Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1336020 | GAU11331.1 | 62.692 | 520 | 106 | 4 | 1 | 460 | 1 | 492 | 0.0 | 615 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1336020 | sp|Q94K41|SDR3B_ARATH | 64.224 | 232 | 83 | 0 | 1 | 232 | 1 | 232 | 8.33e-103 | 310 |
| Msa1336020 | sp|Q94K41|SDR3B_ARATH | 55.336 | 253 | 85 | 2 | 232 | 459 | 6 | 255 | 6.53e-90 | 277 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1336020 | F6HZD8 | 54.580 | 262 | 91 | 2 | 232 | 468 | 6 | 264 | 2.31e-84 | 279 |
| Msa1336020 | F6HZD8 | 57.411 | 533 | 151 | 3 | 1 | 460 | 1 | 530 | 0.0 | 595 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006480 | Msa1336020 | 0.809890 | 1.512950e-50 | -8.615850e-47 |
| Msa0025570 | Msa1336020 | 0.824859 | 6.424210e-54 | -8.615850e-47 |
| Msa0039750 | Msa1336020 | 0.827551 | 1.470141e-54 | -8.615850e-47 |
| Msa0073110 | Msa1336020 | 0.816204 | 6.237985e-52 | -8.615850e-47 |
| Msa0101530 | Msa1336020 | 0.805783 | 1.130022e-49 | -8.615850e-47 |
| Msa0603310 | Msa1336020 | 0.823528 | 1.319636e-53 | -8.615850e-47 |
| Msa0628200 | Msa1336020 | 0.805162 | 1.524682e-49 | -8.615850e-47 |
| Msa0682110 | Msa1336020 | 0.801652 | 8.139712e-49 | -8.615850e-47 |
| Msa0682160 | Msa1336020 | 0.800804 | 1.213883e-48 | -8.615850e-47 |
| Msa0736560 | Msa1336020 | 0.804644 | 1.957012e-49 | -8.615850e-47 |
| Msa0736920 | Msa1336020 | 0.820985 | 5.135605e-53 | -8.615850e-47 |
| Msa0778570 | Msa1336020 | 0.818674 | 1.732551e-52 | -8.615850e-47 |
| Msa0802600 | Msa1336020 | 0.806597 | 7.613918e-50 | -8.615850e-47 |
| Msa0802760 | Msa1336020 | 0.814674 | 1.365753e-51 | -8.615850e-47 |
| Msa0815940 | Msa1336020 | 0.821098 | 4.836188e-53 | -8.615850e-47 |
| Msa0841050 | Msa1336020 | 0.813645 | 2.304390e-51 | -8.615850e-47 |
| Msa0121320 | Msa1336020 | 0.829401 | 5.256392e-55 | -8.615850e-47 |
| Msa0140870 | Msa1336020 | -0.800001 | 1.768607e-48 | -8.615850e-47 |
| Msa0143500 | Msa1336020 | 0.932119 | 1.371925e-94 | -8.615850e-47 |
| Msa0166180 | Msa1336020 | 0.832596 | 8.635993e-56 | -8.615850e-47 |
| Msa0185040 | Msa1336020 | 0.812811 | 3.514143e-51 | -8.615850e-47 |
| Msa0211460 | Msa1336020 | 0.800628 | 1.318343e-48 | -8.615850e-47 |
| Msa0234150 | Msa1336020 | 0.808580 | 2.887822e-50 | -8.615850e-47 |
| Msa1263110 | Msa1336020 | 0.804600 | 1.998834e-49 | -8.615850e-47 |
| Msa1269200 | Msa1336020 | 0.830349 | 3.087890e-55 | -8.615850e-47 |
| Msa1302630 | Msa1336020 | 0.800117 | 1.675234e-48 | -8.615850e-47 |
| Msa1336020 | Msa1343600 | 0.824225 | 9.059548e-54 | -8.615850e-47 |
| Msa1336020 | Msa1361980 | 0.815945 | 7.127418e-52 | -8.615850e-47 |
| Msa1336020 | Msa1384700 | 0.800592 | 1.340436e-48 | -8.615850e-47 |
| Msa1336020 | Msa1387530 | 0.819326 | 1.231807e-52 | -8.615850e-47 |
| Msa1336020 | Msa1395720 | 0.801796 | 7.602949e-49 | -8.615850e-47 |
| Msa0388210 | Msa1336020 | 0.851152 | 1.069090e-60 | -8.615850e-47 |
| Msa1007900 | Msa1336020 | 0.801756 | 7.747929e-49 | -8.615850e-47 |
| Msa1029860 | Msa1336020 | 0.822841 | 1.909157e-53 | -8.615850e-47 |
| Msa1040330 | Msa1336020 | 0.807177 | 5.740208e-50 | -8.615850e-47 |
| Msa0287480 | Msa1336020 | 0.804825 | 1.793516e-49 | -8.615850e-47 |
| Msa0310190 | Msa1336020 | 0.804216 | 2.402897e-49 | -8.615850e-47 |
| Msa0354600 | Msa1336020 | 0.805960 | 1.037161e-49 | -8.615850e-47 |
| Msa1115980 | Msa1336020 | 0.808292 | 3.327139e-50 | -8.615850e-47 |
| Msa1131120 | Msa1336020 | 0.806042 | 9.968921e-50 | -8.615850e-47 |
| Msa1184680 | Msa1336020 | 0.843786 | 1.131317e-58 | -8.615850e-47 |
| Msa1185270 | Msa1336020 | 0.807649 | 4.559136e-50 | -8.615850e-47 |
| Msa1223710 | Msa1336020 | 0.807130 | 5.873034e-50 | -8.615850e-47 |
| Msa1223990 | Msa1336020 | 0.815739 | 7.921241e-52 | -8.615850e-47 |
| Msa0531050 | Msa1336020 | 0.828793 | 7.380266e-55 | -8.615850e-47 |
| Msa0567330 | Msa1336020 | 0.801360 | 9.340335e-49 | -8.615850e-47 |
| Msa0576320 | Msa1336020 | 0.804673 | 1.929950e-49 | -8.615850e-47 |
| Msa0588040 | Msa1336020 | 0.827509 | 1.504692e-54 | -8.615850e-47 |
| Msa0589000 | Msa1336020 | 0.811256 | 7.668418e-51 | -8.615850e-47 |
| Msa0601380 | Msa1336020 | 0.800154 | 1.646240e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1336020 | MtrunA17_Chr7g0270451 | 97.414 | 232 | 6 | 0 | 1 | 232 | 1 | 232 | 1.02e-157 | 447 |
| Msa1336020 | MtrunA17_Chr7g0270451 | 62.451 | 253 | 67 | 2 | 232 | 459 | 6 | 255 | 3.09e-102 | 306 |
| Msa1336020 | MtrunA17_Chr7g0270441 | 78.740 | 254 | 27 | 2 | 232 | 460 | 6 | 257 | 5.23e-135 | 389 |
| Msa1336020 | MtrunA17_Chr7g0270441 | 68.240 | 233 | 73 | 1 | 1 | 232 | 1 | 233 | 3.44e-108 | 321 |
| Msa1336020 | MtrunA17_Chr2g0324021 | 72.624 | 263 | 41 | 3 | 232 | 466 | 6 | 265 | 6.63e-128 | 371 |
| Msa1336020 | MtrunA17_Chr2g0324021 | 65.948 | 232 | 79 | 0 | 1 | 232 | 1 | 232 | 6.59e-107 | 318 |
| Msa1336020 | MtrunA17_Chr7g0270471 | 80.392 | 153 | 5 | 1 | 341 | 468 | 1 | 153 | 2.22e-77 | 238 |
| Msa1336020 | MtrunA17_Chr7g0270471 | 65.289 | 121 | 42 | 0 | 112 | 232 | 1 | 121 | 1.30e-44 | 153 |
| Msa1336020 | MtrunA17_Chr6g0459261 | 49.356 | 233 | 116 | 2 | 2 | 232 | 21 | 253 | 1.24e-72 | 230 |
| Msa1336020 | MtrunA17_Chr6g0459261 | 48.207 | 251 | 102 | 3 | 232 | 456 | 25 | 273 | 3.44e-72 | 229 |
| Msa1336020 | MtrunA17_Chr6g0459331 | 48.031 | 254 | 104 | 3 | 232 | 459 | 13 | 264 | 6.45e-70 | 223 |
| Msa1336020 | MtrunA17_Chr6g0459331 | 49.180 | 244 | 120 | 3 | 2 | 241 | 9 | 252 | 1.04e-69 | 223 |
| Msa1336020 | MtrunA17_Chr6g0459281 | 47.410 | 251 | 104 | 3 | 232 | 456 | 13 | 261 | 3.80e-69 | 221 |
| Msa1336020 | MtrunA17_Chr6g0459281 | 50.435 | 230 | 112 | 2 | 5 | 232 | 12 | 241 | 2.92e-66 | 214 |
| Msa1336020 | MtrunA17_Chr6g0463951 | 71.918 | 146 | 41 | 0 | 87 | 232 | 1 | 146 | 1.26e-68 | 216 |
| Msa1336020 | MtrunA17_Chr6g0463951 | 50.847 | 177 | 59 | 2 | 313 | 464 | 1 | 174 | 2.04e-50 | 169 |
| Msa1336020 | MtrunA17_Chr6g0459351 | 45.211 | 261 | 115 | 3 | 222 | 456 | 3 | 261 | 4.31e-68 | 218 |
| Msa1336020 | MtrunA17_Chr6g0459351 | 48.085 | 235 | 118 | 3 | 2 | 232 | 7 | 241 | 1.27e-62 | 204 |
| Msa1336020 | MtrunA17_Chr6g0459301 | 45.817 | 251 | 108 | 3 | 232 | 456 | 14 | 262 | 5.29e-67 | 216 |
| Msa1336020 | MtrunA17_Chr6g0459301 | 48.261 | 230 | 117 | 2 | 5 | 232 | 13 | 242 | 5.56e-66 | 213 |
| Msa1336020 | MtrunA17_Chr6g0459271 | 47.639 | 233 | 120 | 2 | 2 | 232 | 9 | 241 | 2.06e-66 | 214 |
| Msa1336020 | MtrunA17_Chr6g0459271 | 46.215 | 251 | 107 | 3 | 232 | 456 | 13 | 261 | 1.44e-65 | 212 |
| Msa1336020 | MtrunA17_Chr4g0025971 | 46.215 | 251 | 110 | 3 | 232 | 460 | 14 | 261 | 3.24e-66 | 214 |
| Msa1336020 | MtrunA17_Chr4g0025971 | 46.320 | 231 | 119 | 3 | 5 | 234 | 13 | 239 | 1.72e-57 | 191 |
| Msa1336020 | MtrunA17_Chr4g0026001 | 47.222 | 252 | 108 | 3 | 232 | 461 | 14 | 262 | 1.10e-65 | 212 |
| Msa1336020 | MtrunA17_Chr4g0026001 | 48.052 | 231 | 115 | 3 | 5 | 234 | 13 | 239 | 9.63e-60 | 197 |
| Msa1336020 | MtrunA17_Chr7g0244061 | 45.149 | 268 | 103 | 3 | 232 | 457 | 29 | 294 | 7.43e-65 | 211 |
| Msa1336020 | MtrunA17_Chr7g0244061 | 43.600 | 250 | 119 | 4 | 2 | 231 | 25 | 272 | 3.74e-57 | 191 |
| Msa1336020 | MtrunA17_Chr4g0025981 | 41.958 | 286 | 135 | 4 | 197 | 460 | 12 | 288 | 8.02e-63 | 207 |
| Msa1336020 | MtrunA17_Chr4g0025981 | 47.162 | 229 | 116 | 3 | 7 | 234 | 42 | 266 | 3.14e-57 | 192 |
| Msa1336020 | MtrunA17_Chr4g0044131 | 43.969 | 257 | 116 | 3 | 229 | 460 | 5 | 258 | 8.33e-63 | 205 |
| Msa1336020 | MtrunA17_Chr4g0044131 | 46.930 | 228 | 119 | 2 | 5 | 231 | 7 | 233 | 1.17e-56 | 189 |
| Msa1336020 | MtrunA17_Chr7g0252031 | 43.678 | 261 | 114 | 4 | 232 | 462 | 35 | 292 | 9.69e-63 | 206 |
| Msa1336020 | MtrunA17_Chr7g0252031 | 51.295 | 193 | 90 | 3 | 5 | 195 | 34 | 224 | 2.32e-53 | 181 |
| Msa1336020 | MtrunA17_Chr7g0266981 | 45.276 | 254 | 111 | 4 | 232 | 460 | 13 | 263 | 9.85e-62 | 202 |
| Msa1336020 | MtrunA17_Chr7g0266981 | 47.807 | 228 | 117 | 2 | 5 | 231 | 12 | 238 | 2.41e-59 | 196 |
| Msa1336020 | MtrunA17_Chr7g0268591 | 42.969 | 256 | 112 | 4 | 232 | 457 | 33 | 284 | 3.71e-61 | 201 |
| Msa1336020 | MtrunA17_Chr7g0268591 | 40.678 | 236 | 132 | 4 | 2 | 231 | 29 | 262 | 3.94e-47 | 164 |
| Msa1336020 | MtrunA17_Chr4g0044111 | 44.882 | 254 | 112 | 4 | 232 | 460 | 13 | 263 | 4.37e-61 | 200 |
| Msa1336020 | MtrunA17_Chr4g0044111 | 47.368 | 228 | 118 | 2 | 5 | 231 | 12 | 238 | 8.63e-59 | 194 |
| Msa1336020 | MtrunA17_Chr7g0266891 | 44.882 | 254 | 112 | 3 | 232 | 460 | 7 | 257 | 3.92e-60 | 197 |
| Msa1336020 | MtrunA17_Chr7g0266891 | 46.696 | 227 | 119 | 2 | 6 | 231 | 7 | 232 | 4.00e-57 | 190 |
| Msa1336020 | MtrunA17_Chr7g0270461 | 95.960 | 99 | 4 | 0 | 232 | 330 | 46 | 144 | 6.45e-59 | 190 |
| Msa1336020 | MtrunA17_Chr7g0270461 | 72.826 | 92 | 25 | 0 | 5 | 96 | 45 | 136 | 4.21e-40 | 141 |
| Msa1336020 | MtrunA17_Chr4g0040371 | 41.758 | 273 | 119 | 5 | 221 | 460 | 9 | 274 | 7.91e-56 | 187 |
| Msa1336020 | MtrunA17_Chr4g0040371 | 44.398 | 241 | 121 | 5 | 1 | 232 | 14 | 250 | 8.67e-49 | 169 |
| Msa1336020 | MtrunA17_Chr7g0267001 | 40.467 | 257 | 107 | 3 | 229 | 460 | 5 | 240 | 1.70e-53 | 180 |
| Msa1336020 | MtrunA17_Chr7g0267001 | 44.934 | 227 | 107 | 3 | 5 | 231 | 7 | 215 | 5.71e-48 | 165 |
| Msa1336020 | MtrunA17_Chr7g0267011 | 48.677 | 189 | 94 | 2 | 232 | 420 | 8 | 193 | 1.26e-51 | 173 |
| Msa1336020 | MtrunA17_Chr7g0267011 | 46.739 | 184 | 96 | 2 | 5 | 187 | 7 | 189 | 4.48e-47 | 161 |
| Msa1336020 | MtrunA17_Chr3g0084871 | 39.855 | 276 | 131 | 4 | 221 | 464 | 5 | 277 | 5.46e-49 | 169 |
| Msa1336020 | MtrunA17_Chr3g0084871 | 44.958 | 238 | 120 | 5 | 4 | 232 | 14 | 249 | 7.69e-47 | 163 |
| Msa1336020 | MtrunA17_Chr7g0266991 | 42.358 | 229 | 113 | 3 | 4 | 231 | 23 | 233 | 2.26e-44 | 155 |
| Msa1336020 | MtrunA17_Chr7g0266991 | 38.288 | 222 | 117 | 3 | 232 | 453 | 25 | 226 | 2.10e-35 | 132 |
| Msa1336020 | MtrunA17_Chr4g0044121 | 39.306 | 173 | 77 | 4 | 313 | 460 | 1 | 170 | 9.31e-28 | 108 |
| Msa1336020 | MtrunA17_Chr4g0044121 | 44.521 | 146 | 79 | 2 | 87 | 231 | 1 | 145 | 5.88e-26 | 103 |
| Msa1336020 | MtrunA17_Chr3g0142651 | 49.107 | 112 | 54 | 2 | 313 | 424 | 1 | 109 | 2.75e-26 | 103 |
| Msa1336020 | MtrunA17_Chr3g0142651 | 47.706 | 109 | 55 | 2 | 87 | 194 | 1 | 108 | 1.01e-24 | 99.4 |
| Msa1336020 | MtrunA17_Chr4g0028921 | 30.303 | 264 | 137 | 7 | 232 | 458 | 11 | 264 | 2.76e-21 | 93.6 |
| Msa1336020 | MtrunA17_Chr4g0028921 | 36.508 | 189 | 113 | 3 | 6 | 187 | 11 | 199 | 4.05e-21 | 92.8 |
| Msa1336020 | MtrunA17_Chr4g0028911 | 35.450 | 189 | 115 | 3 | 6 | 187 | 11 | 199 | 1.05e-18 | 85.9 |
| Msa1336020 | MtrunA17_Chr4g0028911 | 28.571 | 273 | 148 | 7 | 223 | 458 | 2 | 264 | 1.50e-18 | 85.5 |
| Msa1336020 | MtrunA17_Chr3g0122901 | 25.000 | 284 | 175 | 9 | 206 | 458 | 44 | 320 | 4.49e-18 | 85.1 |
| Msa1336020 | MtrunA17_Chr3g0122901 | 27.962 | 211 | 140 | 7 | 5 | 208 | 74 | 279 | 2.93e-15 | 76.6 |
| Msa1336020 | MtrunA17_Chr7g0272961 | 30.288 | 208 | 133 | 3 | 4 | 202 | 38 | 242 | 1.18e-17 | 83.2 |
| Msa1336020 | MtrunA17_Chr7g0272961 | 26.136 | 264 | 155 | 7 | 229 | 460 | 37 | 292 | 4.79e-15 | 75.5 |
| Msa1336020 | MtrunA17_Chr4g0054341 | 31.868 | 182 | 120 | 4 | 7 | 187 | 3 | 181 | 1.89e-16 | 79.7 |
| Msa1336020 | MtrunA17_Chr4g0054341 | 25.837 | 209 | 141 | 5 | 233 | 440 | 3 | 198 | 4.34e-11 | 63.5 |
| Msa1336020 | MtrunA17_Chr1g0171831 | 30.612 | 196 | 124 | 4 | 4 | 187 | 12 | 207 | 4.56e-16 | 78.2 |
| Msa1336020 | MtrunA17_Chr1g0171831 | 29.442 | 197 | 124 | 4 | 232 | 416 | 14 | 207 | 3.69e-13 | 69.7 |
| Msa1336020 | MtrunA17_Chr1g0191751 | 30.189 | 212 | 128 | 4 | 4 | 202 | 99 | 303 | 1.06e-15 | 78.6 |
| Msa1336020 | MtrunA17_Chr1g0191751 | 28.102 | 274 | 131 | 10 | 232 | 460 | 101 | 353 | 1.92e-14 | 74.7 |
| Msa1336020 | MtrunA17_Chr4g0074511 | 28.293 | 205 | 128 | 5 | 4 | 195 | 38 | 236 | 6.24e-15 | 75.5 |
| Msa1336020 | MtrunA17_Chr4g0074511 | 26.255 | 259 | 153 | 9 | 232 | 458 | 40 | 292 | 6.36e-14 | 72.4 |
| Msa1336020 | MtrunA17_Chr7g0259521 | 27.376 | 263 | 153 | 8 | 232 | 463 | 6 | 261 | 4.29e-14 | 72.4 |
| Msa1336020 | MtrunA17_Chr3g0112141 | 26.693 | 251 | 154 | 5 | 232 | 457 | 17 | 262 | 8.50e-14 | 71.6 |
| Msa1336020 | MtrunA17_Chr3g0112271 | 29.644 | 253 | 146 | 8 | 232 | 458 | 17 | 263 | 1.30e-13 | 70.9 |
| Msa1336020 | MtrunA17_Chr3g0112151 | 25.794 | 252 | 157 | 5 | 232 | 458 | 86 | 332 | 5.85e-13 | 70.1 |
| Msa1336020 | MtrunA17_Chr3g0124471 | 30.939 | 181 | 115 | 5 | 10 | 187 | 30 | 203 | 8.99e-13 | 68.9 |
| Msa1336020 | MtrunA17_Chr4g0045041 | 28.846 | 208 | 117 | 5 | 234 | 421 | 6 | 202 | 9.33e-13 | 70.5 |
| Msa1336020 | MtrunA17_Chr4g0045061 | 29.524 | 210 | 117 | 5 | 234 | 423 | 6 | 204 | 1.76e-12 | 69.7 |
| Msa1336020 | MtrunA17_Chr3g0112261 | 27.668 | 253 | 151 | 7 | 232 | 458 | 19 | 265 | 1.93e-12 | 67.4 |
| Msa1336020 | MtrunA17_Chr0c30g0494101 | 28.155 | 206 | 125 | 6 | 4 | 195 | 38 | 234 | 2.81e-12 | 67.4 |
| Msa1336020 | MtrunA17_Chr0c30g0494101 | 26.154 | 260 | 150 | 10 | 232 | 458 | 40 | 290 | 1.42e-11 | 65.1 |
| Msa1336020 | MtrunA17_Chr3g0112171 | 25.794 | 252 | 157 | 5 | 232 | 458 | 15 | 261 | 2.99e-12 | 67.0 |
| Msa1336020 | MtrunA17_Chr7g0239491 | 28.571 | 259 | 142 | 8 | 232 | 457 | 15 | 263 | 4.15e-12 | 66.2 |
| Msa1336020 | MtrunA17_Chr7g0259531 | 27.481 | 262 | 158 | 8 | 223 | 456 | 2 | 259 | 8.84e-12 | 65.5 |
| Msa1336020 | MtrunA17_Chr4g0033091 | 30.180 | 222 | 136 | 8 | 9 | 217 | 27 | 242 | 1.01e-11 | 65.1 |
| Msa1336020 | MtrunA17_Chr3g0124481 | 30.247 | 162 | 104 | 4 | 28 | 187 | 34 | 188 | 1.23e-11 | 65.5 |
| Msa1336020 | MtrunA17_Chr4g0075531 | 30.412 | 194 | 121 | 5 | 5 | 192 | 6 | 191 | 2.33e-11 | 63.9 |
| Msa1336020 | MtrunA17_Chr8g0386171 | 37.063 | 143 | 84 | 3 | 6 | 144 | 52 | 192 | 3.02e-11 | 64.7 |
| Msa1336020 | MtrunA17_Chr4g0032181 | 26.500 | 200 | 119 | 5 | 282 | 458 | 53 | 247 | 5.26e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1336020 | AT2G47140.1 | 64.224 | 232 | 83 | 0 | 1 | 232 | 1 | 232 | 8.47e-104 | 310 |
| Msa1336020 | AT2G47140.1 | 55.336 | 253 | 85 | 2 | 232 | 459 | 6 | 255 | 6.64e-91 | 277 |
| Msa1336020 | AT3G29250.2 | 58.798 | 233 | 94 | 2 | 1 | 232 | 1 | 232 | 7.66e-91 | 277 |
| Msa1336020 | AT3G29250.2 | 51.779 | 253 | 94 | 2 | 232 | 459 | 6 | 255 | 1.08e-81 | 253 |
| Msa1336020 | AT3G29250.3 | 55.906 | 254 | 101 | 3 | 1 | 244 | 37 | 289 | 1.87e-90 | 277 |
| Msa1336020 | AT3G29250.3 | 51.779 | 253 | 94 | 2 | 232 | 459 | 42 | 291 | 1.71e-81 | 254 |
| Msa1336020 | AT3G29260.1 | 60.086 | 233 | 90 | 2 | 1 | 232 | 1 | 231 | 2.74e-90 | 275 |
| Msa1336020 | AT3G29260.1 | 51.383 | 253 | 96 | 2 | 232 | 460 | 6 | 255 | 2.34e-80 | 250 |
| Msa1336020 | AT3G29250.1 | 55.556 | 252 | 101 | 3 | 3 | 244 | 41 | 291 | 4.58e-89 | 274 |
| Msa1336020 | AT3G29250.1 | 51.575 | 254 | 95 | 2 | 231 | 459 | 43 | 293 | 1.35e-81 | 254 |
| Msa1336020 | AT2G47130.1 | 58.898 | 236 | 88 | 2 | 1 | 232 | 1 | 231 | 5.30e-89 | 272 |
| Msa1336020 | AT2G47130.1 | 50.593 | 253 | 98 | 2 | 232 | 460 | 6 | 255 | 2.87e-82 | 255 |
| Msa1336020 | AT2G47120.2 | 55.459 | 229 | 100 | 2 | 4 | 232 | 5 | 231 | 8.40e-83 | 256 |
| Msa1336020 | AT2G47120.2 | 50.000 | 256 | 100 | 3 | 232 | 463 | 7 | 258 | 3.30e-80 | 249 |
| Msa1336020 | AT2G47120.1 | 54.741 | 232 | 103 | 2 | 1 | 232 | 1 | 230 | 1.24e-82 | 256 |
| Msa1336020 | AT2G47120.1 | 50.000 | 256 | 100 | 3 | 232 | 463 | 6 | 257 | 3.55e-80 | 249 |
| Msa1336020 | AT3G51680.1 | 45.076 | 264 | 107 | 2 | 232 | 457 | 32 | 295 | 6.06e-64 | 209 |
| Msa1336020 | AT3G51680.1 | 46.154 | 247 | 117 | 3 | 1 | 231 | 27 | 273 | 2.54e-58 | 194 |
| Msa1336020 | AT4G03140.1 | 41.606 | 274 | 126 | 4 | 216 | 459 | 62 | 331 | 1.91e-57 | 193 |
| Msa1336020 | AT4G03140.1 | 45.503 | 189 | 100 | 3 | 5 | 192 | 77 | 263 | 3.92e-43 | 155 |
| Msa1336020 | AT3G26760.1 | 39.535 | 258 | 121 | 4 | 232 | 457 | 36 | 290 | 6.63e-57 | 191 |
| Msa1336020 | AT3G26760.1 | 44.041 | 193 | 104 | 3 | 5 | 195 | 35 | 225 | 3.64e-45 | 160 |
| Msa1336020 | AT3G26770.1 | 41.016 | 256 | 118 | 4 | 232 | 457 | 41 | 293 | 6.18e-54 | 183 |
| Msa1336020 | AT3G26770.1 | 39.744 | 234 | 132 | 4 | 5 | 231 | 40 | 271 | 7.86e-46 | 162 |
| Msa1336020 | AT3G42960.1 | 44.358 | 257 | 103 | 5 | 235 | 457 | 11 | 261 | 3.32e-50 | 172 |
| Msa1336020 | AT3G42960.1 | 45.960 | 198 | 104 | 1 | 2 | 199 | 4 | 198 | 9.36e-42 | 150 |
| Msa1336020 | AT1G52340.1 | 39.925 | 268 | 123 | 4 | 232 | 464 | 18 | 282 | 7.03e-50 | 172 |
| Msa1336020 | AT1G52340.1 | 44.398 | 241 | 120 | 6 | 4 | 232 | 16 | 254 | 2.42e-47 | 165 |
| Msa1336020 | AT2G47150.1 | 35.565 | 239 | 103 | 6 | 232 | 460 | 1 | 198 | 1.94e-33 | 125 |
| Msa1336020 | AT2G47150.1 | 33.480 | 227 | 98 | 5 | 6 | 232 | 1 | 174 | 2.36e-26 | 106 |
| Msa1336020 | AT2G29340.2 | 29.365 | 252 | 148 | 6 | 232 | 458 | 7 | 253 | 3.03e-18 | 84.7 |
| Msa1336020 | AT2G29340.2 | 30.612 | 196 | 131 | 5 | 3 | 195 | 4 | 197 | 5.24e-12 | 66.6 |
| Msa1336020 | AT2G29340.1 | 29.365 | 252 | 148 | 6 | 232 | 458 | 7 | 253 | 6.71e-18 | 84.7 |
| Msa1336020 | AT2G29340.1 | 30.612 | 196 | 131 | 5 | 3 | 195 | 4 | 197 | 8.39e-12 | 66.6 |
| Msa1336020 | AT2G29310.1 | 29.434 | 265 | 149 | 8 | 232 | 467 | 7 | 262 | 1.08e-17 | 83.2 |
| Msa1336020 | AT1G07450.1 | 28.968 | 252 | 148 | 6 | 232 | 458 | 8 | 253 | 3.84e-17 | 81.6 |
| Msa1336020 | AT3G55310.1 | 28.464 | 267 | 154 | 8 | 224 | 458 | 9 | 270 | 5.76e-17 | 81.6 |
| Msa1336020 | AT3G55310.1 | 32.461 | 191 | 118 | 5 | 6 | 187 | 17 | 205 | 3.18e-13 | 70.5 |
| Msa1336020 | AT2G29290.2 | 31.179 | 263 | 129 | 8 | 232 | 458 | 7 | 253 | 8.88e-17 | 80.5 |
| Msa1336020 | AT2G29360.1 | 31.061 | 264 | 128 | 10 | 232 | 458 | 16 | 262 | 1.00e-16 | 80.5 |
| Msa1336020 | AT2G29360.1 | 30.000 | 200 | 125 | 7 | 3 | 194 | 13 | 205 | 8.61e-11 | 63.2 |
| Msa1336020 | AT3G55290.2 | 28.682 | 258 | 149 | 8 | 232 | 458 | 17 | 270 | 1.74e-16 | 80.1 |
| Msa1336020 | AT3G55290.2 | 33.508 | 191 | 116 | 5 | 6 | 187 | 17 | 205 | 2.72e-15 | 76.6 |
| Msa1336020 | AT3G55290.1 | 28.682 | 258 | 149 | 8 | 232 | 458 | 18 | 271 | 1.81e-16 | 80.1 |
| Msa1336020 | AT3G55290.1 | 33.508 | 191 | 116 | 5 | 6 | 187 | 18 | 206 | 2.84e-15 | 76.6 |
| Msa1336020 | AT1G62610.3 | 27.444 | 266 | 159 | 7 | 224 | 458 | 7 | 269 | 2.21e-16 | 79.7 |
| Msa1336020 | AT1G62610.3 | 31.414 | 191 | 121 | 4 | 6 | 187 | 15 | 204 | 4.66e-14 | 72.8 |
| Msa1336020 | AT2G30670.1 | 28.517 | 263 | 154 | 7 | 232 | 467 | 7 | 262 | 2.23e-16 | 79.3 |
| Msa1336020 | AT1G62610.4 | 27.444 | 266 | 159 | 7 | 224 | 458 | 11 | 273 | 2.29e-16 | 79.7 |
| Msa1336020 | AT1G62610.4 | 31.414 | 191 | 121 | 4 | 6 | 187 | 19 | 208 | 4.85e-14 | 72.8 |
| Msa1336020 | AT1G62610.2 | 27.444 | 266 | 159 | 7 | 224 | 458 | 5 | 267 | 2.36e-16 | 79.7 |
| Msa1336020 | AT1G62610.2 | 31.414 | 191 | 121 | 4 | 6 | 187 | 13 | 202 | 4.30e-14 | 72.8 |
| Msa1336020 | AT1G62610.1 | 27.444 | 266 | 159 | 7 | 224 | 458 | 6 | 268 | 2.41e-16 | 79.7 |
| Msa1336020 | AT1G62610.1 | 31.414 | 191 | 121 | 4 | 6 | 187 | 14 | 203 | 4.91e-14 | 72.8 |
| Msa1336020 | AT1G63380.3 | 27.715 | 267 | 157 | 9 | 224 | 458 | 7 | 269 | 7.08e-16 | 78.2 |
| Msa1336020 | AT1G63380.3 | 31.937 | 191 | 120 | 5 | 6 | 187 | 15 | 204 | 1.39e-13 | 71.6 |
| Msa1336020 | AT1G63380.1 | 27.715 | 267 | 157 | 9 | 224 | 458 | 9 | 271 | 8.46e-16 | 78.2 |
| Msa1336020 | AT1G63380.1 | 31.937 | 191 | 120 | 5 | 6 | 187 | 17 | 206 | 1.45e-13 | 71.6 |
| Msa1336020 | AT1G63380.4 | 27.715 | 267 | 157 | 9 | 224 | 458 | 11 | 273 | 8.77e-16 | 78.2 |
| Msa1336020 | AT1G63380.4 | 31.937 | 191 | 120 | 5 | 6 | 187 | 19 | 208 | 1.62e-13 | 71.2 |
| Msa1336020 | AT2G29340.3 | 30.348 | 201 | 132 | 4 | 232 | 429 | 7 | 202 | 1.07e-15 | 76.3 |
| Msa1336020 | AT2G29340.3 | 30.612 | 196 | 131 | 5 | 3 | 195 | 4 | 197 | 1.66e-12 | 67.0 |
| Msa1336020 | AT2G29340.4 | 30.348 | 201 | 132 | 4 | 232 | 429 | 7 | 202 | 1.07e-15 | 76.3 |
| Msa1336020 | AT2G29340.4 | 30.612 | 196 | 131 | 5 | 3 | 195 | 4 | 197 | 1.66e-12 | 67.0 |
| Msa1336020 | AT1G63380.2 | 27.715 | 267 | 157 | 9 | 224 | 458 | 14 | 276 | 1.38e-15 | 77.4 |
| Msa1336020 | AT1G63380.2 | 31.937 | 191 | 120 | 5 | 6 | 187 | 22 | 211 | 1.64e-13 | 71.2 |
| Msa1336020 | AT2G29260.1 | 28.013 | 307 | 160 | 11 | 193 | 458 | 28 | 314 | 2.16e-15 | 77.4 |
| Msa1336020 | AT5G06060.1 | 29.688 | 256 | 142 | 7 | 232 | 458 | 9 | 255 | 2.19e-15 | 76.6 |
| Msa1336020 | AT4G05530.1 | 31.349 | 252 | 136 | 8 | 232 | 456 | 9 | 250 | 2.75e-15 | 76.3 |
| Msa1336020 | AT1G07440.1 | 27.481 | 262 | 139 | 8 | 232 | 458 | 12 | 257 | 3.32e-15 | 75.9 |
| Msa1336020 | AT2G29350.1 | 29.771 | 262 | 133 | 10 | 232 | 458 | 15 | 260 | 1.02e-14 | 74.7 |
| Msa1336020 | AT2G17845.1 | 27.000 | 300 | 172 | 11 | 197 | 459 | 15 | 304 | 1.05e-14 | 75.5 |
| Msa1336020 | AT2G17845.1 | 33.668 | 199 | 108 | 7 | 6 | 187 | 47 | 238 | 1.28e-14 | 75.1 |
| Msa1336020 | AT1G54870.2 | 30.622 | 209 | 131 | 4 | 4 | 202 | 82 | 286 | 1.28e-14 | 75.5 |
| Msa1336020 | AT1G54870.2 | 26.054 | 261 | 153 | 7 | 232 | 460 | 84 | 336 | 1.29e-12 | 69.3 |
| Msa1336020 | AT1G24360.1 | 25.385 | 260 | 147 | 7 | 232 | 458 | 74 | 319 | 1.30e-14 | 75.1 |
| Msa1336020 | AT1G24360.1 | 28.061 | 196 | 134 | 5 | 4 | 195 | 72 | 264 | 1.43e-11 | 65.9 |
| Msa1336020 | AT1G54870.1 | 30.622 | 209 | 131 | 4 | 4 | 202 | 80 | 284 | 1.40e-14 | 75.1 |
| Msa1336020 | AT1G54870.1 | 26.054 | 261 | 153 | 7 | 232 | 460 | 82 | 334 | 1.39e-12 | 69.3 |
| Msa1336020 | AT3G46170.1 | 27.170 | 265 | 160 | 7 | 224 | 458 | 18 | 279 | 1.92e-14 | 74.3 |
| Msa1336020 | AT3G46170.1 | 31.579 | 190 | 121 | 4 | 6 | 187 | 26 | 214 | 1.88e-13 | 71.2 |
| Msa1336020 | AT2G29290.1 | 31.481 | 216 | 107 | 7 | 268 | 458 | 37 | 236 | 5.10e-14 | 72.0 |
| Msa1336020 | AT2G29330.1 | 27.953 | 254 | 149 | 7 | 232 | 458 | 7 | 253 | 6.51e-14 | 72.0 |
| Msa1336020 | AT5G65205.1 | 30.256 | 195 | 126 | 5 | 1 | 192 | 1 | 188 | 1.42e-13 | 71.6 |
| Msa1336020 | AT3G05260.1 | 30.660 | 212 | 126 | 6 | 4 | 202 | 35 | 238 | 1.70e-13 | 71.2 |
| Msa1336020 | AT3G05260.1 | 25.483 | 259 | 153 | 7 | 232 | 458 | 37 | 287 | 2.01e-11 | 65.1 |
| Msa1336020 | AT1G49670.1 | 29.048 | 210 | 118 | 5 | 234 | 423 | 6 | 204 | 1.88e-13 | 73.2 |
| Msa1336020 | AT1G49670.2 | 29.048 | 210 | 118 | 5 | 234 | 423 | 6 | 204 | 2.05e-13 | 73.2 |
| Msa1336020 | AT2G29310.3 | 29.648 | 199 | 124 | 6 | 232 | 423 | 7 | 196 | 2.15e-13 | 69.3 |
| Msa1336020 | AT2G29150.1 | 32.857 | 210 | 123 | 9 | 3 | 202 | 11 | 212 | 4.92e-13 | 69.7 |
| Msa1336020 | AT2G29150.1 | 30.038 | 263 | 131 | 11 | 232 | 458 | 16 | 261 | 7.01e-13 | 69.3 |
| Msa1336020 | AT2G29370.1 | 28.897 | 263 | 135 | 10 | 232 | 458 | 16 | 262 | 1.04e-12 | 68.6 |
| Msa1336020 | AT1G10310.1 | 30.366 | 191 | 128 | 4 | 9 | 196 | 18 | 206 | 1.69e-12 | 67.8 |
| Msa1336020 | AT5G10050.1 | 28.947 | 190 | 123 | 6 | 7 | 192 | 6 | 187 | 1.93e-12 | 68.2 |
| Msa1336020 | AT2G29350.3 | 29.717 | 212 | 109 | 8 | 271 | 458 | 27 | 222 | 3.66e-12 | 66.6 |
| Msa1336020 | AT2G29300.1 | 27.547 | 265 | 155 | 10 | 232 | 467 | 7 | 263 | 4.05e-12 | 67.0 |
| Msa1336020 | AT2G29320.1 | 29.344 | 259 | 140 | 11 | 232 | 458 | 13 | 260 | 5.59e-12 | 66.6 |
| Msa1336020 | AT2G29350.2 | 30.583 | 206 | 113 | 8 | 232 | 423 | 15 | 204 | 8.12e-12 | 65.5 |
| Msa1336020 | AT4G20760.1 | 29.843 | 191 | 113 | 7 | 6 | 176 | 41 | 230 | 1.61e-11 | 65.5 |
| Msa1336020 | AT4G20760.2 | 30.000 | 190 | 112 | 7 | 7 | 176 | 62 | 250 | 1.90e-11 | 65.5 |
| Msa1336020 | AT2G29300.2 | 27.451 | 255 | 148 | 10 | 232 | 457 | 7 | 253 | 3.66e-11 | 64.3 |
| Msa1336020 | AT5G50700.1 | 29.412 | 187 | 122 | 6 | 6 | 187 | 45 | 226 | 5.62e-11 | 64.3 |
| Msa1336020 | AT5G50600.1 | 29.412 | 187 | 122 | 6 | 6 | 187 | 45 | 226 | 5.62e-11 | 64.3 |
| Msa1336020 | AT5G18210.1 | 27.027 | 259 | 148 | 8 | 232 | 456 | 8 | 259 | 7.39e-11 | 63.2 |
| Msa1336020 | AT2G29310.2 | 27.236 | 246 | 141 | 8 | 251 | 467 | 24 | 260 | 7.44e-11 | 63.2 |
Find 94 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGAAATTGTTTGCCGAAAA+TGG | 0.162832 | tig0000788:-94074 | Msa1336020:CDS |
| AGTAGACATTCAAGATAAAT+TGG | 0.192212 | tig0000788:-94036 | Msa1336020:CDS |
| AGTGTGGCTGGCTGTGTTGC+TGG | 0.229497 | tig0000788:-89864 | Msa1336020:CDS |
| TTTAGTAATGCAGGAATAAT+AGG | 0.245500 | tig0000788:-93885 | Msa1336020:CDS |
| GTTAATTCAATTTCACCTTC+TGG | 0.256250 | tig0000788:-89750 | Msa1336020:CDS |
| TTTATGTAGAGCACTGAATA+TGG | 0.259202 | tig0000788:-89712 | Msa1336020:CDS |
| ACATCCAAACATGGTCTTAT+AGG | 0.260415 | tig0000788:-89819 | Msa1336020:CDS |
| AGCTGATCCACGAACATTAA+TGG | 0.267172 | tig0000788:+89956 | None:intergenic |
| CACACTGGCCGTGCAAATTA+TGG | 0.271414 | tig0000788:+89881 | None:intergenic |
| GCAGATATCAATGATGAATT+TGG | 0.272072 | tig0000788:-90191 | Msa1336020:CDS |
| GTAAAGACATTTGTGGAAAA+TGG | 0.275212 | tig0000788:-90230 | Msa1336020:CDS |
| CACCAAGTTGCAACTTCAAT+TGG | 0.283127 | tig0000788:-90167 | Msa1336020:CDS |
| TGCAGTGAGCTTGGAGCTTA+TGG | 0.289846 | tig0000788:-89780 | Msa1336020:CDS |
| GTTAATAGTATATCCCCTTT+TGG | 0.296854 | tig0000788:-93603 | Msa1336020:CDS |
| TGTGGAGAACTTGGTGGTTA+TGG | 0.318822 | tig0000788:-93633 | Msa1336020:CDS |
| GAATGAATTTGAGAAAACTA+TGG | 0.325001 | tig0000788:-93832 | Msa1336020:CDS |
| GGCTGTGTTGCTGGATGTGC+AGG | 0.325612 | tig0000788:-89855 | Msa1336020:CDS |
| GATGAATCGGCTTATATTAG+TGG | 0.352269 | tig0000788:-89587 | Msa1336020:CDS |
| GGAATAATAGGCTCTTTATC+TGG | 0.363048 | tig0000788:-93873 | Msa1336020:CDS |
| CAAGCACGCTGCGCGTGTTA+TGG | 0.373393 | tig0000788:-89925 | Msa1336020:CDS |
| TTTGAAGGGTATTGTGTTGA+AGG | 0.381455 | tig0000788:-93502 | Msa1336020:CDS |
| AAGGCCTATAAGACCATGTT+TGG | 0.388328 | tig0000788:+89815 | None:intergenic |
| GTTTCTTGCTTCTGATGAAT+CGG | 0.388679 | tig0000788:-89600 | Msa1336020:CDS |
| TTTGATGTAGTATAACCATT+AGG | 0.390831 | tig0000788:+93687 | None:intergenic |
| ACAGGTGCAGCCAGTGGAAT+TGG | 0.391122 | tig0000788:-94107 | Msa1336020:CDS |
| CATATCATCATTGTGATGTC+AGG | 0.396278 | tig0000788:-93974 | Msa1336020:CDS |
| ACTAGCGTTGCAGCTTCTAT+TGG | 0.399254 | tig0000788:-93720 | Msa1336020:CDS |
| CGCTCGACGTGCAGTGAGCT+TGG | 0.402697 | tig0000788:-89789 | Msa1336020:CDS |
| ATTGCTGAACATGATGTCTA+AGG | 0.405158 | tig0000788:+90055 | None:intergenic |
| ACTGGTGGAGCAAGCGGAAT+AGG | 0.405788 | tig0000788:-90263 | Msa1336020:CDS |
| ATTGGTGGAACAGGTCCTAA+TGG | 0.415583 | tig0000788:-93702 | Msa1336020:CDS |
| AAAATCTAGGTTGGAGGGTA+AGG | 0.417028 | tig0000788:-94141 | Msa1336020:CDS |
| GCAGCTTCTATTGGTGGAAC+AGG | 0.426744 | tig0000788:-93711 | Msa1336020:CDS |
| CGTAAAGTTGCAGATTCAAT+AGG | 0.430870 | tig0000788:-94011 | Msa1336020:CDS |
| AGAGGTGTTGCAACTCCAAA+AGG | 0.435975 | tig0000788:+93588 | None:intergenic |
| TTATATTAGTGGACAAAACT+TGG | 0.437085 | tig0000788:-89576 | Msa1336020:CDS |
| GACATCATGTTCAGCAATGT+TGG | 0.440291 | tig0000788:-90050 | Msa1336020:CDS |
| ACATCATGTTCAGCAATGTT+GGG | 0.442033 | tig0000788:-90049 | Msa1336020:CDS |
| TTATGTAGAGCACTGAATAT+GGG | 0.444828 | tig0000788:-89711 | Msa1336020:CDS |
| AATATATTATGACAAAATCT+AGG | 0.448610 | tig0000788:-94154 | None:intergenic |
| TAGTTCTCATGCTAATTTGA+AGG | 0.456961 | tig0000788:-93517 | Msa1336020:CDS |
| ACCAAGTTGCAACTTCAATT+GGG | 0.462862 | tig0000788:-90166 | Msa1336020:CDS |
| GGTAAGGTGGCAATAATAAC+AGG | 0.465773 | tig0000788:-94125 | Msa1336020:CDS |
| AGAAACAATTCATTTCACTT+TGG | 0.465833 | tig0000788:-93934 | Msa1336020:CDS |
| CACTGCACGTCGAGCGAACA+AGG | 0.479956 | tig0000788:+89796 | None:intergenic |
| TGTTTCTTCACCAATTCCAC+TGG | 0.482489 | tig0000788:+94097 | None:intergenic |
| ATTTGCACGGCCAGTGTGGC+TGG | 0.483627 | tig0000788:-89876 | Msa1336020:CDS |
| ATGTTCAGCAATGTTGGGAT+TGG | 0.487016 | tig0000788:-90044 | Msa1336020:CDS |
| TTCAGCAATGTTGGGATTGG+AGG | 0.491721 | tig0000788:-90041 | Msa1336020:CDS |
| TAAGCATGCTGCGCGCGCCA+TGG | 0.496972 | tig0000788:-93778 | Msa1336020:CDS |
| GTAGACATTCAAGATAAATT+GGG | 0.503523 | tig0000788:-94035 | Msa1336020:CDS |
| ACCATGGCCATTAATGTTCG+TGG | 0.509551 | tig0000788:-89963 | Msa1336020:CDS |
| AGCGTTGCAGCTTCTATTGG+TGG | 0.515248 | tig0000788:-93717 | Msa1336020:CDS |
| ACCCAATTGAAGTTGCAACT+TGG | 0.520892 | tig0000788:+90165 | None:intergenic |
| AAATCAGCTTGTGGAGAACT+TGG | 0.524096 | tig0000788:-93642 | Msa1336020:CDS |
| AGTTCTCATGCTAATTTGAA+GGG | 0.524264 | tig0000788:-93516 | Msa1336020:CDS |
| CAATTGAAGTTGCAACTTGG+TGG | 0.525100 | tig0000788:+90168 | None:intergenic |
| TATTATGACAAAATCTAGGT+TGG | 0.525544 | tig0000788:-94150 | None:intergenic |
| TTCAGTGCTCTACATAAAAG+AGG | 0.531671 | tig0000788:+89717 | None:intergenic |
| GAGGTGTTGCAACTCCAAAA+GGG | 0.538111 | tig0000788:+93589 | None:intergenic |
| AGAGACAGTAAAGACATTTG+TGG | 0.542046 | tig0000788:-90237 | Msa1336020:CDS |
| ACTATGGCTACAAATGTTGT+TGG | 0.550336 | tig0000788:-93816 | Msa1336020:CDS |
| GGTAAGGTTGCTATAGTGAC+TGG | 0.551471 | tig0000788:-90281 | Msa1336020:CDS |
| TATGACAAAATCTAGGTTGG+AGG | 0.554009 | tig0000788:-94147 | Msa1336020:CDS |
| AGCAACACAGCCAGCCACAC+TGG | 0.557849 | tig0000788:+89866 | None:intergenic |
| ATATCATCATTGTGATGTCA+GGG | 0.558680 | tig0000788:-93973 | Msa1336020:CDS |
| TATGTAGAGCACTGAATATG+GGG | 0.559108 | tig0000788:-89710 | Msa1336020:CDS |
| ATGACAAAATCTAGGTTGGA+GGG | 0.562378 | tig0000788:-94146 | Msa1336020:CDS |
| GGACTTGTGAAATCAGCTTG+TGG | 0.562826 | tig0000788:-93651 | Msa1336020:CDS |
| GGACAAAACTTGGTGGTCGA+TGG | 0.563116 | tig0000788:-89566 | Msa1336020:CDS |
| TTGTAAGCTATACACGAAAG+AGG | 0.567482 | tig0000788:+93570 | None:intergenic |
| GCACGCTGCGCGTGTTATGG+TGG | 0.567971 | tig0000788:-89922 | Msa1336020:CDS |
| TCCACGAACATTAATGGCCA+TGG | 0.568390 | tig0000788:+89962 | None:intergenic |
| CAAAACTTGGTGGTCGATGG+AGG | 0.576243 | tig0000788:-89563 | Msa1336020:CDS |
| TCAGCTTGTGGAGAACTTGG+TGG | 0.578232 | tig0000788:-93639 | Msa1336020:CDS |
| TCGTGGATCCATAATTTGCA+CGG | 0.579852 | tig0000788:-89889 | Msa1336020:CDS |
| ATCTAGGTTGGAGGGTAAGG+TGG | 0.582293 | tig0000788:-94138 | Msa1336020:CDS |
| CATAATTTGCACGGCCAGTG+TGG | 0.586134 | tig0000788:-89880 | Msa1336020:CDS |
| AGAGGTGTGGCAACTCCAGA+AGG | 0.591710 | tig0000788:+89735 | None:intergenic |
| CTACTAGATTCAACTTCATG+AGG | 0.605548 | tig0000788:+93540 | None:intergenic |
| TATTAGTGGACAAAACTTGG+TGG | 0.609451 | tig0000788:-89573 | Msa1336020:CDS |
| TTTCATCTCTCACGTCACAA+TGG | 0.615719 | tig0000788:+90123 | None:intergenic |
| ATAGTGACTGGTGGAGCAAG+CGG | 0.615867 | tig0000788:-90269 | Msa1336020:CDS |
| CATCTCTCACGTCACAATGG+TGG | 0.625388 | tig0000788:+90126 | None:intergenic |
| TGCTCTACATAAAAGAGGTG+TGG | 0.627277 | tig0000788:+89722 | None:intergenic |
| AAGGTTGCTATAGTGACTGG+TGG | 0.636382 | tig0000788:-90278 | Msa1336020:CDS |
| ATGTAGAGCACTGAATATGG+GGG | 0.636447 | tig0000788:-89709 | Msa1336020:CDS |
| AGGTGTTGCAACTCCAAAAG+GGG | 0.641177 | tig0000788:+93590 | None:intergenic |
| ATAATAACAGGTGCAGCCAG+TGG | 0.644904 | tig0000788:-94113 | Msa1336020:CDS |
| GCTTCACTGTCGTAAACCGA+TGG | 0.650644 | tig0000788:-89541 | Msa1336020:CDS |
| TAGTGCATATAATCGATCCA+CGG | 0.666748 | tig0000788:+93742 | None:intergenic |
| GATTATACAACATCCAAACA+TGG | 0.670645 | tig0000788:-89828 | Msa1336020:CDS |
| AAATGAATTTGACAACACCA+TGG | 0.693926 | tig0000788:-89979 | Msa1336020:CDS |
| TGTAGAGCACTGAATATGGG+GGG | 0.706314 | tig0000788:-89708 | Msa1336020:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATAATATCTTTCTAT+TGG | - | tig0000788:91342-91361 | Msa1336020:intron | 10.0% |
| !! | AAAAATAATATCTTTCTATT+GGG | - | tig0000788:91343-91362 | Msa1336020:intron | 10.0% |
| !! | TTTAAATTAAAAATAAAAGC+CGG | - | tig0000788:91954-91973 | Msa1336020:intron | 10.0% |
| !!! | CTTTTATATAAGAAATAAAA+TGG | + | tig0000788:93134-93153 | None:intergenic | 10.0% |
| !! | GTTTGTTCAAAAAAAAAAAA+AGG | + | tig0000788:90953-90972 | None:intergenic | 15.0% |
| !!! | TGATCTAATATATTTCATTT+TGG | + | tig0000788:90975-90994 | None:intergenic | 15.0% |
| !!! | TAACCATTTATTTCTTTTAA+TGG | - | tig0000788:91830-91849 | Msa1336020:intron | 15.0% |
| !!! | TGATATATTTTTTTCAAACT+AGG | - | tig0000788:92182-92201 | Msa1336020:intron | 15.0% |
| !!! | GTATATAATTTTCAAAACTA+TGG | - | tig0000788:92218-92237 | Msa1336020:intron | 15.0% |
| !!! | CTTTTAAACTTATATGTAAA+AGG | - | tig0000788:93167-93186 | Msa1336020:intron | 15.0% |
| !!! | TGAATACTATATTTTTTCAT+AGG | - | tig0000788:93356-93375 | Msa1336020:intron | 15.0% |
| !! | ATAGTAGAATGAAATTAGAT+CGG | + | tig0000788:90476-90495 | None:intergenic | 20.0% |
| !!! | GCTTTGTATTTTTTTTTTCT+TGG | - | tig0000788:90589-90608 | Msa1336020:intron | 20.0% |
| !!! | TGCAAGATTTTTTCTTTTTT+TGG | - | tig0000788:90880-90899 | Msa1336020:intron | 20.0% |
| !!! | AAGATTTTTTCTTTTTTTGG+TGG | - | tig0000788:90883-90902 | Msa1336020:intron | 20.0% |
| !! | ATATATTAGATCACAAAAAG+TGG | - | tig0000788:90982-91001 | Msa1336020:intron | 20.0% |
| !!! | ACTAAACTTTGTATTTTGTT+GGG | + | tig0000788:91041-91060 | None:intergenic | 20.0% |
| !!! | TTAAATTTCTGTCTTTTTCT+TGG | + | tig0000788:91196-91215 | None:intergenic | 20.0% |
| !! | AAGAATTAAAAAAATAGACG+TGG | + | tig0000788:91398-91417 | None:intergenic | 20.0% |
| !! | TAAAAACATCTATTCTATCT+AGG | - | tig0000788:91499-91518 | Msa1336020:intron | 20.0% |
| !! | AAAAACATCTATTCTATCTA+GGG | - | tig0000788:91500-91519 | Msa1336020:intron | 20.0% |
| !! | ATAACGAATATTACTTACAA+TGG | - | tig0000788:91597-91616 | Msa1336020:intron | 20.0% |
| !! | CATCCATTAAAAGAAATAAA+TGG | + | tig0000788:91836-91855 | None:intergenic | 20.0% |
| !!! | TAATTTTTTTTTGAACAAGC+CGG | + | tig0000788:91976-91995 | None:intergenic | 20.0% |
| !! | GATAGTGTATAATATATGTA+AGG | - | tig0000788:92017-92036 | Msa1336020:intron | 20.0% |
| !! | TGTATAATATATGTAAGGTA+TGG | - | tig0000788:92022-92041 | Msa1336020:intron | 20.0% |
| !! | GTATAATATATGTAAGGTAT+GGG | - | tig0000788:92023-92042 | Msa1336020:intron | 20.0% |
| !! | TATAATATATGTAAGGTATG+GGG | - | tig0000788:92024-92043 | Msa1336020:intron | 20.0% |
| !!! | TATTTTTTTCAAACTAGGAT+AGG | - | tig0000788:92187-92206 | Msa1336020:intron | 20.0% |
| !! | ATGAAATCACTTATTCAATT+AGG | + | tig0000788:92609-92628 | None:intergenic | 20.0% |
| !! | TTAAAACTTAAATGCACATT+TGG | + | tig0000788:93076-93095 | None:intergenic | 20.0% |
| !!! | TTTCTACCTTTTTCTTTTTT+TGG | - | tig0000788:93274-93293 | Msa1336020:intron | 20.0% |
| !! | AAATATGTATATACACTACT+AGG | + | tig0000788:93317-93336 | None:intergenic | 20.0% |
| !!! | GTGTATATACATATTTCTAT+TGG | - | tig0000788:93321-93340 | Msa1336020:intron | 20.0% |
| !!! | TACTATATTTTTTCATAGGT+TGG | - | tig0000788:93360-93379 | Msa1336020:intron | 20.0% |
| !! | AATAACAAATGCTCCATTTT+CGG | + | tig0000788:89608-89627 | None:intergenic | 25.0% |
| ! | AGTAGACATTCAAGATAAAT+TGG | - | tig0000788:89630-89649 | Msa1336020:intron | 25.0% |
| ! | GTAGACATTCAAGATAAATT+GGG | - | tig0000788:89631-89650 | Msa1336020:intron | 25.0% |
| ! | AGAAACAATTCATTTCACTT+TGG | - | tig0000788:89732-89751 | Msa1336020:CDS | 25.0% |
| !!! | GATATTTTGTTTAGTAATGC+AGG | - | tig0000788:89772-89791 | Msa1336020:CDS | 25.0% |
| ! | TTTAGTAATGCAGGAATAAT+AGG | - | tig0000788:89781-89800 | Msa1336020:CDS | 25.0% |
| ! | GAATGAATTTGAGAAAACTA+TGG | - | tig0000788:89834-89853 | Msa1336020:CDS | 25.0% |
| ! | TTTGATGTAGTATAACCATT+AGG | + | tig0000788:89982-90001 | None:intergenic | 25.0% |
| !! | AAAAAAGAAGAAGAGTACAT+TGG | + | tig0000788:90510-90529 | None:intergenic | 25.0% |
| !!! | ATTTTTTCTTTTTTTGGTGG+TGG | - | tig0000788:90886-90905 | Msa1336020:intron | 25.0% |
| !! | CACTAAACTTTGTATTTTGT+TGG | + | tig0000788:91042-91061 | None:intergenic | 25.0% |
| ! | ATAACACTCATACAAAGTAT+TGG | - | tig0000788:91116-91135 | Msa1336020:intron | 25.0% |
| !! | TAACACTCATACAAAGTATT+GGG | - | tig0000788:91117-91136 | Msa1336020:intron | 25.0% |
| ! | TATGAAATGTAGCAATTGTA+AGG | - | tig0000788:91366-91385 | Msa1336020:intron | 25.0% |
| ! | ACGAATACATGGAAAAAAAA+TGG | - | tig0000788:91890-91909 | Msa1336020:intron | 25.0% |
| ! | AACTATGGTAGATTGTTAAA+AGG | - | tig0000788:92233-92252 | Msa1336020:intron | 25.0% |
| ! | ACTATGGTAGATTGTTAAAA+GGG | - | tig0000788:92234-92253 | Msa1336020:intron | 25.0% |
| !! | TGGTTATGAAGATATTTTTC+AGG | - | tig0000788:92296-92315 | Msa1336020:intron | 25.0% |
| !! | TTTTATACGCTTTATCTTCT+TGG | + | tig0000788:92434-92453 | None:intergenic | 25.0% |
| ! | AAAGAAGAAGAAGAAGAAAA+AGG | + | tig0000788:92521-92540 | None:intergenic | 25.0% |
| ! | ACTTATTCAATTAGGATAGA+AGG | + | tig0000788:92601-92620 | None:intergenic | 25.0% |
| ! | GTGAAATCACTTATTCAATT+AGG | + | tig0000788:92632-92651 | None:intergenic | 25.0% |
| ! | GTCATATTAGTCATATTTGT+AGG | - | tig0000788:92889-92908 | Msa1336020:intron | 25.0% |
| ! | TCCATGTTAATAGCATAAAA+CGG | + | tig0000788:92928-92947 | None:intergenic | 25.0% |
| ! | CAAATTCGCTAAAAACAAAA+TGG | + | tig0000788:92977-92996 | None:intergenic | 25.0% |
| ! | TATATAAAAGAATGAGACGA+AGG | - | tig0000788:93144-93163 | Msa1336020:intron | 25.0% |
| ! | GAATAATCATGTCAAAACAA+AGG | - | tig0000788:93219-93238 | Msa1336020:intron | 25.0% |
| ! | GTTTGTCCAAAAAAAGAAAA+AGG | + | tig0000788:93283-93302 | None:intergenic | 25.0% |
| !!! | TATATTTTTTCATAGGTTGG+AGG | - | tig0000788:93363-93382 | Msa1336020:intron | 25.0% |
| !!! | ATATTTTTTCATAGGTTGGA+GGG | - | tig0000788:93364-93383 | Msa1336020:intron | 25.0% |
| ! | AATGATTCTGCTAATTTGAA+AGG | - | tig0000788:94004-94023 | Msa1336020:CDS | 25.0% |
| ! | TTTGAAAGGAATTACACTAA+AGG | - | tig0000788:94018-94037 | Msa1336020:CDS | 25.0% |
| !! | TTATATTAGTGGACAAAACT+TGG | - | tig0000788:94090-94109 | Msa1336020:CDS | 25.0% |
| ATATCATCATTGTGATGTCA+GGG | - | tig0000788:89693-89712 | Msa1336020:intron | 30.0% | |
| ! | CATTTCACTTTGGAAAAACA+CGG | - | tig0000788:89742-89761 | Msa1336020:CDS | 30.0% |
| ! | ACATCAAAACATGCTCTTTT+AGG | - | tig0000788:89994-90013 | Msa1336020:CDS | 30.0% |
| ! | GTTAATAGTATATCCCCTTT+TGG | - | tig0000788:90063-90082 | Msa1336020:CDS | 30.0% |
| TAGTTCTCATGCTAATTTGA+AGG | - | tig0000788:90149-90168 | Msa1336020:CDS | 30.0% | |
| AGTTCTCATGCTAATTTGAA+GGG | - | tig0000788:90150-90169 | Msa1336020:CDS | 30.0% | |
| TTATATCAGTGGTCATAACT+TGG | - | tig0000788:90236-90255 | Msa1336020:CDS | 30.0% | |
| TATTATTCTGTCAAACTCAC+CGG | + | tig0000788:90342-90361 | None:intergenic | 30.0% | |
| CACGAAATTTGACAAAATCA+CGG | + | tig0000788:90408-90427 | None:intergenic | 30.0% | |
| CAAAACATTAGGTGTATGTT+TGG | + | tig0000788:90436-90455 | None:intergenic | 30.0% | |
| ! | AACATACACCTAATGTTTTG+CGG | - | tig0000788:90436-90455 | Msa1336020:intron | 30.0% |
| ! | AAGAAGAGTACATTGGATAA+AGG | + | tig0000788:90503-90522 | None:intergenic | 30.0% |
| CAAGCTTAATTGAGGAAAAA+TGG | + | tig0000788:90563-90582 | None:intergenic | 30.0% | |
| ! | TTTTTCTTGGTTCAAAGCAA+AGG | - | tig0000788:90602-90621 | Msa1336020:intron | 30.0% |
| GTGTTTGTCGTTCTTAATTT+CGG | + | tig0000788:90760-90779 | None:intergenic | 30.0% | |
| ! | ATTTAAAGCATCAACATCTC+TGG | + | tig0000788:90796-90815 | None:intergenic | 30.0% |
| TGCATAATATATGCAAGGTT+CGG | + | tig0000788:90926-90945 | None:intergenic | 30.0% | |
| GACAATGCATAATATATGCA+AGG | + | tig0000788:90931-90950 | None:intergenic | 30.0% | |
| ! | AAACTTTGTATTTTGTTGGG+TGG | + | tig0000788:91038-91057 | None:intergenic | 30.0% |
| !!! | TTCTTCTGTCGTGTATTTTT+TGG | + | tig0000788:91072-91091 | None:intergenic | 30.0% |
| TTATACACTATCTCTGTTCA+CGG | + | tig0000788:92009-92028 | None:intergenic | 30.0% | |
| !!! | ATGTCCTATTTTTTTCCTGA+TGG | + | tig0000788:92062-92081 | None:intergenic | 30.0% |
| TTCAAACACGTCATTTCATT+TGG | - | tig0000788:92081-92100 | Msa1336020:intron | 30.0% | |
| ! | CTTATTATTTCCCATCGATT+TGG | - | tig0000788:92276-92295 | Msa1336020:intron | 30.0% |
| ATCTTCATAACCAAATCGAT+GGG | + | tig0000788:92289-92308 | None:intergenic | 30.0% | |
| TATCTTCATAACCAAATCGA+TGG | + | tig0000788:92290-92309 | None:intergenic | 30.0% | |
| !!! | AGATATTTTTCAGGAACGTT+TGG | - | tig0000788:92305-92324 | Msa1336020:intron | 30.0% |
| AGGATAGAAGGAAAACAATT+CGG | + | tig0000788:92589-92608 | None:intergenic | 30.0% | |
| TATGACTATATTCATGTCTC+CGG | + | tig0000788:92875-92894 | None:intergenic | 30.0% | |
| TTAGTCATATTTGTAGGCAT+AGG | - | tig0000788:92895-92914 | Msa1336020:intron | 30.0% | |
| GAAAAAGGTAGAAAGAAAGA+GGG | + | tig0000788:93268-93287 | None:intergenic | 30.0% | |
| AGAAAAAGGTAGAAAGAAAG+AGG | + | tig0000788:93269-93288 | None:intergenic | 30.0% | |
| GTAAAGACATTTGTGGAAAA+TGG | - | tig0000788:93436-93455 | Msa1336020:intron | 30.0% | |
| GCAGATATCAATGATGAATT+TGG | - | tig0000788:93475-93494 | Msa1336020:intron | 30.0% | |
| ! | TTTTTCCAATGCAAAAGCTA+CGG | + | tig0000788:93584-93603 | None:intergenic | 30.0% |
| ! | GCTTTTGCATTGGAAAAATA+TGG | - | tig0000788:93586-93605 | Msa1336020:CDS | 30.0% |
| AAATGAATTTGACAACACCA+TGG | - | tig0000788:93687-93706 | Msa1336020:CDS | 30.0% | |
| GATTATACAACATCCAAACA+TGG | - | tig0000788:93838-93857 | Msa1336020:CDS | 30.0% | |
| GTTAATTCAATTTCACCTTC+TGG | - | tig0000788:93916-93935 | Msa1336020:CDS | 30.0% | |
| !! | TTTATGTAGAGCACTGAATA+TGG | - | tig0000788:93954-93973 | Msa1336020:CDS | 30.0% |
| !! | TTATGTAGAGCACTGAATAT+GGG | - | tig0000788:93955-93974 | Msa1336020:CDS | 30.0% |
| ! | ATGACAAAATCTAGGTTGGA+GGG | - | tig0000788:89520-89539 | Msa1336020:CDS | 35.0% |
| GTGAAATTGTTTGCCGAAAA+TGG | - | tig0000788:89592-89611 | Msa1336020:CDS | 35.0% | |
| CGTAAAGTTGCAGATTCAAT+AGG | - | tig0000788:89655-89674 | Msa1336020:intron | 35.0% | |
| CATATCATCATTGTGATGTC+AGG | - | tig0000788:89692-89711 | Msa1336020:intron | 35.0% | |
| GGAATAATAGGCTCTTTATC+TGG | - | tig0000788:89793-89812 | Msa1336020:CDS | 35.0% | |
| ACTATGGCTACAAATGTTGT+TGG | - | tig0000788:89850-89869 | Msa1336020:CDS | 35.0% | |
| !!! | ACGGATTTTTTTAGCAACCA+TGG | + | tig0000788:89908-89927 | None:intergenic | 35.0% |
| ATGGTTGCTAAAAAAATCCG+TGG | - | tig0000788:89907-89926 | Msa1336020:CDS | 35.0% | |
| TAGTGCATATAATCGATCCA+CGG | + | tig0000788:89927-89946 | None:intergenic | 35.0% | |
| TTGTAAGCTATACACGAAAG+AGG | + | tig0000788:90099-90118 | None:intergenic | 35.0% | |
| CTACTAGATTCAACTTCATG+AGG | + | tig0000788:90129-90148 | None:intergenic | 35.0% | |
| !! | TTTGAAGGGTATTGTGTTGA+AGG | - | tig0000788:90164-90183 | Msa1336020:CDS | 35.0% |
| GATGAAGCTGTTTATATCAG+TGG | - | tig0000788:90225-90244 | Msa1336020:CDS | 35.0% | |
| ! | ATGCAATTGGTCTACATATC+AGG | + | tig0000788:90309-90328 | None:intergenic | 35.0% |
| ATGTAGACCAATTGCATGTT+TGG | - | tig0000788:90312-90331 | Msa1336020:intron | 35.0% | |
| CAATTGCATGTTTGGATTAC+CGG | - | tig0000788:90320-90339 | Msa1336020:intron | 35.0% | |
| GCTAACAACAAGCTTAATTG+AGG | + | tig0000788:90571-90590 | None:intergenic | 35.0% | |
| AAGAGAATGTGAGTATAGAG+GGG | + | tig0000788:90651-90670 | None:intergenic | 35.0% | |
| CAAGAGAATGTGAGTATAGA+GGG | + | tig0000788:90652-90671 | None:intergenic | 35.0% | |
| TCAAGAGAATGTGAGTATAG+AGG | + | tig0000788:90653-90672 | None:intergenic | 35.0% | |
| CTTGCAAAACAAGAAATGCA+TGG | + | tig0000788:90701-90720 | None:intergenic | 35.0% | |
| !!! | TTTCTTTTTTTGGTGGTGGT+CGG | - | tig0000788:90890-90909 | Msa1336020:intron | 35.0% |
| GCATAATATATGCAAGGTTC+GGG | + | tig0000788:90925-90944 | None:intergenic | 35.0% | |
| ! | TCTGTCTTTTTCTTGGCTTA+AGG | + | tig0000788:91189-91208 | None:intergenic | 35.0% |
| ! | CAACAGACTATTTCTTTCGA+TGG | + | tig0000788:91258-91277 | None:intergenic | 35.0% |
| ! | TTTTCCATGTATTCGTATGC+TGG | + | tig0000788:91886-91905 | None:intergenic | 35.0% |
| !!! | TATTTTTTTCCTGATGGTCG+GGG | + | tig0000788:92056-92075 | None:intergenic | 35.0% |
| !!! | CTATTTTTTTCCTGATGGTC+GGG | + | tig0000788:92057-92076 | None:intergenic | 35.0% |
| !!! | CCTATTTTTTTCCTGATGGT+CGG | + | tig0000788:92058-92077 | None:intergenic | 35.0% |
| ! | TTAGAGCATGTCATTTCAAG+TGG | + | tig0000788:92137-92156 | None:intergenic | 35.0% |
| TAACTAGTCGTCCAAAACTA+GGG | - | tig0000788:92154-92173 | Msa1336020:intron | 35.0% | |
| !! | ATATCAAAGTGCCCTAGTTT+TGG | + | tig0000788:92168-92187 | None:intergenic | 35.0% |
| CAAACTAGGATAGGATAGAT+TGG | - | tig0000788:92196-92215 | Msa1336020:intron | 35.0% | |
| GATGGGAAATAATAAGAGTC+TGG | + | tig0000788:92272-92291 | None:intergenic | 35.0% | |
| GAAGAAGAAGAAAAAGGTGA+CGG | + | tig0000788:92515-92534 | None:intergenic | 35.0% | |
| ! | TCTTCTTCTTCTTTTCAGAG+AGG | - | tig0000788:92527-92546 | Msa1336020:intron | 35.0% |
| ! | TCTTTTCAGAGAGGTGATTT+AGG | - | tig0000788:92536-92555 | Msa1336020:intron | 35.0% |
| ! | CTTTTCAGAGAGGTGATTTA+GGG | - | tig0000788:92537-92556 | Msa1336020:intron | 35.0% |
| !!! | GGTGATTTTTGGGTCAAAAT+TGG | + | tig0000788:92563-92582 | None:intergenic | 35.0% |
| TAGAAGGAAAACAATTCGGA+GGG | + | tig0000788:92585-92604 | None:intergenic | 35.0% | |
| ATAGAAGGAAAACAATTCGG+AGG | + | tig0000788:92586-92605 | None:intergenic | 35.0% | |
| AAAAACACACCACACAAAGA+CGG | + | tig0000788:92726-92745 | None:intergenic | 35.0% | |
| AAATAAACACCGCACTAAGA+CGG | + | tig0000788:92755-92774 | None:intergenic | 35.0% | |
| CCAAAGTCATTGTCATTGAT+CGG | + | tig0000788:92816-92835 | None:intergenic | 35.0% | |
| !! | GCCGTTTTATGCTATTAACA+TGG | - | tig0000788:92924-92943 | Msa1336020:intron | 35.0% |
| AAGGTTGAGAACTCAAAGAA+AGG | - | tig0000788:93186-93205 | Msa1336020:intron | 35.0% | |
| AGGTTGAGAACTCAAAGAAA+GGG | - | tig0000788:93187-93206 | Msa1336020:intron | 35.0% | |
| AGAGACAGTAAAGACATTTG+TGG | - | tig0000788:93429-93448 | Msa1336020:intron | 35.0% | |
| ACCAAGTTGCAACTTCAATT+GGG | - | tig0000788:93500-93519 | Msa1336020:CDS | 35.0% | |
| GAGAGATGAAAAACAAGTTG+AGG | - | tig0000788:93555-93574 | Msa1336020:CDS | 35.0% | |
| ATTGCTGAACATGATGTCTA+AGG | + | tig0000788:93614-93633 | None:intergenic | 35.0% | |
| ACATCATGTTCAGCAATGTT+GGG | - | tig0000788:93617-93636 | Msa1336020:CDS | 35.0% | |
| ! | ATGGTGGAAAGAAAAATTCG+TGG | - | tig0000788:93760-93779 | Msa1336020:CDS | 35.0% |
| !! | ACATCCAAACATGGTCTTAT+AGG | - | tig0000788:93847-93866 | Msa1336020:CDS | 35.0% |
| TTCAGTGCTCTACATAAAAG+AGG | + | tig0000788:93952-93971 | None:intergenic | 35.0% | |
| !! | TATGTAGAGCACTGAATATG+GGG | - | tig0000788:93956-93975 | Msa1336020:CDS | 35.0% |
| TGAGTGAAGTTGAAGCTATT+GGG | - | tig0000788:93981-94000 | Msa1336020:CDS | 35.0% | |
| GTTTCTTGCTTCTGATGAAT+CGG | - | tig0000788:94066-94085 | Msa1336020:CDS | 35.0% | |
| ! | GATGAATCGGCTTATATTAG+TGG | - | tig0000788:94079-94098 | Msa1336020:CDS | 35.0% |
| ! | TATTAGTGGACAAAACTTGG+TGG | - | tig0000788:94093-94112 | Msa1336020:CDS | 35.0% |
| !!! | TAGCTTGTTTTTTACGCCAT+CGG | + | tig0000788:94144-94163 | None:intergenic | 35.0% |
| ! | AAAATCTAGGTTGGAGGGTA+AGG | - | tig0000788:89525-89544 | Msa1336020:CDS | 40.0% |
| GGTAAGGTGGCAATAATAAC+AGG | - | tig0000788:89541-89560 | Msa1336020:CDS | 40.0% | |
| TGTTTCTTCACCAATTCCAC+TGG | + | tig0000788:89572-89591 | None:intergenic | 40.0% | |
| TGATGTCAGGGATGAAAAAC+AGG | - | tig0000788:89705-89724 | Msa1336020:intron | 40.0% | |
| AAATCAGCTTGTGGAGAACT+TGG | - | tig0000788:90024-90043 | Msa1336020:CDS | 40.0% | |
| GGTCATAACTTGGTTGTTGA+TGG | - | tig0000788:90246-90265 | Msa1336020:CDS | 40.0% | |
| ! | CATAACTTGGTTGTTGATGG+TGG | - | tig0000788:90249-90268 | Msa1336020:CDS | 40.0% |
| ! | AGATGGAGTATTACGAACCA+CGG | + | tig0000788:90280-90299 | None:intergenic | 40.0% |
| CGGTAATCCAAACATGCAAT+TGG | + | tig0000788:90322-90341 | None:intergenic | 40.0% | |
| ! | CCTTTTGTCCGCAAAACATT+AGG | + | tig0000788:90447-90466 | None:intergenic | 40.0% |
| ! | CCTAATGTTTTGCGGACAAA+AGG | - | tig0000788:90444-90463 | Msa1336020:intron | 40.0% |
| ! | GTTTTGCGGACAAAAGGTTA+TGG | - | tig0000788:90450-90469 | Msa1336020:intron | 40.0% |
| AGAAATGCATGGCACAAGAT+GGG | + | tig0000788:90690-90709 | None:intergenic | 40.0% | |
| AAGAAATGCATGGCACAAGA+TGG | + | tig0000788:90691-90710 | None:intergenic | 40.0% | |
| GTCGTTCTTAATTTCGGATG+TGG | + | tig0000788:90754-90773 | None:intergenic | 40.0% | |
| AAACTCAACTTGACCACGTA+CGG | - | tig0000788:90837-90856 | Msa1336020:intron | 40.0% | |
| !!! | TTCTTTTTTTGGTGGTGGTC+GGG | - | tig0000788:90891-90910 | Msa1336020:intron | 40.0% |
| GCTAAGGCAACACTAAAAAG+CGG | + | tig0000788:91231-91250 | None:intergenic | 40.0% | |
| TTCTTTCGATGGTTGAGCTA+AGG | + | tig0000788:91247-91266 | None:intergenic | 40.0% | |
| CCGACCATCAGGAAAAAAAT+AGG | - | tig0000788:92055-92074 | Msa1336020:intron | 40.0% | |
| CTAACTAGTCGTCCAAAACT+AGG | - | tig0000788:92153-92172 | Msa1336020:intron | 40.0% | |
| ! | AATTCGGAGGGGTGATTTTT+GGG | + | tig0000788:92573-92592 | None:intergenic | 40.0% |
| AGAAGGAAAACAATTCGGAG+GGG | + | tig0000788:92584-92603 | None:intergenic | 40.0% | |
| ! | TTTGATTTCCCGTCTTTGTG+TGG | - | tig0000788:92714-92733 | Msa1336020:intron | 40.0% |
| AAAACACACCACACAAAGAC+GGG | + | tig0000788:92725-92744 | None:intergenic | 40.0% | |
| ! | TTTGATTTCCCGTCTTAGTG+CGG | - | tig0000788:92743-92762 | Msa1336020:intron | 40.0% |
| AATAAACACCGCACTAAGAC+GGG | + | tig0000788:92754-92773 | None:intergenic | 40.0% | |
| GTGCGGTGTTTATTTGATTC+AGG | - | tig0000788:92760-92779 | Msa1336020:intron | 40.0% | |
| CCGATCAATGACAATGACTT+TGG | - | tig0000788:92813-92832 | Msa1336020:intron | 40.0% | |
| !! | TTTTCATAGGTTGGAGGGTA+AGG | - | tig0000788:93369-93388 | Msa1336020:intron | 40.0% |
| CAATTGAAGTTGCAACTTGG+TGG | + | tig0000788:93501-93520 | None:intergenic | 40.0% | |
| CACCAAGTTGCAACTTCAAT+TGG | - | tig0000788:93499-93518 | Msa1336020:CDS | 40.0% | |
| ACCCAATTGAAGTTGCAACT+TGG | + | tig0000788:93504-93523 | None:intergenic | 40.0% | |
| TTTCATCTCTCACGTCACAA+TGG | + | tig0000788:93546-93565 | None:intergenic | 40.0% | |
| GACATCATGTTCAGCAATGT+TGG | - | tig0000788:93616-93635 | Msa1336020:CDS | 40.0% | |
| ATGTTCAGCAATGTTGGGAT+TGG | - | tig0000788:93622-93641 | Msa1336020:CDS | 40.0% | |
| AGCTGATCCACGAACATTAA+TGG | + | tig0000788:93713-93732 | None:intergenic | 40.0% | |
| ! | TCGTGGATCCATAATTTGCA+CGG | - | tig0000788:93777-93796 | Msa1336020:CDS | 40.0% |
| AAGGCCTATAAGACCATGTT+TGG | + | tig0000788:93854-93873 | None:intergenic | 40.0% | |
| TGCTCTACATAAAAGAGGTG+TGG | + | tig0000788:93947-93966 | None:intergenic | 40.0% | |
| !! | ATGTAGAGCACTGAATATGG+GGG | - | tig0000788:93957-93976 | Msa1336020:CDS | 40.0% |
| GTGAGTGAAGTTGAAGCTAT+TGG | - | tig0000788:93980-93999 | Msa1336020:CDS | 40.0% | |
| ATAATAACAGGTGCAGCCAG+TGG | - | tig0000788:89553-89572 | Msa1336020:CDS | 45.0% | |
| ACTAGCGTTGCAGCTTCTAT+TGG | - | tig0000788:89946-89965 | Msa1336020:CDS | 45.0% | |
| ATTGGTGGAACAGGTCCTAA+TGG | - | tig0000788:89964-89983 | Msa1336020:CDS | 45.0% | |
| GGACTTGTGAAATCAGCTTG+TGG | - | tig0000788:90015-90034 | Msa1336020:CDS | 45.0% | |
| ! | TGTGGAGAACTTGGTGGTTA+TGG | - | tig0000788:90033-90052 | Msa1336020:CDS | 45.0% |
| ! | AGGTGTTGCAACTCCAAAAG+GGG | + | tig0000788:90079-90098 | None:intergenic | 45.0% |
| !! | GAGGTGTTGCAACTCCAAAA+GGG | + | tig0000788:90080-90099 | None:intergenic | 45.0% |
| !! | AGAGGTGTTGCAACTCCAAA+AGG | + | tig0000788:90081-90100 | None:intergenic | 45.0% |
| ! | TACATATCAGGCGTTGCAGA+TGG | + | tig0000788:90297-90316 | None:intergenic | 45.0% |
| !!! | TCTTTTTTTGGTGGTGGTCG+GGG | - | tig0000788:90892-90911 | Msa1336020:intron | 45.0% |
| AGTGTAACTGAAGGCGAAAG+TGG | - | tig0000788:91154-91173 | Msa1336020:intron | 45.0% | |
| GTGTAACTGAAGGCGAAAGT+GGG | - | tig0000788:91155-91174 | Msa1336020:intron | 45.0% | |
| GTTGCCAGCATACGAATACA+TGG | - | tig0000788:91879-91898 | Msa1336020:intron | 45.0% | |
| TTCAAGTGGCACACTTGTGA+AGG | + | tig0000788:92123-92142 | None:intergenic | 45.0% | |
| ! | GAAGAAAAAGGTGACGGCTA+GGG | + | tig0000788:92509-92528 | None:intergenic | 45.0% |
| ! | AGAAGAAAAAGGTGACGGCT+AGG | + | tig0000788:92510-92529 | None:intergenic | 45.0% |
| ! | CAATTCGGAGGGGTGATTTT+TGG | + | tig0000788:92574-92593 | None:intergenic | 45.0% |
| ATCCGGAGACATGAGTATTC+CGG | - | tig0000788:92853-92872 | Msa1336020:intron | 45.0% | |
| GGTAAGGTTGCTATAGTGAC+TGG | - | tig0000788:93385-93404 | Msa1336020:intron | 45.0% | |
| AAGGTTGCTATAGTGACTGG+TGG | - | tig0000788:93388-93407 | Msa1336020:intron | 45.0% | |
| ! | GGAAACCGTAGCTTTTGCAT+TGG | - | tig0000788:93576-93595 | Msa1336020:CDS | 45.0% |
| TTCAGCAATGTTGGGATTGG+AGG | - | tig0000788:93625-93644 | Msa1336020:CDS | 45.0% | |
| ACCATGGCCATTAATGTTCG+TGG | - | tig0000788:93703-93722 | Msa1336020:CDS | 45.0% | |
| TCCACGAACATTAATGGCCA+TGG | + | tig0000788:93707-93726 | None:intergenic | 45.0% | |
| !! | TGTAGAGCACTGAATATGGG+GGG | - | tig0000788:93958-93977 | Msa1336020:CDS | 45.0% |
| ! | ATCTAGGTTGGAGGGTAAGG+TGG | - | tig0000788:89528-89547 | Msa1336020:CDS | 50.0% |
| AGCGTTGCAGCTTCTATTGG+TGG | - | tig0000788:89949-89968 | Msa1336020:CDS | 50.0% | |
| GCAGCTTCTATTGGTGGAAC+AGG | - | tig0000788:89955-89974 | Msa1336020:CDS | 50.0% | |
| TCAGCTTGTGGAGAACTTGG+TGG | - | tig0000788:90027-90046 | Msa1336020:CDS | 50.0% | |
| !! | TGTTGATGGTGGTTTCTCCG+TGG | - | tig0000788:90260-90279 | Msa1336020:CDS | 50.0% |
| AGAACGACAAACACCGAGAG+AGG | - | tig0000788:90766-90785 | Msa1336020:intron | 50.0% | |
| GAACGACAAACACCGAGAGA+GGG | - | tig0000788:90767-90786 | Msa1336020:intron | 50.0% | |
| AACGACAAACACCGAGAGAG+GGG | - | tig0000788:90768-90787 | Msa1336020:intron | 50.0% | |
| TTCCAGCATTACACCGTACG+TGG | + | tig0000788:90853-90872 | None:intergenic | 50.0% | |
| ATCTCGCACAAGACGTGCAA+AGG | - | tig0000788:91008-91027 | Msa1336020:intron | 50.0% | |
| TCAGTTACACTGAGTGGTGG+CGG | + | tig0000788:91145-91164 | None:intergenic | 50.0% | |
| CCTTCAGTTACACTGAGTGG+TGG | + | tig0000788:91148-91167 | None:intergenic | 50.0% | |
| CCACCACTCAGTGTAACTGA+AGG | - | tig0000788:91145-91164 | Msa1336020:intron | 50.0% | |
| TCGCCTTCAGTTACACTGAG+TGG | + | tig0000788:91151-91170 | None:intergenic | 50.0% | |
| GTGACGGCTAGGGTTTAAGA+AGG | + | tig0000788:92499-92518 | None:intergenic | 50.0% | |
| CTCCGGAATACTCATGTCTC+CGG | + | tig0000788:92858-92877 | None:intergenic | 50.0% | |
| ATAGTGACTGGTGGAGCAAG+CGG | - | tig0000788:93397-93416 | Msa1336020:intron | 50.0% | |
| CATCTCTCACGTCACAATGG+TGG | + | tig0000788:93543-93562 | None:intergenic | 50.0% | |
| CACACTGGCCGTGCAAATTA+TGG | + | tig0000788:93788-93807 | None:intergenic | 50.0% | |
| ! | CATAATTTGCACGGCCAGTG+TGG | - | tig0000788:93786-93805 | Msa1336020:CDS | 50.0% |
| TGCAGTGAGCTTGGAGCTTA+TGG | - | tig0000788:93886-93905 | Msa1336020:CDS | 50.0% | |
| ! | GGACAAAACTTGGTGGTCGA+TGG | - | tig0000788:94100-94119 | Msa1336020:CDS | 50.0% |
| ! | CAAAACTTGGTGGTCGATGG+AGG | - | tig0000788:94103-94122 | Msa1336020:CDS | 50.0% |
| GCTTCACTGTCGTAAACCGA+TGG | - | tig0000788:94125-94144 | Msa1336020:CDS | 50.0% | |
| ACAGGTGCAGCCAGTGGAAT+TGG | - | tig0000788:89559-89578 | Msa1336020:CDS | 55.0% | |
| ! | CATCTCTGGTTCCCCTCTCT+CGG | + | tig0000788:90782-90801 | None:intergenic | 55.0% |
| GACCACGTACGGTGTAATGC+TGG | - | tig0000788:90848-90867 | Msa1336020:intron | 55.0% | |
| GGGTTTAAACCCCGACCATC+AGG | - | tig0000788:92044-92063 | Msa1336020:intron | 55.0% | |
| CGTCGTCAACGTTGCAGATC+CGG | - | tig0000788:92836-92855 | Msa1336020:intron | 55.0% | |
| ACTGGTGGAGCAAGCGGAAT+AGG | - | tig0000788:93403-93422 | Msa1336020:intron | 55.0% | |
| ! | AGAGGTGTGGCAACTCCAGA+AGG | + | tig0000788:93934-93953 | None:intergenic | 55.0% |
| CAAGCACGCTGCGCGTGTTA+TGG | - | tig0000788:93741-93760 | Msa1336020:CDS | 60.0% | |
| ATTTGCACGGCCAGTGTGGC+TGG | - | tig0000788:93790-93809 | Msa1336020:CDS | 60.0% | |
| AGCAACACAGCCAGCCACAC+TGG | + | tig0000788:93803-93822 | None:intergenic | 60.0% | |
| ! | AGTGTGGCTGGCTGTGTTGC+TGG | - | tig0000788:93802-93821 | Msa1336020:CDS | 60.0% |
| ! | GGCTGTGTTGCTGGATGTGC+AGG | - | tig0000788:93811-93830 | Msa1336020:CDS | 60.0% |
| CACTGCACGTCGAGCGAACA+AGG | + | tig0000788:93873-93892 | None:intergenic | 60.0% | |
| TAAGCATGCTGCGCGCGCCA+TGG | - | tig0000788:89888-89907 | Msa1336020:CDS | 65.0% | |
| GCACGCTGCGCGTGTTATGG+TGG | - | tig0000788:93744-93763 | Msa1336020:CDS | 65.0% | |
| CGCTCGACGTGCAGTGAGCT+TGG | - | tig0000788:93877-93896 | Msa1336020:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0000788 | gene | 89520 | 94168 | 89520 | ID=Msa1336020;Name=Msa1336020 |
| tig0000788 | mRNA | 89520 | 94168 | 89520 | ID=Msa1336020-mRNA-1;Parent=Msa1336020;Name=Msa1336020-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|1|1|3|0|468 |
| tig0000788 | exon | 93477 | 94168 | 93477 | ID=Msa1336020-mRNA-1:exon:514;Parent=Msa1336020-mRNA-1 |
| tig0000788 | exon | 89709 | 90310 | 89709 | ID=Msa1336020-mRNA-1:exon:513;Parent=Msa1336020-mRNA-1 |
| tig0000788 | exon | 89520 | 89632 | 89520 | ID=Msa1336020-mRNA-1:exon:512;Parent=Msa1336020-mRNA-1 |
| tig0000788 | CDS | 93477 | 94168 | 93477 | ID=Msa1336020-mRNA-1:cds;Parent=Msa1336020-mRNA-1 |
| tig0000788 | CDS | 89709 | 90310 | 89709 | ID=Msa1336020-mRNA-1:cds;Parent=Msa1336020-mRNA-1 |
| tig0000788 | CDS | 89520 | 89632 | 89520 | ID=Msa1336020-mRNA-1:cds;Parent=Msa1336020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
