Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0006480 | sp|Q8W4E6|HPAT1_ARATH | 81.421 | 366 | 62 | 3 | 1 | 360 | 1 | 366 | 0.0 | 602 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004180 | Msa0006480 | -0.806374 | 8.483930e-50 | -8.615850e-47 |
| Msa0006480 | Msa0011410 | -0.804775 | 1.836958e-49 | -8.615850e-47 |
| Msa0006480 | Msa0011440 | -0.801560 | 8.500353e-49 | -8.615850e-47 |
| Msa0006480 | Msa0017300 | -0.819812 | 9.541202e-53 | -8.615850e-47 |
| Msa0006480 | Msa0025570 | 0.827470 | 1.537095e-54 | -8.615850e-47 |
| Msa0006480 | Msa0027020 | -0.800439 | 1.440499e-48 | -8.615850e-47 |
| Msa0006480 | Msa0039750 | 0.805691 | 1.181313e-49 | -8.615850e-47 |
| Msa0006480 | Msa0046020 | -0.802871 | 4.566951e-49 | -8.615850e-47 |
| Msa0006480 | Msa0050310 | -0.804966 | 1.676329e-49 | -8.615850e-47 |
| Msa0006480 | Msa0065670 | -0.805969 | 1.032470e-49 | -8.615850e-47 |
| Msa0006480 | Msa0073110 | 0.819720 | 1.001639e-52 | -8.615850e-47 |
| Msa0006480 | Msa0074690 | 0.801483 | 8.814232e-49 | -8.615850e-47 |
| Msa0006480 | Msa0078160 | -0.801273 | 9.734195e-49 | -8.615850e-47 |
| Msa0006480 | Msa0100540 | 0.984932 | 5.086324e-162 | -8.615850e-47 |
| Msa0006480 | Msa0101530 | 0.858814 | 6.363524e-63 | -8.615850e-47 |
| Msa0006480 | Msa0105140 | -0.808988 | 2.362437e-50 | -8.615850e-47 |
| Msa0006480 | Msa0117650 | 0.801284 | 9.682826e-49 | -8.615850e-47 |
| Msa0006480 | Msa0121320 | 0.806294 | 8.820396e-50 | -8.615850e-47 |
| Msa0006480 | Msa0127350 | -0.820016 | 8.569281e-53 | -8.615850e-47 |
| Msa0006480 | Msa0129820 | -0.801287 | 9.668826e-49 | -8.615850e-47 |
| Msa0006480 | Msa0140870 | -0.805641 | 1.210433e-49 | -8.615850e-47 |
| Msa0006480 | Msa0141410 | 0.821676 | 3.558036e-53 | -8.615850e-47 |
| Msa0006480 | Msa0145050 | 0.802689 | 4.979602e-49 | -8.615850e-47 |
| Msa0006480 | Msa0145990 | -0.802147 | 6.438514e-49 | -8.615850e-47 |
| Msa0006480 | Msa0148960 | 0.956110 | 6.365633e-114 | -8.615850e-47 |
| Msa0006480 | Msa0150640 | 0.800510 | 1.393113e-48 | -8.615850e-47 |
| Msa0006480 | Msa0151380 | -0.809600 | 1.746229e-50 | -8.615850e-47 |
| Msa0006480 | Msa0158890 | -0.825917 | 3.609513e-54 | -8.615850e-47 |
| Msa0006480 | Msa0166180 | 0.803169 | 3.963569e-49 | -8.615850e-47 |
| Msa0006480 | Msa0167160 | -0.806603 | 7.592847e-50 | -8.615850e-47 |
| Msa0006480 | Msa0175240 | -0.813714 | 2.225927e-51 | -8.615850e-47 |
| Msa0006480 | Msa0186240 | 0.801247 | 9.851414e-49 | -8.615850e-47 |
| Msa0006480 | Msa0186400 | -0.823730 | 1.183175e-53 | -8.615850e-47 |
| Msa0006480 | Msa0216150 | -0.805056 | 1.604704e-49 | -8.615850e-47 |
| Msa0006480 | Msa0225070 | -0.803903 | 2.792043e-49 | -8.615850e-47 |
| Msa0006480 | Msa0229350 | -0.818055 | 2.393370e-52 | -8.615850e-47 |
| Msa0006480 | Msa0234150 | 0.832626 | 8.492238e-56 | -8.615850e-47 |
| Msa0006480 | Msa0236690 | -0.807649 | 4.558381e-50 | -8.615850e-47 |
| Msa0006480 | Msa0238140 | 0.819596 | 1.069022e-52 | -8.615850e-47 |
| Msa0006480 | Msa0242720 | 0.835689 | 1.450013e-56 | -8.615850e-47 |
| Msa0006480 | Msa0253230 | -0.805668 | 1.194331e-49 | -8.615850e-47 |
| Msa0006480 | Msa0256920 | 0.801766 | 7.712494e-49 | -8.615850e-47 |
| Msa0006480 | Msa0265650 | 0.821906 | 3.147101e-53 | -8.615850e-47 |
| Msa0006480 | Msa0266140 | -0.817026 | 4.081754e-52 | -8.615850e-47 |
| Msa0006480 | Msa0267450 | -0.813968 | 1.956381e-51 | -8.615850e-47 |
| Msa0006480 | Msa0267510 | -0.815131 | 1.081958e-51 | -8.615850e-47 |
| Msa0006480 | Msa0270730 | -0.809229 | 2.098126e-50 | -8.615850e-47 |
| Msa0006480 | Msa0271700 | 0.811285 | 7.556196e-51 | -8.615850e-47 |
| Msa0006480 | Msa0271720 | 0.820764 | 5.773488e-53 | -8.615850e-47 |
| Msa0006480 | Msa0279810 | 0.802974 | 4.348392e-49 | -8.615850e-47 |
| Msa0006480 | Msa0286360 | 0.820719 | 5.910879e-53 | -8.615850e-47 |
| Msa0006480 | Msa0287480 | 0.831598 | 1.524373e-55 | -8.615850e-47 |
| Msa0006480 | Msa0292060 | -0.805993 | 1.020575e-49 | -8.615850e-47 |
| Msa0006480 | Msa0304060 | -0.810131 | 1.342803e-50 | -8.615850e-47 |
| Msa0006480 | Msa0318490 | 0.805265 | 1.450887e-49 | -8.615850e-47 |
| Msa0006480 | Msa0320170 | 0.804947 | 1.691073e-49 | -8.615850e-47 |
| Msa0006480 | Msa0326170 | -0.824107 | 9.656154e-54 | -8.615850e-47 |
| Msa0006480 | Msa0331070 | -0.834078 | 3.690040e-56 | -8.615850e-47 |
| Msa0006480 | Msa0336550 | -0.807139 | 5.849166e-50 | -8.615850e-47 |
| Msa0006480 | Msa0340700 | -0.811942 | 5.440006e-51 | -8.615850e-47 |
| Msa0006480 | Msa0364030 | -0.821940 | 3.091235e-53 | -8.615850e-47 |
| Msa0006480 | Msa0364910 | -0.811080 | 8.373149e-51 | -8.615850e-47 |
| Msa0006480 | Msa0378320 | 0.817421 | 3.326374e-52 | -8.615850e-47 |
| Msa0006480 | Msa0386880 | 0.801935 | 7.118803e-49 | -8.615850e-47 |
| Msa0006480 | Msa0387630 | -0.802125 | 6.505967e-49 | -8.615850e-47 |
| Msa0006480 | Msa0388210 | 0.808817 | 2.570434e-50 | -8.615850e-47 |
| Msa0006480 | Msa0403740 | -0.821832 | 3.274138e-53 | -8.615850e-47 |
| Msa0006480 | Msa0412580 | -0.843350 | 1.478736e-58 | -8.615850e-47 |
| Msa0006480 | Msa0419150 | -0.816855 | 4.459702e-52 | -8.615850e-47 |
| Msa0006480 | Msa0427660 | 0.805838 | 1.100023e-49 | -8.615850e-47 |
| Msa0006480 | Msa0428270 | -0.804814 | 1.802786e-49 | -8.615850e-47 |
| Msa0006480 | Msa0428720 | -0.803681 | 3.104167e-49 | -8.615850e-47 |
| Msa0006480 | Msa0431270 | -0.806896 | 6.582787e-50 | -8.615850e-47 |
| Msa0006480 | Msa0434300 | 0.808377 | 3.191513e-50 | -8.615850e-47 |
| Msa0006480 | Msa0437820 | -0.801857 | 7.386641e-49 | -8.615850e-47 |
| Msa0006480 | Msa0441750 | 0.803420 | 3.516395e-49 | -8.615850e-47 |
| Msa0006480 | Msa0456450 | -0.822056 | 2.904785e-53 | -8.615850e-47 |
| Msa0006480 | Msa0457070 | -0.839639 | 1.404578e-57 | -8.615850e-47 |
| Msa0006480 | Msa0464980 | -0.811175 | 7.985555e-51 | -8.615850e-47 |
| Msa0006480 | Msa0474660 | -0.802662 | 5.044138e-49 | -8.615850e-47 |
| Msa0006480 | Msa0480900 | -0.817932 | 2.551824e-52 | -8.615850e-47 |
| Msa0006480 | Msa0484590 | -0.802491 | 5.471531e-49 | -8.615850e-47 |
| Msa0006480 | Msa0522140 | 0.821691 | 3.529970e-53 | -8.615850e-47 |
| Msa0006480 | Msa0522170 | 0.805971 | 1.031569e-49 | -8.615850e-47 |
| Msa0006480 | Msa0523420 | -0.817532 | 3.140005e-52 | -8.615850e-47 |
| Msa0006480 | Msa0525180 | -0.820887 | 5.409388e-53 | -8.615850e-47 |
| Msa0006480 | Msa0531050 | 0.814278 | 1.671190e-51 | -8.615850e-47 |
| Msa0006480 | Msa0536970 | -0.808226 | 3.436357e-50 | -8.615850e-47 |
| Msa0006480 | Msa0548420 | 0.805839 | 1.099511e-49 | -8.615850e-47 |
| Msa0006480 | Msa0550980 | -0.806929 | 6.478662e-50 | -8.615850e-47 |
| Msa0006480 | Msa0557240 | 0.809219 | 2.108223e-50 | -8.615850e-47 |
| Msa0006480 | Msa0557250 | 0.823599 | 1.270093e-53 | -8.615850e-47 |
| Msa0006480 | Msa0557440 | -0.815296 | 9.943823e-52 | -8.615850e-47 |
| Msa0006480 | Msa0560950 | 0.802938 | 4.424745e-49 | -8.615850e-47 |
| Msa0006480 | Msa0566280 | 0.800676 | 1.288896e-48 | -8.615850e-47 |
| Msa0006480 | Msa0572730 | -0.816525 | 5.287892e-52 | -8.615850e-47 |
| Msa0006480 | Msa0580410 | -0.809874 | 1.525199e-50 | -8.615850e-47 |
| Msa0006480 | Msa0580890 | -0.819669 | 1.028509e-52 | -8.615850e-47 |
| Msa0006480 | Msa0581350 | 0.801508 | 8.711424e-49 | -8.615850e-47 |
| Msa0006480 | Msa0582270 | -0.815970 | 7.037319e-52 | -8.615850e-47 |
| Msa0006480 | Msa0583270 | -0.823454 | 1.373225e-53 | -8.615850e-47 |
| Msa0006480 | Msa0588040 | 0.832250 | 1.052263e-55 | -8.615850e-47 |
| Msa0006480 | Msa0590620 | -0.859543 | 3.846639e-63 | -8.615850e-47 |
| Msa0006480 | Msa0597370 | -0.829434 | 5.158342e-55 | -8.615850e-47 |
| Msa0006480 | Msa0601380 | 0.809463 | 1.868879e-50 | -8.615850e-47 |
| Msa0006480 | Msa0603310 | 0.851230 | 1.016075e-60 | -8.615850e-47 |
| Msa0006480 | Msa0606340 | -0.804479 | 2.117674e-49 | -8.615850e-47 |
| Msa0006480 | Msa0615070 | 0.825995 | 3.458639e-54 | -8.615850e-47 |
| Msa0006480 | Msa0616890 | -0.838745 | 2.395279e-57 | -8.615850e-47 |
| Msa0006480 | Msa0622800 | -0.801818 | 7.523258e-49 | -8.615850e-47 |
| Msa0006480 | Msa0634900 | -0.803822 | 2.901800e-49 | -8.615850e-47 |
| Msa0006480 | Msa0638300 | -0.812687 | 3.739591e-51 | -8.615850e-47 |
| Msa0006480 | Msa0644330 | 0.831892 | 1.290347e-55 | -8.615850e-47 |
| Msa0006480 | Msa0644340 | 0.812343 | 4.446025e-51 | -8.615850e-47 |
| Msa0006480 | Msa0654500 | -0.803115 | 4.065556e-49 | -8.615850e-47 |
| Msa0006480 | Msa0661540 | -0.801774 | 7.682701e-49 | -8.615850e-47 |
| Msa0006480 | Msa0676570 | -0.854788 | 9.744323e-62 | -8.615850e-47 |
| Msa0006480 | Msa0682110 | 0.805472 | 1.313339e-49 | -8.615850e-47 |
| Msa0006480 | Msa0682160 | 0.804815 | 1.802589e-49 | -8.615850e-47 |
| Msa0006480 | Msa0688880 | -0.813433 | 2.566234e-51 | -8.615850e-47 |
| Msa0006480 | Msa0690100 | -0.816008 | 6.898410e-52 | -8.615850e-47 |
| Msa0006480 | Msa0695250 | -0.812530 | 4.048047e-51 | -8.615850e-47 |
| Msa0006480 | Msa0699170 | 0.801453 | 8.940801e-49 | -8.615850e-47 |
| Msa0006480 | Msa0701800 | -0.833696 | 4.597251e-56 | -8.615850e-47 |
| Msa0006480 | Msa0707330 | 0.805151 | 1.532903e-49 | -8.615850e-47 |
| Msa0006480 | Msa0707860 | -0.800487 | 1.408517e-48 | -8.615850e-47 |
| Msa0006480 | Msa0715040 | 0.823299 | 1.492303e-53 | -8.615850e-47 |
| Msa0006480 | Msa0729740 | -0.806481 | 8.057167e-50 | -8.615850e-47 |
| Msa0006480 | Msa0731580 | 0.804481 | 2.116232e-49 | -8.615850e-47 |
| Msa0006480 | Msa0736920 | 0.810999 | 8.717534e-51 | -8.615850e-47 |
| Msa0006480 | Msa0742370 | -0.825265 | 5.149544e-54 | -8.615850e-47 |
| Msa0006480 | Msa0744710 | 0.800340 | 1.508764e-48 | -8.615850e-47 |
| Msa0006480 | Msa0750490 | -0.820370 | 7.109788e-53 | -8.615850e-47 |
| Msa0006480 | Msa0778570 | 0.812280 | 4.591047e-51 | -8.615850e-47 |
| Msa0006480 | Msa0779450 | -0.812054 | 5.142482e-51 | -8.615850e-47 |
| Msa0006480 | Msa0790650 | -0.804560 | 2.037276e-49 | -8.615850e-47 |
| Msa0006480 | Msa0793130 | -0.804380 | 2.221249e-49 | -8.615850e-47 |
| Msa0006480 | Msa0795460 | 0.801292 | 9.646225e-49 | -8.615850e-47 |
| Msa0006480 | Msa0795910 | -0.809174 | 2.155213e-50 | -8.615850e-47 |
| Msa0006480 | Msa0809920 | 0.810860 | 9.344207e-51 | -8.615850e-47 |
| Msa0006480 | Msa0815940 | 0.804582 | 2.015896e-49 | -8.615850e-47 |
| Msa0006480 | Msa0823480 | -0.806070 | 9.832912e-50 | -8.615850e-47 |
| Msa0006480 | Msa0826240 | 0.801750 | 7.772269e-49 | -8.615850e-47 |
| Msa0006480 | Msa0829250 | -0.814660 | 1.376143e-51 | -8.615850e-47 |
| Msa0006480 | Msa0833360 | -0.806195 | 9.256088e-50 | -8.615850e-47 |
| Msa0006480 | Msa0862480 | -0.814822 | 1.266687e-51 | -8.615850e-47 |
| Msa0006480 | Msa0901270 | 0.837448 | 5.166266e-57 | -8.615850e-47 |
| Msa0006480 | Msa0901290 | 0.810185 | 1.306963e-50 | -8.615850e-47 |
| Msa0006480 | Msa0905570 | 0.808303 | 3.309537e-50 | -8.615850e-47 |
| Msa0006480 | Msa0945160 | -0.811682 | 6.195475e-51 | -8.615850e-47 |
| Msa0006480 | Msa0956600 | -0.800481 | 1.412685e-48 | -8.615850e-47 |
| Msa0006480 | Msa0964400 | -0.812686 | 3.741867e-51 | -8.615850e-47 |
| Msa0006480 | Msa0971780 | -0.803546 | 3.310623e-49 | -8.615850e-47 |
| Msa0006480 | Msa1001120 | 0.846899 | 1.625679e-59 | -8.615850e-47 |
| Msa0006480 | Msa1002550 | -0.811903 | 5.547582e-51 | -8.615850e-47 |
| Msa0006480 | Msa1002820 | 0.800124 | 1.669429e-48 | -8.615850e-47 |
| Msa0006480 | Msa1014550 | -0.803370 | 3.601249e-49 | -8.615850e-47 |
| Msa0006480 | Msa1015360 | 0.860772 | 1.636426e-63 | -8.615850e-47 |
| Msa0006480 | Msa1022420 | 0.805122 | 1.554819e-49 | -8.615850e-47 |
| Msa0006480 | Msa1025440 | -0.804741 | 1.867610e-49 | -8.615850e-47 |
| Msa0006480 | Msa1032480 | 0.801996 | 6.918290e-49 | -8.615850e-47 |
| Msa0006480 | Msa1034950 | 0.800683 | 1.284907e-48 | -8.615850e-47 |
| Msa0006480 | Msa1035050 | 0.805349 | 1.393535e-49 | -8.615850e-47 |
| Msa0006480 | Msa1036260 | -0.809798 | 1.583132e-50 | -8.615850e-47 |
| Msa0006480 | Msa1039150 | -0.816083 | 6.639807e-52 | -8.615850e-47 |
| Msa0006480 | Msa1075090 | 0.817824 | 2.698986e-52 | -8.615850e-47 |
| Msa0006480 | Msa1077970 | 0.810865 | 9.317685e-51 | -8.615850e-47 |
| Msa0006480 | Msa1083660 | -0.810107 | 1.358842e-50 | -8.615850e-47 |
| Msa0006480 | Msa1089990 | 0.812166 | 4.859748e-51 | -8.615850e-47 |
| Msa0006480 | Msa1092310 | 0.800594 | 1.339495e-48 | -8.615850e-47 |
| Msa0006480 | Msa1102410 | -0.817790 | 2.747386e-52 | -8.615850e-47 |
| Msa0006480 | Msa1106730 | -0.818377 | 2.022998e-52 | -8.615850e-47 |
| Msa0006480 | Msa1112210 | -0.805714 | 1.168416e-49 | -8.615850e-47 |
| Msa0006480 | Msa1115980 | 0.819904 | 9.090805e-53 | -8.615850e-47 |
| Msa0006480 | Msa1121720 | -0.826816 | 2.204280e-54 | -8.615850e-47 |
| Msa0006480 | Msa1123440 | -0.800182 | 1.624855e-48 | -8.615850e-47 |
| Msa0006480 | Msa1130150 | -0.816146 | 6.428169e-52 | -8.615850e-47 |
| Msa0006480 | Msa1132880 | -0.810695 | 1.014372e-50 | -8.615850e-47 |
| Msa0006480 | Msa1137750 | 0.800258 | 1.567899e-48 | -8.615850e-47 |
| Msa0006480 | Msa1146980 | 0.800690 | 1.280618e-48 | -8.615850e-47 |
| Msa0006480 | Msa1162430 | 0.818616 | 1.786660e-52 | -8.615850e-47 |
| Msa0006480 | Msa1177650 | 0.811134 | 8.148796e-51 | -8.615850e-47 |
| Msa0006480 | Msa1184680 | 0.830675 | 2.569125e-55 | -8.615850e-47 |
| Msa0006480 | Msa1191530 | -0.827265 | 1.721324e-54 | -8.615850e-47 |
| Msa0006480 | Msa1197720 | 0.829666 | 4.531668e-55 | -8.615850e-47 |
| Msa0006480 | Msa1199540 | -0.818580 | 1.819846e-52 | -8.615850e-47 |
| Msa0006480 | Msa1199700 | -0.800136 | 1.660705e-48 | -8.615850e-47 |
| Msa0006480 | Msa1202110 | 0.803132 | 4.033720e-49 | -8.615850e-47 |
| Msa0006480 | Msa1202470 | 0.817409 | 3.347600e-52 | -8.615850e-47 |
| Msa0006480 | Msa1202800 | 0.802656 | 5.058055e-49 | -8.615850e-47 |
| Msa0006480 | Msa1204900 | -0.802566 | 5.278736e-49 | -8.615850e-47 |
| Msa0006480 | Msa1205270 | -0.817753 | 2.800458e-52 | -8.615850e-47 |
| Msa0006480 | Msa1209990 | -0.816245 | 6.108018e-52 | -8.615850e-47 |
| Msa0006480 | Msa1212150 | -0.810983 | 8.786062e-51 | -8.615850e-47 |
| Msa0006480 | Msa1221270 | 0.806667 | 7.358723e-50 | -8.615850e-47 |
| Msa0006480 | Msa1223990 | 0.812833 | 3.473931e-51 | -8.615850e-47 |
| Msa0006480 | Msa1251410 | 0.802661 | 5.047157e-49 | -8.615850e-47 |
| Msa0006480 | Msa1254870 | 0.801732 | 7.835293e-49 | -8.615850e-47 |
| Msa0006480 | Msa1254910 | 0.801944 | 7.089173e-49 | -8.615850e-47 |
| Msa0006480 | Msa1263110 | 0.806243 | 9.040325e-50 | -8.615850e-47 |
| Msa0006480 | Msa1266120 | -0.813220 | 2.857923e-51 | -8.615850e-47 |
| Msa0006480 | Msa1269200 | 0.837429 | 5.224271e-57 | -8.615850e-47 |
| Msa0006480 | Msa1279200 | -0.809902 | 1.503789e-50 | -8.615850e-47 |
| Msa0006480 | Msa1286860 | -0.801722 | 7.872469e-49 | -8.615850e-47 |
| Msa0006480 | Msa1287100 | -0.801150 | 1.031303e-48 | -8.615850e-47 |
| Msa0006480 | Msa1295210 | -0.811973 | 5.355761e-51 | -8.615850e-47 |
| Msa0006480 | Msa1298480 | -0.816602 | 5.082304e-52 | -8.615850e-47 |
| Msa0006480 | Msa1317740 | 0.801891 | 7.267819e-49 | -8.615850e-47 |
| Msa0006480 | Msa1320660 | -0.800198 | 1.612442e-48 | -8.615850e-47 |
| Msa0006480 | Msa1328430 | 0.802075 | 6.662089e-49 | -8.615850e-47 |
| Msa0006480 | Msa1328680 | -0.809866 | 1.530774e-50 | -8.615850e-47 |
| Msa0006480 | Msa1331570 | -0.823895 | 1.082546e-53 | -8.615850e-47 |
| Msa0006480 | Msa1336020 | 0.809890 | 1.512950e-50 | -8.615850e-47 |
| Msa0006480 | Msa1341710 | -0.821484 | 3.939977e-53 | -8.615850e-47 |
| Msa0006480 | Msa1342360 | -0.822492 | 2.301118e-53 | -8.615850e-47 |
| Msa0006480 | Msa1343600 | 0.811733 | 6.038748e-51 | -8.615850e-47 |
| Msa0006480 | Msa1343980 | 0.821748 | 3.423942e-53 | -8.615850e-47 |
| Msa0006480 | Msa1356100 | -0.826252 | 3.004689e-54 | -8.615850e-47 |
| Msa0006480 | Msa1361580 | -0.807977 | 3.883288e-50 | -8.615850e-47 |
| Msa0006480 | Msa1361980 | 0.821323 | 4.292735e-53 | -8.615850e-47 |
| Msa0006480 | Msa1373420 | -0.808478 | 3.036557e-50 | -8.615850e-47 |
| Msa0006480 | Msa1375980 | -0.816614 | 5.049521e-52 | -8.615850e-47 |
| Msa0006480 | Msa1377980 | -0.818681 | 1.726535e-52 | -8.615850e-47 |
| Msa0006480 | Msa1381300 | -0.808003 | 3.833287e-50 | -8.615850e-47 |
| Msa0006480 | Msa1384700 | 0.817770 | 2.774918e-52 | -8.615850e-47 |
| Msa0006480 | Msa1386910 | -0.816767 | 4.667510e-52 | -8.615850e-47 |
| Msa0006480 | Msa1386980 | 0.815929 | 7.185536e-52 | -8.615850e-47 |
| Msa0006480 | Msa1392570 | -0.803778 | 2.963616e-49 | -8.615850e-47 |
| Msa0006480 | Msa1395380 | -0.813074 | 3.076859e-51 | -8.615850e-47 |
| Msa0006480 | Msa1403820 | -0.809092 | 2.245158e-50 | -8.615850e-47 |
| Msa0006480 | Msa1408230 | -0.821220 | 4.532900e-53 | -8.615850e-47 |
| Msa0006480 | Msa1408280 | -0.819381 | 1.196496e-52 | -8.615850e-47 |
| Msa0006480 | Msa1410500 | -0.812225 | 4.718621e-51 | -8.615850e-47 |
| Msa0006480 | Msa1415510 | -0.814903 | 1.215622e-51 | -8.615850e-47 |
| Msa0006480 | Msa1421630 | 0.806406 | 8.353194e-50 | -8.615850e-47 |
| Msa0006480 | Msa1435950 | -0.800578 | 1.349831e-48 | -8.615850e-47 |
| Msa0006480 | Msa1451200 | -0.801603 | 8.330223e-49 | -8.615850e-47 |
| Msa0006480 | Msa1454300 | -0.810341 | 1.209641e-50 | -8.615850e-47 |
| Msa0006480 | Msa1459130 | -0.834132 | 3.576541e-56 | -8.615850e-47 |
| Msa0006480 | Msa1459920 | 0.801278 | 9.707905e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0006480 | MtrunA17_Chr1g0149621 | 98.889 | 360 | 4 | 0 | 1 | 360 | 1 | 360 | 0.0 | 742 |
| Msa0006480 | MtrunA17_Chr5g0441831 | 61.219 | 361 | 125 | 4 | 1 | 360 | 7 | 353 | 1.68e-162 | 459 |
| Msa0006480 | MtrunA17_Chr8g0353191 | 62.842 | 366 | 123 | 5 | 1 | 360 | 1 | 359 | 8.39e-161 | 454 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0006480 | AT5G25265.1 | 81.421 | 366 | 62 | 3 | 1 | 360 | 1 | 366 | 0.0 | 602 |
| Msa0006480 | AT2G25260.1 | 72.702 | 359 | 91 | 5 | 4 | 360 | 5 | 358 | 0.0 | 530 |
| Msa0006480 | AT5G13500.2 | 71.924 | 317 | 85 | 3 | 46 | 360 | 43 | 357 | 2.68e-172 | 484 |
| Msa0006480 | AT5G13500.3 | 71.924 | 317 | 85 | 3 | 46 | 360 | 43 | 357 | 2.68e-172 | 484 |
| Msa0006480 | AT5G13500.1 | 71.924 | 317 | 85 | 3 | 46 | 360 | 43 | 357 | 2.68e-172 | 484 |
| Msa0006480 | AT3G01720.1 | 24.150 | 294 | 186 | 10 | 65 | 341 | 394 | 667 | 1.69e-12 | 69.3 |
Find 110 sgRNAs with CRISPR-Local
Find 345 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAAAGCTTTATCGGTTTC+AGG | 0.147915 | 1_1:-9392345 | None:intergenic |
| TTCATAATTCACTACACTTA+TGG | 0.167165 | 1_1:+9393830 | Msa0006480:CDS |
| CTAGGTGACTCTAGTGAAAA+TGG | 0.224137 | 1_1:+9395017 | Msa0006480:intron |
| GTTGCTCAACCTTTGCCTTC+TGG | 0.227974 | 1_1:+9390670 | Msa0006480:CDS |
| GCCGTTTCGTCTGCTCTTCA+TGG | 0.235074 | 1_1:+9392480 | Msa0006480:CDS |
| GACGAGTTTACGTTCAAATT+TGG | 0.238984 | 1_1:+9395311 | Msa0006480:three_prime_UTR |
| CCTGAAACCGATAAAGCTTT+TGG | 0.263522 | 1_1:+9392345 | Msa0006480:CDS |
| CACCCATCCAAAAGCTTTAT+CGG | 0.266241 | 1_1:-9392352 | None:intergenic |
| TATCTAGTTGGTGTTGAAAA+AGG | 0.267682 | 1_1:-9390169 | None:intergenic |
| ATGAAACATACCACACTTTC+CGG | 0.272009 | 1_1:-9394076 | None:intergenic |
| GAAGAAGTTGGTGAATTATT+AGG | 0.281680 | 1_1:-9390221 | None:intergenic |
| AATATTTCAATATGGTGTTT+TGG | 0.293227 | 1_1:-9395254 | None:intergenic |
| ATTGGATCTATATTGGTTAC+AGG | 0.301550 | 1_1:-9391997 | None:intergenic |
| CAAATGCCCATGGTCTATTA+AGG | 0.302361 | 1_1:-9391703 | None:intergenic |
| TTAAGTGGCATCTTGATTAC+TGG | 0.305393 | 1_1:-9390442 | None:intergenic |
| ACACAAGGACTTCATGATTC+AGG | 0.308069 | 1_1:+9392518 | Msa0006480:CDS |
| TGTTGGAGCAATCTTCTTAA+GGG | 0.314451 | 1_1:-9392289 | None:intergenic |
| ATTTCCAATTGGATCTATAT+TGG | 0.315891 | 1_1:-9392004 | None:intergenic |
| AGTGTAGAGTTATGTATTAT+TGG | 0.315997 | 1_1:+9390539 | Msa0006480:CDS |
| ATGTTACTGAGAATGTTATT+AGG | 0.323674 | 1_1:-9390330 | None:intergenic |
| AGCACTTTCTCATATTTCTT+AGG | 0.325931 | 1_1:-9391946 | None:intergenic |
| TGGTAAAACTGATCAGTATA+TGG | 0.343547 | 1_1:+9390630 | Msa0006480:CDS |
| TATTCCGAACTGGTCATCAT+AGG | 0.344222 | 1_1:+9395059 | Msa0006480:CDS |
| TCATAATTCACTACACTTAT+GGG | 0.346462 | 1_1:+9393831 | Msa0006480:CDS |
| TAAAATAAAATATTTCAATA+TGG | 0.350913 | 1_1:-9395262 | None:intergenic |
| ATAATAGATCGGTACCTTCA+TGG | 0.360692 | 1_1:-9393864 | None:intergenic |
| ATGTTGGAGCAATCTTCTTA+AGG | 0.368822 | 1_1:-9392290 | None:intergenic |
| GATACCTTGCCAACAATTAC+AGG | 0.376521 | 1_1:-9392030 | None:intergenic |
| CATTCCATCTCTGGCTAAGT+TGG | 0.377427 | 1_1:-9391893 | None:intergenic |
| TTTATTGATAGTTGTAGTTA+GGG | 0.386474 | 1_1:+9395287 | Msa0006480:three_prime_UTR |
| CTGGTATGGGTGGATTTACT+AGG | 0.390112 | 1_1:+9390596 | Msa0006480:CDS |
| GAAAGTGGTGATGACAATTC+TGG | 0.391728 | 1_1:+9390577 | Msa0006480:CDS |
| GGAAATTCACCTGTAATTGT+TGG | 0.394236 | 1_1:+9392021 | Msa0006480:CDS |
| GTTACAGGTCCGTTCTCCTC+AGG | 0.398056 | 1_1:-9391982 | None:intergenic |
| CTGATTCTGTTTACAATACA+TGG | 0.406387 | 1_1:+9390515 | Msa0006480:CDS |
| TTTGCCTTCTGGAATGGATC+AGG | 0.414709 | 1_1:+9390681 | Msa0006480:CDS |
| ATTACAGGTGAATTTCCAAT+TGG | 0.422481 | 1_1:-9392015 | None:intergenic |
| TGGTTCTGTCTATATCTAGT+TGG | 0.426997 | 1_1:-9390181 | None:intergenic |
| TGCAGCTCCCATTCCATCTC+TGG | 0.432516 | 1_1:-9391902 | None:intergenic |
| TCAACCTTTGCCTTCTGGAA+TGG | 0.434673 | 1_1:+9390675 | Msa0006480:CDS |
| TCTCTGGCTAAGTTGGGTAT+AGG | 0.438539 | 1_1:-9391886 | None:intergenic |
| ATTGCCACCACCTGGTGTTC+CGG | 0.439856 | 1_1:+9394057 | Msa0006480:CDS |
| TCGTCTGCTCTTCATGGTGT+TGG | 0.457117 | 1_1:+9392486 | Msa0006480:CDS |
| ATTCCATCTCTGGCTAAGTT+GGG | 0.459075 | 1_1:-9391892 | None:intergenic |
| AACATGGATGAATGTTTCCT+TGG | 0.468333 | 1_1:+9392308 | Msa0006480:CDS |
| GTAACCAATATAGATCCAAT+TGG | 0.470446 | 1_1:+9392000 | Msa0006480:CDS |
| TTAGGCTCGATATAAAAGAA+AGG | 0.471498 | 1_1:-9391928 | None:intergenic |
| CCACCATGGGACAAAGAACT+TGG | 0.473823 | 1_1:+9393800 | Msa0006480:CDS |
| AATCAGGGTGAACTGACATA+TGG | 0.476030 | 1_1:+9393971 | Msa0006480:intron |
| AAAGGTTGAGCAACAAAAGT+AGG | 0.477238 | 1_1:-9390661 | None:intergenic |
| TGTTTCCTTGGCAATGAAGA+AGG | 0.478316 | 1_1:+9392320 | Msa0006480:CDS |
| TTGCCAAGTTCTTTGTCCCA+TGG | 0.483106 | 1_1:-9393803 | None:intergenic |
| GGTTTCACAATGATATGATC+TGG | 0.489542 | 1_1:-9391865 | None:intergenic |
| CAACTTAGCCAGAGATGGAA+TGG | 0.497539 | 1_1:+9391894 | Msa0006480:CDS |
| TACGTTCAAATTTGGTACCT+CGG | 0.504706 | 1_1:+9395319 | Msa0006480:three_prime_UTR |
| TTCACCTGTAATTGTTGGCA+AGG | 0.504988 | 1_1:+9392026 | Msa0006480:CDS |
| ACATACAACATCATTATCTC+AGG | 0.505441 | 1_1:+9390358 | Msa0006480:CDS |
| CCGCAGCAAATATTCCGAAC+TGG | 0.517078 | 1_1:+9395049 | Msa0006480:CDS |
| TGGTGATGACAATTCTGGTA+TGG | 0.520121 | 1_1:+9390582 | Msa0006480:CDS |
| AACTTAGCCAGAGATGGAAT+GGG | 0.520799 | 1_1:+9391895 | Msa0006480:CDS |
| GTCATCATAGGGCTTTCTAC+AGG | 0.521846 | 1_1:+9395071 | Msa0006480:exon |
| TAGGCTCGATATAAAAGAAA+GGG | 0.524947 | 1_1:-9391927 | None:intergenic |
| TTATTAGGCGGCTATATGAA+AGG | 0.527083 | 1_1:-9390206 | None:intergenic |
| TATTAGGCGGCTATATGAAA+GGG | 0.529546 | 1_1:-9390205 | None:intergenic |
| TTTATTGATGGTTTACGTGA+AGG | 0.530199 | 1_1:-9390412 | None:intergenic |
| GCGTGCCATTTGTCACAGAT+TGG | 0.533569 | 1_1:+9395124 | Msa0006480:three_prime_UTR |
| CCAGGAAAATCTTGTCTCAA+AGG | 0.533851 | 1_1:-9390388 | None:intergenic |
| ACCATGAAGAGCAGACGAAA+CGG | 0.535360 | 1_1:-9392481 | None:intergenic |
| TAAGTGGCATCTTGATTACT+GGG | 0.536185 | 1_1:-9390441 | None:intergenic |
| AAGCCCTATGATGACCAGTT+CGG | 0.537283 | 1_1:-9395063 | None:intergenic |
| AGGATCCTTCTTCATTGCCA+AGG | 0.541651 | 1_1:-9392325 | None:intergenic |
| ACCACACTTTCCGGAACACC+AGG | 0.542603 | 1_1:-9394067 | None:intergenic |
| TTACAGGTCCGTTCTCCTCA+GGG | 0.544928 | 1_1:-9391981 | None:intergenic |
| TTTAAGAAGATGAAGGAAAG+TGG | 0.546825 | 1_1:+9390562 | Msa0006480:CDS |
| ATTATGTATGTCAGCCACCA+TGG | 0.547374 | 1_1:+9393786 | Msa0006480:intron |
| ATTCCGAACTGGTCATCATA+GGG | 0.555677 | 1_1:+9395060 | Msa0006480:CDS |
| CCAAGTTCTTTGTCCCATGG+TGG | 0.557973 | 1_1:-9393800 | None:intergenic |
| AATCTGACATTGCCACCACC+TGG | 0.559929 | 1_1:+9394049 | Msa0006480:CDS |
| AAGGAAACATTCATCCATGT+TGG | 0.564015 | 1_1:-9392306 | None:intergenic |
| TTACAGTGTGATCAGAATGC+AGG | 0.564930 | 1_1:+9395097 | Msa0006480:three_prime_UTR |
| ACATTGTCCTTAATAGACCA+TGG | 0.570525 | 1_1:+9391696 | Msa0006480:CDS |
| CATTGTCCTTAATAGACCAT+GGG | 0.571906 | 1_1:+9391697 | Msa0006480:CDS |
| AAGGTTGAGCAACAAAAGTA+GGG | 0.572523 | 1_1:-9390660 | None:intergenic |
| TTATTGGTTTAAGAAGATGA+AGG | 0.575689 | 1_1:+9390555 | Msa0006480:CDS |
| ATACCCAACTTAGCCAGAGA+TGG | 0.578267 | 1_1:+9391889 | Msa0006480:CDS |
| TGATGCCAATCTGTGACAAA+TGG | 0.578611 | 1_1:-9395129 | None:intergenic |
| ATCATAGGGCTTTCTACAGG+TGG | 0.580592 | 1_1:+9395074 | Msa0006480:exon |
| TTATGTATGTCAGCCACCAT+GGG | 0.581129 | 1_1:+9393787 | Msa0006480:intron |
| GATGGTTTACGTGAAGGACC+AGG | 0.582960 | 1_1:-9390406 | None:intergenic |
| TACAGTGTGATCAGAATGCA+GGG | 0.583449 | 1_1:+9395098 | Msa0006480:three_prime_UTR |
| ACCTGGTGTTCCGGAAAGTG+TGG | 0.593682 | 1_1:+9394066 | Msa0006480:CDS |
| AGGCGGCTATATGAAAGGGT+TGG | 0.596018 | 1_1:-9390201 | None:intergenic |
| AAGTACTACCCTGAGGAGAA+CGG | 0.599409 | 1_1:+9391973 | Msa0006480:CDS |
| TTAAGAAGATTGCTCCAACA+TGG | 0.603507 | 1_1:+9392292 | Msa0006480:CDS |
| GGTGATGACAATTCTGGTAT+GGG | 0.617478 | 1_1:+9390583 | Msa0006480:CDS |
| GACCATGGGCATTTGTACAG+TGG | 0.619885 | 1_1:+9391711 | Msa0006480:CDS |
| CTTTCCGGAACACCAGGTGG+TGG | 0.623026 | 1_1:-9394061 | None:intergenic |
| AGAACCTGATCCATTCCAGA+AGG | 0.629291 | 1_1:-9390685 | None:intergenic |
| TGATCCATTCCAGAAGGCAA+AGG | 0.638296 | 1_1:-9390679 | None:intergenic |
| AGCCACTGTACAAATGCCCA+TGG | 0.640117 | 1_1:-9391713 | None:intergenic |
| GATGACAATTCTGGTATGGG+TGG | 0.644898 | 1_1:+9390586 | Msa0006480:CDS |
| GAAGTTGGTGAATTATTAGG+CGG | 0.651672 | 1_1:-9390218 | None:intergenic |
| TGTAGATGACTTTACACCTG+AGG | 0.656696 | 1_1:+9395179 | Msa0006480:three_prime_UTR |
| TGGGTGTGACTATTCCATGA+AGG | 0.657511 | 1_1:+9393850 | Msa0006480:CDS |
| CCAGTTCGGAATATTTGCTG+CGG | 0.659311 | 1_1:-9395049 | None:intergenic |
| TGTTGGTAACATATTACACA+AGG | 0.688104 | 1_1:+9392503 | Msa0006480:CDS |
| TTGTATGAAATAAGTTACCG+AGG | 0.692022 | 1_1:-9395336 | None:intergenic |
| ACATAAGAATTACAGATACA+CGG | 0.703455 | 1_1:-9395159 | None:intergenic |
| ACACTTTCCGGAACACCAGG+TGG | 0.723361 | 1_1:-9394064 | None:intergenic |
| GCTGAGAAAGTACTACCCTG+AGG | 0.760751 | 1_1:+9391966 | Msa0006480:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAGAATTTAATAATAGAT+CGG | - | chr1_1:9393878-9393897 | None:intergenic | 10.0% |
| !! | AACAAAACAAATTTCAAAAA+TGG | + | chr1_1:9390282-9390301 | Msa0006480:exon | 15.0% |
| !! | ACAAAACAAATTTCAAAAAT+GGG | + | chr1_1:9390283-9390302 | Msa0006480:exon | 15.0% |
| !!! | TTTTGAAAGTTCATTAATTT+TGG | + | chr1_1:9391574-9391593 | Msa0006480:intron | 15.0% |
| !!! | TTTGAAAGTTCATTAATTTT+GGG | + | chr1_1:9391575-9391594 | Msa0006480:intron | 15.0% |
| !!! | TTAAATTCATTTTCTATTCT+AGG | + | chr1_1:9391777-9391796 | Msa0006480:intron | 15.0% |
| !! | ATTCTGATAATTATGATTTA+TGG | + | chr1_1:9392066-9392085 | Msa0006480:intron | 15.0% |
| !! | TTATAATTTAAGTCAAATGA+CGG | + | chr1_1:9392186-9392205 | Msa0006480:intron | 15.0% |
| !!! | TTTAATTTTGCAAAAATGAT+AGG | + | chr1_1:9392263-9392282 | Msa0006480:intron | 15.0% |
| !! | TGAAAGTTAAAAAAATGTAT+TGG | + | chr1_1:9394371-9394390 | Msa0006480:intron | 15.0% |
| !! | GAAAGTTAAAAAAATGTATT+GGG | + | chr1_1:9394372-9394391 | Msa0006480:intron | 15.0% |
| !! | AAAGTTAAAAAAATGTATTG+GGG | + | chr1_1:9394373-9394392 | Msa0006480:intron | 15.0% |
| !!! | ATGATTTGTTTATAAACAAT+CGG | - | chr1_1:9394869-9394888 | None:intergenic | 15.0% |
| !!! | TTATGTCTAATTTTACAATT+TGG | + | chr1_1:9394984-9395003 | Msa0006480:intron | 15.0% |
| !!! | GTTGATTTGTATAAATGATT+CGG | + | chr1_1:9390759-9390778 | Msa0006480:intron | 20.0% |
| !! | TTTAAATTGAGAAATGTTAG+TGG | + | chr1_1:9391023-9391042 | Msa0006480:intron | 20.0% |
| !! | CCAAAAAAAATTACAAACTA+CGG | - | chr1_1:9391238-9391257 | None:intergenic | 20.0% |
| !!! | ATCAGTTTATTCTTTGAAAT+TGG | + | chr1_1:9391508-9391527 | Msa0006480:intron | 20.0% |
| !! | TATTAATGTATGTTCCTTTA+TGG | + | chr1_1:9391666-9391685 | Msa0006480:intron | 20.0% |
| !! | GCAATGAAGAATTATATTTA+AGG | + | chr1_1:9392677-9392696 | Msa0006480:intron | 20.0% |
| !! | AAACAAATCTAACACTTTAA+AGG | + | chr1_1:9393009-9393028 | Msa0006480:intron | 20.0% |
| !! | TCATAGAAAAGTTAAAAGAA+AGG | + | chr1_1:9393258-9393277 | Msa0006480:intron | 20.0% |
| !!! | AATATCCAGATAATTTGTAT+GGG | - | chr1_1:9393327-9393346 | None:intergenic | 20.0% |
| !!! | TAATATCCAGATAATTTGTA+TGG | - | chr1_1:9393328-9393347 | None:intergenic | 20.0% |
| !! | ACGATATGATTTGATAAAAT+TGG | - | chr1_1:9393388-9393407 | None:intergenic | 20.0% |
| !!! | ATTATTTGTTTTTCCTGAAT+AGG | + | chr1_1:9394827-9394846 | Msa0006480:intron | 20.0% |
| !!! | AATATTTCAATATGGTGTTT+TGG | - | chr1_1:9395257-9395276 | None:intergenic | 20.0% |
| !!! | TTTTATTGATAGTTGTAGTT+AGG | + | chr1_1:9395286-9395305 | Msa0006480:three_prime_UTR | 20.0% |
| !!! | TTTATTGATAGTTGTAGTTA+GGG | + | chr1_1:9395287-9395306 | Msa0006480:three_prime_UTR | 20.0% |
| ! | ATGTTACTGAGAATGTTATT+AGG | - | chr1_1:9390333-9390352 | None:intergenic | 25.0% |
| ! | AGTGTAGAGTTATGTATTAT+TGG | + | chr1_1:9390539-9390558 | Msa0006480:CDS | 25.0% |
| !!! | TTATTGGTTTAAGAAGATGA+AGG | + | chr1_1:9390555-9390574 | Msa0006480:CDS | 25.0% |
| !! | TGTAGTACTATACTTGATTT+TGG | + | chr1_1:9390945-9390964 | Msa0006480:intron | 25.0% |
| !!! | AAAGATGGTATTTTTGTGAT+TGG | + | chr1_1:9390970-9390989 | Msa0006480:intron | 25.0% |
| !!! | AAGATGGTATTTTTGTGATT+GGG | + | chr1_1:9390971-9390990 | Msa0006480:intron | 25.0% |
| ! | TAGTTGAGTTTGAATGATTT+AGG | + | chr1_1:9391065-9391084 | Msa0006480:intron | 25.0% |
| ! | TTGAAATCACTACTGTTATT+TGG | + | chr1_1:9391152-9391171 | Msa0006480:intron | 25.0% |
| !!! | CCGTAGTTTGTAATTTTTTT+TGG | + | chr1_1:9391235-9391254 | Msa0006480:intron | 25.0% |
| ! | ACAGTCTGATTTCAATAAAA+CGG | + | chr1_1:9391349-9391368 | Msa0006480:intron | 25.0% |
| !! | TTGATTACATTAGTCCTTTT+GGG | + | chr1_1:9391482-9391501 | Msa0006480:intron | 25.0% |
| !!! | CATTTTCTATTCTAGGATTT+TGG | + | chr1_1:9391784-9391803 | Msa0006480:intron | 25.0% |
| ! | ATTTCCAATTGGATCTATAT+TGG | - | chr1_1:9392007-9392026 | None:intergenic | 25.0% |
| !! | ACAGTGTAGAACTTTTTATA+CGG | - | chr1_1:9392123-9392142 | None:intergenic | 25.0% |
| ! | GTGTGTGAATTAAATACTTA+TGG | + | chr1_1:9392210-9392229 | Msa0006480:intron | 25.0% |
| !! | ATAAAAATCAAGTTGTTGTG+AGG | - | chr1_1:9392427-9392446 | None:intergenic | 25.0% |
| !!! | TTATTTTGTATCGTTGATAC+AGG | + | chr1_1:9392448-9392467 | Msa0006480:intron | 25.0% |
| ! | ACTTATCAATAAAAAGCGAT+AGG | - | chr1_1:9392645-9392664 | None:intergenic | 25.0% |
| !! | ATTTGAAATCCTTGACTAAA+TGG | - | chr1_1:9392773-9392792 | None:intergenic | 25.0% |
| ! | ACTTGATATACTAACACTTA+AGG | - | chr1_1:9392808-9392827 | None:intergenic | 25.0% |
| ! | ATTATGAACTCTTCTAAACA+AGG | - | chr1_1:9392869-9392888 | None:intergenic | 25.0% |
| ! | AAAAAATGAGTCATGCTATA+TGG | + | chr1_1:9392924-9392943 | Msa0006480:intron | 25.0% |
| ! | TATTTCCCATACAAATTATC+TGG | + | chr1_1:9393319-9393338 | Msa0006480:intron | 25.0% |
| ! | GATTTGATAAAATTGGAAAC+TGG | - | chr1_1:9393381-9393400 | None:intergenic | 25.0% |
| ! | TCAAATCATATCGTGTAAAT+AGG | + | chr1_1:9393394-9393413 | Msa0006480:intron | 25.0% |
| ! | CAAATCATATCGTGTAAATA+GGG | + | chr1_1:9393395-9393414 | Msa0006480:intron | 25.0% |
| ! | AGCAAATGAGAATTAAACAT+GGG | - | chr1_1:9393666-9393685 | None:intergenic | 25.0% |
| ! | AAGCAAATGAGAATTAAACA+TGG | - | chr1_1:9393667-9393686 | None:intergenic | 25.0% |
| !! | TTTTAGTACAATGTTGGAAA+TGG | - | chr1_1:9393691-9393710 | None:intergenic | 25.0% |
| ! | CAACATTGTACTAAAAAACA+CGG | + | chr1_1:9393695-9393714 | Msa0006480:intron | 25.0% |
| ! | TTCATAATTCACTACACTTA+TGG | + | chr1_1:9393830-9393849 | Msa0006480:CDS | 25.0% |
| ! | TCATAATTCACTACACTTAT+GGG | + | chr1_1:9393831-9393850 | Msa0006480:CDS | 25.0% |
| ! | TTAAAAAAATGTATTGGGGA+GGG | + | chr1_1:9394377-9394396 | Msa0006480:intron | 25.0% |
| ! | TCGAAAAAGCAAAAACAAAA+AGG | + | chr1_1:9394555-9394574 | Msa0006480:intron | 25.0% |
| !!! | AGAACAGTTTTTCTTTAAGA+GGG | - | chr1_1:9394719-9394738 | None:intergenic | 25.0% |
| ! | TTAGATGACCTTAAAATCAA+GGG | - | chr1_1:9394792-9394811 | None:intergenic | 25.0% |
| ! | ATTAGATGACCTTAAAATCA+AGG | - | chr1_1:9394793-9394812 | None:intergenic | 25.0% |
| !!! | TCTTCTTGTTTTGAATGTTT+GGG | + | chr1_1:9394944-9394963 | Msa0006480:intron | 25.0% |
| ! | ACATAAGAATTACAGATACA+CGG | - | chr1_1:9395162-9395181 | None:intergenic | 25.0% |
| !!! | ACATGAATTTTTTCAATGCT+TGG | + | chr1_1:9395205-9395224 | Msa0006480:three_prime_UTR | 25.0% |
| !! | TATCTAGTTGGTGTTGAAAA+AGG | - | chr1_1:9390172-9390191 | None:intergenic | 30.0% |
| !! | GAAGAAGTTGGTGAATTATT+AGG | - | chr1_1:9390224-9390243 | None:intergenic | 30.0% |
| !! | CAAATTTCAAAAATGGGTTG+TGG | + | chr1_1:9390289-9390308 | Msa0006480:exon | 30.0% |
| ACATACAACATCATTATCTC+AGG | + | chr1_1:9390358-9390377 | Msa0006480:CDS | 30.0% | |
| ! | TTTATTGATGGTTTACGTGA+AGG | - | chr1_1:9390415-9390434 | None:intergenic | 30.0% |
| !!! | GAAGCACTTTTTCTATTAAG+TGG | - | chr1_1:9390460-9390479 | None:intergenic | 30.0% |
| CTGATTCTGTTTACAATACA+TGG | + | chr1_1:9390515-9390534 | Msa0006480:CDS | 30.0% | |
| TTTAAGAAGATGAAGGAAAG+TGG | + | chr1_1:9390562-9390581 | Msa0006480:CDS | 30.0% | |
| ! | TTTACTAGGATTTTGCATTC+TGG | + | chr1_1:9390610-9390629 | Msa0006480:CDS | 30.0% |
| TGGTAAAACTGATCAGTATA+TGG | + | chr1_1:9390630-9390649 | Msa0006480:CDS | 30.0% | |
| TACTTGATCTTGGTGAAAAA+TGG | + | chr1_1:9390788-9390807 | Msa0006480:intron | 30.0% | |
| TCAAACTCAACTATCAACTA+TGG | - | chr1_1:9390867-9390886 | None:intergenic | 30.0% | |
| TAGTTGAGTTTGAGTGATTT+AGG | + | chr1_1:9390874-9390893 | Msa0006480:intron | 30.0% | |
| !! | TACTTGATTTTGGAGAAAGA+TGG | + | chr1_1:9390955-9390974 | Msa0006480:intron | 30.0% |
| TCAAACTCAACTATCAACTT+TGG | - | chr1_1:9391058-9391077 | None:intergenic | 30.0% | |
| ! | TCACTACTGTTATTTGGAAA+TGG | + | chr1_1:9391158-9391177 | Msa0006480:intron | 30.0% |
| GCAATCACTATTTGACTATA+AGG | - | chr1_1:9391187-9391206 | None:intergenic | 30.0% | |
| TATAGTCAAATAGTGATTGC+AGG | + | chr1_1:9391187-9391206 | Msa0006480:intron | 30.0% | |
| !! | GTTTTATTGAAATCAGACTG+TGG | - | chr1_1:9391350-9391369 | None:intergenic | 30.0% |
| TAATTTAGTCCCTAAAACAG+TGG | + | chr1_1:9391396-9391415 | Msa0006480:intron | 30.0% | |
| ! | CTTGATTACATTAGTCCTTT+TGG | + | chr1_1:9391481-9391500 | Msa0006480:intron | 30.0% |
| !! | TTTATTCTTTGAAATTGGCG+CGG | + | chr1_1:9391513-9391532 | Msa0006480:intron | 30.0% |
| !! | AATTTTGTCCTCAAGTTGTA+GGG | - | chr1_1:9391616-9391635 | None:intergenic | 30.0% |
| TAGGCTCGATATAAAAGAAA+GGG | - | chr1_1:9391930-9391949 | None:intergenic | 30.0% | |
| TTAGGCTCGATATAAAAGAA+AGG | - | chr1_1:9391931-9391950 | None:intergenic | 30.0% | |
| AGCACTTTCTCATATTTCTT+AGG | - | chr1_1:9391949-9391968 | None:intergenic | 30.0% | |
| ! | ATTGGATCTATATTGGTTAC+AGG | - | chr1_1:9392000-9392019 | None:intergenic | 30.0% |
| GTAACCAATATAGATCCAAT+TGG | + | chr1_1:9392000-9392019 | Msa0006480:CDS | 30.0% | |
| ATTACAGGTGAATTTCCAAT+TGG | - | chr1_1:9392018-9392037 | None:intergenic | 30.0% | |
| !! | TACTTCTAAAATCACACGTA+TGG | - | chr1_1:9392165-9392184 | None:intergenic | 30.0% |
| !! | TGTTGGTAACATATTACACA+AGG | + | chr1_1:9392503-9392522 | Msa0006480:CDS | 30.0% |
| !! | TTCATGATTCAGGTTGAATA+AGG | + | chr1_1:9392528-9392547 | Msa0006480:intron | 30.0% |
| AAGTGTTAGTATATCAAGTG+TGG | + | chr1_1:9392809-9392828 | Msa0006480:intron | 30.0% | |
| ACTTTAACCACAACAAGTAT+TGG | + | chr1_1:9393053-9393072 | Msa0006480:intron | 30.0% | |
| ! | TCTTCAAACAAGAAGCTTTT+TGG | + | chr1_1:9393551-9393570 | Msa0006480:intron | 30.0% |
| !!! | CGTGTTTTTTAGTACAATGT+TGG | - | chr1_1:9393697-9393716 | None:intergenic | 30.0% |
| TTAAGTCGTTGCTTAATGTA+TGG | + | chr1_1:9393940-9393959 | Msa0006480:intron | 30.0% | |
| ATGTATGGTGTGAAATAATC+AGG | + | chr1_1:9393955-9393974 | Msa0006480:intron | 30.0% | |
| TGTATGGTGTGAAATAATCA+GGG | + | chr1_1:9393956-9393975 | Msa0006480:intron | 30.0% | |
| GAACTGACATATGGAAAAAT+TGG | + | chr1_1:9393980-9393999 | Msa0006480:CDS | 30.0% | |
| CATATGGAAAAATTGGAGAA+TGG | + | chr1_1:9393987-9394006 | Msa0006480:CDS | 30.0% | |
| ! | CAACACACAAAAAAAAGTGT+AGG | - | chr1_1:9394138-9394157 | None:intergenic | 30.0% |
| !!! | CTACACTTTTTTTTGTGTGT+TGG | + | chr1_1:9394136-9394155 | Msa0006480:intron | 30.0% |
| !!! | TGTGTGTTGGTTTTGTTTTT+TGG | + | chr1_1:9394149-9394168 | Msa0006480:intron | 30.0% |
| !!! | GTGTGTTGGTTTTGTTTTTT+GGG | + | chr1_1:9394150-9394169 | Msa0006480:intron | 30.0% |
| GATTTAACTCGATCAGTTTA+AGG | + | chr1_1:9394210-9394229 | Msa0006480:intron | 30.0% | |
| TTTGAGAGTTTAGATCAGAA+AGG | + | chr1_1:9394238-9394257 | Msa0006480:intron | 30.0% | |
| GTTAAAAAAATGTATTGGGG+AGG | + | chr1_1:9394376-9394395 | Msa0006480:intron | 30.0% | |
| !! | TTTTTCGAAAACTCAGTATC+CGG | - | chr1_1:9394543-9394562 | None:intergenic | 30.0% |
| AAAGCAAAAACAAAAAGGTG+AGG | + | chr1_1:9394560-9394579 | Msa0006480:intron | 30.0% | |
| AAGCAAAAACAAAAAGGTGA+GGG | + | chr1_1:9394561-9394580 | Msa0006480:intron | 30.0% | |
| TGACTTTACTCAAATTGGTT+GGG | - | chr1_1:9394653-9394672 | None:intergenic | 30.0% | |
| ATGACTTTACTCAAATTGGT+TGG | - | chr1_1:9394654-9394673 | None:intergenic | 30.0% | |
| AACCAATTTGAGTAAAGTCA+TGG | + | chr1_1:9394653-9394672 | Msa0006480:intron | 30.0% | |
| ATCCATGACTTTACTCAAAT+TGG | - | chr1_1:9394658-9394677 | None:intergenic | 30.0% | |
| ATTTGAGTAAAGTCATGGAT+TGG | + | chr1_1:9394658-9394677 | Msa0006480:intron | 30.0% | |
| TTTGAGTAAAGTCATGGATT+GGG | + | chr1_1:9394659-9394678 | Msa0006480:intron | 30.0% | |
| ! | AAGAGGGTATAAGATAACAA+TGG | - | chr1_1:9394703-9394722 | None:intergenic | 30.0% |
| ! | CAGAACAGTTTTTCTTTAAG+AGG | - | chr1_1:9394720-9394739 | None:intergenic | 30.0% |
| CTCTTAAAGAAAAACTGTTC+TGG | + | chr1_1:9394718-9394737 | Msa0006480:intron | 30.0% | |
| AGAAAGACATTCATACTGTT+TGG | + | chr1_1:9394750-9394769 | Msa0006480:intron | 30.0% | |
| GAAAGACATTCATACTGTTT+GGG | + | chr1_1:9394751-9394770 | Msa0006480:intron | 30.0% | |
| ! | TTTTCCTGAATAGGAACAAT+TGG | + | chr1_1:9394836-9394855 | Msa0006480:intron | 30.0% |
| !!! | CTCTTCTTGTTTTGAATGTT+TGG | + | chr1_1:9394943-9394962 | Msa0006480:intron | 30.0% |
| ! | TTTTGAATGTTTGGGAGATT+TGG | + | chr1_1:9394952-9394971 | Msa0006480:intron | 30.0% |
| TTTGAATGTTTGGGAGATTT+GGG | + | chr1_1:9394953-9394972 | Msa0006480:intron | 30.0% | |
| !!! | CAATTTGGTTTTCCTTTTCT+AGG | + | chr1_1:9394999-9395018 | Msa0006480:intron | 30.0% |
| AAAAAATTCATGTTTGCCTC+AGG | - | chr1_1:9395198-9395217 | None:intergenic | 30.0% | |
| TTGTATGAAATAAGTTACCG+AGG | - | chr1_1:9395339-9395358 | None:intergenic | 30.0% | |
| ! | GGGCAAAAATTCATGTTTTT+GGG | - | chr1_1:9395399-9395418 | None:intergenic | 30.0% |
| ! | TGGGCAAAAATTCATGTTTT+TGG | - | chr1_1:9395400-9395419 | None:intergenic | 30.0% |
| ! | AATTTTTGCCCACATAAAAG+AGG | + | chr1_1:9395408-9395427 | Msa0006480:three_prime_UTR | 30.0% |
| ! | ACATATTGCCTCTTTTATGT+GGG | - | chr1_1:9395419-9395438 | None:intergenic | 30.0% |
| ! | AACATATTGCCTCTTTTATG+TGG | - | chr1_1:9395420-9395439 | None:intergenic | 30.0% |
| ! | TGGTTCTGTCTATATCTAGT+TGG | - | chr1_1:9390184-9390203 | None:intergenic | 35.0% |
| TATTAGGCGGCTATATGAAA+GGG | - | chr1_1:9390208-9390227 | None:intergenic | 35.0% | |
| TTATTAGGCGGCTATATGAA+AGG | - | chr1_1:9390209-9390228 | None:intergenic | 35.0% | |
| !! | GAAGTTGGTGAATTATTAGG+CGG | - | chr1_1:9390221-9390240 | None:intergenic | 35.0% |
| TGTGAAGAAGAAGAAGAAGT+TGG | - | chr1_1:9390236-9390255 | None:intergenic | 35.0% | |
| !! | ACTGGGTCGATTTTTATTGA+TGG | - | chr1_1:9390427-9390446 | None:intergenic | 35.0% |
| TAAGTGGCATCTTGATTACT+GGG | - | chr1_1:9390444-9390463 | None:intergenic | 35.0% | |
| TTAAGTGGCATCTTGATTAC+TGG | - | chr1_1:9390445-9390464 | None:intergenic | 35.0% | |
| AAGGTTGAGCAACAAAAGTA+GGG | - | chr1_1:9390663-9390682 | None:intergenic | 35.0% | |
| AAAGGTTGAGCAACAAAAGT+AGG | - | chr1_1:9390664-9390683 | None:intergenic | 35.0% | |
| CTCACTCACAATATAGTCAA+TGG | - | chr1_1:9391113-9391132 | None:intergenic | 35.0% | |
| ! | CATTGACTATATTGTGAGTG+AGG | + | chr1_1:9391111-9391130 | Msa0006480:intron | 35.0% |
| GTAAACGGTTAAGATAAGCT+TGG | - | chr1_1:9391268-9391287 | None:intergenic | 35.0% | |
| CTTAATGGGATAATAAGGCT+TGG | - | chr1_1:9391299-9391318 | None:intergenic | 35.0% | |
| !! | AGCCTTATTATCCCATTAAG+TGG | + | chr1_1:9391299-9391318 | Msa0006480:intron | 35.0% |
| ! | GCCTTATTATCCCATTAAGT+GGG | + | chr1_1:9391300-9391319 | Msa0006480:intron | 35.0% |
| CCTTATTATCCCATTAAGTG+GGG | + | chr1_1:9391301-9391320 | Msa0006480:intron | 35.0% | |
| ATAAAACGGCCTAACATTCT+TGG | + | chr1_1:9391363-9391382 | Msa0006480:intron | 35.0% | |
| TGATTCACTCCAAGAATGTT+AGG | - | chr1_1:9391375-9391394 | None:intergenic | 35.0% | |
| AATAAACTGATCGACCCAAA+AGG | - | chr1_1:9391499-9391518 | None:intergenic | 35.0% | |
| !! | CAATTTTGTCCTCAAGTTGT+AGG | - | chr1_1:9391617-9391636 | None:intergenic | 35.0% |
| AATGTATGTTCCTTTATGGC+AGG | + | chr1_1:9391670-9391689 | Msa0006480:intron | 35.0% | |
| ATGTATGTTCCTTTATGGCA+GGG | + | chr1_1:9391671-9391690 | Msa0006480:intron | 35.0% | |
| ACATTGTCCTTAATAGACCA+TGG | + | chr1_1:9391696-9391715 | Msa0006480:CDS | 35.0% | |
| CATTGTCCTTAATAGACCAT+GGG | + | chr1_1:9391697-9391716 | Msa0006480:CDS | 35.0% | |
| GGTTTCACAATGATATGATC+TGG | - | chr1_1:9391868-9391887 | None:intergenic | 35.0% | |
| GGAAATTCACCTGTAATTGT+TGG | + | chr1_1:9392021-9392040 | Msa0006480:CDS | 35.0% | |
| ! | TCTAAAATCACACGTATGGT+TGG | - | chr1_1:9392161-9392180 | None:intergenic | 35.0% |
| TGTTGGAGCAATCTTCTTAA+GGG | - | chr1_1:9392292-9392311 | None:intergenic | 35.0% | |
| ATGTTGGAGCAATCTTCTTA+AGG | - | chr1_1:9392293-9392312 | None:intergenic | 35.0% | |
| TTAAGAAGATTGCTCCAACA+TGG | + | chr1_1:9392292-9392311 | Msa0006480:CDS | 35.0% | |
| AAGGAAACATTCATCCATGT+TGG | - | chr1_1:9392309-9392328 | None:intergenic | 35.0% | |
| AACATGGATGAATGTTTCCT+TGG | + | chr1_1:9392308-9392327 | Msa0006480:CDS | 35.0% | |
| ! | AAACCGATAAAGCTTTTGGA+TGG | + | chr1_1:9392349-9392368 | Msa0006480:CDS | 35.0% |
| ! | AACCGATAAAGCTTTTGGAT+GGG | + | chr1_1:9392350-9392369 | Msa0006480:CDS | 35.0% |
| GTGTTATCAAGGTTCTCATA+TGG | + | chr1_1:9392583-9392602 | Msa0006480:intron | 35.0% | |
| AAGCGATAGGTAGAAATCAA+TGG | - | chr1_1:9392632-9392651 | None:intergenic | 35.0% | |
| ACTGCAAATCACTCATGTTT+GGG | - | chr1_1:9393164-9393183 | None:intergenic | 35.0% | |
| AGCGGAAGACTCTTTATATA+GGG | - | chr1_1:9393459-9393478 | None:intergenic | 35.0% | |
| GAAAAAACGAGAGAGATATG+TGG | - | chr1_1:9393507-9393526 | None:intergenic | 35.0% | |
| !! | CTTTTTGGTCCTGTTACTAT+AGG | + | chr1_1:9393566-9393585 | Msa0006480:intron | 35.0% |
| ATAATAGATCGGTACCTTCA+TGG | - | chr1_1:9393867-9393886 | None:intergenic | 35.0% | |
| ATGGAAAAATTGGAGAATGG+AGG | + | chr1_1:9393990-9394009 | Msa0006480:CDS | 35.0% | |
| ATGAAACATACCACACTTTC+CGG | - | chr1_1:9394079-9394098 | None:intergenic | 35.0% | |
| !!! | TGTTGGTTTTGTTTTTTGGG+AGG | + | chr1_1:9394153-9394172 | Msa0006480:intron | 35.0% |
| !!! | GTTGGTTTTGTTTTTTGGGA+GGG | + | chr1_1:9394154-9394173 | Msa0006480:intron | 35.0% |
| !!! | TTGGTTTTGTTTTTTGGGAG+GGG | + | chr1_1:9394155-9394174 | Msa0006480:intron | 35.0% |
| AGAGTTTAGATCAGAAAGGA+GGG | + | chr1_1:9394242-9394261 | Msa0006480:intron | 35.0% | |
| GTTATGAGGATAAAGACTAG+AGG | + | chr1_1:9394268-9394287 | Msa0006480:intron | 35.0% | |
| AGGATAAAGACTAGAGGATA+GGG | + | chr1_1:9394274-9394293 | Msa0006480:intron | 35.0% | |
| TCTACGTATTATAGAGAGAG+AGG | - | chr1_1:9394423-9394442 | None:intergenic | 35.0% | |
| ! | GATTGGTCATACAGATTAGT+TGG | + | chr1_1:9394509-9394528 | Msa0006480:intron | 35.0% |
| ! | CTATGGATCCCTTGATTTTA+AGG | + | chr1_1:9394781-9394800 | Msa0006480:intron | 35.0% |
| TCAAAACAAGAAGAGCTTGA+AGG | - | chr1_1:9394938-9394957 | None:intergenic | 35.0% | |
| TGCTTGGTAAAAATGTGTTG+TGG | + | chr1_1:9395221-9395240 | Msa0006480:three_prime_UTR | 35.0% | |
| GACGAGTTTACGTTCAAATT+TGG | + | chr1_1:9395311-9395330 | Msa0006480:three_prime_UTR | 35.0% | |
| TACGTTCAAATTTGGTACCT+CGG | + | chr1_1:9395319-9395338 | Msa0006480:three_prime_UTR | 35.0% | |
| CCAGGAAAATCTTGTCTCAA+AGG | - | chr1_1:9390391-9390410 | None:intergenic | 40.0% | |
| !!! | CCTTTGAGACAAGATTTTCC+TGG | + | chr1_1:9390388-9390407 | Msa0006480:CDS | 40.0% |
| ! | GAAAGTGGTGATGACAATTC+TGG | + | chr1_1:9390577-9390596 | Msa0006480:CDS | 40.0% |
| ! | TGGTGATGACAATTCTGGTA+TGG | + | chr1_1:9390582-9390601 | Msa0006480:CDS | 40.0% |
| GGTGATGACAATTCTGGTAT+GGG | + | chr1_1:9390583-9390602 | Msa0006480:CDS | 40.0% | |
| ! | TCGGAAAGTGTACTTGATCT+TGG | + | chr1_1:9390778-9390797 | Msa0006480:intron | 40.0% |
| GACTATATTGTGAGTGAGGT+AGG | + | chr1_1:9391115-9391134 | Msa0006480:intron | 40.0% | |
| AGTGAGGTAGGTAGATTGTT+AGG | + | chr1_1:9391127-9391146 | Msa0006480:intron | 40.0% | |
| GTGAGGTAGGTAGATTGTTA+GGG | + | chr1_1:9391128-9391147 | Msa0006480:intron | 40.0% | |
| GGCTTGGATGTTGTTGTAAA+CGG | - | chr1_1:9391283-9391302 | None:intergenic | 40.0% | |
| CCCCACTTAATGGGATAATA+AGG | - | chr1_1:9391304-9391323 | None:intergenic | 40.0% | |
| ATTATCCCATTAAGTGGGGT+CGG | + | chr1_1:9391305-9391324 | Msa0006480:intron | 40.0% | |
| TCCCTAAAACAGTGGATATC+AGG | + | chr1_1:9391404-9391423 | Msa0006480:intron | 40.0% | |
| ! | GCCTGATATCCACTGTTTTA+GGG | - | chr1_1:9391408-9391427 | None:intergenic | 40.0% |
| ! | TGCCTGATATCCACTGTTTT+AGG | - | chr1_1:9391409-9391428 | None:intergenic | 40.0% |
| CGGAGGAACTAATTTGATTG+AGG | + | chr1_1:9391533-9391552 | Msa0006480:intron | 40.0% | |
| AGTTGTAGGGTAGGTCAAAT+TGG | - | chr1_1:9391603-9391622 | None:intergenic | 40.0% | |
| ACAATGTAACCCTGCCATAA+AGG | - | chr1_1:9391683-9391702 | None:intergenic | 40.0% | |
| CAAATGCCCATGGTCTATTA+AGG | - | chr1_1:9391706-9391725 | None:intergenic | 40.0% | |
| ATTCCATCTCTGGCTAAGTT+GGG | - | chr1_1:9391895-9391914 | None:intergenic | 40.0% | |
| AACTTAGCCAGAGATGGAAT+GGG | + | chr1_1:9391895-9391914 | Msa0006480:CDS | 40.0% | |
| TTCACCTGTAATTGTTGGCA+AGG | + | chr1_1:9392026-9392045 | Msa0006480:CDS | 40.0% | |
| GATACCTTGCCAACAATTAC+AGG | - | chr1_1:9392033-9392052 | None:intergenic | 40.0% | |
| TGTTTCCTTGGCAATGAAGA+AGG | + | chr1_1:9392320-9392339 | Msa0006480:CDS | 40.0% | |
| !! | CCAAAAGCTTTATCGGTTTC+AGG | - | chr1_1:9392348-9392367 | None:intergenic | 40.0% |
| ! | CCTGAAACCGATAAAGCTTT+TGG | + | chr1_1:9392345-9392364 | Msa0006480:CDS | 40.0% |
| ! | CACCCATCCAAAAGCTTTAT+CGG | - | chr1_1:9392355-9392374 | None:intergenic | 40.0% |
| AAGTTGTTGTGAGGCTAAGA+AGG | - | chr1_1:9392418-9392437 | None:intergenic | 40.0% | |
| ACACAAGGACTTCATGATTC+AGG | + | chr1_1:9392518-9392537 | Msa0006480:CDS | 40.0% | |
| TACTGTCGTGTGTGTTATCA+AGG | + | chr1_1:9392572-9392591 | Msa0006480:intron | 40.0% | |
| ACACGACTTCAAGTAAAGCA+CGG | + | chr1_1:9392728-9392747 | Msa0006480:intron | 40.0% | |
| GGATTTCAAATGTCCTGCAT+AGG | + | chr1_1:9392782-9392801 | Msa0006480:intron | 40.0% | |
| AGTATATCAAGTGTGGTGAG+TGG | + | chr1_1:9392831-9392850 | Msa0006480:intron | 40.0% | |
| ! | CAACTGTCCAATACTTGTTG+TGG | - | chr1_1:9393063-9393082 | None:intergenic | 40.0% |
| CACTGCAAATCACTCATGTT+TGG | - | chr1_1:9393165-9393184 | None:intergenic | 40.0% | |
| ! | CAAACATGAGTGATTTGCAG+TGG | + | chr1_1:9393163-9393182 | Msa0006480:intron | 40.0% |
| GTGACATCTCATCAACAAAG+CGG | + | chr1_1:9393206-9393225 | Msa0006480:intron | 40.0% | |
| GCGGAAGACTCTTTATATAG+GGG | - | chr1_1:9393458-9393477 | None:intergenic | 40.0% | |
| CAGCGGAAGACTCTTTATAT+AGG | - | chr1_1:9393460-9393479 | None:intergenic | 40.0% | |
| GTGTGTTATGAACTACACAG+CGG | - | chr1_1:9393477-9393496 | None:intergenic | 40.0% | |
| TACGCGATTCCTATAGTAAC+AGG | - | chr1_1:9393578-9393597 | None:intergenic | 40.0% | |
| ATTATGTATGTCAGCCACCA+TGG | + | chr1_1:9393786-9393805 | Msa0006480:intron | 40.0% | |
| TTATGTATGTCAGCCACCAT+GGG | + | chr1_1:9393787-9393806 | Msa0006480:intron | 40.0% | |
| AATCAGGGTGAACTGACATA+TGG | + | chr1_1:9393971-9393990 | Msa0006480:intron | 40.0% | |
| !!! | GGTGGCAATGTCAGATTTTT+TGG | - | chr1_1:9394046-9394065 | None:intergenic | 40.0% |
| AAGTAACCACACTAACACGA+AGG | - | chr1_1:9394105-9394124 | None:intergenic | 40.0% | |
| !!! | TGGTTTTGTTTTTTGGGAGG+GGG | + | chr1_1:9394156-9394175 | Msa0006480:intron | 40.0% |
| GAGAGTTTAGATCAGAAAGG+AGG | + | chr1_1:9394241-9394260 | Msa0006480:intron | 40.0% | |
| GAGTTTAGATCAGAAAGGAG+GGG | + | chr1_1:9394243-9394262 | Msa0006480:intron | 40.0% | |
| AGTTTAGATCAGAAAGGAGG+GGG | + | chr1_1:9394244-9394263 | Msa0006480:intron | 40.0% | |
| GAGGATAAAGACTAGAGGAT+AGG | + | chr1_1:9394273-9394292 | Msa0006480:intron | 40.0% | |
| TAAAGACTAGAGGATAGGGA+AGG | + | chr1_1:9394278-9394297 | Msa0006480:intron | 40.0% | |
| TAGAGGATAGGGAAGGATAA+TGG | + | chr1_1:9394285-9394304 | Msa0006480:intron | 40.0% | |
| CAATCTCAAAATCCACTTGC+AGG | - | chr1_1:9394494-9394513 | None:intergenic | 40.0% | |
| !!! | CTGCAAGTGGATTTTGAGAT+TGG | + | chr1_1:9394492-9394511 | Msa0006480:intron | 40.0% |
| ! | AGATTAGTTGGTCCTTGAAC+CGG | + | chr1_1:9394521-9394540 | Msa0006480:intron | 40.0% |
| AAAACTCAGTATCCGGTTCA+AGG | - | chr1_1:9394536-9394555 | None:intergenic | 40.0% | |
| TTGTGCTAGGAGGAACAAAA+GGG | - | chr1_1:9394595-9394614 | None:intergenic | 40.0% | |
| TTTGTGCTAGGAGGAACAAA+AGG | - | chr1_1:9394596-9394615 | None:intergenic | 40.0% | |
| !! | TGTGTACTAGTCTTTGTGCT+AGG | - | chr1_1:9394608-9394627 | None:intergenic | 40.0% |
| TTACTCAAATTGGTTGGGCT+CGG | - | chr1_1:9394648-9394667 | None:intergenic | 40.0% | |
| TGAGCCAATTGTTCCTATTC+AGG | - | chr1_1:9394843-9394862 | None:intergenic | 40.0% | |
| TCACTAGAGTCACCTAGAAA+AGG | - | chr1_1:9395014-9395033 | None:intergenic | 40.0% | |
| CTAGGTGACTCTAGTGAAAA+TGG | + | chr1_1:9395017-9395036 | Msa0006480:intron | 40.0% | |
| TATTCCGAACTGGTCATCAT+AGG | + | chr1_1:9395059-9395078 | Msa0006480:CDS | 40.0% | |
| ATTCCGAACTGGTCATCATA+GGG | + | chr1_1:9395060-9395079 | Msa0006480:CDS | 40.0% | |
| TTACAGTGTGATCAGAATGC+AGG | + | chr1_1:9395097-9395116 | Msa0006480:three_prime_UTR | 40.0% | |
| TACAGTGTGATCAGAATGCA+GGG | + | chr1_1:9395098-9395117 | Msa0006480:three_prime_UTR | 40.0% | |
| TGATGCCAATCTGTGACAAA+TGG | - | chr1_1:9395132-9395151 | None:intergenic | 40.0% | |
| TGTAGATGACTTTACACCTG+AGG | + | chr1_1:9395179-9395198 | Msa0006480:three_prime_UTR | 40.0% | |
| GATGACAATTCTGGTATGGG+TGG | + | chr1_1:9390586-9390605 | Msa0006480:CDS | 45.0% | |
| ! | CTGGTATGGGTGGATTTACT+AGG | + | chr1_1:9390596-9390615 | Msa0006480:CDS | 45.0% |
| ! | TCAACCTTTGCCTTCTGGAA+TGG | + | chr1_1:9390675-9390694 | Msa0006480:CDS | 45.0% |
| TGATCCATTCCAGAAGGCAA+AGG | - | chr1_1:9390682-9390701 | None:intergenic | 45.0% | |
| !! | TTTGCCTTCTGGAATGGATC+AGG | + | chr1_1:9390681-9390700 | Msa0006480:CDS | 45.0% |
| AGAACCTGATCCATTCCAGA+AGG | - | chr1_1:9390688-9390707 | None:intergenic | 45.0% | |
| !! | ATTCTTTGAAATTGGCGCGG+AGG | + | chr1_1:9391516-9391535 | Msa0006480:intron | 45.0% |
| TTGACCTACCCTACAACTTG+AGG | + | chr1_1:9391605-9391624 | Msa0006480:intron | 45.0% | |
| ! | TTGTCCTCAAGTTGTAGGGT+AGG | - | chr1_1:9391612-9391631 | None:intergenic | 45.0% |
| ! | TCTCTGGCTAAGTTGGGTAT+AGG | - | chr1_1:9391889-9391908 | None:intergenic | 45.0% |
| ATACCCAACTTAGCCAGAGA+TGG | + | chr1_1:9391889-9391908 | Msa0006480:CDS | 45.0% | |
| CATTCCATCTCTGGCTAAGT+TGG | - | chr1_1:9391896-9391915 | None:intergenic | 45.0% | |
| CAACTTAGCCAGAGATGGAA+TGG | + | chr1_1:9391894-9391913 | Msa0006480:CDS | 45.0% | |
| AAGTACTACCCTGAGGAGAA+CGG | + | chr1_1:9391973-9391992 | Msa0006480:CDS | 45.0% | |
| AGGATCCTTCTTCATTGCCA+AGG | - | chr1_1:9392328-9392347 | None:intergenic | 45.0% | |
| ACCATGAAGAGCAGACGAAA+CGG | - | chr1_1:9392484-9392503 | None:intergenic | 45.0% | |
| CTTGTGCAGCCATTTAGTCA+AGG | + | chr1_1:9392761-9392780 | Msa0006480:intron | 45.0% | |
| CTAACACTTAAGGCCTATGC+AGG | - | chr1_1:9392798-9392817 | None:intergenic | 45.0% | |
| GTCATGAGTATTCGTGTGTG+AGG | - | chr1_1:9392959-9392978 | None:intergenic | 45.0% | |
| CACACACGAATACTCATGAC+AGG | + | chr1_1:9392959-9392978 | Msa0006480:intron | 45.0% | |
| ! | ATGAGTGATTTGCAGTGGCA+AGG | + | chr1_1:9393168-9393187 | Msa0006480:intron | 45.0% |
| ! | TGATTTGCAGTGGCAAGGAA+TGG | + | chr1_1:9393173-9393192 | Msa0006480:intron | 45.0% |
| GATTTGCAGTGGCAAGGAAT+GGG | + | chr1_1:9393174-9393193 | Msa0006480:intron | 45.0% | |
| TTGCCAAGTTCTTTGTCCCA+TGG | - | chr1_1:9393806-9393825 | None:intergenic | 45.0% | |
| TGGGTGTGACTATTCCATGA+AGG | + | chr1_1:9393850-9393869 | Msa0006480:CDS | 45.0% | |
| CATCTTCCTTCGTGTTAGTG+TGG | + | chr1_1:9394096-9394115 | Msa0006480:intron | 45.0% | |
| !!! | GGTTTTGTTTTTTGGGAGGG+GGG | + | chr1_1:9394157-9394176 | Msa0006480:intron | 45.0% |
| !!! | GGTGAGTGTTTTTGGAAGAG+AGG | - | chr1_1:9394473-9394492 | None:intergenic | 45.0% |
| ! | CACTTGCAGGTGAGTGTTTT+TGG | - | chr1_1:9394481-9394500 | None:intergenic | 45.0% |
| CAAAAACACTCACCTGCAAG+TGG | + | chr1_1:9394479-9394498 | Msa0006480:intron | 45.0% | |
| TGTGCTAGGAGGAACAAAAG+GGG | - | chr1_1:9394594-9394613 | None:intergenic | 45.0% | |
| !! | GTACTAGTCTTTGTGCTAGG+AGG | - | chr1_1:9394605-9394624 | None:intergenic | 45.0% |
| TACTCAAATTGGTTGGGCTC+GGG | - | chr1_1:9394647-9394666 | None:intergenic | 45.0% | |
| ACTGTTTGGGAGAGTTGCTA+TGG | + | chr1_1:9394764-9394783 | Msa0006480:intron | 45.0% | |
| AGCTTGAAGGAAACGTGTGA+TGG | - | chr1_1:9394925-9394944 | None:intergenic | 45.0% | |
| ! | CCAGTTCGGAATATTTGCTG+CGG | - | chr1_1:9395052-9395071 | None:intergenic | 45.0% |
| AAGCCCTATGATGACCAGTT+CGG | - | chr1_1:9395066-9395085 | None:intergenic | 45.0% | |
| GTCATCATAGGGCTTTCTAC+AGG | + | chr1_1:9395071-9395090 | Msa0006480:exon | 45.0% | |
| ATCATAGGGCTTTCTACAGG+TGG | + | chr1_1:9395074-9395093 | Msa0006480:exon | 45.0% | |
| !!! | TTTTATATATTTATTTTTTC+TGG | + | chr1_1:9390731-9390750 | Msa0006480:intron | 5.0% |
| !!! | TTTATATATTTATTTTTTCT+GGG | + | chr1_1:9390732-9390751 | Msa0006480:intron | 5.0% |
| !! | TAAAATAAAATATTTCAATA+TGG | - | chr1_1:9395265-9395284 | None:intergenic | 5.0% |
| AGGCGGCTATATGAAAGGGT+TGG | - | chr1_1:9390204-9390223 | None:intergenic | 50.0% | |
| GATGGTTTACGTGAAGGACC+AGG | - | chr1_1:9390409-9390428 | None:intergenic | 50.0% | |
| GTTGCTCAACCTTTGCCTTC+TGG | + | chr1_1:9390670-9390689 | Msa0006480:CDS | 50.0% | |
| TGTAGCCGACCCCACTTAAT+GGG | - | chr1_1:9391313-9391332 | None:intergenic | 50.0% | |
| ATGTAGCCGACCCCACTTAA+TGG | - | chr1_1:9391314-9391333 | None:intergenic | 50.0% | |
| GACCATGGGCATTTGTACAG+TGG | + | chr1_1:9391711-9391730 | Msa0006480:CDS | 50.0% | |
| AGCCACTGTACAAATGCCCA+TGG | - | chr1_1:9391716-9391735 | None:intergenic | 50.0% | |
| !! | GCTGAGAAAGTACTACCCTG+AGG | + | chr1_1:9391966-9391985 | Msa0006480:CDS | 50.0% |
| TTACAGGTCCGTTCTCCTCA+GGG | - | chr1_1:9391984-9392003 | None:intergenic | 50.0% | |
| TCGTCTGCTCTTCATGGTGT+TGG | + | chr1_1:9392486-9392505 | Msa0006480:CDS | 50.0% | |
| GTGGTGAGTGGTGATTCTAG+AGG | + | chr1_1:9392843-9392862 | Msa0006480:intron | 50.0% | |
| CCAAGTTCTTTGTCCCATGG+TGG | - | chr1_1:9393803-9393822 | None:intergenic | 50.0% | |
| CCACCATGGGACAAAGAACT+TGG | + | chr1_1:9393800-9393819 | Msa0006480:CDS | 50.0% | |
| AATCTGACATTGCCACCACC+TGG | + | chr1_1:9394049-9394068 | Msa0006480:CDS | 50.0% | |
| AGAAAGGAGGGGGAGTTATG+AGG | + | chr1_1:9394254-9394273 | Msa0006480:intron | 50.0% | |
| GTGCTAGGAGGAACAAAAGG+GGG | - | chr1_1:9394593-9394612 | None:intergenic | 50.0% | |
| CCGCAGCAAATATTCCGAAC+TGG | + | chr1_1:9395049-9395068 | Msa0006480:CDS | 50.0% | |
| !! | GCGTGCCATTTGTCACAGAT+TGG | + | chr1_1:9395124-9395143 | Msa0006480:three_prime_UTR | 50.0% |
| TGCAGCTCCCATTCCATCTC+TGG | - | chr1_1:9391905-9391924 | None:intergenic | 55.0% | |
| GTTACAGGTCCGTTCTCCTC+AGG | - | chr1_1:9391985-9392004 | None:intergenic | 55.0% | |
| GCCGTTTCGTCTGCTCTTCA+TGG | + | chr1_1:9392480-9392499 | Msa0006480:CDS | 55.0% | |
| ATTGCCACCACCTGGTGTTC+CGG | + | chr1_1:9394057-9394076 | Msa0006480:CDS | 55.0% | |
| ACACTTTCCGGAACACCAGG+TGG | - | chr1_1:9394067-9394086 | None:intergenic | 55.0% | |
| ACCTGGTGTTCCGGAAAGTG+TGG | + | chr1_1:9394066-9394085 | Msa0006480:CDS | 55.0% | |
| ACCACACTTTCCGGAACACC+AGG | - | chr1_1:9394070-9394089 | None:intergenic | 55.0% | |
| !!! | TTTTTGGGAGGGGGGTGTTC+TGG | + | chr1_1:9394165-9394184 | Msa0006480:intron | 55.0% |
| CTAGGAGGAACAAAAGGGGG+AGG | - | chr1_1:9394590-9394609 | None:intergenic | 55.0% | |
| CAAATTGGTTGGGCTCGGGT+TGG | - | chr1_1:9394643-9394662 | None:intergenic | 55.0% | |
| CTTTCCGGAACACCAGGTGG+TGG | - | chr1_1:9394064-9394083 | None:intergenic | 60.0% | |
| !! | ATTGGTTGGGCTCGGGTTGG+TGG | - | chr1_1:9394640-9394659 | None:intergenic | 60.0% |
| !! | TTGGGCTCGGGTTGGTGGCG+GGG | - | chr1_1:9394635-9394654 | None:intergenic | 70.0% |
| !! | GTTGGGCTCGGGTTGGTGGC+GGG | - | chr1_1:9394636-9394655 | None:intergenic | 70.0% |
| !! | GGTTGGGCTCGGGTTGGTGG+CGG | - | chr1_1:9394637-9394656 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 9390135 | 9395457 | 9390135 | ID=Msa0006480;Name=Msa0006480 |
| chr1_1 | mRNA | 9390135 | 9395457 | 9390135 | ID=Msa0006480-mRNA-1;Parent=Msa0006480;Name=Msa0006480-mRNA-1;_AED=0.08;_eAED=0.08;_QI=166|1|1|1|1|1|8|377|360 |
| chr1_1 | exon | 9390135 | 9390702 | 9390135 | ID=Msa0006480-mRNA-1:exon:3358;Parent=Msa0006480-mRNA-1 |
| chr1_1 | exon | 9391692 | 9391759 | 9391692 | ID=Msa0006480-mRNA-1:exon:3359;Parent=Msa0006480-mRNA-1 |
| chr1_1 | exon | 9391846 | 9392047 | 9391846 | ID=Msa0006480-mRNA-1:exon:3360;Parent=Msa0006480-mRNA-1 |
| chr1_1 | exon | 9392285 | 9392382 | 9392285 | ID=Msa0006480-mRNA-1:exon:3361;Parent=Msa0006480-mRNA-1 |
| chr1_1 | exon | 9392470 | 9392539 | 9392470 | ID=Msa0006480-mRNA-1:exon:3362;Parent=Msa0006480-mRNA-1 |
| chr1_1 | exon | 9393800 | 9393871 | 9393800 | ID=Msa0006480-mRNA-1:exon:3363;Parent=Msa0006480-mRNA-1 |
| chr1_1 | exon | 9393977 | 9394087 | 9393977 | ID=Msa0006480-mRNA-1:exon:3364;Parent=Msa0006480-mRNA-1 |
| chr1_1 | exon | 9395021 | 9395457 | 9395021 | ID=Msa0006480-mRNA-1:exon:3365;Parent=Msa0006480-mRNA-1 |
| chr1_1 | five_prime_UTR | 9390135 | 9390300 | 9390135 | ID=Msa0006480-mRNA-1:five_prime_utr;Parent=Msa0006480-mRNA-1 |
| chr1_1 | CDS | 9390301 | 9390702 | 9390301 | ID=Msa0006480-mRNA-1:cds;Parent=Msa0006480-mRNA-1 |
| chr1_1 | CDS | 9391692 | 9391759 | 9391692 | ID=Msa0006480-mRNA-1:cds;Parent=Msa0006480-mRNA-1 |
| chr1_1 | CDS | 9391846 | 9392047 | 9391846 | ID=Msa0006480-mRNA-1:cds;Parent=Msa0006480-mRNA-1 |
| chr1_1 | CDS | 9392285 | 9392382 | 9392285 | ID=Msa0006480-mRNA-1:cds;Parent=Msa0006480-mRNA-1 |
| chr1_1 | CDS | 9392470 | 9392539 | 9392470 | ID=Msa0006480-mRNA-1:cds;Parent=Msa0006480-mRNA-1 |
| chr1_1 | CDS | 9393800 | 9393871 | 9393800 | ID=Msa0006480-mRNA-1:cds;Parent=Msa0006480-mRNA-1 |
| chr1_1 | CDS | 9393977 | 9394087 | 9393977 | ID=Msa0006480-mRNA-1:cds;Parent=Msa0006480-mRNA-1 |
| chr1_1 | CDS | 9395021 | 9395080 | 9395021 | ID=Msa0006480-mRNA-1:cds;Parent=Msa0006480-mRNA-1 |
| chr1_1 | three_prime_UTR | 9395081 | 9395457 | 9395081 | ID=Msa0006480-mRNA-1:three_prime_utr;Parent=Msa0006480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
