAGGAAGAGAATATTCGAG+AGG | 0.617206 | 8_4:-3903969 | Msa1307870:five_prime_UTR |
| AGGCAGATTAATGACGATGA+CGG | 0.621786 | 8_4:-3901343 | Msa1307870:CDS |
| ACAATCTAATTGGCCAGACA+CGG | 0.626292 | 8_4:-3903592 | Msa1307870:intron |
| AGAAGGCAATTAGCTCAGCT+AGG | 0.630724 | 8_4:-3903186 | Msa1307870:CDS |
| AACTGGATAACGGAGAAGAA+GGG | 0.635687 | 8_4:+3896767 | None:intergenic |
| GGCACTGGCTCTGCAACAGG+AGG | 0.638970 | 8_4:+3896075 | None:intergenic |
| ATCATCAATTCCCAAATCAG+TGG | 0.640263 | 8_4:+3903707 | None:intergenic |
| ATATTAATTTGTCAGAAAAG+GGG | 0.642676 | 8_4:-3899446 | Msa1307870:intron |
| AGAGAGGAATAAGCAAGCAG+AGG | 0.647377 | 8_4:-3903283 | Msa1307870:CDS |
| TCGGACAGAAAGAATCATTG+AGG | 0.651275 | 8_4:+3901128 | None:intergenic |
| CAGAAAGAATCATTGAGGTG+AGG | 0.658338 | 8_4:+3901133 | None:intergenic |
| GAGACGTCTGGAGAAAGAGG+AGG | 0.662195 | 8_4:+3903759 | None:intergenic |
| GTCGTAGTAAGACGACAGGA+AGG | 0.670921 | 8_4:+3903797 | None:intergenic |
| TCCAACAAGGTACTTGACGA+GGG | 0.671006 | 8_4:+3903140 | None:intergenic |
| ATAAGATTGATGAAAACATG+TGG | 0.672344 | 8_4:-3903656 | Msa1307870:CDS |
| AGGTATCCTGCATAATGCAG+AGG | 0.680243 | 8_4:+3896022 | None:intergenic |
| AGAGTTCCTCGAAAATCTTG+TGG | 0.681900 | 8_4:+3903330 | None:intergenic |
| AACAACGCGAACGCTCAGAG+AGG | 0.685075 | 8_4:-3903299 | Msa1307870:CDS |
| CTTGGTCAGACTCGTATCGG+CGG | 0.685715 | 8_4:+3896652 | None:intergenic |
| GGAGTTTGCAAGTCCTACCG+GGG | 0.692066 | 8_4:-3896917 | Msa1307870:CDS |
| GATTTGGAAAGATTCCAAAG+TGG | 0.692886 | 8_4:+3903395 | None:intergenic |
| ATCTACTGGTAGGCCCATGG+AGG | 0.694772 | 8_4:-3901190 | Msa1307870:intron |
| TCGAGAGGGATCGATGAATG+GGG | 0.698183 | 8_4:-3903954 | Msa1307870:five_prime_UTR |
| ATACCTCAGGAACTCCAACA+AGG | 0.706412 | 8_4:+3903127 | None:intergenic |
| GAGGTGAGGCTGTATAATGG+TGG | 0.725726 | 8_4:+3901147 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATAAAGAAGAA+AGG | + | chr8_4:3898467-3898486 | None:intergenic | 10.0% |
| !!! | TACTTTTCTTTTTAAAATTA+AGG | + | chr8_4:3899090-3899109 | None:intergenic | 10.0% |
| !!! | CTTATTTTTCTTTTTTATTA+GGG | - | chr8_4:3899164-3899183 | Msa1307870:intron | 10.0% |
| !!! | TTTTTTTTTTTTGTGAATAT+TGG | - | chr8_4:3900547-3900566 | Msa1307870:intron | 10.0% |
| !!! | TTAGTTCTTTTATAAAATTT+GGG | - | chr8_4:3900738-3900757 | Msa1307870:intron | 10.0% |
| !!! | TTATTCAATGAATAAAATTT+TGG | + | chr8_4:3901930-3901949 | None:intergenic | 10.0% |
| !!! | TTTTTTTGTAATGTAATTTT+AGG | - | chr8_4:3903192-3903211 | Msa1307870:CDS | 10.0% |
| !!! | TTTTTTGTAATGTAATTTTA+GGG | - | chr8_4:3903193-3903212 | Msa1307870:CDS | 10.0% |
| !! | ATATATTGATGAATTTAAAT+CGG | - | chr8_4:3903386-3903405 | Msa1307870:CDS | 10.0% |
| !! | AACAAAGAGAATAAAAAAAA+AGG | - | chr8_4:3895765-3895784 | Msa1307870:three_prime_UTR | 15.0% |
| !!! | CTGAAAATTCTAATTTTATA+TGG | + | chr8_4:3897480-3897499 | None:intergenic | 15.0% |
| !!! | GATCTTTTTATGTATTTTTA+TGG | + | chr8_4:3897611-3897630 | None:intergenic | 15.0% |
| !! | CAAATAAATATCAAAATCAT+TGG | + | chr8_4:3898975-3898994 | None:intergenic | 15.0% |
| !!! | GCTTATTTTTCTTTTTTATT+AGG | - | chr8_4:3899163-3899182 | Msa1307870:intron | 15.0% |
| !!! | GCTTATTTTTCTTTTTTATT+AGG | - | chr8_4:3899163-3899182 | Msa1307870:intron | 15.0% |
| !!! | TTTTTCTTTTTTATTAGGAA+TGG | - | chr8_4:3899361-3899380 | Msa1307870:intron | 15.0% |
| !!! | AAGATTTTATTTTTCTTCAT+TGG | + | chr8_4:3899570-3899589 | None:intergenic | 15.0% |
| !! | TTATATTGAAAAAAAACCTT+GGG | + | chr8_4:3899689-3899708 | None:intergenic | 15.0% |
| !!! | GTTATCTTTTATTTTTGTTT+TGG | - | chr8_4:3900071-3900090 | Msa1307870:intron | 15.0% |
| !!! | GTTAGTTCTTTTATAAAATT+TGG | - | chr8_4:3900737-3900756 | Msa1307870:intron | 15.0% |
| !! | ATTAACAACATAGATAAAAT+TGG | + | chr8_4:3901361-3901380 | None:intergenic | 15.0% |
| !! | TAGAAGATTTAGAAATTTAT+AGG | - | chr8_4:3901796-3901815 | Msa1307870:intron | 15.0% |
| !!! | ATTACAAAAAAATTTAAGAC+GGG | + | chr8_4:3903184-3903203 | None:intergenic | 15.0% |
| !! | CATTACAAAAAAATTTAAGA+CGG | + | chr8_4:3903185-3903204 | None:intergenic | 15.0% |
| !!! | TTTTTGTAATGTAATTTTAG+GGG | - | chr8_4:3903194-3903213 | Msa1307870:CDS | 15.0% |
| !! | TATATTGATGAATTTAAATC+GGG | - | chr8_4:3903387-3903406 | Msa1307870:CDS | 15.0% |
| !! | AGATTGTTGAAGTAAAAAAA+TGG | + | chr8_4:3896147-3896166 | None:intergenic | 20.0% |
| !!! | TTTTACTTCAACAATCTAAT+TGG | - | chr8_4:3896150-3896169 | Msa1307870:intron | 20.0% |
| !!! | GATACATTTTACATAGAAAT+AGG | + | chr8_4:3896707-3896726 | None:intergenic | 20.0% |
| !! | ACATTAAATCTAATGAAGAA+TGG | + | chr8_4:3896775-3896794 | None:intergenic | 20.0% |
| !!! | TCATAGTAGTTTTAAAATCA+GGG | - | chr8_4:3897081-3897100 | Msa1307870:CDS | 20.0% |
| !!! | TTATCCATTATTTAGTTTCA+AGG | + | chr8_4:3897201-3897220 | None:intergenic | 20.0% |
| !!! | ATTGTTTTGTTTTGAGTTTT+TGG | + | chr8_4:3897537-3897556 | None:intergenic | 20.0% |
| !! | AAAAACTCAAAACAAAACAA+TGG | - | chr8_4:3897536-3897555 | Msa1307870:CDS | 20.0% |
| !! | TAAAAACTTCAAAATTTCGT+GGG | + | chr8_4:3897793-3897812 | None:intergenic | 20.0% |
| !! | TTAAAAACTTCAAAATTTCG+TGG | + | chr8_4:3897794-3897813 | None:intergenic | 20.0% |
| !!! | AATTTTGAAGTTTTTAAACC+AGG | - | chr8_4:3897797-3897816 | Msa1307870:intron | 20.0% |
| !!! | ATTTTGAAGTTTTTAAACCA+GGG | - | chr8_4:3897798-3897817 | Msa1307870:intron | 20.0% |
| !! | TATGGTAATTAGAATGTATT+TGG | - | chr8_4:3898112-3898131 | Msa1307870:intron | 20.0% |
| !! | ATTTATCATAAGTATCACAT+GGG | + | chr8_4:3898270-3898289 | None:intergenic | 20.0% |
| !! | AATTTATCATAAGTATCACA+TGG | + | chr8_4:3898271-3898290 | None:intergenic | 20.0% |
| !!! | TTTTCTTTTTTATTAGGGAA+TGG | - | chr8_4:3899169-3899188 | Msa1307870:intron | 20.0% |
| !!! | TTTCTTTTTTATTAGGGAAT+GGG | - | chr8_4:3899170-3899189 | Msa1307870:intron | 20.0% |
| !!! | CAAAAATACTTTTCCAAAAA+AGG | + | chr8_4:3899224-3899243 | None:intergenic | 20.0% |
| !! | GTTATATTGAAAAAAAACCT+TGG | + | chr8_4:3899690-3899709 | None:intergenic | 20.0% |
| !! | TCAACATATTCACTAATAAT+GGG | + | chr8_4:3899876-3899895 | None:intergenic | 20.0% |
| !!! | TTTATGGTTAGAAGATTTTA+GGG | - | chr8_4:3899991-3900010 | Msa1307870:intron | 20.0% |
| !!! | CATATTAATTTGTCAGAAAA+GGG | - | chr8_4:3900305-3900324 | Msa1307870:intron | 20.0% |
| !!! | ATATTAATTTGTCAGAAAAG+GGG | - | chr8_4:3900306-3900325 | Msa1307870:intron | 20.0% |
| !!! | TGGTTTTTATGCAAAATTTA+TGG | - | chr8_4:3900567-3900586 | Msa1307870:intron | 20.0% |
| !!! | TTCTTTTATAAAATTTGGGT+TGG | - | chr8_4:3900742-3900761 | Msa1307870:intron | 20.0% |
| !! | AAGAAATAGATGATATTAAG+AGG | - | chr8_4:3901228-3901247 | Msa1307870:intron | 20.0% |
| !! | AGAAATAGATGATATTAAGA+GGG | - | chr8_4:3901229-3901248 | Msa1307870:intron | 20.0% |
| !! | GAATGATAAATTAATGCTTA+TGG | + | chr8_4:3901413-3901432 | None:intergenic | 20.0% |
| !! | TATATAAGTCTCAATGAAAT+TGG | + | chr8_4:3901543-3901562 | None:intergenic | 20.0% |
| !! | TTATATAATGTAAGATCCAA+TGG | - | chr8_4:3901556-3901575 | Msa1307870:intron | 20.0% |
| !! | GACAATATCAAATAATTCAA+CGG | + | chr8_4:3901754-3901773 | None:intergenic | 20.0% |
| !!! | ATAACTTCCTAATTTTGAAT+TGG | - | chr8_4:3901946-3901965 | Msa1307870:intron | 20.0% |
| !! | AAAAAGAAGTTTAGTATAGA+AGG | + | chr8_4:3902786-3902805 | None:intergenic | 20.0% |
| !!! | ACTTCTTTTTGTTTATTGTT+AGG | - | chr8_4:3902796-3902815 | Msa1307870:intron | 20.0% |
| !! | TTTGTTTATTGTTAGGATAT+TGG | - | chr8_4:3902803-3902822 | Msa1307870:intron | 20.0% |
| !! | AAGAGATTGAAGATAAAAAT+GGG | + | chr8_4:3902951-3902970 | None:intergenic | 20.0% |
| !! | TAAGAGATTGAAGATAAAAA+TGG | + | chr8_4:3902952-3902971 | None:intergenic | 20.0% |
| !!! | ATTTTTATCTTCAATCTCTT+AGG | - | chr8_4:3902951-3902970 | Msa1307870:intron | 20.0% |
| !!! | ACATTCAACTTTTTTTAGAA+AGG | - | chr8_4:3903267-3903286 | Msa1307870:CDS | 20.0% |
| !!! | ATACAAATATGCTGATTAAT+TGG | - | chr8_4:3903359-3903378 | Msa1307870:CDS | 20.0% |
| !!! | TACAAATATGCTGATTAATT+GGG | - | chr8_4:3903360-3903379 | Msa1307870:CDS | 20.0% |
| !! | ATAGAAGAAACACATATAAT+AGG | + | chr8_4:3903450-3903469 | None:intergenic | 20.0% |
| !! | AAAATTACTAGTACATCAAT+AGG | + | chr8_4:3903753-3903772 | None:intergenic | 20.0% |
| !!! | CAATTGACAATTTTATACAA+AGG | + | chr8_4:3903889-3903908 | None:intergenic | 20.0% |
| !! | TGTATAAAATTGTCAATTGT+AGG | - | chr8_4:3903890-3903909 | Msa1307870:five_prime_UTR | 20.0% |
| !! | GTATAAAATTGTCAATTGTA+GGG | - | chr8_4:3903891-3903910 | Msa1307870:five_prime_UTR | 20.0% |
| ! | TTAGTCAATCTCGATAATTA+GGG | + | chr8_4:3895722-3895741 | None:intergenic | 25.0% |
| ! | ATTAGTCAATCTCGATAATT+AGG | + | chr8_4:3895723-3895742 | None:intergenic | 25.0% |
| !! | ATGTTTTCATCAATCTTATG+CGG | + | chr8_4:3896095-3896114 | None:intergenic | 25.0% |
| ! | ATAAGATTGATGAAAACATG+TGG | - | chr8_4:3896096-3896115 | Msa1307870:CDS | 25.0% |
| ! | AAGAGAATGAAAATGGAAAA+TGG | + | chr8_4:3896201-3896220 | None:intergenic | 25.0% |
| ! | TCTGTTAAAGAGAATGAAAA+TGG | + | chr8_4:3896208-3896227 | None:intergenic | 25.0% |
| !! | ATTCAATTTTCCGTTATTCT+TGG | - | chr8_4:3896302-3896321 | Msa1307870:intron | 25.0% |
| !! | TTCAATTTTCCGTTATTCTT+GGG | - | chr8_4:3896303-3896322 | Msa1307870:intron | 25.0% |
| ! | CAAATTCAATATTGTTCAAG+AGG | + | chr8_4:3896810-3896829 | None:intergenic | 25.0% |
| ! | AATGATTTCTTCTATTTGTG+TGG | - | chr8_4:3896872-3896891 | Msa1307870:CDS | 25.0% |
| !! | TAATGGAGTTTTCATCTATT+AGG | + | chr8_4:3896899-3896918 | None:intergenic | 25.0% |
| ! | TACAACTAGTTACATACTAA+TGG | + | chr8_4:3896916-3896935 | None:intergenic | 25.0% |
| ! | ATTAGTATGTAACTAGTTGT+AGG | - | chr8_4:3896915-3896934 | Msa1307870:CDS | 25.0% |
| ! | TTAGTATGTAACTAGTTGTA+GGG | - | chr8_4:3896916-3896935 | Msa1307870:CDS | 25.0% |
| !!! | GTCATAGTAGTTTTAAAATC+AGG | - | chr8_4:3897080-3897099 | Msa1307870:CDS | 25.0% |
| ! | AACAAAACTAAATTAGTTGC+AGG | - | chr8_4:3897222-3897241 | Msa1307870:intron | 25.0% |
| ! | GAATGCAATATTTGAATAAC+AGG | - | chr8_4:3897254-3897273 | Msa1307870:intron | 25.0% |
| ! | CAGACTAAGTTTATATTACA+AGG | + | chr8_4:3897297-3897316 | None:intergenic | 25.0% |
| ! | GAAAAAATGAGGTCAAAAAT+AGG | + | chr8_4:3897381-3897400 | None:intergenic | 25.0% |
| ! | CTAAACATGAATGCAAAAAA+TGG | + | chr8_4:3897439-3897458 | None:intergenic | 25.0% |
| !!! | CATTTTTTGCATTCATGTTT+AGG | - | chr8_4:3897437-3897456 | Msa1307870:CDS | 25.0% |
| !! | TAGAATTTTCAGACAAAAGA+TGG | - | chr8_4:3897488-3897507 | Msa1307870:intron | 25.0% |
| !! | CAGCTCAAAATTTGATTTAT+AGG | + | chr8_4:3897571-3897590 | None:intergenic | 25.0% |
| !!! | ATTGCAAATTTTGAAACTTG+TGG | + | chr8_4:3897686-3897705 | None:intergenic | 25.0% |
| ! | TAACCATGCAAACAAAATTA+TGG | + | chr8_4:3897750-3897769 | None:intergenic | 25.0% |
| !!! | ATTCATAATTAATTTGTCCC+TGG | + | chr8_4:3897818-3897837 | None:intergenic | 25.0% |
| ! | TAGTTATTGCAAGAATTTAC+AGG | + | chr8_4:3897875-3897894 | None:intergenic | 25.0% |
| ! | ATTATGTAGATAATGCATCT+AGG | - | chr8_4:3898064-3898083 | Msa1307870:intron | 25.0% |
| !! | ATGATAATGAAAGGAAGAAT+CGG | + | chr8_4:3898646-3898665 | None:intergenic | 25.0% |
| ! | ATTCTTCCTTTCATTATCAT+GGG | - | chr8_4:3898646-3898665 | Msa1307870:intron | 25.0% |
| !! | TATTCAAATGAACGGTTTTA+GGG | + | chr8_4:3898904-3898923 | None:intergenic | 25.0% |
| !! | TTATTCAAATGAACGGTTTT+AGG | + | chr8_4:3898905-3898924 | None:intergenic | 25.0% |
| ! | AACTGTGATTGAAATGTTAA+TGG | + | chr8_4:3899044-3899063 | None:intergenic | 25.0% |
| !! | TACTTTTCCAAAAAAAGTGA+AGG | + | chr8_4:3899401-3899420 | None:intergenic | 25.0% |
| !! | ATCTTCTCCTTGTATATTTT+TGG | - | chr8_4:3899517-3899536 | Msa1307870:intron | 25.0% |
| ! | GATCAATTATAATAGACGTA+CGG | - | chr8_4:3899766-3899785 | Msa1307870:intron | 25.0% |
| ! | CTCAACATATTCACTAATAA+TGG | + | chr8_4:3899877-3899896 | None:intergenic | 25.0% |
| ! | TTCAGGATAAGTTATGTTTA+TGG | - | chr8_4:3899975-3899994 | Msa1307870:intron | 25.0% |
| !! | GTTTATGGTTAGAAGATTTT+AGG | - | chr8_4:3899990-3900009 | Msa1307870:intron | 25.0% |
| !! | TTATGGTTAGAAGATTTTAG+GGG | - | chr8_4:3899992-3900011 | Msa1307870:intron | 25.0% |
| !!! | GCATATTAATTTGTCAGAAA+AGG | - | chr8_4:3900304-3900323 | Msa1307870:intron | 25.0% |
| ! | GAAATAGATGATATTAAGAG+GGG | - | chr8_4:3901230-3901249 | Msa1307870:intron | 25.0% |
| ! | GAACTAAAAAATTGTATTGG+AGG | - | chr8_4:3901306-3901325 | Msa1307870:intron | 25.0% |
| ! | TAAAAAATTGTATTGGAGGA+GGG | - | chr8_4:3901310-3901329 | Msa1307870:intron | 25.0% |
| ! | TATCATATTATAGAAAGTCG+TGG | - | chr8_4:3901858-3901877 | Msa1307870:intron | 25.0% |
| ! | AAAAGGATGAATTTGAATAG+TGG | + | chr8_4:3902295-3902314 | None:intergenic | 25.0% |
| !! | TATTCAAATTCATCCTTTTC+AGG | - | chr8_4:3902296-3902315 | Msa1307870:intron | 25.0% |
| ! | TCTAGATTATGCATACAATA+AGG | + | chr8_4:3902489-3902508 | None:intergenic | 25.0% |
| ! | TATGATGATCTTTGAATATC+AGG | - | chr8_4:3902621-3902640 | Msa1307870:intron | 25.0% |
| ! | TTAGTATAGAAGGATATCTT+AGG | + | chr8_4:3902776-3902795 | None:intergenic | 25.0% |
| ! | TTAGGATATTGGATTTAGTT+TGG | - | chr8_4:3902814-3902833 | Msa1307870:intron | 25.0% |
| ! | TTCCTTATTGTACTCTAATT+TGG | - | chr8_4:3902885-3902904 | Msa1307870:intron | 25.0% |
| ! | AACCAAATTAGAGTACAATA+AGG | + | chr8_4:3902890-3902909 | None:intergenic | 25.0% |
| ! | AAAAATGGCAAAACAAACAT+GGG | + | chr8_4:3903035-3903054 | None:intergenic | 25.0% |
| ! | AAAAAATGGCAAAACAAACA+TGG | + | chr8_4:3903036-3903055 | None:intergenic | 25.0% |
| !!! | TTTGCCATTTTTTATTCTCA+TGG | - | chr8_4:3903043-3903062 | Msa1307870:intron | 25.0% |
| !! | TTTCTTCTATTGTTACGTTT+TGG | - | chr8_4:3903460-3903479 | Msa1307870:CDS | 25.0% |
| ! | TGTTATTGTATAATGACTGT+AGG | - | chr8_4:3903628-3903647 | Msa1307870:CDS | 25.0% |
| !! | TGTTCAATTGATTTCTATGA+AGG | - | chr8_4:3903823-3903842 | Msa1307870:CDS | 25.0% |
| !! | AATTGATTTCTATGAAGGAA+GGG | - | chr8_4:3903828-3903847 | Msa1307870:CDS | 25.0% |
| !!! | AATTGTAGGGTTTTATATTG+TGG | - | chr8_4:3903904-3903923 | Msa1307870:five_prime_UTR | 25.0% |
| !!! | TTTTTTACCATTACAACAGT+TGG | + | chr8_4:3903940-3903959 | None:intergenic | 25.0% |
| TAGTCAATCTCGATAATTAG+GGG | + | chr8_4:3895721-3895740 | None:intergenic | 30.0% | |
| ATGAAAATGGAAAATGGATC+TGG | + | chr8_4:3896195-3896214 | None:intergenic | 30.0% | |
| AAATTGAATATTGTCAGGTG+TGG | + | chr8_4:3896291-3896310 | None:intergenic | 30.0% | |
| ACGGAAAATTGAATATTGTC+AGG | + | chr8_4:3896296-3896315 | None:intergenic | 30.0% | |
| !! | CATGATCAGCATTTTTGATT+TGG | + | chr8_4:3896376-3896395 | None:intergenic | 30.0% |
| !! | ATCTAATGAAGAATGGATTG+TGG | + | chr8_4:3896768-3896787 | None:intergenic | 30.0% |
| AACTTTACCATCTCAAAATC+CGG | - | chr8_4:3896965-3896984 | Msa1307870:intron | 30.0% | |
| GGATATCATTAATGAGAAGT+GGG | + | chr8_4:3897171-3897190 | None:intergenic | 30.0% | |
| TTCAGATATTGCATTCTTCA+GGG | + | chr8_4:3897350-3897369 | None:intergenic | 30.0% | |
| TATGTCTACAGGAAAAAATG+AGG | + | chr8_4:3897392-3897411 | None:intergenic | 30.0% | |
| TTTCTAGACTTTATGTCTAC+AGG | + | chr8_4:3897403-3897422 | None:intergenic | 30.0% | |
| AAATTTGACCAGTGAGTATA+TGG | + | chr8_4:3897723-3897742 | None:intergenic | 30.0% | |
| !! | GTTCCATAATTTTGTTTGCA+TGG | - | chr8_4:3897744-3897763 | Msa1307870:intron | 30.0% |
| ! | AAACATGGAGTTTTTGTTGA+TGG | + | chr8_4:3897936-3897955 | None:intergenic | 30.0% |
| AATGATATTGCATCGAAACA+TGG | + | chr8_4:3897951-3897970 | None:intergenic | 30.0% | |
| ATTATGCAGATAATGCAACT+AGG | + | chr8_4:3898002-3898021 | None:intergenic | 30.0% | |
| ATTATCTGCATAATGCAACT+AGG | - | chr8_4:3898008-3898027 | Msa1307870:intron | 30.0% | |
| GCATTATCTACATAATGCAA+GGG | + | chr8_4:3898060-3898079 | None:intergenic | 30.0% | |
| TGCATTATCTACATAATGCA+AGG | + | chr8_4:3898061-3898080 | None:intergenic | 30.0% | |
| TACTATTCACACTGCAATTA+TGG | - | chr8_4:3898094-3898113 | Msa1307870:intron | 30.0% | |
| ! | GACTGTTCTATTTGAGTTAT+AGG | - | chr8_4:3898369-3898388 | Msa1307870:intron | 30.0% |
| !! | AGGTATTGCTTGATTTTACA+AGG | - | chr8_4:3898389-3898408 | Msa1307870:intron | 30.0% |
| GATTCTTCCTTTCATTATCA+TGG | - | chr8_4:3898645-3898664 | Msa1307870:intron | 30.0% | |
| ATTAAAATACCAAAGATGCG+AGG | + | chr8_4:3898702-3898721 | None:intergenic | 30.0% | |
| CAATTCAAAGATCACAGTTA+AGG | + | chr8_4:3898752-3898771 | None:intergenic | 30.0% | |
| !! | ATTCAAATGAACGGTTTTAG+GGG | + | chr8_4:3898903-3898922 | None:intergenic | 30.0% |
| AAACCGTTCATTTGAATAAC+TGG | - | chr8_4:3898906-3898925 | Msa1307870:intron | 30.0% | |
| AACCGTTCATTTGAATAACT+GGG | - | chr8_4:3898907-3898926 | Msa1307870:intron | 30.0% | |
| TACCCAGTTATTCAAATGAA+CGG | + | chr8_4:3898912-3898931 | None:intergenic | 30.0% | |
| AATAACTGGGTAAAAAGTTG+TGG | - | chr8_4:3898920-3898939 | Msa1307870:intron | 30.0% | |
| TATGGTTATGTTTAGATGGA+GGG | + | chr8_4:3899137-3899156 | None:intergenic | 30.0% | |
| TCCATCTAAACATAACCATA+GGG | - | chr8_4:3899137-3899156 | Msa1307870:intron | 30.0% | |
| ! | TACTTTTCCAAAAAAGGTGA+AGG | + | chr8_4:3899218-3899237 | None:intergenic | 30.0% |
| TATTAGGAATGGAAAGATAG+AGG | - | chr8_4:3899372-3899391 | Msa1307870:intron | 30.0% | |
| TGGAACTCCAAAAATATACA+AGG | + | chr8_4:3899527-3899546 | None:intergenic | 30.0% | |
| AAATAAAATCTTACGCACAG+TGG | - | chr8_4:3899578-3899597 | Msa1307870:intron | 30.0% | |
| AATAAAATCTTACGCACAGT+GGG | - | chr8_4:3899579-3899598 | Msa1307870:intron | 30.0% | |
| TTTCAATATAACGAGTAGCT+TGG | - | chr8_4:3899698-3899717 | Msa1307870:intron | 30.0% | |
| AACATCCACTACTAATTGAT+TGG | - | chr8_4:3899937-3899956 | Msa1307870:intron | 30.0% | |
| TAGTATCATAGAACTGATAG+AGG | - | chr8_4:3900020-3900039 | Msa1307870:intron | 30.0% | |
| AGTATCATAGAACTGATAGA+GGG | - | chr8_4:3900021-3900040 | Msa1307870:intron | 30.0% | |
| ! | GTTTGAATGTTACTTCATGA+TGG | - | chr8_4:3900122-3900141 | Msa1307870:intron | 30.0% |
| TCAATTATGAATTCCTCTAG+AGG | + | chr8_4:3900190-3900209 | None:intergenic | 30.0% | |
| TCTAGAGGAATTCATAATTG+AGG | - | chr8_4:3900189-3900208 | Msa1307870:intron | 30.0% | |
| CTAGAGGAATTCATAATTGA+GGG | - | chr8_4:3900190-3900209 | Msa1307870:intron | 30.0% | |
| !! | AATAATAATGCTCGAGTTGA+TGG | - | chr8_4:3900412-3900431 | Msa1307870:intron | 30.0% |
| ! | CAAAACAGTTGATTTCTATC+TGG | - | chr8_4:3900715-3900734 | Msa1307870:intron | 30.0% |
| ! | ACAAATTAGTTTCATCACCT+TGG | - | chr8_4:3900793-3900812 | Msa1307870:intron | 30.0% |
| CAGTTACTACAACTCAAATT+AGG | - | chr8_4:3900951-3900970 | Msa1307870:intron | 30.0% | |
| GGAGAAAATATTACCGATAT+TGG | - | chr8_4:3901098-3901117 | Msa1307870:CDS | 30.0% | |
| GAAAATATTACCGATATTGG+TGG | - | chr8_4:3901101-3901120 | Msa1307870:CDS | 30.0% | |
| ACGTGTTTATTAAGTCTCTT+AGG | - | chr8_4:3901144-3901163 | Msa1307870:CDS | 30.0% | |
| !!! | TTAGGTTTTGTTTGCAAGTT+TGG | - | chr8_4:3901162-3901181 | Msa1307870:CDS | 30.0% |
| AATACAAAACCCTCATCATT+TGG | - | chr8_4:3901282-3901301 | Msa1307870:intron | 30.0% | |
| ATACAAAACCCTCATCATTT+GGG | - | chr8_4:3901283-3901302 | Msa1307870:intron | 30.0% | |
| GGGGAACTAAAAAATTGTAT+TGG | - | chr8_4:3901303-3901322 | Msa1307870:intron | 30.0% | |
| CTAAAAAATTGTATTGGAGG+AGG | - | chr8_4:3901309-3901328 | Msa1307870:intron | 30.0% | |
| CAAATAATTCAACGGTAGAT+TGG | + | chr8_4:3901746-3901765 | None:intergenic | 30.0% | |
| CATTGCACCAATTCAAAATT+AGG | + | chr8_4:3901956-3901975 | None:intergenic | 30.0% | |
| !! | TATTTTGAACCTAGTGTGAA+CGG | - | chr8_4:3902080-3902099 | Msa1307870:intron | 30.0% |
| !! | TTGCTAGTAATTTTGATCAG+TGG | - | chr8_4:3902163-3902182 | Msa1307870:intron | 30.0% |
| !! | TGCTAGTAATTTTGATCAGT+GGG | - | chr8_4:3902164-3902183 | Msa1307870:intron | 30.0% |
| !!! | AATCGTCATTTTTCCTGAAA+AGG | + | chr8_4:3902312-3902331 | None:intergenic | 30.0% |
| !!! | ACTTTTGAGGTATATTGACA+AGG | - | chr8_4:3902361-3902380 | Msa1307870:intron | 30.0% |
| ! | TTGTATGCATAATCTAGAGT+TGG | - | chr8_4:3902491-3902510 | Msa1307870:intron | 30.0% |
| ATATCAGGTTATACTTTCAG+TGG | - | chr8_4:3902636-3902655 | Msa1307870:intron | 30.0% | |
| AGTAAACTCGTATATTGCAT+GGG | - | chr8_4:3902663-3902682 | Msa1307870:intron | 30.0% | |
| ! | TGGGATTTTTCTTTAGTACA+AGG | - | chr8_4:3902682-3902701 | Msa1307870:intron | 30.0% |
| AGTACAAGGCAAGATAAATA+TGG | - | chr8_4:3902696-3902715 | Msa1307870:intron | 30.0% | |
| !!! | TTTTTTTTGTGTGTGCGAAT+TGG | - | chr8_4:3902741-3902760 | Msa1307870:intron | 30.0% |
| AACAAAACATGATACAGAAC+TGG | + | chr8_4:3903005-3903024 | None:intergenic | 30.0% | |
| ACCACCATGAGAATAAAAAA+TGG | + | chr8_4:3903050-3903069 | None:intergenic | 30.0% | |
| TGGAAGCTATAAACTGATAT+GGG | - | chr8_4:3903237-3903256 | Msa1307870:CDS | 30.0% | |
| AATAGGAACATATGCTATGA+AGG | + | chr8_4:3903433-3903452 | None:intergenic | 30.0% | |
| ! | CAATTGATTTCTATGAAGGA+AGG | - | chr8_4:3903827-3903846 | Msa1307870:CDS | 30.0% |
| ! | AAAAGCCTTTTCGTATGAAA+TGG | - | chr8_4:3904063-3904082 | Msa1307870:intron | 30.0% |
| ! | AAAGCCTTTTCGTATGAAAT+GGG | - | chr8_4:3904064-3904083 | Msa1307870:intron | 30.0% |
| AAAGGAAGAGAATATTCGAG+AGG | - | chr8_4:3895783-3895802 | Msa1307870:three_prime_UTR | 35.0% | |
| AAGGAAGAGAATATTCGAGA+GGG | - | chr8_4:3895784-3895803 | Msa1307870:three_prime_UTR | 35.0% | |
| AAGAGAAGAGAAGAGAAGAA+AGG | - | chr8_4:3895839-3895858 | Msa1307870:three_prime_UTR | 35.0% | |
| AGAGAAGAGAAGAGAAGAAA+GGG | - | chr8_4:3895840-3895859 | Msa1307870:three_prime_UTR | 35.0% | |
| ATCATCAATTCCCAAATCAG+TGG | + | chr8_4:3896048-3896067 | None:intergenic | 35.0% | |
| ! | TTTTCATCAATCTTATGCGG+AGG | + | chr8_4:3896092-3896111 | None:intergenic | 35.0% |
| TTTGAGCTTCCCAAGAATAA+CGG | + | chr8_4:3896315-3896334 | None:intergenic | 35.0% | |
| GATTTGGAAAGATTCCAAAG+TGG | + | chr8_4:3896360-3896379 | None:intergenic | 35.0% | |
| ! | TATCTACCACAAGATTTTCG+AGG | - | chr8_4:3896416-3896435 | Msa1307870:intron | 35.0% |
| ! | TCTTCTCTGGAAACAACAAA+TGG | - | chr8_4:3896538-3896557 | Msa1307870:CDS | 35.0% |
| TCTGGAAACAACAAATGGAA+AGG | - | chr8_4:3896543-3896562 | Msa1307870:intron | 35.0% | |
| AACAACAAATGGAAAGGAGA+AGG | - | chr8_4:3896549-3896568 | Msa1307870:intron | 35.0% | |
| TTCCTGAGGTATGTATCTAT+GGG | - | chr8_4:3896636-3896655 | Msa1307870:intron | 35.0% | |
| AACTACTATGACGTCAAATG+TGG | + | chr8_4:3897072-3897091 | None:intergenic | 35.0% | |
| GGGATATCATTAATGAGAAG+TGG | + | chr8_4:3897172-3897191 | None:intergenic | 35.0% | |
| ! | ATTTAGTTTCAAGGCGCTAT+GGG | + | chr8_4:3897192-3897211 | None:intergenic | 35.0% |
| ! | TATTTAGTTTCAAGGCGCTA+TGG | + | chr8_4:3897193-3897212 | None:intergenic | 35.0% |
| AGCGCCTTGAAACTAAATAA+TGG | - | chr8_4:3897194-3897213 | Msa1307870:intron | 35.0% | |
| CTTCAGATATTGCATTCTTC+AGG | + | chr8_4:3897351-3897370 | None:intergenic | 35.0% | |
| TTTGAGCTGATTGTTTGTAG+AGG | - | chr8_4:3897582-3897601 | Msa1307870:intron | 35.0% | |
| CGAAATGCTATGAAACTTTG+CGG | + | chr8_4:3897633-3897652 | None:intergenic | 35.0% | |
| CCAGTGAGTATATGGTTATT+TGG | + | chr8_4:3897715-3897734 | None:intergenic | 35.0% | |
| CCAAATAACCATATACTCAC+TGG | - | chr8_4:3897712-3897731 | Msa1307870:intron | 35.0% | |
| AGCTATACTATGTAGGAACA+TGG | + | chr8_4:3897977-3897996 | None:intergenic | 35.0% | |
| CAACTAGGATATCTGTACTA+TGG | - | chr8_4:3898023-3898042 | Msa1307870:intron | 35.0% | |
| TACATAATGCAAGGGTTTGA+GGG | + | chr8_4:3898052-3898071 | None:intergenic | 35.0% | |
| ! | ACTGTTTTGTCTTCTAGTAC+TGG | - | chr8_4:3898312-3898331 | Msa1307870:intron | 35.0% |
| TGTGTGTGAATAACAATCAC+AGG | - | chr8_4:3898530-3898549 | Msa1307870:intron | 35.0% | |
| ACAGGATAACTCTTATCTAC+TGG | - | chr8_4:3898548-3898567 | Msa1307870:intron | 35.0% | |
| GATAACTCTTATCTACTGGT+AGG | - | chr8_4:3898552-3898571 | Msa1307870:intron | 35.0% | |
| !!! | TTCAAATGAACGGTTTTAGG+GGG | + | chr8_4:3898902-3898921 | None:intergenic | 35.0% |
| TTATGTTTAGATGGAGGGTT+TGG | + | chr8_4:3899132-3899151 | None:intergenic | 35.0% | |
| CTATGGTTATGTTTAGATGG+AGG | + | chr8_4:3899138-3899157 | None:intergenic | 35.0% | |
| CTCCATCTAAACATAACCAT+AGG | - | chr8_4:3899136-3899155 | Msa1307870:intron | 35.0% | |
| TCCCTATGGTTATGTTTAGA+TGG | + | chr8_4:3899141-3899160 | None:intergenic | 35.0% | |
| ATCTAAACATAACCATAGGG+AGG | - | chr8_4:3899140-3899159 | Msa1307870:intron | 35.0% | |
| TCTAAACATAACCATAGGGA+GGG | - | chr8_4:3899141-3899160 | Msa1307870:intron | 35.0% | |
| TTATTAGGGAATGGGATGAA+TGG | - | chr8_4:3899178-3899197 | Msa1307870:intron | 35.0% | |
| TCAAAATCTTCTCCCTGTAT+AGG | - | chr8_4:3899329-3899348 | Msa1307870:intron | 35.0% | |
| CAAAATCTTCTCCCTGTATA+GGG | - | chr8_4:3899330-3899349 | Msa1307870:intron | 35.0% | |
| !!! | GAGGTATCCTTCACTTTTTT+TGG | - | chr8_4:3899391-3899410 | Msa1307870:CDS | 35.0% |
| ATAAAATCTTACGCACAGTG+GGG | - | chr8_4:3899580-3899599 | Msa1307870:intron | 35.0% | |
| AAACCAAATAGTTACCCCAA+TGG | + | chr8_4:3899824-3899843 | None:intergenic | 35.0% | |
| ATTGGGGTAACTATTTGGTT+TGG | - | chr8_4:3899823-3899842 | Msa1307870:intron | 35.0% | |
| ! | TTGGGGTAACTATTTGGTTT+GGG | - | chr8_4:3899824-3899843 | Msa1307870:intron | 35.0% |
| GGATGTTACATTCAACTAGT+TGG | + | chr8_4:3899924-3899943 | None:intergenic | 35.0% | |
| CGAATCCAATCAATTAGTAG+TGG | + | chr8_4:3899945-3899964 | None:intergenic | 35.0% | |
| CATGAAGTAACATTCAAACG+CGG | + | chr8_4:3900121-3900140 | None:intergenic | 35.0% | |
| GTTTGATTCTATAGCAGTTG+TGG | - | chr8_4:3900222-3900241 | Msa1307870:intron | 35.0% | |
| AGAGGTTCATCACATTTCTT+AGG | - | chr8_4:3900380-3900399 | Msa1307870:intron | 35.0% | |
| AAGTAATATCAAGCGCAGTT+TGG | - | chr8_4:3900765-3900784 | Msa1307870:intron | 35.0% | |
| !! | CATCTCCTAATTTGAGTTGT+TGG | - | chr8_4:3900816-3900835 | Msa1307870:intron | 35.0% |
| TTGGCGGTAATTTGATCAAA+TGG | - | chr8_4:3900835-3900854 | Msa1307870:intron | 35.0% | |
| TGACAATTTGTGAACTGACA+TGG | - | chr8_4:3900922-3900941 | Msa1307870:intron | 35.0% | |
| ACTCAAATTAGGAGATGTCA+AGG | - | chr8_4:3900962-3900981 | Msa1307870:intron | 35.0% | |
| GTTGAAAGCAATATGTAGCT+TGG | + | chr8_4:3901010-3901029 | None:intergenic | 35.0% | |
| GAACTTTATCTCTCACAAAG+TGG | + | chr8_4:3901073-3901092 | None:intergenic | 35.0% | |
| GTGAGAGATAAAGTTCTTTC+AGG | - | chr8_4:3901077-3901096 | Msa1307870:intron | 35.0% | |
| !!! | GTTTTGTTTGCAAGTTTGGT+GGG | - | chr8_4:3901166-3901185 | Msa1307870:CDS | 35.0% |
| !! | TTTTGTTTGCAAGTTTGGTG+GGG | - | chr8_4:3901167-3901186 | Msa1307870:CDS | 35.0% |
| TAGATGATATTAAGAGGGGA+AGG | - | chr8_4:3901234-3901253 | Msa1307870:intron | 35.0% | |
| TACAAAACCCTCATCATTTG+GGG | - | chr8_4:3901284-3901303 | Msa1307870:intron | 35.0% | |
| ! | TTTAGTTCCCCAAATGATGA+GGG | + | chr8_4:3901294-3901313 | None:intergenic | 35.0% |
| !!! | TTTTAGTTCCCCAAATGATG+AGG | + | chr8_4:3901295-3901314 | None:intergenic | 35.0% |
| GGGGAAAATATAGGGAAAAT+TGG | + | chr8_4:3901477-3901496 | None:intergenic | 35.0% | |
| CAGCTTATGGGGAAAATATA+GGG | + | chr8_4:3901485-3901504 | None:intergenic | 35.0% | |
| TAATGTAAGATCCAATGGTC+AGG | - | chr8_4:3901561-3901580 | Msa1307870:intron | 35.0% | |
| AAAGAGTAAATCCTGACCAT+TGG | + | chr8_4:3901575-3901594 | None:intergenic | 35.0% | |
| ! | AGTTGATATGCACTTTGTGT+GGG | + | chr8_4:3901630-3901649 | None:intergenic | 35.0% |
| TAATCCTCTTCTCTCATTTC+AGG | + | chr8_4:3901656-3901675 | None:intergenic | 35.0% | |
| AGAGAAGAGGATTAACTGTA+TGG | - | chr8_4:3901662-3901681 | Msa1307870:intron | 35.0% | |
| ATGGTCAGATTAACTCTTCA+TGG | - | chr8_4:3901681-3901700 | Msa1307870:intron | 35.0% | |
| !! | GCTAGTAATTTTGATCAGTG+GGG | - | chr8_4:3902165-3902184 | Msa1307870:intron | 35.0% |
| ATCTGACTCAGATGTATTTG+TGG | - | chr8_4:3902549-3902568 | Msa1307870:intron | 35.0% | |
| CAGTAAACTCGTATATTGCA+TGG | - | chr8_4:3902662-3902681 | Msa1307870:intron | 35.0% | |
| ! | AGAACTTACAATCTTTTCCC+CGG | + | chr8_4:3902855-3902874 | None:intergenic | 35.0% |
| ATGAAGATTGATAAGGCTTC+TGG | + | chr8_4:3902926-3902945 | None:intergenic | 35.0% | |
| CATGATACAGAACTGGATAA+CGG | + | chr8_4:3902998-3903017 | None:intergenic | 35.0% | |
| !!! | GCCATTTTTTATTCTCATGG+TGG | - | chr8_4:3903046-3903065 | Msa1307870:intron | 35.0% |
| TTATTCTCATGGTGGTTGAT+TGG | - | chr8_4:3903054-3903073 | Msa1307870:intron | 35.0% | |
| ACAAACATGACAGACTAACT+TGG | + | chr8_4:3903121-3903140 | None:intergenic | 35.0% | |
| AATTTCTGCACATTAATGGC+TGG | - | chr8_4:3903217-3903236 | Msa1307870:CDS | 35.0% | |
| CTGGAAGCTATAAACTGATA+TGG | - | chr8_4:3903236-3903255 | Msa1307870:CDS | 35.0% | |
| TATTCAGTAATCAGTCCAAG+CGG | + | chr8_4:3903342-3903361 | None:intergenic | 35.0% | |
| TCTCATTTGAAGGGTTAACT+TGG | + | chr8_4:3903509-3903528 | None:intergenic | 35.0% | |
| AAGTTAACCCTTCAAATGAG+AGG | - | chr8_4:3903508-3903527 | Msa1307870:intron | 35.0% | |
| TTCCCATTTGCATAGATCAT+TGG | - | chr8_4:3903555-3903574 | Msa1307870:intron | 35.0% | |
| TATAATGACTGTAGGTGCTA+CGG | - | chr8_4:3903636-3903655 | Msa1307870:CDS | 35.0% | |
| ! | ACATTTTTGCATCAGTCGAA+TGG | + | chr8_4:3903701-3903720 | None:intergenic | 35.0% |
| TGATGCAAAAATGTCGTAGA+AGG | - | chr8_4:3903707-3903726 | Msa1307870:CDS | 35.0% | |
| GGCATGAGTAATTAGAACTT+CGG | + | chr8_4:3903791-3903810 | None:intergenic | 35.0% | |
| AATTGAACACATCTCGATCT+TGG | + | chr8_4:3903812-3903831 | None:intergenic | 35.0% | |
| ATTTCTATGAAGGAAGGGAT+AGG | - | chr8_4:3903833-3903852 | Msa1307870:CDS | 35.0% | |
| GTTCTTCATCAAGCAATATC+AGG | + | chr8_4:3903969-3903988 | None:intergenic | 35.0% | |
| GATATTGCTTGATGAAGAAC+AGG | - | chr8_4:3903969-3903988 | Msa1307870:five_prime_UTR | 35.0% | |
| TGATGAAGAACAGGATAGTA+AGG | - | chr8_4:3903978-3903997 | Msa1307870:five_prime_UTR | 35.0% | |
| GGATAGTAAGGATAGTAAGA+AGG | - | chr8_4:3903990-3904009 | Msa1307870:five_prime_UTR | 35.0% | |
| CAAAGAAAGATCACGAAGAA+TGG | + | chr8_4:3904030-3904049 | None:intergenic | 35.0% | |
| ! | AAGCCTTTTCGTATGAAATG+GGG | - | chr8_4:3904065-3904084 | Msa1307870:intron | 35.0% |
| TTACCCCATTTCATACGAAA+AGG | + | chr8_4:3904071-3904090 | None:intergenic | 35.0% | |
| CTAATAACTGAGCATGAGCA+TGG | - | chr8_4:3895738-3895757 | Msa1307870:three_prime_UTR | 40.0% | |
| AGAGAAGAGAAGAAAGGGAA+AGG | - | chr8_4:3895845-3895864 | Msa1307870:three_prime_UTR | 40.0% | |
| AAGAGAAGAAAGGGAAAGGT+GGG | - | chr8_4:3895849-3895868 | Msa1307870:three_prime_UTR | 40.0% | |
| TAGTACGAAGCAGAGAAGTA+AGG | + | chr8_4:3896022-3896041 | None:intergenic | 40.0% | |
| ! | TCGTACTATGACCACTGATT+TGG | - | chr8_4:3896034-3896053 | Msa1307870:three_prime_UTR | 40.0% |
| !! | CGTACTATGACCACTGATTT+GGG | - | chr8_4:3896035-3896054 | Msa1307870:three_prime_UTR | 40.0% |
| ATCAATCTTATGCGGAGGTT+GGG | + | chr8_4:3896087-3896106 | None:intergenic | 40.0% | |
| ACAATCTAATTGGCCAGACA+CGG | - | chr8_4:3896160-3896179 | Msa1307870:intron | 40.0% | |
| AGAGTTCCTCGAAAATCTTG+TGG | + | chr8_4:3896425-3896444 | None:intergenic | 40.0% | |
| GTGGATGCTTTGGTAAATTC+TGG | - | chr8_4:3896491-3896510 | Msa1307870:CDS | 40.0% | |
| ! | AGAGAAGAGCATATCGATCA+CGG | + | chr8_4:3896526-3896545 | None:intergenic | 40.0% |
| GTTCCTGAGGTATGTATCTA+TGG | - | chr8_4:3896635-3896654 | Msa1307870:intron | 40.0% | |
| AACCCATAGATACATACCTC+AGG | + | chr8_4:3896641-3896660 | None:intergenic | 40.0% | |
| TGGATTGTGGACAATGATGA+AGG | + | chr8_4:3896755-3896774 | None:intergenic | 40.0% | |
| CATCTCAAAATCCGGATGAA+CGG | - | chr8_4:3896973-3896992 | Msa1307870:intron | 40.0% | |
| TCAGGGCTATAATGTAGCTA+AGG | - | chr8_4:3897098-3897117 | Msa1307870:CDS | 40.0% | |
| AGTGGGATAAACAACTCCAT+AGG | + | chr8_4:3897154-3897173 | None:intergenic | 40.0% | |
| TTCGTGGGTGAAGATTCTTA+TGG | + | chr8_4:3897778-3897797 | None:intergenic | 40.0% | |
| !! | CATGGAGTTTTTGTTGATGG+AGG | + | chr8_4:3897933-3897952 | None:intergenic | 40.0% |
| ! | CTAGGCTAGCTATACTATGT+AGG | + | chr8_4:3897984-3898003 | None:intergenic | 40.0% |
| CTACATAATGCAAGGGTTTG+AGG | + | chr8_4:3898053-3898072 | None:intergenic | 40.0% | |
| AGGCAGATTAATGACGATGA+CGG | - | chr8_4:3898409-3898428 | Msa1307870:intron | 40.0% | |
| ATTGAGGTGAGGCTGTATAA+TGG | + | chr8_4:3898611-3898630 | None:intergenic | 40.0% | |
| CAGAAAGAATCATTGAGGTG+AGG | + | chr8_4:3898622-3898641 | None:intergenic | 40.0% | |
| TCGGACAGAAAGAATCATTG+AGG | + | chr8_4:3898627-3898646 | None:intergenic | 40.0% | |
| ! | ATCGTGCCCATGATAATGAA+AGG | + | chr8_4:3898655-3898674 | None:intergenic | 40.0% |
| ! | GTGAAGAGCAAGTTTTCTGT+TGG | - | chr8_4:3898798-3898817 | Msa1307870:intron | 40.0% |
| ! | ATTTGAAGTAGATGGCATGC+TGG | + | chr8_4:3898877-3898896 | None:intergenic | 40.0% |
| TGGGTAAAAAGTTGTGGAAC+CGG | - | chr8_4:3898926-3898945 | Msa1307870:intron | 40.0% | |
| AGAAAAATAAGCCCTCCCTA+TGG | + | chr8_4:3899155-3899174 | None:intergenic | 40.0% | |
| TGGGATGAATGGAAAGATAG+AGG | - | chr8_4:3899189-3899208 | Msa1307870:intron | 40.0% | |
| !!! | GAGGTATCCTTCACCTTTTT+TGG | - | chr8_4:3899208-3899227 | Msa1307870:intron | 40.0% |
| AAATAAGCCCTCCCTATACA+GGG | + | chr8_4:3899344-3899363 | None:intergenic | 40.0% | |
| AAAATAAGCCCTCCCTATAC+AGG | + | chr8_4:3899345-3899364 | None:intergenic | 40.0% | |
| ATTAAACCCCTCTCATATGG+TGG | + | chr8_4:3899547-3899566 | None:intergenic | 40.0% | |
| TGGATTAAACCCCTCTCATA+TGG | + | chr8_4:3899550-3899569 | None:intergenic | 40.0% | |
| TAAAATCTTACGCACAGTGG+GGG | - | chr8_4:3899581-3899600 | Msa1307870:intron | 40.0% | |
| GACAAAGGAAGGAGTGAAAA+GGG | + | chr8_4:3899622-3899641 | None:intergenic | 40.0% | |
| !!! | AGTGTTTTGAGGACAAAGGA+AGG | + | chr8_4:3899633-3899652 | None:intergenic | 40.0% |
| CTACTTCTGCAAATGCCATT+GGG | - | chr8_4:3899806-3899825 | Msa1307870:intron | 40.0% | |
| TACTTCTGCAAATGCCATTG+GGG | - | chr8_4:3899807-3899826 | Msa1307870:intron | 40.0% | |
| ATGCCATTGGGGTAACTATT+TGG | - | chr8_4:3899818-3899837 | Msa1307870:intron | 40.0% | |
| GGGCTATAATTGTCTTTGCA+TGG | - | chr8_4:3899844-3899863 | Msa1307870:intron | 40.0% | |
| ATCATAGAACTGATAGAGGG+AGG | - | chr8_4:3900024-3900043 | Msa1307870:intron | 40.0% | |
| TCATAGAACTGATAGAGGGA+GGG | - | chr8_4:3900025-3900044 | Msa1307870:intron | 40.0% | |
| ACTTCATGATGGTACAGAAC+TGG | - | chr8_4:3900133-3900152 | Msa1307870:intron | 40.0% | |
| CTTCATGATGGTACAGAACT+GGG | - | chr8_4:3900134-3900153 | Msa1307870:intron | 40.0% | |
| AGCTGTTGATGTCTACACTA+TGG | - | chr8_4:3900351-3900370 | Msa1307870:intron | 40.0% | |
| TCTACACTATGGAGTTTGAG+AGG | - | chr8_4:3900362-3900381 | Msa1307870:intron | 40.0% | |
| ! | CAACTGTTTTGCGAGAGATA+AGG | + | chr8_4:3900706-3900725 | None:intergenic | 40.0% |
| ACTCAAATTAGGAGATGCCA+AGG | + | chr8_4:3900813-3900832 | None:intergenic | 40.0% | |
| !! | CTCCTAATTTGAGTTGTTGG+CGG | - | chr8_4:3900819-3900838 | Msa1307870:intron | 40.0% |
| TACCGCCAACAACTCAAATT+AGG | + | chr8_4:3900824-3900843 | None:intergenic | 40.0% | |
| !! | AGCAGAGTATTGTGCTATTG+TGG | - | chr8_4:3900899-3900918 | Msa1307870:intron | 40.0% |
| CTTTATCTCTCACAAAGTGG+CGG | + | chr8_4:3901070-3901089 | None:intergenic | 40.0% | |
| ATCATTGGAGCCACCAATAT+CGG | + | chr8_4:3901114-3901133 | None:intergenic | 40.0% | |
| CACGTCAACCATTAGATCAT+TGG | + | chr8_4:3901129-3901148 | None:intergenic | 40.0% | |
| !!! | GGTTTTGTTTGCAAGTTTGG+TGG | - | chr8_4:3901165-3901184 | Msa1307870:CDS | 40.0% |
| ATATTAAGAGGGGAAGGCTT+TGG | - | chr8_4:3901240-3901259 | Msa1307870:intron | 40.0% | |
| TATTAAGAGGGGAAGGCTTT+GGG | - | chr8_4:3901241-3901260 | Msa1307870:intron | 40.0% | |
| ! | ATTGTATTGGAGGAGGGTTT+TGG | - | chr8_4:3901316-3901335 | Msa1307870:intron | 40.0% |
| CCAGCTTATGGGGAAAATAT+AGG | + | chr8_4:3901486-3901505 | None:intergenic | 40.0% | |
| ! | CCTATATTTTCCCCATAAGC+TGG | - | chr8_4:3901483-3901502 | Msa1307870:intron | 40.0% |
| CTTGTTACAACCAGCTTATG+GGG | + | chr8_4:3901496-3901515 | None:intergenic | 40.0% | |
| ! | GCTTGTTACAACCAGCTTAT+GGG | + | chr8_4:3901497-3901516 | None:intergenic | 40.0% |
| !! | AGCTTGTTACAACCAGCTTA+TGG | + | chr8_4:3901498-3901517 | None:intergenic | 40.0% |
| TAAGCTGGTTGTAACAAGCT+TGG | - | chr8_4:3901498-3901517 | Msa1307870:intron | 40.0% | |
| ! | CAGTTGATATGCACTTTGTG+TGG | + | chr8_4:3901631-3901650 | None:intergenic | 40.0% |
| AACAGATTTCCGTTCACACT+AGG | + | chr8_4:3902092-3902111 | None:intergenic | 40.0% | |
| ACATCTGCTGGAATGAAGAA+AGG | + | chr8_4:3902205-3902224 | None:intergenic | 40.0% | |
| AAAGAGATAAGTGTTCCAGC+TGG | - | chr8_4:3902334-3902353 | Msa1307870:intron | 40.0% | |
| AAGAGATAAGTGTTCCAGCT+GGG | - | chr8_4:3902335-3902354 | Msa1307870:intron | 40.0% | |
| ATGGGCGATGAAGATTGATA+AGG | + | chr8_4:3902933-3902952 | None:intergenic | 40.0% | |
| !! | AACTGGATAACGGAGAAGAA+GGG | + | chr8_4:3902988-3903007 | None:intergenic | 40.0% |
| TAACTTGGTCAGACTCGTAT+CGG | + | chr8_4:3903106-3903125 | None:intergenic | 40.0% | |
| GCTTTACTAGACATCTGATG+TGG | - | chr8_4:3903153-3903172 | Msa1307870:CDS | 40.0% | |
| GGGGAATTTCTGCACATTAA+TGG | - | chr8_4:3903213-3903232 | Msa1307870:CDS | 40.0% | |
| AATTGTCTCATTATCCCGCT+TGG | - | chr8_4:3903324-3903343 | Msa1307870:CDS | 40.0% | |
| ATTCAGTAATCAGTCCAAGC+GGG | + | chr8_4:3903341-3903360 | None:intergenic | 40.0% | |
| AGGAACATATGCTATGAAGG+TGG | + | chr8_4:3903430-3903449 | None:intergenic | 40.0% | |
| ACCCTTCAAATGAGAGGAAA+AGG | - | chr8_4:3903514-3903533 | Msa1307870:intron | 40.0% | |
| ! | GCCTTTTCCTCTCATTTGAA+GGG | + | chr8_4:3903518-3903537 | None:intergenic | 40.0% |
| ! | TGCCTTTTCCTCTCATTTGA+AGG | + | chr8_4:3903519-3903538 | None:intergenic | 40.0% |
| GGCCAATGATCTATGCAAAT+GGG | + | chr8_4:3903560-3903579 | None:intergenic | 40.0% | |
| TGGCCAATGATCTATGCAAA+TGG | + | chr8_4:3903561-3903580 | None:intergenic | 40.0% | |
| TTTGCATAGATCATTGGCCA+TGG | - | chr8_4:3903561-3903580 | Msa1307870:intron | 40.0% | |
| TTTACAACATGCTGAGACCA+TGG | + | chr8_4:3903581-3903600 | None:intergenic | 40.0% | |
| !! | GGGTTTTATATTGTGGCTGT+AGG | - | chr8_4:3903911-3903930 | Msa1307870:five_prime_UTR | 40.0% |
| TAGGAAGCCAACTGTTGTAA+TGG | - | chr8_4:3903930-3903949 | Msa1307870:five_prime_UTR | 40.0% | |
| ATTCGAGAGGGATCGATGAA+TGG | - | chr8_4:3895796-3895815 | Msa1307870:three_prime_UTR | 45.0% | |
| TTCGAGAGGGATCGATGAAT+GGG | - | chr8_4:3895797-3895816 | Msa1307870:three_prime_UTR | 45.0% | |
| GAAGAGAAGAAAGGGAAAGG+TGG | - | chr8_4:3895848-3895867 | Msa1307870:three_prime_UTR | 45.0% | |
| GTTTGTCGTAGTAAGACGAC+AGG | + | chr8_4:3895962-3895981 | None:intergenic | 45.0% | |
| CATCAATCTTATGCGGAGGT+TGG | + | chr8_4:3896088-3896107 | None:intergenic | 45.0% | |
| CTGGATTACATTACCGTGTC+TGG | + | chr8_4:3896176-3896195 | None:intergenic | 45.0% | |
| TCATCGCACTTTGACCACTT+TGG | - | chr8_4:3896343-3896362 | Msa1307870:intron | 45.0% | |
| AGAGAGGAATAAGCAAGCAG+AGG | - | chr8_4:3896469-3896488 | Msa1307870:intron | 45.0% | |
| GTGATCGATATGCTCTTCTC+TGG | - | chr8_4:3896525-3896544 | Msa1307870:CDS | 45.0% | |
| AGAAGGCAATTAGCTCAGCT+AGG | - | chr8_4:3896566-3896585 | Msa1307870:intron | 45.0% | |
| ! | TCCAACAAGGTACTTGACGA+GGG | + | chr8_4:3896615-3896634 | None:intergenic | 45.0% |
| ATACCTCAGGAACTCCAACA+AGG | + | chr8_4:3896628-3896647 | None:intergenic | 45.0% | |
| !! | CGTTCATCCGGATTTTGAGA+TGG | + | chr8_4:3896975-3896994 | None:intergenic | 45.0% |
| ! | AGCTGGATTTTCCGTTCATC+CGG | + | chr8_4:3896987-3897006 | None:intergenic | 45.0% |
| TTGCGATTCATGTGCTTAGC+TGG | + | chr8_4:3897004-3897023 | None:intergenic | 45.0% | |
| ! | GTGGACTATGTGACGTCAAA+TGG | + | chr8_4:3897053-3897072 | None:intergenic | 45.0% |
| TCTCTTCATTCCTCCTTCCT+TGG | - | chr8_4:3898211-3898230 | Msa1307870:intron | 45.0% | |
| GGCAGATTAATGACGATGAC+GGG | - | chr8_4:3898410-3898429 | Msa1307870:intron | 45.0% | |
| TGTGAGTTACCTCGCATCTT+TGG | - | chr8_4:3898690-3898709 | Msa1307870:intron | 45.0% | |
| ! | AGGGGGCTATTTGAAGTAGA+TGG | + | chr8_4:3898885-3898904 | None:intergenic | 45.0% |
| CATTGGAACAAGTGAACTGC+CGG | + | chr8_4:3898958-3898977 | None:intergenic | 45.0% | |
| TTTGGAGGGAGAGATGGTAA+GGG | + | chr8_4:3899114-3899133 | None:intergenic | 45.0% | |
| GTTTAGATGGAGGGTTTGGA+GGG | + | chr8_4:3899128-3899147 | None:intergenic | 45.0% | |
| TGTTTAGATGGAGGGTTTGG+AGG | + | chr8_4:3899129-3899148 | None:intergenic | 45.0% | |
| AATCTTCTCCCTGTATAGGG+AGG | - | chr8_4:3899333-3899352 | Msa1307870:intron | 45.0% | |
| ATCTTCTCCCTGTATAGGGA+GGG | - | chr8_4:3899334-3899353 | Msa1307870:intron | 45.0% | |
| TTGGAGTTCCACCATATGAG+AGG | - | chr8_4:3899536-3899555 | Msa1307870:intron | 45.0% | |
| TGGAGTTCCACCATATGAGA+GGG | - | chr8_4:3899537-3899556 | Msa1307870:intron | 45.0% | |
| GGACAAAGGAAGGAGTGAAA+AGG | + | chr8_4:3899623-3899642 | None:intergenic | 45.0% | |
| TTTGTGACTCAGTTGGGACA+TGG | + | chr8_4:3899661-3899680 | None:intergenic | 45.0% | |
| TCCCAACTGAGTCACAAACA+CGG | - | chr8_4:3899663-3899682 | Msa1307870:intron | 45.0% | |
| CCAATGGCATTTGCAGAAGT+AGG | + | chr8_4:3899808-3899827 | None:intergenic | 45.0% | |
| CCTACTTCTGCAAATGCCAT+TGG | - | chr8_4:3899805-3899824 | Msa1307870:intron | 45.0% | |
| TTGATTGGATTCGAGCTGTC+AGG | - | chr8_4:3899952-3899971 | Msa1307870:intron | 45.0% | |
| TGGTGGCTCCAATGATCTAA+TGG | - | chr8_4:3901118-3901137 | Msa1307870:CDS | 45.0% | |
| ! | TTTGCAAGTTTGGTGGGGAA+GGG | - | chr8_4:3901172-3901191 | Msa1307870:CDS | 45.0% |
| ATTAAGAGGGGAAGGCTTTG+GGG | - | chr8_4:3901242-3901261 | Msa1307870:intron | 45.0% | |
| !!! | TATTGGAGGAGGGTTTTGGA+TGG | - | chr8_4:3901320-3901339 | Msa1307870:intron | 45.0% |
| TGAGCCTGAAATGAGAGAAG+AGG | - | chr8_4:3901649-3901668 | Msa1307870:intron | 45.0% | |
| TTCATTCCAGCAGATGTTGC+TGG | - | chr8_4:3902208-3902227 | Msa1307870:intron | 45.0% | |
| TTGCTGGTGCAGTGGAAATA+AGG | - | chr8_4:3902224-3902243 | Msa1307870:intron | 45.0% | |
| ! | TCCAGCTGGGAAAACTTTTG+AGG | - | chr8_4:3902348-3902367 | Msa1307870:intron | 45.0% |
| ! | ACCTCAAAAGTTTTCCCAGC+TGG | + | chr8_4:3902352-3902371 | None:intergenic | 45.0% |
| TGTCGCATGTTATGTGCAAC+AGG | + | chr8_4:3902458-3902477 | None:intergenic | 45.0% | |
| TTGGAGTTTGCAAGTCCTAC+CGG | - | chr8_4:3902833-3902852 | Msa1307870:intron | 45.0% | |
| ! | CTTACAATCTTTTCCCCGGT+AGG | + | chr8_4:3902851-3902870 | None:intergenic | 45.0% |
| !! | GAACTGGATAACGGAGAAGA+AGG | + | chr8_4:3902989-3903008 | None:intergenic | 45.0% |
| ! | ACTGTAGGTGCTACGGTATA+AGG | - | chr8_4:3903643-3903662 | Msa1307870:CDS | 45.0% |
| AGGTATCCTGCATAATGCAG+AGG | + | chr8_4:3903733-3903752 | None:intergenic | 45.0% | |
| TCTATGAAGGAAGGGATAGG+AGG | - | chr8_4:3903836-3903855 | Msa1307870:CDS | 45.0% | |
| ! | ATAGGAGGTGTAAAGGAGCT+GGG | - | chr8_4:3903851-3903870 | Msa1307870:exon | 45.0% |
| !!! | AATAACTTTTAATAAATAAT+TGG | - | chr8_4:3902006-3902025 | Msa1307870:intron | 5.0% |
| TCGAGAGGGATCGATGAATG+GGG | - | chr8_4:3895798-3895817 | Msa1307870:three_prime_UTR | 50.0% | |
| TCCTCTGATTCCGATTCCGA+TGG | - | chr8_4:3895896-3895915 | Msa1307870:three_prime_UTR | 50.0% | |
| GTAGAAGCAGCCATCGGAAT+CGG | + | chr8_4:3895909-3895928 | None:intergenic | 50.0% | |
| !! | AGGGTTTGGTGCCCATAACT+AGG | - | chr8_4:3895931-3895950 | Msa1307870:three_prime_UTR | 50.0% |
| !! | GGGTTTGGTGCCCATAACTA+GGG | - | chr8_4:3895932-3895951 | Msa1307870:three_prime_UTR | 50.0% |
| GACAGGAAGGCCCTAGTTAT+GGG | + | chr8_4:3895945-3895964 | None:intergenic | 50.0% | |
| GTCGTAGTAAGACGACAGGA+AGG | + | chr8_4:3895958-3895977 | None:intergenic | 50.0% | |
| GAGAAAGAGGAGGAGTGAAG+GGG | + | chr8_4:3895986-3896005 | None:intergenic | 50.0% | |
| GGAGAAAGAGGAGGAGTGAA+GGG | + | chr8_4:3895987-3896006 | None:intergenic | 50.0% | |
| TGGAGAAAGAGGAGGAGTGA+AGG | + | chr8_4:3895988-3896007 | None:intergenic | 50.0% | |
| TGAGAGACGTCTGGAGAAAG+AGG | + | chr8_4:3895999-3896018 | None:intergenic | 50.0% | |
| GAAGTAAGGTGAGAGACGTC+TGG | + | chr8_4:3896008-3896027 | None:intergenic | 50.0% | |
| GAGGAATAAGCAAGCAGAGG+TGG | - | chr8_4:3896472-3896491 | Msa1307870:intron | 50.0% | |
| ACCCTCGTCAAGTACCTTGT+TGG | - | chr8_4:3896611-3896630 | Msa1307870:intron | 50.0% | |
| ! | CTCCAACAAGGTACTTGACG+AGG | + | chr8_4:3896616-3896635 | None:intergenic | 50.0% |
| GTACCTTGTTGGAGTTCCTG+AGG | - | chr8_4:3896622-3896641 | Msa1307870:intron | 50.0% | |
| TATCAGCCTGCAGCATGCAA+AGG | - | chr8_4:3897128-3897147 | Msa1307870:intron | 50.0% | |
| TCAACCTAACTCTGCTGCCA+AGG | + | chr8_4:3898231-3898250 | None:intergenic | 50.0% | |
| CTTATCTACTGGTAGGCCCA+TGG | - | chr8_4:3898559-3898578 | Msa1307870:intron | 50.0% | |
| GAGGTGAGGCTGTATAATGG+TGG | + | chr8_4:3898608-3898627 | None:intergenic | 50.0% | |
| GTTGTGGAACCGGACAAAAC+CGG | - | chr8_4:3898936-3898955 | Msa1307870:intron | 50.0% | |
| !!! | AGTGAACTGCCGGTTTTGTC+CGG | + | chr8_4:3898948-3898967 | None:intergenic | 50.0% |
| GTTTGGAGGGAGAGATGGTA+AGG | + | chr8_4:3899115-3899134 | None:intergenic | 50.0% | |
| GGAGTTCCACCATATGAGAG+GGG | - | chr8_4:3899538-3899557 | Msa1307870:intron | 50.0% | |
| !!! | GGGGAGTGTTTTGAGGACAA+AGG | + | chr8_4:3899637-3899656 | None:intergenic | 50.0% |
| !!! | ACATGGAGGGGAGTGTTTTG+AGG | + | chr8_4:3899644-3899663 | None:intergenic | 50.0% |
| TGACTCAGTTGGGACATGGA+GGG | + | chr8_4:3899657-3899676 | None:intergenic | 50.0% | |
| GCCGTGTTTGTGACTCAGTT+GGG | + | chr8_4:3899667-3899686 | None:intergenic | 50.0% | |
| GCACAAAGAGAGACGACAGA+GGG | + | chr8_4:3900286-3900305 | None:intergenic | 50.0% | |
| TGCACAAAGAGAGACGACAG+AGG | + | chr8_4:3900287-3900306 | None:intergenic | 50.0% | |
| AGGGGAACAGTTAGCTGTCT+TGG | - | chr8_4:3900324-3900343 | Msa1307870:intron | 50.0% | |
| ! | GTTTGCAAGTTTGGTGGGGA+AGG | - | chr8_4:3901171-3901190 | Msa1307870:CDS | 50.0% |
| GGGGAGGGGTTTGGAAAAAA+AGG | - | chr8_4:3901196-3901215 | Msa1307870:intron | 50.0% | |
| ! | TTAAGAGGGGAAGGCTTTGG+GGG | - | chr8_4:3901243-3901262 | Msa1307870:intron | 50.0% |
| TGGAGTTTGCAAGTCCTACC+GGG | - | chr8_4:3902834-3902853 | Msa1307870:intron | 50.0% | |
| TTGCATCAGTCGAATGGCAC+TGG | + | chr8_4:3903695-3903714 | None:intergenic | 50.0% | |
| AGAAGGCCTCTGCATTATGC+AGG | - | chr8_4:3903724-3903743 | Msa1307870:CDS | 50.0% | |
| ! | GGAAGGGATAGGAGGTGTAA+AGG | - | chr8_4:3903844-3903863 | Msa1307870:exon | 50.0% |
| ! | GATAGGAGGTGTAAAGGAGC+TGG | - | chr8_4:3903850-3903869 | Msa1307870:exon | 50.0% |
| GCCATCGGAATCGGAATCAG+AGG | + | chr8_4:3895900-3895919 | None:intergenic | 55.0% | |
| TCCGATGGCTGCTTCTACAG+AGG | - | chr8_4:3895911-3895930 | Msa1307870:three_prime_UTR | 55.0% | |
| CCCTCTGTAGAAGCAGCCAT+CGG | + | chr8_4:3895915-3895934 | None:intergenic | 55.0% | |
| CCGATGGCTGCTTCTACAGA+GGG | - | chr8_4:3895912-3895931 | Msa1307870:three_prime_UTR | 55.0% | |
| GGCTGCTTCTACAGAGGGTT+TGG | - | chr8_4:3895917-3895936 | Msa1307870:three_prime_UTR | 55.0% | |
| CGACAGGAAGGCCCTAGTTA+TGG | + | chr8_4:3895946-3895965 | None:intergenic | 55.0% | |
| GAGACGTCTGGAGAAAGAGG+AGG | + | chr8_4:3895996-3896015 | None:intergenic | 55.0% | |
| AGCGTTCGCGTTGTTGTCTG+AGG | + | chr8_4:3896448-3896467 | None:intergenic | 55.0% | |
| AACAACGCGAACGCTCAGAG+AGG | - | chr8_4:3896453-3896472 | Msa1307870:intron | 55.0% | |
| GCAAGCAGAGGTGGATGCTT+TGG | - | chr8_4:3896481-3896500 | Msa1307870:intron | 55.0% | |
| CATAGGCCTTTGCATGCTGC+AGG | + | chr8_4:3897137-3897156 | None:intergenic | 55.0% | |
| CTGCAGCATGCAAAGGCCTA+TGG | - | chr8_4:3897135-3897154 | Msa1307870:intron | 55.0% | |
| AACTCTGCTGCCAAGGAAGG+AGG | + | chr8_4:3898224-3898243 | None:intergenic | 55.0% | |
| CCTAACTCTGCTGCCAAGGA+AGG | + | chr8_4:3898227-3898246 | None:intergenic | 55.0% | |
| CCTTCCTTGGCAGCAGAGTT+AGG | - | chr8_4:3898224-3898243 | Msa1307870:intron | 55.0% | |
| ATCTACTGGTAGGCCCATGG+AGG | - | chr8_4:3898562-3898581 | Msa1307870:intron | 55.0% | |
| !! | GAGCTGGCTCGGTTTCGATT+TGG | + | chr8_4:3898841-3898860 | None:intergenic | 55.0% |
| !! | GTAGATGGCATGCTGGTTCC+TGG | + | chr8_4:3898870-3898889 | None:intergenic | 55.0% |
| AATCTTACGCACAGTGGGGG+TGG | - | chr8_4:3899584-3899603 | Msa1307870:intron | 55.0% | |
| ATCTTACGCACAGTGGGGGT+GGG | - | chr8_4:3899585-3899604 | Msa1307870:intron | 55.0% | |
| GACTCAGTTGGGACATGGAG+GGG | + | chr8_4:3899656-3899675 | None:intergenic | 55.0% | |
| GTGACTCAGTTGGGACATGG+AGG | + | chr8_4:3899658-3899677 | None:intergenic | 55.0% | |
| GGCCGTGTTTGTGACTCAGT+TGG | + | chr8_4:3899668-3899687 | None:intergenic | 55.0% | |
| TGAGTCACAAACACGGCCCA+AGG | - | chr8_4:3899670-3899689 | Msa1307870:intron | 55.0% | |
| GGATTCGAGCTGTCAGGTTC+AGG | - | chr8_4:3899958-3899977 | Msa1307870:intron | 55.0% | |
| AGGCTGTGAGCAGACACACA+GGG | + | chr8_4:3900170-3900189 | None:intergenic | 55.0% | |
| TGTCTGCTCACAGCCTCTAG+AGG | - | chr8_4:3900174-3900193 | Msa1307870:intron | 55.0% | |
| ! | CAAGTTTGGTGGGGAAGGGA+GGG | - | chr8_4:3901176-3901195 | Msa1307870:CDS | 55.0% |
| ! | AAGTTTGGTGGGGAAGGGAG+GGG | - | chr8_4:3901177-3901196 | Msa1307870:CDS | 55.0% |
| !! | TAAGAGGGGAAGGCTTTGGG+GGG | - | chr8_4:3901244-3901263 | Msa1307870:intron | 55.0% |
| ACTGCACCAGCAACATCTGC+TGG | + | chr8_4:3902217-3902236 | None:intergenic | 55.0% | |
| AGCAGATGTTGCTGGTGCAG+TGG | - | chr8_4:3902216-3902235 | Msa1307870:intron | 55.0% | |
| GGAGTTTGCAAGTCCTACCG+GGG | - | chr8_4:3902835-3902854 | Msa1307870:intron | 55.0% | |
| ! | TCAGACTCGTATCGGCGGTA+AGG | + | chr8_4:3903098-3903117 | None:intergenic | 55.0% |
| CTTGGTCAGACTCGTATCGG+CGG | + | chr8_4:3903103-3903122 | None:intergenic | 55.0% | |
| !! | AATGGCACTGGCTCTGCAAC+AGG | + | chr8_4:3903683-3903702 | None:intergenic | 55.0% |
| GCTCAGCTAGGCTCTGCAAC+AGG | - | chr8_4:3896578-3896597 | Msa1307870:intron | 60.0% | |
| CGATGACGCTGCTCCTCCAT+GGG | + | chr8_4:3898578-3898597 | None:intergenic | 60.0% | |
| GAGGAGCAGCGTCATCGCTA+TGG | - | chr8_4:3898581-3898600 | Msa1307870:intron | 60.0% | |
| TCGAAACCGAGCCAGCTCGT+TGG | - | chr8_4:3898843-3898862 | Msa1307870:intron | 60.0% | |
| TGGTTCCTGGTCCAACGAGC+TGG | + | chr8_4:3898857-3898876 | None:intergenic | 60.0% | |
| GGAGGGTTTGGAGGGAGAGA+TGG | + | chr8_4:3899120-3899139 | None:intergenic | 60.0% | |
| TCTTACGCACAGTGGGGGTG+GGG | - | chr8_4:3899586-3899605 | Msa1307870:intron | 60.0% | |
| GAGGCTGTGAGCAGACACAC+AGG | + | chr8_4:3900171-3900190 | None:intergenic | 60.0% | |
| ! | GCAAGTTTGGTGGGGAAGGG+AGG | - | chr8_4:3901175-3901194 | Msa1307870:CDS | 60.0% |
| GCGATGACGCTGCTCCTCCA+TGG | + | chr8_4:3898579-3898598 | None:intergenic | 65.0% | |
| CCTGGTCCAACGAGCTGGCT+CGG | + | chr8_4:3898852-3898871 | None:intergenic | 65.0% | |
| CTTACGCACAGTGGGGGTGG+GGG | - | chr8_4:3899587-3899606 | Msa1307870:intron | 65.0% | |
| TTACGCACAGTGGGGGTGGG+GGG | - | chr8_4:3899588-3899607 | Msa1307870:intron | 65.0% | |
| TTTGGTGGGGAAGGGAGGGG+AGG | - | chr8_4:3901180-3901199 | Msa1307870:CDS | 65.0% | |
| TTGGTGGGGAAGGGAGGGGA+GGG | - | chr8_4:3901181-3901200 | Msa1307870:CDS | 65.0% | |
| !! | GGCACTGGCTCTGCAACAGG+AGG | + | chr8_4:3903680-3903699 | None:intergenic | 65.0% |
| CCGAGCCAGCTCGTTGGACC+AGG | - | chr8_4:3898849-3898868 | Msa1307870:intron | 70.0% | |
| TACGCACAGTGGGGGTGGGG+GGG | - | chr8_4:3899589-3899608 | Msa1307870:intron | 70.0% | |
| TGGTGGGGAAGGGAGGGGAG+GGG | - | chr8_4:3901182-3901201 | Msa1307870:intron | 70.0% | |
| GGGAAGGGAGGGGAGGGGTT+TGG | - | chr8_4:3901187-3901206 | Msa1307870:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 3895659 | 3904115 | 3895659 | ID=Msa1307870;Name=Msa1307870 |
| chr8_4 | mRNA | 3895659 | 3904115 | 3895659 | ID=Msa1307870-mRNA-1;Parent=Msa1307870;Name=Msa1307870-mRNA-1;_AED=0.25;_eAED=0.25;_QI=215|0.91|0.92|1|0.91|0.84|13|406|476 |
| chr8_4 | exon | 3895659 | 3896124 | 3895659 | ID=Msa1307870-mRNA-1:exon:1151;Parent=Msa1307870-mRNA-1 |
| chr8_4 | exon | 3896486 | 3896560 | 3896486 | ID=Msa1307870-mRNA-1:exon:1150;Parent=Msa1307870-mRNA-1 |
| chr8_4 | exon | 3896653 | 3896688 | 3896653 | ID=Msa1307870-mRNA-1:exon:1149;Parent=Msa1307870-mRNA-1 |
| chr8_4 | exon | 3896765 | 3896956 | 3896765 | ID=Msa1307870-mRNA-1:exon:1148;Parent=Msa1307870-mRNA-1 |
| chr8_4 | exon | 3897057 | 3897131 | 3897057 | ID=Msa1307870-mRNA-1:exon:1147;Parent=Msa1307870-mRNA-1 |
| chr8_4 | exon | 3897405 | 3897456 | 3897405 | ID=Msa1307870-mRNA-1:exon:1146;Parent=Msa1307870-mRNA-1 |
| chr8_4 | exon | 3897529 | 3897591 | 3897529 | ID=Msa1307870-mRNA-1:exon:1145;Parent=Msa1307870-mRNA-1 |
| chr8_4 | exon | 3899373 | 3899453 | 3899373 | ID=Msa1307870-mRNA-1:exon:1144;Parent=Msa1307870-mRNA-1 |
| chr8_4 | exon | 3901084 | 3901200 | 3901084 | ID=Msa1307870-mRNA-1:exon:1143;Parent=Msa1307870-mRNA-1 |
| chr8_4 | exon | 3901343 | 3901383 | 3901343 | ID=Msa1307870-mRNA-1:exon:1142;Parent=Msa1307870-mRNA-1 |
| chr8_4 | exon | 3903131 | 3903502 | 3903131 | ID=Msa1307870-mRNA-1:exon:1141;Parent=Msa1307870-mRNA-1 |
| chr8_4 | exon | 3903593 | 3904029 | 3903593 | ID=Msa1307870-mRNA-1:exon:1140;Parent=Msa1307870-mRNA-1 |
| chr8_4 | exon | 3904071 | 3904115 | 3904071 | ID=Msa1307870-mRNA-1:exon:1139;Parent=Msa1307870-mRNA-1 |
| chr8_4 | five_prime_UTR | 3904071 | 3904115 | 3904071 | ID=Msa1307870-mRNA-1:five_prime_utr;Parent=Msa1307870-mRNA-1 |
| chr8_4 | five_prime_UTR | 3903860 | 3904029 | 3903860 | ID=Msa1307870-mRNA-1:five_prime_utr;Parent=Msa1307870-mRNA-1 |
| chr8_4 | CDS | 3903593 | 3903859 | 3903593 | ID=Msa1307870-mRNA-1:cds;Parent=Msa1307870-mRNA-1 |
| chr8_4 | CDS | 3903131 | 3903502 | 3903131 | ID=Msa1307870-mRNA-1:cds;Parent=Msa1307870-mRNA-1 |
| chr8_4 | CDS | 3901343 | 3901383 | 3901343 | ID=Msa1307870-mRNA-1:cds;Parent=Msa1307870-mRNA-1 |
| chr8_4 | CDS | 3901084 | 3901200 | 3901084 | ID=Msa1307870-mRNA-1:cds;Parent=Msa1307870-mRNA-1 |
| chr8_4 | CDS | 3899373 | 3899453 | 3899373 | ID=Msa1307870-mRNA-1:cds;Parent=Msa1307870-mRNA-1 |
| chr8_4 | CDS | 3897529 | 3897591 | 3897529 | ID=Msa1307870-mRNA-1:cds;Parent=Msa1307870-mRNA-1 |
| chr8_4 | CDS | 3897405 | 3897456 | 3897405 | ID=Msa1307870-mRNA-1:cds;Parent=Msa1307870-mRNA-1 |
| chr8_4 | CDS | 3897057 | 3897131 | 3897057 | ID=Msa1307870-mRNA-1:cds;Parent=Msa1307870-mRNA-1 |
| chr8_4 | CDS | 3896765 | 3896956 | 3896765 | ID=Msa1307870-mRNA-1:cds;Parent=Msa1307870-mRNA-1 |
| chr8_4 | CDS | 3896653 | 3896688 | 3896653 | ID=Msa1307870-mRNA-1:cds;Parent=Msa1307870-mRNA-1 |
| chr8_4 | CDS | 3896486 | 3896560 | 3896486 | ID=Msa1307870-mRNA-1:cds;Parent=Msa1307870-mRNA-1 |
| chr8_4 | CDS | 3896065 | 3896124 | 3896065 | ID=Msa1307870-mRNA-1:cds;Parent=Msa1307870-mRNA-1 |
| chr8_4 | three_prime_UTR | 3895659 | 3896064 | 3895659 | ID=Msa1307870-mRNA-1:three_prime_utr;Parent=Msa1307870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
